CsGy4G011325 (gene) Cucumber (Gy14) v2.1

Overview
NameCsGy4G011325
Typegene
OrganismCucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
DescriptionUnknown protein
LocationGy14Chr4: 10703985 .. 10704224 (+)
RNA-Seq ExpressionCsGy4G011325
SyntenyCsGy4G011325
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGCTTGCTTGGAGGATGCTTGCACTTTGTTGTGGGCGTCGTTTGGGCTTGCTTGTTCTTGAGGATACGAGATGACTTGCGTTTGCTTCCTTCTTGGTGGAAGGTTTTAGTCAGAATGTTGGGCCCCTACGTCCAGTGGGGAGTGAGAGCGGGATGTCGAGTTGATGTGCTTGGATGGGCTTGCTTGGATGATGCTTGCACTTTGTTGTGGGCATCGTTTGGGCTTGCTTGTTCTTGA

mRNA sequence

ATGGGCTTGCTTGGAGGATGCTTGCACTTTGTTGTGGGCGTCGTTTGGGCTTGCTTGTTCTTGAGGATACGAGATGACTTGCGTTTGCTTCCTTCTTGGTGGAAGGTTTTAGTCAGAATGTTGGGCCCCTACGTCCAGTGGGGAGTGAGAGCGGGATGTCGAGTTGATGTGCTTGGATGGGCTTGCTTGGATGATGCTTGCACTTTGTTGTGGGCATCGTTTGGGCTTGCTTGTTCTTGA

Coding sequence (CDS)

ATGGGCTTGCTTGGAGGATGCTTGCACTTTGTTGTGGGCGTCGTTTGGGCTTGCTTGTTCTTGAGGATACGAGATGACTTGCGTTTGCTTCCTTCTTGGTGGAAGGTTTTAGTCAGAATGTTGGGCCCCTACGTCCAGTGGGGAGTGAGAGCGGGATGTCGAGTTGATGTGCTTGGATGGGCTTGCTTGGATGATGCTTGCACTTTGTTGTGGGCATCGTTTGGGCTTGCTTGTTCTTGA

Protein sequence

MGLLGGCLHFVVGVVWACLFLRIRDDLRLLPSWWKVLVRMLGPYVQWGVRAGCRVDVLGWACLDDACTLLWASFGLACS*
Homology
BLAST of CsGy4G011325 vs. NCBI nr
Match: KAE8637137.1 (hypothetical protein CSA_015444, partial [Cucumis sativus])

HSP 1 Score: 108 bits (270), Expect = 1.56e-28
Identity = 53/79 (67.09%), Postives = 57/79 (72.15%), Query Frame = 0

Query: 4   LGGCLHFVVGVVWA---CLFLRIRDDLRLLPSWWKVLVRMLGPYVQWGVRAGCRVDVLGW 63
           LG CL  +  ++WA   CL L IRDDLRLL   WK LV +   YV W   AGCRVDVLGW
Sbjct: 23  LGACLIMLALLLWASWACLLLTIRDDLRLLRGCWKGLVELPSLYVGWVASAGCRVDVLGW 82

Query: 64  ACLDDACTLLWASFGLACS 79
           ACLDDACTLLWASFGLACS
Sbjct: 83  ACLDDACTLLWASFGLACS 101

BLAST of CsGy4G011325 vs. NCBI nr
Match: KAE8637134.1 (hypothetical protein CSA_015441 [Cucumis sativus] >KAE8652005.1 hypothetical protein Csa_021690 [Cucumis sativus])

HSP 1 Score: 95.1 bits (235), Expect = 4.34e-23
Identity = 46/55 (83.64%), Postives = 47/55 (85.45%), Query Frame = 0

Query: 24 RDDLRLLPSWWKV-LVRMLGPYVQWGVRAGCRVDVLGWACLDDACTLLWASFGLA 77
          RDDLRLL +   V LV MLGPY  WGVRAGCRVDVLGWACLDDACTLLWASFGLA
Sbjct: 2  RDDLRLLLALTDVALVGMLGPYFGWGVRAGCRVDVLGWACLDDACTLLWASFGLA 56

BLAST of CsGy4G011325 vs. NCBI nr
Match: KAE8637136.1 (hypothetical protein CSA_015443 [Cucumis sativus] >KAE8652004.1 hypothetical protein Csa_021697 [Cucumis sativus])

HSP 1 Score: 87.4 bits (215), Expect = 1.92e-20
Identity = 36/40 (90.00%), Postives = 38/40 (95.00%), Query Frame = 0

Query: 40 MLGPYVQWGVRAGCRVDVLGWACLDDACTLLWASFGLACS 79
          MLGPYV WGVRAGCRVD+LGWACLDDACTLLW SFG+ACS
Sbjct: 1  MLGPYVGWGVRAGCRVDLLGWACLDDACTLLWVSFGVACS 40

BLAST of CsGy4G011325 vs. NCBI nr
Match: KAE8637539.1 (hypothetical protein CSA_017395 [Cucumis sativus])

HSP 1 Score: 87.4 bits (215), Expect = 1.43e-19
Identity = 36/40 (90.00%), Postives = 38/40 (95.00%), Query Frame = 0

Query: 40  MLGPYVQWGVRAGCRVDVLGWACLDDACTLLWASFGLACS 79
           MLGPYV WGVRAGCRVD+LGWACLDDACTLLW SFG+ACS
Sbjct: 77  MLGPYVGWGVRAGCRVDLLGWACLDDACTLLWVSFGVACS 116

BLAST of CsGy4G011325 vs. NCBI nr
Match: KGN64818.2 (hypothetical protein Csa_022817, partial [Cucumis sativus])

HSP 1 Score: 81.6 bits (200), Expect = 2.54e-18
Identity = 35/37 (94.59%), Postives = 35/37 (94.59%), Query Frame = 0

Query: 43 PYVQWGVRAGCRVDVLGWACLDDACTLLWASFGLACS 79
          PYV WGVRAG RVDVLGWACLDDACTLLWASFGLACS
Sbjct: 29 PYVGWGVRAGSRVDVLGWACLDDACTLLWASFGLACS 65

BLAST of CsGy4G011325 vs. ExPASy TrEMBL
Match: A0A5A7SJC7 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold447G00850 PE=4 SV=1)

HSP 1 Score: 67.4 bits (163), Expect = 2.92e-11
Identity = 27/38 (71.05%), Postives = 31/38 (81.58%), Query Frame = 0

Query: 41 LGPYVQWGVRAGCRVDVLGWACLDDACTLLWASFGLAC 78
          +G Y+ WGVRAGCRVDVLGWACLD+ACT LW +   AC
Sbjct: 1  MGLYIGWGVRAGCRVDVLGWACLDNACTSLWVNSRRAC 38

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
KAE8637137.11.56e-2867.09hypothetical protein CSA_015444, partial [Cucumis sativus][more]
KAE8637134.14.34e-2383.64hypothetical protein CSA_015441 [Cucumis sativus] >KAE8652005.1 hypothetical pro... [more]
KAE8637136.11.92e-2090.00hypothetical protein CSA_015443 [Cucumis sativus] >KAE8652004.1 hypothetical pro... [more]
KAE8637539.11.43e-1990.00hypothetical protein CSA_017395 [Cucumis sativus][more]
KGN64818.22.54e-1894.59hypothetical protein Csa_022817, partial [Cucumis sativus][more]
Match NameE-valueIdentityDescription
A0A5A7SJC72.92e-1171.05Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsGy4G011325.1CsGy4G011325.1mRNA