CsGy4G015240 (gene) Cucumber (Gy14) v2.1
Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TTCACACCCATTATTTGACGTTCAAATTCCTCCCTCCTCTCCTTTTCTTTCTCTCATAACCAAATATCCATTAATAATCGCCCCGATCTTTTTCGGAATTTTCCGCGCTATGGAAGATTTTTGCGATCTCCGCCGTGCTGTTTTTCATCGAATCGGCGTTAATGCGGAGGCGGCGGGGGATAGGTTTCCGCCGTGGAGTGTACTGGAGACGAAGGAATTGCTGGCGATTAGAGCGGCTTTGGATAAGAATTTCTCGGAGATGAAACAGAATAGAATGCTTTGGATTTCGGTGGCCGAAAAGATGAAGGCTAAAGGCTTTAATCGAAGCGACGAGCAGTGTAAATGTAAATGGAAAAATCTCGTCACTCGTTATAAGGTAATCAAATGAATACTCTTTTTTTTTTTAGGGTTTTTGATATGTAACCGCTACCTTTAATTTATTATATAACAAAATATTTTCTCCGTTATAATTTTATTTTTAAAAAGTCGAGTTTAGAATTTTAATCTACACAAAATTTAATTTAATTTAGTGAAAATTTTAGACATATTATTAATTACAAAGTTGAAGATATAGAGTTGTATCAAATACAAAACCAAAAGTTTATACATCTATTAAATATTTTTGAATCGTCATATTTTATATTCTCTAGTTCTCCCCTTTCACGTATTGTTCATATATATATATATAGAAATTTTATAACTAAATAAACACAAAGCCTAAAGAATTTGATACTAAACTTAATTAAACTCACAGTTTTTTCATCAAACTAATTAAACTCTTAAAAAAATAATATGAATAATTATGTGTCAAATCTGAGGGGTTAAGGCATCAAATCTAACAAATTTTCTTTACCATCTTAAATGGACCTATCGTCAAAAAAATTGAAAAAACATACAATGTTGGAATTCTTAATTAGCTTAGGGTTTAGAATTCTCACTATAGTCTTCATCAAATTTGGATTCTTAACTAAATTAAAAAAAAAAAACTTAAAATTATTTTTTCTTGGAATTTTGAAATCAAAAGGTAAAAAAGGATGAATAGAAATAACATTTATAACTTGGCATGTGATTTATTTGTTATTGTAATTATTATTATTATTATTAACAACTGGTGTACTGATTTGATTTTTTAGAAACAGGGAAATAAAAAAAAAATGGTGACAAAGGATTTGGCAGCCATGAAGTAATAGAATAATTAAAGTGTTATATTTAATTTCGAGAAGGAAGTGTACAAGTTACTCGCTAAATAATTTCTATATAGTATAACAATAAACTTTATAATATAAATAAAGAACTTTGACACATTAATCATATAAGAAAAGACATTGCATATCAATGAAATATTCCTAAATTTTCTCTCTCTAAAAAAGAAGAACATATTGTCAACTAGAAACTTAATTGATATATGTGCTAAAGACCGAAATACACGTAGTTCAAATCTCTAACTAAAATAATCAATATATTTCTATATAACAATTGAAATTAATTTATATAAAACTATTAAGTCATTTTCGAGTGGGAGAAAATTCTTTAAATATTTTAAATATATAATTACAAACAAATTAACTTATAAAAATATTAAAAAAAGAGAGAGAATTAAGTAAAAAAAAAAAAACAAAGATAAATTGTTAATTACCAAACACAATCACAAGTATATTACTTGTGTGTGTAAATTGTTAATAGACAAAGATAAAATAAGGCACTATGTGTTAACTATGAAACAATTTTTCTCGTCTTTTTTTTTTTTATTCTCTTTTTTATTCTCTTTACTAACTCTCAGCAGTTTTTACACATACAGGGTTGTGAAACTATGGATCCCAAAGCTCTAAAGCATCAATTTCCGTTTTACGACGACCTTCATACAATTTTTACTGCAAGGATGCAAAAGAATTGGTGGGTCGAAGCCGAAAACCGATCTGGAGGCTCGAAAAGGAAAGCAAACGAGGATCCCAATGGTGATAGGGAATTAGAAAACGAAGAAAAAACAAAAACGAAAAATGGCACAAAAAAGAGGAAATGGAAAAGGGATAATCCTGAAGAACATGAGAGGAATTTGAAGGAAATATTGAAGGATTTTGTGAAAAGAGAGATGGAAATGGAGAGGGAATGGAGAGAAGCATTTAGGGTTAGAGAAGAAGAGAGAAGGTTAAAAGAGGAAGAATGGAGAATGAAAATGGAAGGCATTGAGAGAGAGAAGATGATGATGGAGATTTTATGGAGAGAAAATGAGGACAAAAGAAGGGAAAGAGAAGAAGCAAGAGCTCAGAAAACAGATGCTTTGATCTCTGCTTTGTTGACCAACCTCACGTAATTAAGGTAAGGTTATTGAAGGTATTTGGTAACAAAATTAAGTAACAGTTAAGTTATATATTTGGACAACTTAAAGGATATATTATTACATGATCTAATTCATTATGGACCCGTAATTTTGTATATACAAGTGTGATTTGTTGAGTAAAGACCAGATTACTGTTCTTAGGAGGTTATGTACAACTGTAGGATCAACACAATCAATTCATACATGCAAAGTTTACAGTCCCAAAATACTATGCCGTTCCAACCACACCTATTTGCGATTTGATAGTGAAGGTTTCCCC TTCACACCCATTATTTGACGTTCAAATTCCTCCCTCCTCTCCTTTTCTTTCTCTCATAACCAAATATCCATTAATAATCGCCCCGATCTTTTTCGGAATTTTCCGCGCTATGGAAGATTTTTGCGATCTCCGCCGTGCTGTTTTTCATCGAATCGGCGTTAATGCGGAGGCGGCGGGGGATAGGTTTCCGCCGTGGAGTGTACTGGAGACGAAGGAATTGCTGGCGATTAGAGCGGCTTTGGATAAGAATTTCTCGGAGATGAAACAGAATAGAATGCTTTGGATTTCGGTGGCCGAAAAGATGAAGGCTAAAGGCTTTAATCGAAGCGACGAGCAGTGTAAATGTAAATGGAAAAATCTCGTCACTCGTTATAAGGGTTGTGAAACTATGGATCCCAAAGCTCTAAAGCATCAATTTCCGTTTTACGACGACCTTCATACAATTTTTACTGCAAGGATGCAAAAGAATTGGTGGGTCGAAGCCGAAAACCGATCTGGAGGCTCGAAAAGGAAAGCAAACGAGGATCCCAATGGTGATAGGGAATTAGAAAACGAAGAAAAAACAAAAACGAAAAATGGCACAAAAAAGAGGAAATGGAAAAGGGATAATCCTGAAGAACATGAGAGGAATTTGAAGGAAATATTGAAGGATTTTGTGAAAAGAGAGATGGAAATGGAGAGGGAATGGAGAGAAGCATTTAGGGTTAGAGAAGAAGAGAGAAGGTTAAAAGAGGAAGAATGGAGAATGAAAATGGAAGGCATTGAGAGAGAGAAGATGATGATGGAGATTTTATGGAGAGAAAATGAGGACAAAAGAAGGGAAAGAGAAGAAGCAAGAGCTCAGAAAACAGATGCTTTGATCTCTGCTTTGTTGACCAACCTCACGTAATTAAGGATCAACACAATCAATTCATACATGCAAAGTTTACAGTCCCAAAATACTATGCCGTTCCAACCACACCTATTTGCGATTTGATAGTGAAGGTTTCCCC ATGGAAGATTTTTGCGATCTCCGCCGTGCTGTTTTTCATCGAATCGGCGTTAATGCGGAGGCGGCGGGGGATAGGTTTCCGCCGTGGAGTGTACTGGAGACGAAGGAATTGCTGGCGATTAGAGCGGCTTTGGATAAGAATTTCTCGGAGATGAAACAGAATAGAATGCTTTGGATTTCGGTGGCCGAAAAGATGAAGGCTAAAGGCTTTAATCGAAGCGACGAGCAGTGTAAATGTAAATGGAAAAATCTCGTCACTCGTTATAAGGGTTGTGAAACTATGGATCCCAAAGCTCTAAAGCATCAATTTCCGTTTTACGACGACCTTCATACAATTTTTACTGCAAGGATGCAAAAGAATTGGTGGGTCGAAGCCGAAAACCGATCTGGAGGCTCGAAAAGGAAAGCAAACGAGGATCCCAATGGTGATAGGGAATTAGAAAACGAAGAAAAAACAAAAACGAAAAATGGCACAAAAAAGAGGAAATGGAAAAGGGATAATCCTGAAGAACATGAGAGGAATTTGAAGGAAATATTGAAGGATTTTGTGAAAAGAGAGATGGAAATGGAGAGGGAATGGAGAGAAGCATTTAGGGTTAGAGAAGAAGAGAGAAGGTTAAAAGAGGAAGAATGGAGAATGAAAATGGAAGGCATTGAGAGAGAGAAGATGATGATGGAGATTTTATGGAGAGAAAATGAGGACAAAAGAAGGGAAAGAGAAGAAGCAAGAGCTCAGAAAACAGATGCTTTGATCTCTGCTTTGTTGACCAACCTCACGTAA MEDFCDLRRAVFHRIGVNAEAAGDRFPPWSVLETKELLAIRAALDKNFSEMKQNRMLWISVAEKMKAKGFNRSDEQCKCKWKNLVTRYKGCETMDPKALKHQFPFYDDLHTIFTARMQKNWWVEAENRSGGSKRKANEDPNGDRELENEEKTKTKNGTKKRKWKRDNPEEHERNLKEILKDFVKREMEMEREWREAFRVREEERRLKEEEWRMKMEGIEREKMMMEILWRENEDKRREREEARAQKTDALISALLTNLT* Homology
BLAST of CsGy4G015240 vs. ExPASy Swiss-Prot
Match: O80450 (Trihelix transcription factor GT-3b OS=Arabidopsis thaliana OX=3702 GN=GT-3B PE=1 SV=1) HSP 1 Score: 224.9 bits (572), Expect = 1.0e-57 Identity = 122/251 (48.61%), Postives = 164/251 (65.34%), Query Frame = 0
BLAST of CsGy4G015240 vs. ExPASy Swiss-Prot
Match: Q9SDW0 (Trihelix transcription factor GT-3a OS=Arabidopsis thaliana OX=3702 GN=GT-3A PE=1 SV=1) HSP 1 Score: 198.0 bits (502), Expect = 1.3e-49 Identity = 123/265 (46.42%), Postives = 162/265 (61.13%), Query Frame = 0
BLAST of CsGy4G015240 vs. ExPASy Swiss-Prot
Match: Q9LU92 (Trihelix transcription factor GT-4 OS=Arabidopsis thaliana OX=3702 GN=GT-4 PE=2 SV=1) HSP 1 Score: 69.3 bits (168), Expect = 7.2e-11 Identity = 32/103 (31.07%), Postives = 58/103 (56.31%), Query Frame = 0
BLAST of CsGy4G015240 vs. ExPASy Swiss-Prot
Match: Q9FX53 (Trihelix transcription factor GT-1 OS=Arabidopsis thaliana OX=3702 GN=GT-1 PE=1 SV=1) HSP 1 Score: 63.5 bits (153), Expect = 3.9e-09 Identity = 31/100 (31.00%), Postives = 50/100 (50.00%), Query Frame = 0
BLAST of CsGy4G015240 vs. ExPASy Swiss-Prot
Match: P17040 (Zinc finger and SCAN domain-containing protein 20 OS=Homo sapiens OX=9606 GN=ZSCAN20 PE=1 SV=3) HSP 1 Score: 56.6 bits (135), Expect = 4.8e-07 Identity = 30/90 (33.33%), Postives = 50/90 (55.56%), Query Frame = 0
BLAST of CsGy4G015240 vs. NCBI nr
Match: XP_011653700.1 (trihelix transcription factor GT-3b [Cucumis sativus] >XP_031739717.1 trihelix transcription factor GT-3b [Cucumis sativus] >XP_031739718.1 trihelix transcription factor GT-3b [Cucumis sativus] >KGN54384.1 hypothetical protein Csa_018084 [Cucumis sativus]) HSP 1 Score: 506 bits (1304), Expect = 1.04e-180 Identity = 257/259 (99.23%), Postives = 258/259 (99.61%), Query Frame = 0
BLAST of CsGy4G015240 vs. NCBI nr
Match: XP_008464203.1 (PREDICTED: trihelix transcription factor GT-3b isoform X2 [Cucumis melo] >KAA0059080.1 trihelix transcription factor GT-3b isoform X2 [Cucumis melo var. makuwa]) HSP 1 Score: 464 bits (1194), Expect = 7.06e-164 Identity = 247/263 (93.92%), Postives = 251/263 (95.44%), Query Frame = 0
BLAST of CsGy4G015240 vs. NCBI nr
Match: TYK29247.1 (trihelix transcription factor GT-3b isoform X2 [Cucumis melo var. makuwa]) HSP 1 Score: 463 bits (1191), Expect = 2.02e-163 Identity = 246/263 (93.54%), Postives = 251/263 (95.44%), Query Frame = 0
BLAST of CsGy4G015240 vs. NCBI nr
Match: XP_008464201.1 (PREDICTED: trihelix transcription factor GT-3b isoform X1 [Cucumis melo] >XP_008464202.1 PREDICTED: trihelix transcription factor GT-3b isoform X1 [Cucumis melo]) HSP 1 Score: 458 bits (1178), Expect = 2.32e-161 Identity = 247/268 (92.16%), Postives = 251/268 (93.66%), Query Frame = 0
BLAST of CsGy4G015240 vs. NCBI nr
Match: XP_038883623.1 (trihelix transcription factor GT-3b-like [Benincasa hispida]) HSP 1 Score: 390 bits (1002), Expect = 1.43e-134 Identity = 211/271 (77.86%), Postives = 235/271 (86.72%), Query Frame = 0
BLAST of CsGy4G015240 vs. ExPASy TrEMBL
Match: A0A0A0KZY4 (Myb-like domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G310210 PE=4 SV=1) HSP 1 Score: 506 bits (1304), Expect = 5.06e-181 Identity = 257/259 (99.23%), Postives = 258/259 (99.61%), Query Frame = 0
BLAST of CsGy4G015240 vs. ExPASy TrEMBL
Match: A0A5A7UVF8 (Trihelix transcription factor GT-3b isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold612G00040 PE=4 SV=1) HSP 1 Score: 464 bits (1194), Expect = 3.42e-164 Identity = 247/263 (93.92%), Postives = 251/263 (95.44%), Query Frame = 0
BLAST of CsGy4G015240 vs. ExPASy TrEMBL
Match: A0A1S3CKY0 (trihelix transcription factor GT-3b isoform X2 OS=Cucumis melo OX=3656 GN=LOC103502137 PE=4 SV=1) HSP 1 Score: 464 bits (1194), Expect = 3.42e-164 Identity = 247/263 (93.92%), Postives = 251/263 (95.44%), Query Frame = 0
BLAST of CsGy4G015240 vs. ExPASy TrEMBL
Match: A0A5D3DZE6 (Trihelix transcription factor GT-3b isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1212G00080 PE=4 SV=1) HSP 1 Score: 463 bits (1191), Expect = 9.80e-164 Identity = 246/263 (93.54%), Postives = 251/263 (95.44%), Query Frame = 0
BLAST of CsGy4G015240 vs. ExPASy TrEMBL
Match: A0A1S3CKZ2 (trihelix transcription factor GT-3b isoform X1 OS=Cucumis melo OX=3656 GN=LOC103502137 PE=4 SV=1) HSP 1 Score: 458 bits (1178), Expect = 1.12e-161 Identity = 247/268 (92.16%), Postives = 251/268 (93.66%), Query Frame = 0
BLAST of CsGy4G015240 vs. TAIR 10
Match: AT2G38250.1 (Homeodomain-like superfamily protein ) HSP 1 Score: 224.9 bits (572), Expect = 7.3e-59 Identity = 122/251 (48.61%), Postives = 164/251 (65.34%), Query Frame = 0
BLAST of CsGy4G015240 vs. TAIR 10
Match: AT5G01380.1 (Homeodomain-like superfamily protein ) HSP 1 Score: 198.0 bits (502), Expect = 9.5e-51 Identity = 123/265 (46.42%), Postives = 162/265 (61.13%), Query Frame = 0
BLAST of CsGy4G015240 vs. TAIR 10
Match: AT3G25990.1 (Homeodomain-like superfamily protein ) HSP 1 Score: 69.3 bits (168), Expect = 5.1e-12 Identity = 32/103 (31.07%), Postives = 58/103 (56.31%), Query Frame = 0
BLAST of CsGy4G015240 vs. TAIR 10
Match: AT1G13450.1 (Homeodomain-like superfamily protein ) HSP 1 Score: 63.5 bits (153), Expect = 2.8e-10 Identity = 31/100 (31.00%), Postives = 50/100 (50.00%), Query Frame = 0
BLAST of CsGy4G015240 vs. TAIR 10
Match: AT1G13450.2 (Homeodomain-like superfamily protein ) HSP 1 Score: 63.5 bits (153), Expect = 2.8e-10 Identity = 31/100 (31.00%), Postives = 50/100 (50.00%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (Gy14) v2.1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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