CsGy4G016120 (gene) Cucumber (Gy14) v2.1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCAGGATGGAGATGGCTGGAAGCGGCACTTCCTCTCGGAATTATCGCCGGAATGCTTTGTGTAATGGGTAATGCTCAATATTACATTCACAAAGCCGCCCATGGCCGGGTAATTTCCTTTCTATTGCTTTCGATTTCAGCGTTTTCCCCTCTTCTTTGCTCAGTGGATCTTCTTTCTCAAAGTTCCGATCAACGATCTCTGTAATTAGTTTCTGGATTTTATTTATGTGGTTTTTGTTTTTGTAGCCTAAGCACATCGGTAATGATATGTGGGATGTTGCCATGGAACGCCGGGACAAGAAACTTGTTGAGAATTTATCCGCCGCTTCTCATAGTTGA ATGGCAGGATGGAGATGGCTGGAAGCGGCACTTCCTCTCGGAATTATCGCCGGAATGCTTTGTGTAATGGGTAATGCTCAATATTACATTCACAAAGCCGCCCATGGCCGGCCTAAGCACATCGGTAATGATATGTGGGATGTTGCCATGGAACGCCGGGACAAGAAACTTGTTGAGAATTTATCCGCCGCTTCTCATAGTTGA ATGGCAGGATGGAGATGGCTGGAAGCGGCACTTCCTCTCGGAATTATCGCCGGAATGCTTTGTGTAATGGGTAATGCTCAATATTACATTCACAAAGCCGCCCATGGCCGGCCTAAGCACATCGGTAATGATATGTGGGATGTTGCCATGGAACGCCGGGACAAGAAACTTGTTGAGAATTTATCCGCCGCTTCTCATAGTTGA MAGWRWLEAALPLGIIAGMLCVMGNAQYYIHKAAHGRPKHIGNDMWDVAMERRDKKLVENLSAASHS* Homology
BLAST of CsGy4G016120 vs. ExPASy Swiss-Prot
Match: Q9C9Z5 (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 1 OS=Arabidopsis thaliana OX=3702 GN=At3g08610 PE=1 SV=1) HSP 1 Score: 108.2 bits (269), Expect = 3.6e-23 Identity = 48/60 (80.00%), Postives = 53/60 (88.33%), Query Frame = 0
BLAST of CsGy4G016120 vs. NCBI nr
Match: XP_004142669.1 (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 1 [Cucumis sativus] >XP_031740619.1 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 1 [Cucumis sativus] >KGN54471.1 hypothetical protein Csa_012404 [Cucumis sativus]) HSP 1 Score: 146 bits (368), Expect = 3.26e-44 Identity = 67/67 (100.00%), Postives = 67/67 (100.00%), Query Frame = 0
BLAST of CsGy4G016120 vs. NCBI nr
Match: XP_008463294.1 (PREDICTED: NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 1 [Cucumis melo] >XP_008463295.1 PREDICTED: NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 1 [Cucumis melo] >XP_008463296.1 PREDICTED: NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 1 [Cucumis melo] >TYK06216.1 NADH dehydrogenase (ubiquinone) 1 alpha subcomplex subunit 1 [Cucumis melo var. makuwa]) HSP 1 Score: 144 bits (364), Expect = 1.33e-43 Identity = 66/67 (98.51%), Postives = 66/67 (98.51%), Query Frame = 0
BLAST of CsGy4G016120 vs. NCBI nr
Match: XP_038881013.1 (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 1 [Benincasa hispida]) HSP 1 Score: 143 bits (360), Expect = 5.43e-43 Identity = 64/67 (95.52%), Postives = 67/67 (100.00%), Query Frame = 0
BLAST of CsGy4G016120 vs. NCBI nr
Match: XP_022950918.1 (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 1 [Cucurbita moschata] >XP_022950920.1 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 1 [Cucurbita moschata] >XP_023543068.1 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 1 [Cucurbita pepo subsp. pepo] >XP_023543069.1 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 1 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 137 bits (346), Expect = 7.25e-41 Identity = 61/65 (93.85%), Postives = 64/65 (98.46%), Query Frame = 0
BLAST of CsGy4G016120 vs. NCBI nr
Match: KAG7033699.1 (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 1, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 137 bits (346), Expect = 2.01e-40 Identity = 61/65 (93.85%), Postives = 64/65 (98.46%), Query Frame = 0
BLAST of CsGy4G016120 vs. ExPASy TrEMBL
Match: A0A0A0L2Y7 (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 1 OS=Cucumis sativus OX=3659 GN=Csa_4G337280 PE=3 SV=1) HSP 1 Score: 146 bits (368), Expect = 1.58e-44 Identity = 67/67 (100.00%), Postives = 67/67 (100.00%), Query Frame = 0
BLAST of CsGy4G016120 vs. ExPASy TrEMBL
Match: A0A1S3CIY2 (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 1 OS=Cucumis melo OX=3656 GN=LOC103501486 PE=3 SV=1) HSP 1 Score: 144 bits (364), Expect = 6.45e-44 Identity = 66/67 (98.51%), Postives = 66/67 (98.51%), Query Frame = 0
BLAST of CsGy4G016120 vs. ExPASy TrEMBL
Match: A0A5D3C7B6 (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold287G00800 PE=3 SV=1) HSP 1 Score: 144 bits (364), Expect = 6.45e-44 Identity = 66/67 (98.51%), Postives = 66/67 (98.51%), Query Frame = 0
BLAST of CsGy4G016120 vs. ExPASy TrEMBL
Match: A0A6J1GH44 (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 1 OS=Cucurbita moschata OX=3662 GN=LOC111453870 PE=3 SV=1) HSP 1 Score: 137 bits (346), Expect = 3.51e-41 Identity = 61/65 (93.85%), Postives = 64/65 (98.46%), Query Frame = 0
BLAST of CsGy4G016120 vs. ExPASy TrEMBL
Match: A0A6J1HU02 (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 1 OS=Cucurbita maxima OX=3661 GN=LOC111466140 PE=3 SV=1) HSP 1 Score: 134 bits (337), Expect = 8.08e-40 Identity = 59/63 (93.65%), Postives = 62/63 (98.41%), Query Frame = 0
BLAST of CsGy4G016120 vs. TAIR 10
Match: AT3G08610.1 (unknown protein; Has 40 Blast hits to 40 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 40; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 108.2 bits (269), Expect = 2.6e-24 Identity = 48/60 (80.00%), Postives = 53/60 (88.33%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (Gy14) v2.1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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