CsGy4G024670 (gene) Cucumber (Gy14) v2.1

Overview
NameCsGy4G024670
Typegene
OrganismCucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
DescriptionUnknown protein
LocationGy14Chr4: 30331367 .. 30334992 (-)
RNA-Seq ExpressionCsGy4G024670
SyntenyCsGy4G024670
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTCTGTTGAAGAAGGTGCAAGCCAAGCTTGTGGAAGAAGTGCGCTGTTCTCTCTGTAATTCCTTTCTTCAACCTTGATTTTGTGCGTGTAGATTTTGTAATGATCAACTATTGAATATATTTTTCATCCTTCTACATTTTACAGGTTAGCCTTGGACTTGGAATTGTGCTGTACTCTTGCTGAAGGGATGATCTCATCTGCACTGAAGAGTGAAAGTTGGCATTAGAAATGTCAAAACTTTTGTTTATCAGAGCTGCTATGAGGAAGATATTAACTAGCTTGCAGAATAAGTGGTAAGTGAGATCCAAGTGTCTCTCTTTTGGGATTATAGTTATGCATTGCTTTTAATTTGTTTCGATTTCTTAAATACACGCACTCTTTTCCCTCTAAATTCGGAAGTAACATTTCTGTATAAACTTCATTAGGCTAGTTTTTGGGATCGGATTTCCTTACCCTTTACTTTCCAGCCCGAGAAGCTTTCAATTTCTAGAAATGGACATCCCTCTATTCATATCATTACCAGTTTCAAGCACGACAAGGGAGTAGTTGAGCTCGATTCTTACTTTTTGGACAGCTCTAAAGGATGTTTGGATACCCATATTTGTATTGGAATAGAATGTAATGTAATAAAAAGATTCATGTTTCGATTGAGCCTTTTGAGCCCAAATTGTTATTAAATACTTATTTTGTTTCAGCAGTTTTCAACTAAACCCTATTTCCCACCGTTTTCACACTTTACAATCACATTTTTTTACCACCCTCGATTCGACAAGTATTCTAACACCTCTCTGATTGGTAGTAATCCTGATTATATTCCACTTCACCGAACACTCCTCTAATGTTTGATGTATTTCTTTTTACTCTCTAGACAACAGGATAAATCACACCCTCGTGTTGTACCATTGCTCAAAGGAACTTAAGTAATTCACTAAATCATAATTTCTTCATGTTTCCCTTCCCTCTCCCATTAGATTTTCAATATATCTTCTTTCCAAAACACCGAGAAGAAAGAACCATATCTATAGTCATAAACATCTTTCATTTCCCTACAAAGTCTTTTCTTTCTTCATGTCCCACAATACCATAAATGTTTTTTTTTTAATAGACAATACCATAAATGTTGGTCCTTCGTTTAAGACCAGTATTTTTTTGTTGATTGCTGTAATTATTATCACCCAATCATCGCGGTGACCTTGCTTTGGAGAGAACAATTTGTTGGTCCTAGCTAATACTAGAAGTTTCCATCATTTTGTGTGGGCTAAACACTTTCAGTCTTCAAAGATAAATACATAATTTAGGACTTCGAACCAGGGATCATTTCACTCAACTGCCTCTACAGCTTGTTAGCAGTGGCATTTACTTAAGAGAGCTGATTGACAAGAGAATGTACCCAGGCTATAGAATATCTTAATCAAATAGTCGTAGTTCTAGTTTCGATTAAGGGTCACACACCTGACTTTCATAGTGAAATGAGATGTATTTGACTGAGTACTCGGGGAAAAAGGTTAAATTATATAAGAATTACCATTGAATTTTGTCACTTGTTTATCTCCCTTGAACTTTCTAAAGCATCTGAAAATGTGTTAGGAGTATAATTTTTTAGAATTTTGGACTGAGATTGAGACATGAAATAGTGTTAGTGACTTGGAATGAAAATTTAGATTGCTTCATCGTTTAGGTCTTGTTGGCGTACATAGTTCTAAGTCTATTTCTATATGAAATTTCCAAGGATTTTTATTTCAATGGTAGTTTTGAAACATTTATGAAAGTTGTGGGAGTAATATAGCAACTTTTTGAACAACGGAAGAGATTTTGCTCAGACTTAAAAGAATGGTTATGTTATTGTTGACTTTCTAATTTAGATTTCATAGGGAAGGGCTGAAATACTCAAATGAATCCATGAATATGATTTATGAACATGTGTGTTTCTCTTGAAATGATTTGTTCGTCGAGAAAATTTTACAGGAGGAAGTGCTGTTTATGGACAATTGGATAGCGCAAAGGAACCGAAAGTAAAATCCTTAGGAGGGAAAGACGATAGGTGCACCGAAAGTTGTCGACATTATAAAATGAAGGTGGAAGAGAAGGTAAATGTTCATTGTTTTCTTCCTATTTTTTTTATAATTTGTATAAAGTTGAATATTTAGCCAACTTAGACATAAAGATGAAAGGCTCAATTTTTCAGCCTTACGAGTGGTTGATATAAGAAAAGAAAAATATCATTAAAAAGAACAAAAAAAAAAAATATATATATATTTATAAAGTTGAATCTTGATTAAATAACCTGGCTGGTTTTTCTGCTTTTGAAGGAAATCATAGGAGTAAATTAGTAATTGTTTGTGGTTGGACCTTGGTGGGTTAGCTTGACTTTTGATGCAAATAAAAAGTGGAGGTATGCATTGGTTGGTCAGTTGGTGTCGATTTTTTTTTACCAAATCGTCACTGAACCAACTATGGCCAGTTTAATAAATGTTCAAAACGACATCGATCATTAAGGATATTGATCGATCGACTTCAGTTTGATCAGACAGCTCAATATTTTAATCGATCATGTACACTCTTGATGAAAATTACCTTTCAGCAATCAAAAGGTAATTTAGAGTTTATACGGATTTTTAAAAAAAATATTTAAACCCAAATGCTTCAAGTCTCTCCCTGAAGATACTACATAATAAGTAATTTATCACACTCGATGTTAGGTATGAGGTATGTTAGGTACTGTGAAAGTGTTTTTTTTTTAAATAGTGCTTAGGTGTATCTGTCTAGGTGAACTAGATATTATAAGAGTAGAACATATATATAGTCTATTTAATTAGGAGATGACTTAAAAGTATGAAACATTCAATTATTTTATAACCTAAAAGGCGTTTAGATTGAAGAAATGAACATAACTAAACGATGAATATACTCTTTCTTTTGAAATAAAGAATAAAAATTTCTTTTAACAGCCTTTGGAAGGGGAAGGGCTAGCTTGTGATGAAGGTACATCATTTGGGCTCAGCCCATGAAAGTATTGTCCTAAGGAGAGGGTAAAGAAATGATCGTGTGATTGGAAGGAAAGGAAAGGAAAAGAAAGGTCAGTCTTAAATGAATTAATGATTATTGATTAGTATTTCTTTAATAGATATTTTGGTCGGGATTCGTTGACTTTGAATGTTTTTGTACTAAATTGACATTTTGAAATGCCCCCATGATTTGGCTAAAGAAATAGCACAACAACTATTGCTTTTGGTTGTGGTGGTTTCTTTAGAATTTAGTGTCCTTGTTGCTCCACTAAACCAAATGTGACCATTTATATTTCTTTGGTTATTAAAAAGGTTTTAGTTGGATGGTTAGTGTAGCTTATTTCATCATTACTTTCCTTATTTTTCTTGTTTTTTTTCTCAAAGATTGAGTGACTAGGAATCCTTTGTTCTACACCTTTTTCAGACATATGGCCCCTCCTATATTTTTTGGTGGTCCAGTTTGATTTTTCTATTTTGATAATAAGATTATGAAACCCATCATGAATTGGCTAGAAGGGAGGGTCAGTCAAGTGCTACCTACCTAGAATTTAATATTCTATCAATTTTCTCAACGCCAAATATAGGAGGATCAAATAGGTTGTTGTGTAGACGTGCATAA

mRNA sequence

ATGTCTGTTGAAGAAGGTGCAAGCCAAGCTTGTGGAAGAAGTGCGCTGTTCTCTCTGTTAGCCTTGGACTTGGAATTGTGCTGTACTCTTGCTGAAGGGATGATCTCATCTGCACTGAAGAGTGAAAACAATACCATAAATGTTGGTCCTTCGTTTAAGACCAGAGGAAGTGCTGTTTATGGACAATTGGATAGCGCAAAGGAACCGAAAGTAAAATCCTTAGGAGGGAAAGACGATAGGTGCACCGAAAGTTGTCGACATTATAAAATGAAGGTGGAAGAGAAGCCTTTGGAAGGGGAAGGGCTAGCTTGTGATGAAGATTATGAAACCCATCATGAATTGGCTAGAAGGGAGGGTCAGTCAAGTGCTACCTACCTAGAATTTAATATTCTATCAATTTTCTCAACGCCAAATATAGGAGGATCAAATAGGTTGTTGTGTAGACGTGCATAA

Coding sequence (CDS)

ATGTCTGTTGAAGAAGGTGCAAGCCAAGCTTGTGGAAGAAGTGCGCTGTTCTCTCTGTTAGCCTTGGACTTGGAATTGTGCTGTACTCTTGCTGAAGGGATGATCTCATCTGCACTGAAGAGTGAAAACAATACCATAAATGTTGGTCCTTCGTTTAAGACCAGAGGAAGTGCTGTTTATGGACAATTGGATAGCGCAAAGGAACCGAAAGTAAAATCCTTAGGAGGGAAAGACGATAGGTGCACCGAAAGTTGTCGACATTATAAAATGAAGGTGGAAGAGAAGCCTTTGGAAGGGGAAGGGCTAGCTTGTGATGAAGATTATGAAACCCATCATGAATTGGCTAGAAGGGAGGGTCAGTCAAGTGCTACCTACCTAGAATTTAATATTCTATCAATTTTCTCAACGCCAAATATAGGAGGATCAAATAGGTTGTTGTGTAGACGTGCATAA

Protein sequence

MSVEEGASQACGRSALFSLLALDLELCCTLAEGMISSALKSENNTINVGPSFKTRGSAVYGQLDSAKEPKVKSLGGKDDRCTESCRHYKMKVEEKPLEGEGLACDEDYETHHELARREGQSSATYLEFNILSIFSTPNIGGSNRLLCRRA*
Homology
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BLAST of CsGy4G024670 vs. NCBI nr
Match: KAE8649942.1 (hypothetical protein Csa_011932 [Cucumis sativus])

HSP 1 Score: 239 bits (611), Expect = 2.51e-78
Identity = 119/119 (100.00%), Postives = 119/119 (100.00%), Query Frame = 0 

Query: 1   MSVEEGASQACGRSALFSLLALDLELCCTLAEGMISSALKSENNTINVGPSFKTRGSAVY 60
           MSVEEGASQACGRSALFSLLALDLELCCTLAEGMISSALKSENNTINVGPSFKTRGSAVY
Sbjct: 1   MSVEEGASQACGRSALFSLLALDLELCCTLAEGMISSALKSENNTINVGPSFKTRGSAVY 60

Query: 61  GQLDSAKEPKVKSLGGKDDRCTESCRHYKMKVEEKPLEGEGLACDEDYETHHELARREG 119
           GQLDSAKEPKVKSLGGKDDRCTESCRHYKMKVEEKPLEGEGLACDEDYETHHELARREG
Sbjct: 61  GQLDSAKEPKVKSLGGKDDRCTESCRHYKMKVEEKPLEGEGLACDEDYETHHELARREG 119

The following BLAST results are available for this feature:
BLAST of CsGy4G024670 vs.
Match NameE-valueIdentityDescription
BLAST of CsGy4G024670 vs. NCBI nr
Match NameE-valueIdentityDescription
KAE8649942.12.51e-78100.00hypothetical protein Csa_011932 [Cucumis sativus][more]
BLAST of CsGy4G024670 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of CsGy4G024670 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsGy4G024670.2CsGy4G024670.2mRNA