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Sequences
The following sequences are available for this feature:
Gene sequence (with intron) Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below. ATGGGAAAATTTTTAGGAGTAGTCATTCTTCCACCTGCAATTCCATTGGGGTTGGCAAAGTATGATTTTGCCACGTACCCAAGTAAAGGAAAACCAAAAAGGATGGAACTTTAAAATCCTAATCTGGGATTTATTTATTTTTTATTTTTTAGAAAAGAAAAGAAAAAAAGATACGACTTTTGTGTGGACTCTTTCCGCAAGTAAGGAACGATCTGGATTTGGTGCAAAGCAATTAGAGGCAAAGCCACCGCGTCCGGAATATTCTCAAAAGAGGAATAAACTTCCCATGAGTTGCGCCATAAAGCAAGAGGAAAAGGAGAACAGCAAGATCAATTGTGGTGTACGCGTAAAATTAAAAAGAAAAAAGGCAGGTAATGGAAAGGAAGCTACATCATAA mRNA sequence ATGGGAAAATTTTTAGGAGTAGTCATTCTTCCACCTGCAATTCCATTGGGGTTGGCAAAGTATGATTTTGCCACGTACCCAAAAAAGAAAAGAAAAAAAGATACGACTTTTGTGTGGACTCTTTCCGCAAGTAAGGAACGATCTGGATTTGGTGCAAAGCAATTAGAGGCAAAGCCACCGCGTCCGGAATATTCTCAAAAGAGGAATAAACTTCCCATGAGTTGCGCCATAAAGCAAGAGGAAAAGGAGAACAGCAAGATCAATTGTGGTGTACGCGTAAAATTAAAAAGAAAAAAGGCAGGTAATGGAAAGGAAGCTACATCATAA Coding sequence (CDS) ATGGGAAAATTTTTAGGAGTAGTCATTCTTCCACCTGCAATTCCATTGGGGTTGGCAAAGTATGATTTTGCCACGTACCCAAAAAAGAAAAGAAAAAAAGATACGACTTTTGTGTGGACTCTTTCCGCAAGTAAGGAACGATCTGGATTTGGTGCAAAGCAATTAGAGGCAAAGCCACCGCGTCCGGAATATTCTCAAAAGAGGAATAAACTTCCCATGAGTTGCGCCATAAAGCAAGAGGAAAAGGAGAACAGCAAGATCAATTGTGGTGTACGCGTAAAATTAAAAAGAAAAAAGGCAGGTAATGGAAAGGAAGCTACATCATAA Protein sequence MGKFLGVVILPPAIPLGLAKYDFATYPKKKRKKDTTFVWTLSASKERSGFGAKQLEAKPPRPEYSQKRNKLPMSCAIKQEEKENSKINCGVRVKLKRKKAGNGKEATS*
Homology
BLAST of CsGy4G022980 vs. NCBI nr
Match: KGN55264.1 (hypothetical protein Csa_012156 [Cucumis sativus]) HSP 1 Score: 216 bits (549), Expect = 1.50e-70 Identity = 108/108 (100.00%), Postives = 108/108 (100.00%), Query Frame = 0
Query: 1 MGKFLGVVILPPAIPLGLAKYDFATYPKKKRKKDTTFVWTLSASKERSGFGAKQLEAKPP 60
MGKFLGVVILPPAIPLGLAKYDFATYPKKKRKKDTTFVWTLSASKERSGFGAKQLEAKPP
Sbjct: 1 MGKFLGVVILPPAIPLGLAKYDFATYPKKKRKKDTTFVWTLSASKERSGFGAKQLEAKPP 60
Query: 61 RPEYSQKRNKLPMSCAIKQEEKENSKINCGVRVKLKRKKAGNGKEATS 108
RPEYSQKRNKLPMSCAIKQEEKENSKINCGVRVKLKRKKAGNGKEATS
Sbjct: 61 RPEYSQKRNKLPMSCAIKQEEKENSKINCGVRVKLKRKKAGNGKEATS 108
BLAST of CsGy4G022980 vs. ExPASy TrEMBL
Match: A0A0A0L2J9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G642450 PE=4 SV=1) HSP 1 Score: 216 bits (549), Expect = 7.24e-71 Identity = 108/108 (100.00%), Postives = 108/108 (100.00%), Query Frame = 0
Query: 1 MGKFLGVVILPPAIPLGLAKYDFATYPKKKRKKDTTFVWTLSASKERSGFGAKQLEAKPP 60
MGKFLGVVILPPAIPLGLAKYDFATYPKKKRKKDTTFVWTLSASKERSGFGAKQLEAKPP
Sbjct: 1 MGKFLGVVILPPAIPLGLAKYDFATYPKKKRKKDTTFVWTLSASKERSGFGAKQLEAKPP 60
Query: 61 RPEYSQKRNKLPMSCAIKQEEKENSKINCGVRVKLKRKKAGNGKEATS 108
RPEYSQKRNKLPMSCAIKQEEKENSKINCGVRVKLKRKKAGNGKEATS
Sbjct: 61 RPEYSQKRNKLPMSCAIKQEEKENSKINCGVRVKLKRKKAGNGKEATS 108
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
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| Match Name | E-value | Identity | Description | |
|---|
| KGN55264.1 | 1.50e-70 | 100.00 | hypothetical protein Csa_012156 [Cucumis sativus] | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| A0A0A0L2J9 | 7.24e-71 | 100.00 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G642450 PE=4 SV=1 | [more] |
| Match Name | E-value | Identity | Description | |
|---|
InterPro
Analysis Name: InterPro Annotations of Cucumber (Gy14) v2.1
Date Performed: 2021-10-25
| IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
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| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 44..71 |
Relationships
The following mRNA feature(s) are a part of this gene:
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