CsGy4G021810 (gene) Cucumber (Gy14) v2.1

Overview


Name	CsGy4G021810
Type	gene
Organism	Cucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
Description	proton pump-interactor 1-like
Location	Gy14Chr4: 28415059 .. 28415442 (-)
RNA-Seq Expression	CsGy4G021810
Synteny	CsGy4G021810

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAATGATAGTGACAAGTTTCTGTATTTACCACCTCAGGACCGTGAAAAGAAAGCAAAGAAGAAGGCAACAACATCTGGATCATTTGCCACACTTCCTGATGAAGAACCTACTGATGCTGATGCAGTTGAAGAGGAATCCACAGAGGTTGAAAAGGTTAATGAAACTGCTGAAGCTCCAGTTCCAGTGAAGACCAAAATCCCAAAGGAGACCGTTGTTAGGAGGCCTGGCAGGCAAAGAGGGCTGGATTCTGTTCCGAAAGTGATTCGGAAGCGCAAGAAGTCGATCAATTACTTGGAATGGGCTGGTCCTGCTGCTGCTGGTGCTGCGGTGTTACTTGTGATCCTTCTGGTTCTTGGATATTACTATTACTACCTTCTCTAA

mRNA sequence

ATGAATGATAGTGACAAGTTTCTGTATTTACCACCTCAGGACCGTGAAAAGAAAGCAAAGAAGAAGGCAACAACATCTGGATCATTTGCCACACTTCCTGATGAAGAACCTACTGATGCTGATGCAGTTGAAGAGGAATCCACAGAGGTTGAAAAGGTTAATGAAACTGCTGAAGCTCCAGTTCCAGTGAAGACCAAAATCCCAAAGGAGACCGTTGTTAGGAGGCCTGGCAGGCAAAGAGGGCTGGATTCTGTTCCGAAAGTGATTCGGAAGCGCAAGAAGTCGATCAATTACTTGGAATGGGCTGGTCCTGCTGCTGCTGGTGCTGCGGTGTTACTTGTGATCCTTCTGGTTCTTGGATATTACTATTACTACCTTCTCTAA

Coding sequence (CDS)

ATGAATGATAGTGACAAGTTTCTGTATTTACCACCTCAGGACCGTGAAAAGAAAGCAAAGAAGAAGGCAACAACATCTGGATCATTTGCCACACTTCCTGATGAAGAACCTACTGATGCTGATGCAGTTGAAGAGGAATCCACAGAGGTTGAAAAGGTTAATGAAACTGCTGAAGCTCCAGTTCCAGTGAAGACCAAAATCCCAAAGGAGACCGTTGTTAGGAGGCCTGGCAGGCAAAGAGGGCTGGATTCTGTTCCGAAAGTGATTCGGAAGCGCAAGAAGTCGATCAATTACTTGGAATGGGCTGGTCCTGCTGCTGCTGGTGCTGCGGTGTTACTTGTGATCCTTCTGGTTCTTGGATATTACTATTACTACCTTCTCTAA

Protein sequence

MNDSDKFLYLPPQDREKKAKKKATTSGSFATLPDEEPTDADAVEEESTEVEKVNETAEAPVPVKTKIPKETVVRRPGRQRGLDSVPKVIRKRKKSINYLEWAGPAAAGAAVLLVILLVLGYYYYYLL*

Homology

[Close]

BLAST of CsGy4G021810 vs. ExPASy Swiss-Prot
Match: O23144 (Proton pump-interactor 1 OS=Arabidopsis thaliana OX=3702 GN=PPI1 PE=1 SV=2)

HSP 1 Score: 61.6 bits (148), Expect = 7.4e-09
Identity = 50/115 (43.48%), Postives = 68/115 (59.13%), Query Frame = 0


Query: 13  QDREKKAKKKATTSGSFATLPDEEPTDADAVEEESTEVEKVNETAEAPV----PVKTKIP 72
           +++EKKAKKK  T G+  T  +E P   +A EEE           EAPV    P K K+ 
Sbjct: 515 KEQEKKAKKK--TGGNTETETEEVP---EASEEE----------IEAPVQEEKPQKEKVF 574

Query: 73  KETVVRRPGRQRGLDSVPKVIRKRKKSINYLEWAGPAAAGAAVLLVILLVLGYYY 124
           KE  +R   R RG +++P+ I KRKKS NY  +A P    AA+++++LLVLGYYY
Sbjct: 575 KEKPIRNRTRGRGPETIPRAILKRKKSTNYWVYAAP----AALVVLLLLVLGYYY 610

[Close]

BLAST of CsGy4G021810 vs. ExPASy Swiss-Prot
Match: Q762B4 (Proton pump-interactor BIP103 OS=Oryza sativa subsp. japonica OX=39947 GN=BIP103 PE=1 SV=1)

HSP 1 Score: 54.7 bits (130), Expect = 9.0e-07
Identity = 41/115 (35.65%), Postives = 63/115 (54.78%), Query Frame = 0


Query: 13  QDREKKAKKKATTSGSFATLPD-EEPTDADAVEEESTEVEKVNETAEAPVPVKTKIPKET 72
           ++ EKK K++   +   A   D E  T++D   + + E +  +++A A  PV  +  +  
Sbjct: 507 KEAEKKLKREEMRARRRAGAADTEASTESDNRSDGAAEAQAEDDSAPASAPVMREQRESV 566

Query: 73  VVRRPGRQRGLDSVPKVIRKRKKSINYLEWAGPAAAGAAVLLVILLVLGYYYYYL 127
              R    +    +PK I +RKK+ +Y  WAGPAAA AA L+ +L VLGYY YYL
Sbjct: 567 RYSRNVVTKSKAPLPKAILRRKKAQSYWSWAGPAAAVAAALVALLAVLGYYQYYL 621

[Close]

BLAST of CsGy4G021810 vs. ExPASy Swiss-Prot
Match: Q6ZBF6 (Proton pump-interactor BIP131 OS=Oryza sativa subsp. japonica OX=39947 GN=BIP131 PE=1 SV=1)

HSP 1 Score: 50.1 bits (118), Expect = 2.2e-05
Identity = 41/115 (35.65%), Postives = 59/115 (51.30%), Query Frame = 0


Query: 13  QDREKKAKKKATTSGSFATLPDEEPTDADAVEEESTEVEKVNETAEAPVPVKTKIPKETV 72
           +++EKKA+K++ T+G       EE  ++DA   +S E E   E   APV +K      + 
Sbjct: 512 KEKEKKARKRSATAGG---AESEEAAESDA---KSDEAEAQEEEPAAPVTIKKNARHRST 571

Query: 73  VRRPGRQRGLDSVPKVIRKRKKSINYLEWAGPAAAGAAVLLVILLVLGYYYYYLL 128
           V +         +PK + KRKKS  +  W  P AA AA L+ +L  L YY YY L
Sbjct: 572 VTKT-----KTPLPKAVLKRKKSQAFWSWGAPMAALAAALVALLGALVYYQYYYL 615

[Close]

BLAST of CsGy4G021810 vs. NCBI nr
Match: KAA0064326.1 (proton pump-interactor 1 isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 209 bits (531), Expect = 1.81e-62
Identity = 113/114 (99.12%), Postives = 114/114 (100.00%), Query Frame = 0


Query: 14  DREKKAKKKATTSGSFATLPDEEPTDADAVEEESTEVEKVNETAEAPVPVKTKIPKETVV 73
           DREKKAKKKATTSGSFATLPDEEPTDADAVEEESTEVEKVNETAEAPVPVKTKIPKET+V
Sbjct: 398 DREKKAKKKATTSGSFATLPDEEPTDADAVEEESTEVEKVNETAEAPVPVKTKIPKETIV 457

Query: 74  RRPGRQRGLDSVPKVIRKRKKSINYLEWAGPAAAGAAVLLVILLVLGYYYYYLL 127
           RRPGRQRGLDSVPKVIRKRKKSINYLEWAGPAAAGAAVLLVILLVLGYYYYYLL
Sbjct: 458 RRPGRQRGLDSVPKVIRKRKKSINYLEWAGPAAAGAAVLLVILLVLGYYYYYLL 511

[Close]

BLAST of CsGy4G021810 vs. NCBI nr
Match: XP_011654071.2 (proton pump-interactor 1 [Cucumis sativus])

HSP 1 Score: 209 bits (533), Expect = 9.18e-62
Identity = 114/115 (99.13%), Postives = 115/115 (100.00%), Query Frame = 0


Query: 13  QDREKKAKKKATTSGSFATLPDEEPTDADAVEEESTEVEKVNETAEAPVPVKTKIPKETV 72
           +DREKKAKKKATTSGSFATLPDEEPTDADAVEEESTEVEKVNETAEAPVPVKTKIPKETV
Sbjct: 516 KDREKKAKKKATTSGSFATLPDEEPTDADAVEEESTEVEKVNETAEAPVPVKTKIPKETV 575

Query: 73  VRRPGRQRGLDSVPKVIRKRKKSINYLEWAGPAAAGAAVLLVILLVLGYYYYYLL 127
           VRRPGRQRGLDSVPKVIRKRKKSINYLEWAGPAAAGAAVLLVILLVLGYYYYYLL
Sbjct: 576 VRRPGRQRGLDSVPKVIRKRKKSINYLEWAGPAAAGAAVLLVILLVLGYYYYYLL 630

[Close]

BLAST of CsGy4G021810 vs. NCBI nr
Match: XP_008452453.1 (PREDICTED: proton pump-interactor 1 isoform X1 [Cucumis melo] >XP_008452454.1 PREDICTED: proton pump-interactor 1 isoform X2 [Cucumis melo])

HSP 1 Score: 209 bits (532), Expect = 1.29e-61
Identity = 113/115 (98.26%), Postives = 115/115 (100.00%), Query Frame = 0


Query: 13  QDREKKAKKKATTSGSFATLPDEEPTDADAVEEESTEVEKVNETAEAPVPVKTKIPKETV 72
           +DREKKAKKKATTSGSFATLPDEEPTDADAVEEESTEVEKVNETAEAPVPVKTKIPKET+
Sbjct: 516 KDREKKAKKKATTSGSFATLPDEEPTDADAVEEESTEVEKVNETAEAPVPVKTKIPKETI 575

Query: 73  VRRPGRQRGLDSVPKVIRKRKKSINYLEWAGPAAAGAAVLLVILLVLGYYYYYLL 127
           VRRPGRQRGLDSVPKVIRKRKKSINYLEWAGPAAAGAAVLLVILLVLGYYYYYLL
Sbjct: 576 VRRPGRQRGLDSVPKVIRKRKKSINYLEWAGPAAAGAAVLLVILLVLGYYYYYLL 630

[Close]

BLAST of CsGy4G021810 vs. NCBI nr
Match: KAE8649841.1 (hypothetical protein Csa_012471 [Cucumis sativus])

HSP 1 Score: 209 bits (532), Expect = 1.50e-61
Identity = 114/114 (100.00%), Postives = 114/114 (100.00%), Query Frame = 0


Query: 14  DREKKAKKKATTSGSFATLPDEEPTDADAVEEESTEVEKVNETAEAPVPVKTKIPKETVV 73
           DREKKAKKKATTSGSFATLPDEEPTDADAVEEESTEVEKVNETAEAPVPVKTKIPKETVV
Sbjct: 526 DREKKAKKKATTSGSFATLPDEEPTDADAVEEESTEVEKVNETAEAPVPVKTKIPKETVV 585

Query: 74  RRPGRQRGLDSVPKVIRKRKKSINYLEWAGPAAAGAAVLLVILLVLGYYYYYLL 127
           RRPGRQRGLDSVPKVIRKRKKSINYLEWAGPAAAGAAVLLVILLVLGYYYYYLL
Sbjct: 586 RRPGRQRGLDSVPKVIRKRKKSINYLEWAGPAAAGAAVLLVILLVLGYYYYYLL 639

[Close]

BLAST of CsGy4G021810 vs. NCBI nr
Match: TYK20260.1 (proton pump-interactor 1 isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 209 bits (531), Expect = 2.20e-61
Identity = 113/114 (99.12%), Postives = 114/114 (100.00%), Query Frame = 0


Query: 14  DREKKAKKKATTSGSFATLPDEEPTDADAVEEESTEVEKVNETAEAPVPVKTKIPKETVV 73
           DREKKAKKKATTSGSFATLPDEEPTDADAVEEESTEVEKVNETAEAPVPVKTKIPKET+V
Sbjct: 529 DREKKAKKKATTSGSFATLPDEEPTDADAVEEESTEVEKVNETAEAPVPVKTKIPKETIV 588

Query: 74  RRPGRQRGLDSVPKVIRKRKKSINYLEWAGPAAAGAAVLLVILLVLGYYYYYLL 127
           RRPGRQRGLDSVPKVIRKRKKSINYLEWAGPAAAGAAVLLVILLVLGYYYYYLL
Sbjct: 589 RRPGRQRGLDSVPKVIRKRKKSINYLEWAGPAAAGAAVLLVILLVLGYYYYYLL 642

[Close]

BLAST of CsGy4G021810 vs. ExPASy TrEMBL
Match: A0A5A7VD69 (Proton pump-interactor 1 isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold255G00250 PE=4 SV=1)

HSP 1 Score: 209 bits (531), Expect = 8.76e-63
Identity = 113/114 (99.12%), Postives = 114/114 (100.00%), Query Frame = 0


Query: 14  DREKKAKKKATTSGSFATLPDEEPTDADAVEEESTEVEKVNETAEAPVPVKTKIPKETVV 73
           DREKKAKKKATTSGSFATLPDEEPTDADAVEEESTEVEKVNETAEAPVPVKTKIPKET+V
Sbjct: 398 DREKKAKKKATTSGSFATLPDEEPTDADAVEEESTEVEKVNETAEAPVPVKTKIPKETIV 457

Query: 74  RRPGRQRGLDSVPKVIRKRKKSINYLEWAGPAAAGAAVLLVILLVLGYYYYYLL 127
           RRPGRQRGLDSVPKVIRKRKKSINYLEWAGPAAAGAAVLLVILLVLGYYYYYLL
Sbjct: 458 RRPGRQRGLDSVPKVIRKRKKSINYLEWAGPAAAGAAVLLVILLVLGYYYYYLL 511

[Close]

BLAST of CsGy4G021810 vs. ExPASy TrEMBL
Match: A0A1S3BUN5 (proton pump-interactor 1 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103493484 PE=4 SV=1)

HSP 1 Score: 209 bits (532), Expect = 6.22e-62
Identity = 113/115 (98.26%), Postives = 115/115 (100.00%), Query Frame = 0


Query: 13  QDREKKAKKKATTSGSFATLPDEEPTDADAVEEESTEVEKVNETAEAPVPVKTKIPKETV 72
           +DREKKAKKKATTSGSFATLPDEEPTDADAVEEESTEVEKVNETAEAPVPVKTKIPKET+
Sbjct: 516 KDREKKAKKKATTSGSFATLPDEEPTDADAVEEESTEVEKVNETAEAPVPVKTKIPKETI 575

Query: 73  VRRPGRQRGLDSVPKVIRKRKKSINYLEWAGPAAAGAAVLLVILLVLGYYYYYLL 127
           VRRPGRQRGLDSVPKVIRKRKKSINYLEWAGPAAAGAAVLLVILLVLGYYYYYLL
Sbjct: 576 VRRPGRQRGLDSVPKVIRKRKKSINYLEWAGPAAAGAAVLLVILLVLGYYYYYLL 630

[Close]

BLAST of CsGy4G021810 vs. ExPASy TrEMBL
Match: A0A0A0L261 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G637150 PE=4 SV=1)

HSP 1 Score: 209 bits (532), Expect = 7.24e-62
Identity = 114/114 (100.00%), Postives = 114/114 (100.00%), Query Frame = 0


Query: 14  DREKKAKKKATTSGSFATLPDEEPTDADAVEEESTEVEKVNETAEAPVPVKTKIPKETVV 73
           DREKKAKKKATTSGSFATLPDEEPTDADAVEEESTEVEKVNETAEAPVPVKTKIPKETVV
Sbjct: 526 DREKKAKKKATTSGSFATLPDEEPTDADAVEEESTEVEKVNETAEAPVPVKTKIPKETVV 585

Query: 74  RRPGRQRGLDSVPKVIRKRKKSINYLEWAGPAAAGAAVLLVILLVLGYYYYYLL 127
           RRPGRQRGLDSVPKVIRKRKKSINYLEWAGPAAAGAAVLLVILLVLGYYYYYLL
Sbjct: 586 RRPGRQRGLDSVPKVIRKRKKSINYLEWAGPAAAGAAVLLVILLVLGYYYYYLL 639

[Close]

BLAST of CsGy4G021810 vs. ExPASy TrEMBL
Match: A0A5D3D9V7 (Proton pump-interactor 1 isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold134G004000 PE=4 SV=1)

HSP 1 Score: 209 bits (531), Expect = 1.07e-61
Identity = 113/114 (99.12%), Postives = 114/114 (100.00%), Query Frame = 0


Query: 14  DREKKAKKKATTSGSFATLPDEEPTDADAVEEESTEVEKVNETAEAPVPVKTKIPKETVV 73
           DREKKAKKKATTSGSFATLPDEEPTDADAVEEESTEVEKVNETAEAPVPVKTKIPKET+V
Sbjct: 529 DREKKAKKKATTSGSFATLPDEEPTDADAVEEESTEVEKVNETAEAPVPVKTKIPKETIV 588

Query: 74  RRPGRQRGLDSVPKVIRKRKKSINYLEWAGPAAAGAAVLLVILLVLGYYYYYLL 127
           RRPGRQRGLDSVPKVIRKRKKSINYLEWAGPAAAGAAVLLVILLVLGYYYYYLL
Sbjct: 589 RRPGRQRGLDSVPKVIRKRKKSINYLEWAGPAAAGAAVLLVILLVLGYYYYYLL 642

[Close]

BLAST of CsGy4G021810 vs. ExPASy TrEMBL
Match: A0A6J1F7E9 (proton pump-interactor 1-like OS=Cucurbita moschata OX=3662 GN=LOC111442817 PE=4 SV=1)

HSP 1 Score: 157 bits (397), Expect = 1.96e-42
Identity = 93/116 (80.17%), Postives = 102/116 (87.93%), Query Frame = 0


Query: 13  QDREKKAKKKATTSGSFATLPDEEPTDADAVEEESTEVEKVNETAEA-PVPVKTKIPKET 72
           +DREKKAKKK T SGS AT+PDEEP +ADAVEEESTE+E VNE+AEA PVPVK+KIPKET
Sbjct: 520 KDREKKAKKKVTASGS-ATVPDEEPVEADAVEEESTELENVNESAEAAPVPVKSKIPKET 579

Query: 73  VVRRPGRQRGLDSVPKVIRKRKKSINYLEWAGPAAAGAAVLLVILLVLGYYYYYLL 127
            +R  GRQRGLDSVPK+IRKRKKSINY +WA PAAA   VLLVILLVLGYYYYYLL
Sbjct: 580 GIRSRGRQRGLDSVPKIIRKRKKSINYWDWAAPAAA---VLLVILLVLGYYYYYLL 631

[Close]

BLAST of CsGy4G021810 vs. TAIR 10
Match: AT4G27500.1 (proton pump interactor 1 )

HSP 1 Score: 61.6 bits (148), Expect = 5.2e-10
Identity = 50/115 (43.48%), Postives = 68/115 (59.13%), Query Frame = 0


Query: 13  QDREKKAKKKATTSGSFATLPDEEPTDADAVEEESTEVEKVNETAEAPV----PVKTKIP 72
           +++EKKAKKK  T G+  T  +E P   +A EEE           EAPV    P K K+ 
Sbjct: 515 KEQEKKAKKK--TGGNTETETEEVP---EASEEE----------IEAPVQEEKPQKEKVF 574

Query: 73  KETVVRRPGRQRGLDSVPKVIRKRKKSINYLEWAGPAAAGAAVLLVILLVLGYYY 124
           KE  +R   R RG +++P+ I KRKKS NY  +A P    AA+++++LLVLGYYY
Sbjct: 575 KEKPIRNRTRGRGPETIPRAILKRKKSTNYWVYAAP----AALVVLLLLVLGYYY 610

The following BLAST results are available for this feature:

BLAST of CsGy4G021810 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O23144	7.4e-09	43.48	Proton pump-interactor 1 OS=Arabidopsis thaliana OX=3702 GN=PPI1 PE=1 SV=2	[more]
Q762B4	9.0e-07	35.65	Proton pump-interactor BIP103 OS=Oryza sativa subsp. japonica OX=39947 GN=BIP103...	[more]
Q6ZBF6	2.2e-05	35.65	Proton pump-interactor BIP131 OS=Oryza sativa subsp. japonica OX=39947 GN=BIP131...	[more]

BLAST of CsGy4G021810 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0064326.1	1.81e-62	99.12	proton pump-interactor 1 isoform X1 [Cucumis melo var. makuwa]	[more]
XP_011654071.2	9.18e-62	99.13	proton pump-interactor 1 [Cucumis sativus]	[more]
XP_008452453.1	1.29e-61	98.26	PREDICTED: proton pump-interactor 1 isoform X1 [Cucumis melo] >XP_008452454.1 PR...	[more]
KAE8649841.1	1.50e-61	100.00	hypothetical protein Csa_012471 [Cucumis sativus]	[more]
TYK20260.1	2.20e-61	99.12	proton pump-interactor 1 isoform X1 [Cucumis melo var. makuwa]	[more]

BLAST of CsGy4G021810 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7VD69	8.76e-63	99.12	Proton pump-interactor 1 isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6...	[more]
A0A1S3BUN5	6.22e-62	98.26	proton pump-interactor 1 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103493484 PE=4...	[more]
A0A0A0L261	7.24e-62	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G637150 PE=4 SV=1	[more]
A0A5D3D9V7	1.07e-61	99.12	Proton pump-interactor 1 isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5...	[more]
A0A6J1F7E9	1.96e-42	80.17	proton pump-interactor 1-like OS=Cucurbita moschata OX=3662 GN=LOC111442817 PE=4...	[more]

BLAST of CsGy4G021810 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G27500.1	5.2e-10	43.48	proton pump interactor 1	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (Gy14) v2.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..64
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..23
None	No IPR available	PANTHER	PTHR32219	RNA-BINDING PROTEIN YLMH-RELATED	coord: 13..124
None	No IPR available	PANTHER	PTHR32219:SF10	PROTON PUMP-INTERACTOR 1-LIKE	coord: 13..124

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsGy4G021810.2	CsGy4G021810.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane