CsGy4G015600 (gene) Cucumber (Gy14) v2.1

Overview


Name	CsGy4G015600
Type	gene
Organism	Cucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
Description	Seed maturation protein PM41
Location	Gy14Chr4: 20265514 .. 20265934 (-)
RNA-Seq Expression	CsGy4G015600
Synteny	CsGy4G015600

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCCGCCACGCTACAAACTTGGCTCTCTCCTTTGGCATGTCCGCCACGAAATTACTCACTCATATCTTAATCCCAATCCCATTATTATTATATATATTATAATACCCAATTTCGTTTTCCTACAGCTTAATTCTCTCTGAATATTAGAAAATCAAATTCCCTAAATAATAACAACAATAATAATGTCAGGAGCTCAGGGCGCCCAGCCGAAGGAATCGTTCACGGCAACCACTTACGAGTCGGTCTCCGGTGGAGAGAACCGCACGAGAACCGATATCCGTTCCCGGGAGGACGCCGGGATGATTCAGATCGATAAAATTCAGGATAAAGTGGAAGACGCCGCGGGGAAAGGCGGTCCGGTGTTCGGTGCTGGGAAAGATGACAAAAAGCAAGACCTTGGAGTTACGGGCACTGGATAA

mRNA sequence

ATGGCCGCCACGCTACAAACTTGGCTCTCTCCTTTGGGCGCCCAGCCGAAGGAATCGTTCACGGCAACCACTTACGAGTCGGTCTCCGGTGGAGAGAACCGCACGAGAACCGATATCCGTTCCCGGGAGGACGCCGGGATGATTCAGATCGATAAAATTCAGGATAAAGTGGAAGACGCCGCGGGGAAAGGCGGTCCGGTGTTCGGTGCTGGGAAAGATGACAAAAAGCAAGACCTTGGAGTTACGGGCACTGGATAA

Coding sequence (CDS)

ATGGCCGCCACGCTACAAACTTGGCTCTCTCCTTTGGGCGCCCAGCCGAAGGAATCGTTCACGGCAACCACTTACGAGTCGGTCTCCGGTGGAGAGAACCGCACGAGAACCGATATCCGTTCCCGGGAGGACGCCGGGATGATTCAGATCGATAAAATTCAGGATAAAGTGGAAGACGCCGCGGGGAAAGGCGGTCCGGTGTTCGGTGCTGGGAAAGATGACAAAAAGCAAGACCTTGGAGTTACGGGCACTGGATAA

Protein sequence

MAATLQTWLSPLGAQPKESFTATTYESVSGGENRTRTDIRSREDAGMIQIDKIQDKVEDAAGKGGPVFGAGKDDKKQDLGVTGTG*

Homology

[Close]

BLAST of CsGy4G015600 vs. NCBI nr
Match: KAE8649573.1 (hypothetical protein Csa_021550 [Cucumis sativus])

HSP 1 Score: 166 bits (421), Expect = 9.53e-52
Identity = 85/85 (100.00%), Postives = 85/85 (100.00%), Query Frame = 0


Query: 1  MAATLQTWLSPLGAQPKESFTATTYESVSGGENRTRTDIRSREDAGMIQIDKIQDKVEDA 60
          MAATLQTWLSPLGAQPKESFTATTYESVSGGENRTRTDIRSREDAGMIQIDKIQDKVEDA
Sbjct: 1  MAATLQTWLSPLGAQPKESFTATTYESVSGGENRTRTDIRSREDAGMIQIDKIQDKVEDA 60

Query: 61 AGKGGPVFGAGKDDKKQDLGVTGTG 85
          AGKGGPVFGAGKDDKKQDLGVTGTG
Sbjct: 61 AGKGGPVFGAGKDDKKQDLGVTGTG 85

[Close]

BLAST of CsGy4G015600 vs. NCBI nr
Match: XP_011653711.1 (uncharacterized protein LOC101209719 [Cucumis sativus])

HSP 1 Score: 143 bits (361), Expect = 1.11e-42
Identity = 73/73 (100.00%), Postives = 73/73 (100.00%), Query Frame = 0


Query: 13 GAQPKESFTATTYESVSGGENRTRTDIRSREDAGMIQIDKIQDKVEDAAGKGGPVFGAGK 72
          GAQPKESFTATTYESVSGGENRTRTDIRSREDAGMIQIDKIQDKVEDAAGKGGPVFGAGK
Sbjct: 6  GAQPKESFTATTYESVSGGENRTRTDIRSREDAGMIQIDKIQDKVEDAAGKGGPVFGAGK 65

Query: 73 DDKKQDLGVTGTG 85
          DDKKQDLGVTGTG
Sbjct: 66 DDKKQDLGVTGTG 78

[Close]

BLAST of CsGy4G015600 vs. NCBI nr
Match: XP_008464243.1 (PREDICTED: uncharacterized protein LOC103502173 [Cucumis melo] >KAA0063729.1 uncharacterized protein E6C27_scaffold1290G00100 [Cucumis melo var. makuwa] >TYJ97777.1 uncharacterized protein E5676_scaffold67599G00010 [Cucumis melo var. makuwa])

HSP 1 Score: 141 bits (355), Expect = 9.13e-42
Identity = 71/73 (97.26%), Postives = 73/73 (100.00%), Query Frame = 0


Query: 13 GAQPKESFTATTYESVSGGENRTRTDIRSREDAGMIQIDKIQDKVEDAAGKGGPVFGAGK 72
          GAQPKESFTATTYESVSGGENRTRTDIRSREDAGMIQIDK+QDKVEDAAGKGGPVFGAGK
Sbjct: 6  GAQPKESFTATTYESVSGGENRTRTDIRSREDAGMIQIDKLQDKVEDAAGKGGPVFGAGK 65

Query: 73 DDKKQDLGVTGTG 85
          +DKKQDLGVTGTG
Sbjct: 66 EDKKQDLGVTGTG 78

[Close]

BLAST of CsGy4G015600 vs. NCBI nr
Match: XP_038883613.1 (uncharacterized protein LOC120074530 [Benincasa hispida])

HSP 1 Score: 137 bits (346), Expect = 2.16e-40
Identity = 68/73 (93.15%), Postives = 72/73 (98.63%), Query Frame = 0


Query: 13 GAQPKESFTATTYESVSGGENRTRTDIRSREDAGMIQIDKIQDKVEDAAGKGGPVFGAGK 72
          GAQPKESFTATTYESV GGENRT+TD+RSREDAGMIQIDK+QDKV+DAAGKGGPVFGAGK
Sbjct: 6  GAQPKESFTATTYESVPGGENRTKTDLRSREDAGMIQIDKLQDKVQDAAGKGGPVFGAGK 65

Query: 73 DDKKQDLGVTGTG 85
          DDKKQDLGVTGTG
Sbjct: 66 DDKKQDLGVTGTG 78

[Close]

BLAST of CsGy4G015600 vs. NCBI nr
Match: XP_022949816.1 (uncharacterized protein LOC111453100 [Cucurbita moschata])

HSP 1 Score: 137 bits (345), Expect = 3.06e-40
Identity = 68/73 (93.15%), Postives = 72/73 (98.63%), Query Frame = 0


Query: 13 GAQPKESFTATTYESVSGGENRTRTDIRSREDAGMIQIDKIQDKVEDAAGKGGPVFGAGK 72
          GAQPK+SFTATTYESV GGENRTRTD+RSREDAGMIQIDK+QDKVEDAAGKGGPVFGAGK
Sbjct: 6  GAQPKDSFTATTYESVPGGENRTRTDLRSREDAGMIQIDKLQDKVEDAAGKGGPVFGAGK 65

Query: 73 DDKKQDLGVTGTG 85
          DDKKQDLGV+GTG
Sbjct: 66 DDKKQDLGVSGTG 78

[Close]

BLAST of CsGy4G015600 vs. ExPASy TrEMBL
Match: A0A0A0KY41 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G314500 PE=4 SV=1)

HSP 1 Score: 143 bits (361), Expect = 5.37e-43
Identity = 73/73 (100.00%), Postives = 73/73 (100.00%), Query Frame = 0


Query: 13 GAQPKESFTATTYESVSGGENRTRTDIRSREDAGMIQIDKIQDKVEDAAGKGGPVFGAGK 72
          GAQPKESFTATTYESVSGGENRTRTDIRSREDAGMIQIDKIQDKVEDAAGKGGPVFGAGK
Sbjct: 6  GAQPKESFTATTYESVSGGENRTRTDIRSREDAGMIQIDKIQDKVEDAAGKGGPVFGAGK 65

Query: 73 DDKKQDLGVTGTG 85
          DDKKQDLGVTGTG
Sbjct: 66 DDKKQDLGVTGTG 78

[Close]

BLAST of CsGy4G015600 vs. ExPASy TrEMBL
Match: A0A5D3BF74 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold67599G00010 PE=4 SV=1)

HSP 1 Score: 141 bits (355), Expect = 4.42e-42
Identity = 71/73 (97.26%), Postives = 73/73 (100.00%), Query Frame = 0


Query: 13 GAQPKESFTATTYESVSGGENRTRTDIRSREDAGMIQIDKIQDKVEDAAGKGGPVFGAGK 72
          GAQPKESFTATTYESVSGGENRTRTDIRSREDAGMIQIDK+QDKVEDAAGKGGPVFGAGK
Sbjct: 6  GAQPKESFTATTYESVSGGENRTRTDIRSREDAGMIQIDKLQDKVEDAAGKGGPVFGAGK 65

Query: 73 DDKKQDLGVTGTG 85
          +DKKQDLGVTGTG
Sbjct: 66 EDKKQDLGVTGTG 78

[Close]

BLAST of CsGy4G015600 vs. ExPASy TrEMBL
Match: A0A1S3CL14 (uncharacterized protein LOC103502173 OS=Cucumis melo OX=3656 GN=LOC103502173 PE=4 SV=1)

HSP 1 Score: 141 bits (355), Expect = 4.42e-42
Identity = 71/73 (97.26%), Postives = 73/73 (100.00%), Query Frame = 0


Query: 13 GAQPKESFTATTYESVSGGENRTRTDIRSREDAGMIQIDKIQDKVEDAAGKGGPVFGAGK 72
          GAQPKESFTATTYESVSGGENRTRTDIRSREDAGMIQIDK+QDKVEDAAGKGGPVFGAGK
Sbjct: 6  GAQPKESFTATTYESVSGGENRTRTDIRSREDAGMIQIDKLQDKVEDAAGKGGPVFGAGK 65

Query: 73 DDKKQDLGVTGTG 85
          +DKKQDLGVTGTG
Sbjct: 66 EDKKQDLGVTGTG 78

[Close]

BLAST of CsGy4G015600 vs. ExPASy TrEMBL
Match: A0A6J1GD40 (uncharacterized protein LOC111453100 OS=Cucurbita moschata OX=3662 GN=LOC111453100 PE=4 SV=1)

HSP 1 Score: 137 bits (345), Expect = 1.48e-40
Identity = 68/73 (93.15%), Postives = 72/73 (98.63%), Query Frame = 0


Query: 13 GAQPKESFTATTYESVSGGENRTRTDIRSREDAGMIQIDKIQDKVEDAAGKGGPVFGAGK 72
          GAQPK+SFTATTYESV GGENRTRTD+RSREDAGMIQIDK+QDKVEDAAGKGGPVFGAGK
Sbjct: 6  GAQPKDSFTATTYESVPGGENRTRTDLRSREDAGMIQIDKLQDKVEDAAGKGGPVFGAGK 65

Query: 73 DDKKQDLGVTGTG 85
          DDKKQDLGV+GTG
Sbjct: 66 DDKKQDLGVSGTG 78

[Close]

BLAST of CsGy4G015600 vs. ExPASy TrEMBL
Match: A0A6J1ITS5 (uncharacterized protein LOC111478345 OS=Cucurbita maxima OX=3661 GN=LOC111478345 PE=4 SV=1)

HSP 1 Score: 135 bits (341), Expect = 6.05e-40
Identity = 67/73 (91.78%), Postives = 72/73 (98.63%), Query Frame = 0


Query: 13 GAQPKESFTATTYESVSGGENRTRTDIRSREDAGMIQIDKIQDKVEDAAGKGGPVFGAGK 72
          GAQPK+SFTATTYESV GGENRTRTD+RSREDAGMIQIDK+QDKVEDAAGKGGPVFGAGK
Sbjct: 6  GAQPKDSFTATTYESVPGGENRTRTDLRSREDAGMIQIDKLQDKVEDAAGKGGPVFGAGK 65

Query: 73 DDKKQDLGVTGTG 85
          D+KKQDLGV+GTG
Sbjct: 66 DEKKQDLGVSGTG 78

[Close]

BLAST of CsGy4G015600 vs. TAIR 10
Match: AT2G21820.1 (unknown protein; Has 45 Blast hits to 45 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 45; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 116.7 bits (291), Expect = 9.2e-27
Identity = 57/73 (78.08%), Postives = 65/73 (89.04%), Query Frame = 0


Query: 13 GAQPKESFTATTYESVSGGENRTRTDIRSREDAGMIQIDKIQDKVEDAAGKGGPVFGAGK 72
          GA+P +S TATTYESV GG+N+T+ DIRS+ED G IQ+DK+QDKV DAAG GGPVFGAGK
Sbjct: 6  GAEPMDSRTATTYESVEGGQNKTKLDIRSKEDEGGIQVDKLQDKVSDAAGLGGPVFGAGK 65

Query: 73 DDKKQDLGVTGTG 86
          DDKKQDLGVTGTG
Sbjct: 66 DDKKQDLGVTGTG 78

The following BLAST results are available for this feature:

BLAST of CsGy4G015600 vs.


Match Name	E-value	Identity	Description

BLAST of CsGy4G015600 vs. NCBI nr


Match Name	E-value	Identity	Description
KAE8649573.1	9.53e-52	100.00	hypothetical protein Csa_021550 [Cucumis sativus]	[more]
XP_011653711.1	1.11e-42	100.00	uncharacterized protein LOC101209719 [Cucumis sativus]	[more]
XP_008464243.1	9.13e-42	97.26	PREDICTED: uncharacterized protein LOC103502173 [Cucumis melo] >KAA0063729.1 unc...	[more]
XP_038883613.1	2.16e-40	93.15	uncharacterized protein LOC120074530 [Benincasa hispida]	[more]
XP_022949816.1	3.06e-40	93.15	uncharacterized protein LOC111453100 [Cucurbita moschata]	[more]

BLAST of CsGy4G015600 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KY41	5.37e-43	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G314500 PE=4 SV=1	[more]
A0A5D3BF74	4.42e-42	97.26	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A1S3CL14	4.42e-42	97.26	uncharacterized protein LOC103502173 OS=Cucumis melo OX=3656 GN=LOC103502173 PE=...	[more]
A0A6J1GD40	1.48e-40	93.15	uncharacterized protein LOC111453100 OS=Cucurbita moschata OX=3662 GN=LOC1114531...	[more]
A0A6J1ITS5	6.05e-40	91.78	uncharacterized protein LOC111478345 OS=Cucurbita maxima OX=3661 GN=LOC111478345...	[more]

BLAST of CsGy4G015600 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G21820.1	9.2e-27	78.08	unknown protein; Has 45 Blast hits to 45 proteins in 13 species: Archae - 0; Bac...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (Gy14) v2.1
Date Performed: 2021-10-25

Position :

Zoom :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 60..85
None	No IPR available	PANTHER	PTHR36012	OS01G0654400 PROTEIN	coord: 13..85
None	No IPR available	PANTHER	PTHR36012:SF2	OS01G0654400 PROTEIN	coord: 13..85

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsGy4G015600.2	CsGy4G015600.2	mRNA