CsGy4G010650 (gene) Cucumber (Gy14) v2.1

Overview


Name	CsGy4G010650
Type	gene
Organism	Cucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
Description	binding partner of ACD11 1-like
Location	Gy14Chr4: 9784636 .. 9790241 (+)
RNA-Seq Expression	CsGy4G010650
Synteny	CsGy4G010650

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CATACAACATAATTGCATTTTTGAAACTTCATACAAAGTACTAACGGTTGATCTAAAAGTGTAAATTTCACTTTGCCATATATTAAAATTTAGCATTTCTTTTAAGAAGAAAAGCAAAGTTTAATTTTCTTGCTTTTTATCTCTCTCACGCTCTGTCGAGTGATTCTTTCTTTCAAATTGCTTCCAACCTCCAACCTCTACAACTTCCTCTCTATCTCTACAAGAAATTCGCCAAATTCTTCAATCATTAGCTATGCAGGTAACAGATCATTCAATTTCCATTACTTTCTTCAACTTTTGCTTCTCTGATTTCCATTATCAACTTCAATTGATTTCTTCTCTTCAGTCTCAGACTCGGACGGTTCAAGTCAAGCACGTTTCGAATCTAGCTACTGAGAGGGAGATAAACGAGTTCTTCTCCTTCTCTGGACAAATTGAACGCATTGAGATTCAATGGTAGCTCATTAACTCTGTGTTACTCTGAACTGAATTGCAAACAGAAGTTGATTATGATTCCCTTCTCTATGCGGTTGATTTCGTTATTGTAGGTTTCTTATTAAATGTAGGTTGCAATTAATAAGCATGAGGCTTGTAAACTCGTAATACTAGCTTCCTAGTAATTAAGGAATCCCTTGCTGAGTTTTGAAAAATGGTAGAAATGTAATTGTCGAACTTATGGTTTCAACCACTATAAAAGGAGGAAATGCCTTTAGTTTGAAATTGTCCCAGTTATAAAGATACACTTTAAGTTTGAGTATGCTAACTCTTGTTAAATTCTCTTCTGTTTTATCTTCTCTAGTTTGAGAGTGAACTTAAAGGGTGTGAGTACTGAGTAGTATGAAAATTTTGAAAGAGTGCTCTTGGAATTGGGATCGGATAGAGGATTATTCAACATGATTGTAACAAGTTTTTGTATGGTGAATTTCTTTTTGGAATCATGGTTTTTCTCTGGTTTGGAGGATGTTTTTTTACGCTAATTCTTGTGTTCCCAGTTTTATTGCTTTCTTTTAGTTTCTCTATTATTATTTTTTTCTTGCTTATTCATGCGGTAGTCTTGGGAAGCTTTTCCCAACAATATAATTTTTGAGCCAACCTCACTCTTGAGAAGATAAGAAGGGTCTGATGGATTGTAACTTGTATTTATCTTTACTTTACCACTGTGATGCAGTGTTGAGTAAGCAATTGCTTGAGTGTTATTCTAATTTATTCTTGTTGGTGCAGTGAACAAGGGGATTCCAGGACTGCGTTCGTCACATTTAGAGATCCCAAAGCTCTTGAAATTGCCTTGCTATTATCGGTATTTTATTATCTCAATTCTCTTTCATATCCACGAAGTCATTATCATGTTGAGCTTGTGGTTTTGCAATGAATGTCAGAAGTTTGGTTCATGTTGGTCTACATTTGGCTGTAAATACCTTCTTATTTAATATGTGTTGTTTTTAAGTGTCCAGTTAGTTCTATATCATCTTTAGTTTTCCCCCCTTCATTTTTCTTCCATTAATTTTGATTGAATTGAAAAGTGGTGGATGAGTGTCATCTTGATTTTTTCCCCTTTCCTTTTCCTAATGAAATACATTTTTTCAGAAAAAAGATTTTCTACTCGTAACCTCAAACATAACAGGAGGAACTTTTTTATAGCTGTAAATGTAATATACGCTGTTTTAGTAGAAGTTCCTCTGTTTTTGTATTTTGTCTGTCTGATCACCACCTTAGTCTTTCTAATAATAATAATAAGAAGAAAAATTATTTTAAATGACAAAGCTTCTAAAAATATTTACAAATATAGCAAAATATTAGATCTATATGTGATAGATCACAATAGACTAAGATAGATTACTATCTATGTCTATGATGATACAGTAGACATGGACACAGATAGAAGTTTATCTTGCATGTTTCTAGAAAAATAGGGAACCGATACTTTTTCTTTGCATGATCATTGCTTTACTCAATAATGGAATTATTTAATATTTTCCTTTTCATCGTGCAATAGTGGAAATAGACCTCTTTTTCTTCTTATCTTGTCAATGCCATAAGCTACTGTAAACAATTTCAATCATTTATTTATATGCCATTCAGGGAGCGACAATTGTAGATCAGATTGTGAGCATATCTCCTGTTGAAAATCATGTACCAAGAAGAGAAATGCAGGTACTATTCTTATATTTGAATATGTTTCAAGGCTCGCCTAGTTGTTTATTCTATATTCAATATTTTAAATTTACTATGTTTGCTGGAAGTACGGGTTGTGGACAATGCTGCTGCATGTCTTACACCTACAGAAAATAATTTTCCTAGCACTGAGGTAAATGTGTTGACCCCACTCTATGAATATCAAGTAGCATTTGAGTAGCATTTCGTTCCCATTGATAATATACTTGTTGGAATGCTTTGAATTTGTTATTTGGCGCGTCAAATGACCAATTACAGAGGCACCTCTTTAACTGTAATTTGAATTATTCTATCAAATAATAAATTCCCTCCCTCTCTTCTTGGACATAGCCTATCACATTGTTCGCGAACCATGTAAATCTATAAGTCGTTTCTCTATTGTTTACGTTTTGTCAATTGCATAACAATACTATCAAAGAAAAACCAAGAGGCTGAAGAGTTTCATCAAATGAAAAAGTTTAGGACTTGTTTCTTGTTTACTGTCTTTCGATTTTCTTAAATTGATGTAGATGGATGAAAACTGAAAAGTAAAACCTCCCTTTAGTGCCTGTCTGTCCTGAACCTCATTACACTTCTATAACTAGGGTGAAGAGCTGGTGAAACAGTTTCACACTTTTAGTTTTCATGCGGATGGTGAAAGAGTTCCTTGGTTTATTTAACTATACAAGTGGATGGTGAGGCACCTTATCTTTTTTCCACCTTAAATCTTTTGATGTTTCAGGATTCTGGAAGCCAGTCTAGCAGTGGAAAAATGTATGTTAATAGAGCGCAAGAAGTAGTTGCAAATGTGCTTGCTAAGGGTTCAGCAATCGGACAAGATGCCATGAACAAAGCAAAGGCATTTGACGAAAAGCATCAGCTAACAGCTAATGCATCTGCAAAGGTATTGTCCTTTGACAGAAGAGTTGGGCTGACAGAGAAATTGACGGTTGGGATATCAGTGGTTAACGAGAAAGTCAAGTCTGTCGATCAAAATCTTCACGTTTCAGATAAAACAAGGGCTGCAATCTTTGCAGCTGAGAGGAAACTCAATGACACAGGATCTGCTGTTAAAACAAGCAAGTATGAGTCATCATTCCTGAGGAAACTTTTGTTCGCATTTTCATTCACACTACTCATTTCTGTTAGCTTATCCCCTAATTAAGCATCCTTTACTTCCCTTCCACTTGCTATCTTCAAATTTTAGAACTCGAATATTCTCCACGCCTTGCAGGAAAGCAGAAAATTGATGGTATTTGAGATGTTGAGCTGGTTATTATAGTTAGTGGGTTATAATAGTCTATATTTGGGGTACGTGGGGTACATACTGTTCTAGTCTAGATTGTAATAGTCTATGTTCAGGGGATAGACGGTTTTATTCTGTGTAGAAAATAGTAAACACACTGTGATAGTAAACACACTATGACAAAGAAGGAAATAGAGGATGAGTAGCACAAAGTAGGATTTGAAATAGGTAACATATAATTAGTTGTAGATTATAATAATTGGAAACCCCAATTATAGTTCACCCACTTGAAGTTGGGGCCAAACACTCCCTTTAGTTTTCTATAATAGCTCCTAAGCAACTCCTAAGTGTAACTTATTGACCTTTAGATCGGTATAGTCGTATATTTCTATTATCCAAATAATTTACAATGGTTCTACTATCCTTTATGACAATAGACGGAAGTGAATTTGATTGTTTCACTCTATCTTGGCGTTGAACAGGTATGTGACAGCAAGTGCTGCTTGGCTAAATGGTGCTTTTGGCAAGATCGCAAAAGCAGGGCAGGCAGCGGGAACAAAAACTAGAGAGAAATTCCATTTGGCCATGTCAAACTTAACTTCAAAGGTGCGTTTATGAATGGCGACGTAAAAGTTAGGATTTTCTTGAACTGGGTTGGTGTAACTAAGAACAATCATAGAAACAATAGGTTTTATAAATTAGGTATTGTTTGATATCTATTTCGTTTTCGGTCTTTTTTTCAAATAAGTCTATTTTTTTTACCGTGATTTGCATCTTCTCACATTTTTAGTCAATTGTCTTTTAAAAACTAATTTTTTAGTTTTTAAAACTCTAGTAAAGAGTAGATAGCAAAGCAAGAAATTTGGAAGTGGTAGGAGTTGTTGTACTTAATTTTTAAGAACTAAAAACTAAAACCAAATGGTTACTAAAAAAATGGAGCCTTAATTATTCGTATATTTTTCTAATTTTCTGTTTTATGAATTAGCCAAAACAATGTTAAAAAAGGAAGTCTGCCAAAAGAATTTAGGTTGTTTGGAGTCCTAAAGAAAAGCACAAGTAATTAATAACAATAACAAGTAGTATTAATTAAAAGAGACCGTTAGTAAATAAAGAGCTAGATTCAAAGTATTAATATATATAACAACATTTAAAAAAGATGCAAATGTAGCAAAATCTATCAAAGTCTATCATTGATAAGCTATGCTATATTTGTTATTTTTTAATTTGTTGCTATAACTCTTCGTTATTATCCCTTAAAATTGCTACCATTATAATTACTCTATTTAAAATCAACATCTTAACGAAAGGTTTAGCCAAATCTATGGCAAAAGATGAACGGTTCCTAGTCGAGAGAAATCTCTTTACAACCTTGTTTCTTTAAAAGCTTCTTTCAAACAATCAAGATTTACCTTTACCTGTTTGAATTCATTTTTTTCTCTCCTGAAAATACAACAAATCTGGGCTTAAACAAGCATCTGTAAGTCAATAAAAAAGTGTTTGTAAGCTCTTTTGGGAATTTGTTCAAACAGATCTTCAAAGACTTGCAAGATTAAAAGAAATAGCTGATAAAAAGAAAAAAAGTAAAACTAAAATTTTGTTAGGTAACTATTTTGTTTTTAGTTTCTGAAATTTATGTTTGTTTTCTCATACTTTTTCTATTATTATTATTATTATTATTTTTACCTATCTAAATAAACACTTGAATATGTAGTGAAATTCCTAAACTGAAAAAACTAATTTTTCAATTTTCAAAATTAGGTTAGCTTTCCCAAACATGTGCAGTAAGTGCTCACAAAGGTTAGAAACTTATGAGTGGTAATAGCATTTATTAACTTCATTAATGATTATCAAACAAGCATTAAAGATTAGGAGTTCTTTTTAGTTGGAAGTGTAGAAGAAGATCCATTATTGTTGGATTTATGAAACTGACCTTTATTTGTTATTTGAAACATGTAGGAATCCCCTGTTGTTGCCTCATCTTGAAAGCTTAGGCTTCAAGAAACTCAATTGGCTTTGGCTGCTTCTATTTGTACTCTGTTTCTTTTCATTCTATTTCTTCAGATTATTTTCTCTTCAGGACTTTGCTCTATTATTATTATTACTATTTGTATTTTTTTTTATTCATATTCTTTAACTAAACTATAAGGGTGTTTGGCTGATGAGAATTTTGTATTTGTAAGATTGGTCATGGAAGTGTAAAGAAAATCCA

mRNA sequence

CATACAACATAATTGCATTTTTGAAACTTCATACAAAGTACTAACGGTTGATCTAAAAGTGTAAATTTCACTTTGCCATATATTAAAATTTAGCATTTCTTTTAAGAAGAAAAGCAAAGTTTAATTTTCTTGCTTTTTATCTCTCTCACGCTCTGTCGAGTGATTCTTTCTTTCAAATTGCTTCCAACCTCCAACCTCTACAACTTCCTCTCTATCTCTACAAGAAATTCGCCAAATTCTTCAATCATTAGCTATGCAGTCTCAGACTCGGACGGTTCAAGTCAAGCACGTTTCGAATCTAGCTACTGAGAGGGAGATAAACGAGTTCTTCTCCTTCTCTGGACAAATTGAACGCATTGAGATTCAATGTGAACAAGGGGATTCCAGGACTGCGTTCGTCACATTTAGAGATCCCAAAGCTCTTGAAATTGCCTTGCTATTATCGGGAGCGACAATTGTAGATCAGATTGTGAGCATATCTCCTGTTGAAAATCATGTACCAAGAAGAGAAATGCAGGATTCTGGAAGCCAGTCTAGCAGTGGAAAAATGTATGTTAATAGAGCGCAAGAAGTAGTTGCAAATGTGCTTGCTAAGGGTTCAGCAATCGGACAAGATGCCATGAACAAAGCAAAGGCATTTGACGAAAAGCATCAGCTAACAGCTAATGCATCTGCAAAGGTATTGTCCTTTGACAGAAGAGTTGGGCTGACAGAGAAATTGACGGTTGGGATATCAGTGGTTAACGAGAAAGTCAAGTCTGTCGATCAAAATCTTCACGTTTCAGATAAAACAAGGGCTGCAATCTTTGCAGCTGAGAGGAAACTCAATGACACAGGATCTGCTGTTAAAACAAGCAAGTATGTGACAGCAAGTGCTGCTTGGCTAAATGGTGCTTTTGGCAAGATCGCAAAAGCAGGGCAGGCAGCGGGAACAAAAACTAGAGAGAAATTCCATTTGGCCATGTCAAACTTAACTTCAAAGGAATCCCCTGTTGTTGCCTCATCTTGAAAGCTTAGGCTTCAAGAAACTCAATTGGCTTTGGCTGCTTCTATTTGTACTCTGTTTCTTTTCATTCTATTTCTTCAGATTATTTTCTCTTCAGGACTTTGCTCTATTATTATTATTACTATTTGTATTTTTTTTTATTCATATTCTTTAACTAAACTATAAGGGTGTTTGGCTGATGAGAATTTTGTATTTGTAAGATTGGTCATGGAAGTGTAAAGAAAATCCA

Coding sequence (CDS)

ATGCAGTCTCAGACTCGGACGGTTCAAGTCAAGCACGTTTCGAATCTAGCTACTGAGAGGGAGATAAACGAGTTCTTCTCCTTCTCTGGACAAATTGAACGCATTGAGATTCAATGTGAACAAGGGGATTCCAGGACTGCGTTCGTCACATTTAGAGATCCCAAAGCTCTTGAAATTGCCTTGCTATTATCGGGAGCGACAATTGTAGATCAGATTGTGAGCATATCTCCTGTTGAAAATCATGTACCAAGAAGAGAAATGCAGGATTCTGGAAGCCAGTCTAGCAGTGGAAAAATGTATGTTAATAGAGCGCAAGAAGTAGTTGCAAATGTGCTTGCTAAGGGTTCAGCAATCGGACAAGATGCCATGAACAAAGCAAAGGCATTTGACGAAAAGCATCAGCTAACAGCTAATGCATCTGCAAAGGTATTGTCCTTTGACAGAAGAGTTGGGCTGACAGAGAAATTGACGGTTGGGATATCAGTGGTTAACGAGAAAGTCAAGTCTGTCGATCAAAATCTTCACGTTTCAGATAAAACAAGGGCTGCAATCTTTGCAGCTGAGAGGAAACTCAATGACACAGGATCTGCTGTTAAAACAAGCAAGTATGTGACAGCAAGTGCTGCTTGGCTAAATGGTGCTTTTGGCAAGATCGCAAAAGCAGGGCAGGCAGCGGGAACAAAAACTAGAGAGAAATTCCATTTGGCCATGTCAAACTTAACTTCAAAGGAATCCCCTGTTGTTGCCTCATCTTGA

Protein sequence

MQSQTRTVQVKHVSNLATEREINEFFSFSGQIERIEIQCEQGDSRTAFVTFRDPKALEIALLLSGATIVDQIVSISPVENHVPRREMQDSGSQSSSGKMYVNRAQEVVANVLAKGSAIGQDAMNKAKAFDEKHQLTANASAKVLSFDRRVGLTEKLTVGISVVNEKVKSVDQNLHVSDKTRAAIFAAERKLNDTGSAVKTSKYVTASAAWLNGAFGKIAKAGQAAGTKTREKFHLAMSNLTSKESPVVASS*

Homology

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BLAST of CsGy4G010650 vs. ExPASy Swiss-Prot
Match: Q9LFD5 (Binding partner of ACD11 1 OS=Arabidopsis thaliana OX=3702 GN=BPA1 PE=1 SV=1)

HSP 1 Score: 198.0 bits (502), Expect = 1.3e-49
Identity = 109/236 (46.19%), Postives = 163/236 (69.07%), Query Frame = 0


Query: 1   MQSQTRTVQVKHVSNLATEREINEFFSFSGQIERIEIQCEQGDSRTAFVTFRDPKALEIA 60
           M SQ R+V+V ++S+ ATE +I EFFSFSG++E I+I   Q +  +A+VTF++ +  E A
Sbjct: 1   MASQVRSVKVGNLSSGATEHDIKEFFSFSGEVESIDI---QSNEHSAYVTFKETQGAETA 60

Query: 61  LLLSGATIVDQIVSISPVENH----VPRREMQDSGSQSSSGKMYVNRAQEVVANVLAKGS 120
           +LLSGA+I DQ V I    N+     P  E Q SG++S      V +A++VV+++LAKG 
Sbjct: 61  VLLSGASIADQSVIIELAPNYSPPAAPHAETQSSGAES-----VVQKAEDVVSSMLAKGF 120

Query: 121 AIGQDAMNKAKAFDEKHQLTANASAKVLSFDRRVGLTEKLTVGISVVNEKVKSVDQNLHV 180
            +G+DA+ KAKAFDEKH  T+ A+A V S D+++GL++KLT G S+VNEK+K+VDQN  V
Sbjct: 121 ILGKDAVGKAKAFDEKHGFTSTATAGVASLDQKIGLSQKLTAGTSLVNEKIKAVDQNFQV 180

Query: 181 SDKTRAAIFAAERKLNDTGSAVKTSKYVTASAAWLNGAFGKIAKAGQAAGTKTREK 233
           +++T++   AAE+ ++  GSAV  ++YV    +W  GAF ++A+A    G KT+EK
Sbjct: 181 TERTKSVYAAAEQTVSSAGSAVMKNRYVLTGVSWAAGAFNRVAQAAGEVGQKTKEK 228

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BLAST of CsGy4G010650 vs. ExPASy Swiss-Prot
Match: P87216 (Protein vip1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=vip1 PE=1 SV=1)

HSP 1 Score: 58.9 bits (141), Expect = 9.4e-08
Identity = 52/226 (23.01%), Postives = 97/226 (42.92%), Query Frame = 0


Query: 8   VQVKHVSNLATEREINEFFSFSGQIERIEIQCEQGDSRTAFVTFRDPKALEIALLLSGAT 67
           V V ++S   TE++I++FFSF G++  I  + + G+++TA + F  P A + ALLL  A 
Sbjct: 5   VIVTNISPEVTEKQISDFFSFCGKVSNISTE-KSGETQTAKIQFERPSATKTALLLQDAL 64

Query: 68  IVDQIVSISPVENHVPRREMQDSGSQSSSGKMYVNRAQEVVANVLAKGSAIGQDAMNKAK 127
           +    + I+  +        Q       + +        +++ +L++G  +    + K+ 
Sbjct: 65  LGQNKIQITSEDGGAASTTDQGGAGGDQAARQEDKPRSAIISELLSRGYHLSDVTLEKSI 124

Query: 128 AFDEKHQLTANASAKVLSFDRRVGLTEKLTVGISVVNEKVKSVDQNLHVSDKTRAAIFAA 187
             D+ + +++             G+ E    G+  VNE+    ++   V +K     FA 
Sbjct: 125 QLDQSYGVSSKFK----------GILESALSGVRSVNERYHVTEKANEVDNK-----FAI 184

Query: 188 ERKLNDTGSAVKTSKYVTASAAWLNGAFGKIAKAGQAAGTKTREKF 234
             KLN T S V T  +     A           AG +AG K +  +
Sbjct: 185 SDKLNRTSSLVSTYFHKALETA-----------AGTSAGQKVQNAY 203

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BLAST of CsGy4G010650 vs. NCBI nr
Match: XP_004149115.1 (binding partner of ACD11 1 isoform X1 [Cucumis sativus])

HSP 1 Score: 471 bits (1212), Expect = 5.97e-167
Identity = 251/251 (100.00%), Postives = 251/251 (100.00%), Query Frame = 0


Query: 1   MQSQTRTVQVKHVSNLATEREINEFFSFSGQIERIEIQCEQGDSRTAFVTFRDPKALEIA 60
           MQSQTRTVQVKHVSNLATEREINEFFSFSGQIERIEIQCEQGDSRTAFVTFRDPKALEIA
Sbjct: 1   MQSQTRTVQVKHVSNLATEREINEFFSFSGQIERIEIQCEQGDSRTAFVTFRDPKALEIA 60

Query: 61  LLLSGATIVDQIVSISPVENHVPRREMQDSGSQSSSGKMYVNRAQEVVANVLAKGSAIGQ 120
           LLLSGATIVDQIVSISPVENHVPRREMQDSGSQSSSGKMYVNRAQEVVANVLAKGSAIGQ
Sbjct: 61  LLLSGATIVDQIVSISPVENHVPRREMQDSGSQSSSGKMYVNRAQEVVANVLAKGSAIGQ 120

Query: 121 DAMNKAKAFDEKHQLTANASAKVLSFDRRVGLTEKLTVGISVVNEKVKSVDQNLHVSDKT 180
           DAMNKAKAFDEKHQLTANASAKVLSFDRRVGLTEKLTVGISVVNEKVKSVDQNLHVSDKT
Sbjct: 121 DAMNKAKAFDEKHQLTANASAKVLSFDRRVGLTEKLTVGISVVNEKVKSVDQNLHVSDKT 180

Query: 181 RAAIFAAERKLNDTGSAVKTSKYVTASAAWLNGAFGKIAKAGQAAGTKTREKFHLAMSNL 240
           RAAIFAAERKLNDTGSAVKTSKYVTASAAWLNGAFGKIAKAGQAAGTKTREKFHLAMSNL
Sbjct: 181 RAAIFAAERKLNDTGSAVKTSKYVTASAAWLNGAFGKIAKAGQAAGTKTREKFHLAMSNL 240

Query: 241 TSKESPVVASS 251
           TSKESPVVASS
Sbjct: 241 TSKESPVVASS 251

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BLAST of CsGy4G010650 vs. NCBI nr
Match: XP_011653468.1 (binding partner of ACD11 1 isoform X2 [Cucumis sativus] >KAE8649369.1 hypothetical protein Csa_019146 [Cucumis sativus])

HSP 1 Score: 458 bits (1178), Expect = 9.09e-162
Identity = 244/245 (99.59%), Postives = 244/245 (99.59%), Query Frame = 0


Query: 1   MQSQTRTVQVKHVSNLATEREINEFFSFSGQIERIEIQCEQGDSRTAFVTFRDPKALEIA 60
           MQSQTRTVQVKHVSNLATEREINEFFSFSGQIERIEIQCEQGDSRTAFVTFRDPKALEIA
Sbjct: 1   MQSQTRTVQVKHVSNLATEREINEFFSFSGQIERIEIQCEQGDSRTAFVTFRDPKALEIA 60

Query: 61  LLLSGATIVDQIVSISPVENHVPRREMQDSGSQSSSGKMYVNRAQEVVANVLAKGSAIGQ 120
           LLLSGATIVDQIVSISPVENHVPRREMQDSGSQSSSGKMYVNRAQEVVANVLAKGSAIGQ
Sbjct: 61  LLLSGATIVDQIVSISPVENHVPRREMQDSGSQSSSGKMYVNRAQEVVANVLAKGSAIGQ 120

Query: 121 DAMNKAKAFDEKHQLTANASAKVLSFDRRVGLTEKLTVGISVVNEKVKSVDQNLHVSDKT 180
           DAMNKAKAFDEKHQLTANASAKVLSFDRRVGLTEKLTVGISVVNEKVKSVDQNLHVSDKT
Sbjct: 121 DAMNKAKAFDEKHQLTANASAKVLSFDRRVGLTEKLTVGISVVNEKVKSVDQNLHVSDKT 180

Query: 181 RAAIFAAERKLNDTGSAVKTSKYVTASAAWLNGAFGKIAKAGQAAGTKTREKFHLAMSNL 240
           RAAIFAAERKLNDTGSAVKTSKYVTASAAWLNGAFGKIAKAGQAAGTKTREKFHLAMSNL
Sbjct: 181 RAAIFAAERKLNDTGSAVKTSKYVTASAAWLNGAFGKIAKAGQAAGTKTREKFHLAMSNL 240

Query: 241 TSKES 245
           TSK S
Sbjct: 241 TSKVS 245

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BLAST of CsGy4G010650 vs. NCBI nr
Match: XP_008441996.1 (PREDICTED: binding partner of ACD11 1-like isoform X2 [Cucumis melo])

HSP 1 Score: 452 bits (1163), Expect = 1.63e-159
Identity = 239/249 (95.98%), Postives = 245/249 (98.39%), Query Frame = 0


Query: 1   MQSQTRTVQVKHVSNLATEREINEFFSFSGQIERIEIQCEQGDSRTAFVTFRDPKALEIA 60
           MQSQTRTVQVKHVSNLATEREINEFFSFSG+IE IEIQCEQG+SRTAFVTFRDPKALEIA
Sbjct: 1   MQSQTRTVQVKHVSNLATEREINEFFSFSGEIEHIEIQCEQGESRTAFVTFRDPKALEIA 60

Query: 61  LLLSGATIVDQIVSISPVENHVPRREMQDSGSQSSSGKMYVNRAQEVVANVLAKGSAIGQ 120
           LLLSGATIVDQ VSISPVENHVPRREMQDSGSQ SSGKMYVNRAQEVVANVLAKGS IGQ
Sbjct: 61  LLLSGATIVDQTVSISPVENHVPRREMQDSGSQPSSGKMYVNRAQEVVANVLAKGSVIGQ 120

Query: 121 DAMNKAKAFDEKHQLTANASAKVLSFDRRVGLTEKLTVGISVVNEKVKSVDQNLHVSDKT 180
           DAMNKAKAFDEKH+LTA+ASAKVLSFDRRVGLTEKLTVGISVVNEKVKSVDQNLHVSDKT
Sbjct: 121 DAMNKAKAFDEKHRLTASASAKVLSFDRRVGLTEKLTVGISVVNEKVKSVDQNLHVSDKT 180

Query: 181 RAAIFAAERKLNDTGSAVKTSKYVTASAAWLNGAFGKIAKAGQAAGTKTREKFHLAMSNL 240
           RAAIFAAERKL+DTGSAVKTSKYVTASAAWLNGAFGK+AKAGQAAGTKTREKFHLAMSNL
Sbjct: 181 RAAIFAAERKLSDTGSAVKTSKYVTASAAWLNGAFGKVAKAGQAAGTKTREKFHLAMSNL 240

Query: 241 TSKESPVVA 249
           TSKESPVVA
Sbjct: 241 TSKESPVVA 249

[Close]

BLAST of CsGy4G010650 vs. NCBI nr
Match: TYK08404.1 (binding partner of ACD11 1-like isoform X2 [Cucumis melo var. makuwa])

HSP 1 Score: 441 bits (1135), Expect = 2.71e-155
Identity = 233/243 (95.88%), Postives = 239/243 (98.35%), Query Frame = 0


Query: 1   MQSQTRTVQVKHVSNLATEREINEFFSFSGQIERIEIQCEQGDSRTAFVTFRDPKALEIA 60
           MQSQTRTVQVKHVSNLATEREINEFFSFSG+IE IEIQCEQG+SRTAFVTFRDPKALEIA
Sbjct: 1   MQSQTRTVQVKHVSNLATEREINEFFSFSGEIEHIEIQCEQGESRTAFVTFRDPKALEIA 60

Query: 61  LLLSGATIVDQIVSISPVENHVPRREMQDSGSQSSSGKMYVNRAQEVVANVLAKGSAIGQ 120
           LLLSGATIVDQ VSISPVENHVPRREMQDSGSQ SSGKMYVNRAQEVVANVLAKGS IGQ
Sbjct: 61  LLLSGATIVDQTVSISPVENHVPRREMQDSGSQPSSGKMYVNRAQEVVANVLAKGSVIGQ 120

Query: 121 DAMNKAKAFDEKHQLTANASAKVLSFDRRVGLTEKLTVGISVVNEKVKSVDQNLHVSDKT 180
           DAMNKAKAFDEKH+LTA+ASAKVLSFDRRVGLTEKLTVGISVVNEKVKSVDQNLHVSDKT
Sbjct: 121 DAMNKAKAFDEKHRLTASASAKVLSFDRRVGLTEKLTVGISVVNEKVKSVDQNLHVSDKT 180

Query: 181 RAAIFAAERKLNDTGSAVKTSKYVTASAAWLNGAFGKIAKAGQAAGTKTREKFHLAMSNL 240
           RAAIFAAERKL+DTGSAVKTSKYVTASAAWLNGAFGK+AKAGQAAGTKTREKFHLAMSNL
Sbjct: 181 RAAIFAAERKLSDTGSAVKTSKYVTASAAWLNGAFGKVAKAGQAAGTKTREKFHLAMSNL 240

Query: 241 TSK 243
           TSK
Sbjct: 241 TSK 243

[Close]

BLAST of CsGy4G010650 vs. NCBI nr
Match: XP_008441995.1 (PREDICTED: binding partner of ACD11 1-like isoform X1 [Cucumis melo])

HSP 1 Score: 441 bits (1133), Expect = 1.21e-154
Identity = 239/268 (89.18%), Postives = 245/268 (91.42%), Query Frame = 0


Query: 1   MQSQTRTVQVKHVSNLATEREINEFFSFSGQIERIEIQCEQGDSRTAFVTFRDPKALEIA 60
           MQSQTRTVQVKHVSNLATEREINEFFSFSG+IE IEIQCEQG+SRTAFVTFRDPKALEIA
Sbjct: 1   MQSQTRTVQVKHVSNLATEREINEFFSFSGEIEHIEIQCEQGESRTAFVTFRDPKALEIA 60

Query: 61  LLLSGATIVDQIVSISPVENHVPRREMQ-------------------DSGSQSSSGKMYV 120
           LLLSGATIVDQ VSISPVENHVPRREMQ                   DSGSQ SSGKMYV
Sbjct: 61  LLLSGATIVDQTVSISPVENHVPRREMQVVDNAACLTPTENNFPNTEDSGSQPSSGKMYV 120

Query: 121 NRAQEVVANVLAKGSAIGQDAMNKAKAFDEKHQLTANASAKVLSFDRRVGLTEKLTVGIS 180
           NRAQEVVANVLAKGS IGQDAMNKAKAFDEKH+LTA+ASAKVLSFDRRVGLTEKLTVGIS
Sbjct: 121 NRAQEVVANVLAKGSVIGQDAMNKAKAFDEKHRLTASASAKVLSFDRRVGLTEKLTVGIS 180

Query: 181 VVNEKVKSVDQNLHVSDKTRAAIFAAERKLNDTGSAVKTSKYVTASAAWLNGAFGKIAKA 240
           VVNEKVKSVDQNLHVSDKTRAAIFAAERKL+DTGSAVKTSKYVTASAAWLNGAFGK+AKA
Sbjct: 181 VVNEKVKSVDQNLHVSDKTRAAIFAAERKLSDTGSAVKTSKYVTASAAWLNGAFGKVAKA 240

Query: 241 GQAAGTKTREKFHLAMSNLTSKESPVVA 249
           GQAAGTKTREKFHLAMSNLTSKESPVVA
Sbjct: 241 GQAAGTKTREKFHLAMSNLTSKESPVVA 268

[Close]

BLAST of CsGy4G010650 vs. ExPASy TrEMBL
Match: A0A0A0KYL6 (RRM domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G188980 PE=4 SV=1)

HSP 1 Score: 471 bits (1212), Expect = 2.89e-167
Identity = 251/251 (100.00%), Postives = 251/251 (100.00%), Query Frame = 0


Query: 1   MQSQTRTVQVKHVSNLATEREINEFFSFSGQIERIEIQCEQGDSRTAFVTFRDPKALEIA 60
           MQSQTRTVQVKHVSNLATEREINEFFSFSGQIERIEIQCEQGDSRTAFVTFRDPKALEIA
Sbjct: 1   MQSQTRTVQVKHVSNLATEREINEFFSFSGQIERIEIQCEQGDSRTAFVTFRDPKALEIA 60

Query: 61  LLLSGATIVDQIVSISPVENHVPRREMQDSGSQSSSGKMYVNRAQEVVANVLAKGSAIGQ 120
           LLLSGATIVDQIVSISPVENHVPRREMQDSGSQSSSGKMYVNRAQEVVANVLAKGSAIGQ
Sbjct: 61  LLLSGATIVDQIVSISPVENHVPRREMQDSGSQSSSGKMYVNRAQEVVANVLAKGSAIGQ 120

Query: 121 DAMNKAKAFDEKHQLTANASAKVLSFDRRVGLTEKLTVGISVVNEKVKSVDQNLHVSDKT 180
           DAMNKAKAFDEKHQLTANASAKVLSFDRRVGLTEKLTVGISVVNEKVKSVDQNLHVSDKT
Sbjct: 121 DAMNKAKAFDEKHQLTANASAKVLSFDRRVGLTEKLTVGISVVNEKVKSVDQNLHVSDKT 180

Query: 181 RAAIFAAERKLNDTGSAVKTSKYVTASAAWLNGAFGKIAKAGQAAGTKTREKFHLAMSNL 240
           RAAIFAAERKLNDTGSAVKTSKYVTASAAWLNGAFGKIAKAGQAAGTKTREKFHLAMSNL
Sbjct: 181 RAAIFAAERKLNDTGSAVKTSKYVTASAAWLNGAFGKIAKAGQAAGTKTREKFHLAMSNL 240

Query: 241 TSKESPVVASS 251
           TSKESPVVASS
Sbjct: 241 TSKESPVVASS 251

[Close]

BLAST of CsGy4G010650 vs. ExPASy TrEMBL
Match: A0A1S3B5F3 (binding partner of ACD11 1-like isoform X2 OS=Cucumis melo OX=3656 GN=LOC103485992 PE=4 SV=1)

HSP 1 Score: 452 bits (1163), Expect = 7.91e-160
Identity = 239/249 (95.98%), Postives = 245/249 (98.39%), Query Frame = 0


Query: 1   MQSQTRTVQVKHVSNLATEREINEFFSFSGQIERIEIQCEQGDSRTAFVTFRDPKALEIA 60
           MQSQTRTVQVKHVSNLATEREINEFFSFSG+IE IEIQCEQG+SRTAFVTFRDPKALEIA
Sbjct: 1   MQSQTRTVQVKHVSNLATEREINEFFSFSGEIEHIEIQCEQGESRTAFVTFRDPKALEIA 60

Query: 61  LLLSGATIVDQIVSISPVENHVPRREMQDSGSQSSSGKMYVNRAQEVVANVLAKGSAIGQ 120
           LLLSGATIVDQ VSISPVENHVPRREMQDSGSQ SSGKMYVNRAQEVVANVLAKGS IGQ
Sbjct: 61  LLLSGATIVDQTVSISPVENHVPRREMQDSGSQPSSGKMYVNRAQEVVANVLAKGSVIGQ 120

Query: 121 DAMNKAKAFDEKHQLTANASAKVLSFDRRVGLTEKLTVGISVVNEKVKSVDQNLHVSDKT 180
           DAMNKAKAFDEKH+LTA+ASAKVLSFDRRVGLTEKLTVGISVVNEKVKSVDQNLHVSDKT
Sbjct: 121 DAMNKAKAFDEKHRLTASASAKVLSFDRRVGLTEKLTVGISVVNEKVKSVDQNLHVSDKT 180

Query: 181 RAAIFAAERKLNDTGSAVKTSKYVTASAAWLNGAFGKIAKAGQAAGTKTREKFHLAMSNL 240
           RAAIFAAERKL+DTGSAVKTSKYVTASAAWLNGAFGK+AKAGQAAGTKTREKFHLAMSNL
Sbjct: 181 RAAIFAAERKLSDTGSAVKTSKYVTASAAWLNGAFGKVAKAGQAAGTKTREKFHLAMSNL 240

Query: 241 TSKESPVVA 249
           TSKESPVVA
Sbjct: 241 TSKESPVVA 249

[Close]

BLAST of CsGy4G010650 vs. ExPASy TrEMBL
Match: A0A5D3CB19 (Binding partner of ACD11 1-like isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold654G00140 PE=4 SV=1)

HSP 1 Score: 441 bits (1135), Expect = 1.31e-155
Identity = 233/243 (95.88%), Postives = 239/243 (98.35%), Query Frame = 0


Query: 1   MQSQTRTVQVKHVSNLATEREINEFFSFSGQIERIEIQCEQGDSRTAFVTFRDPKALEIA 60
           MQSQTRTVQVKHVSNLATEREINEFFSFSG+IE IEIQCEQG+SRTAFVTFRDPKALEIA
Sbjct: 1   MQSQTRTVQVKHVSNLATEREINEFFSFSGEIEHIEIQCEQGESRTAFVTFRDPKALEIA 60

Query: 61  LLLSGATIVDQIVSISPVENHVPRREMQDSGSQSSSGKMYVNRAQEVVANVLAKGSAIGQ 120
           LLLSGATIVDQ VSISPVENHVPRREMQDSGSQ SSGKMYVNRAQEVVANVLAKGS IGQ
Sbjct: 61  LLLSGATIVDQTVSISPVENHVPRREMQDSGSQPSSGKMYVNRAQEVVANVLAKGSVIGQ 120

Query: 121 DAMNKAKAFDEKHQLTANASAKVLSFDRRVGLTEKLTVGISVVNEKVKSVDQNLHVSDKT 180
           DAMNKAKAFDEKH+LTA+ASAKVLSFDRRVGLTEKLTVGISVVNEKVKSVDQNLHVSDKT
Sbjct: 121 DAMNKAKAFDEKHRLTASASAKVLSFDRRVGLTEKLTVGISVVNEKVKSVDQNLHVSDKT 180

Query: 181 RAAIFAAERKLNDTGSAVKTSKYVTASAAWLNGAFGKIAKAGQAAGTKTREKFHLAMSNL 240
           RAAIFAAERKL+DTGSAVKTSKYVTASAAWLNGAFGK+AKAGQAAGTKTREKFHLAMSNL
Sbjct: 181 RAAIFAAERKLSDTGSAVKTSKYVTASAAWLNGAFGKVAKAGQAAGTKTREKFHLAMSNL 240

Query: 241 TSK 243
           TSK
Sbjct: 241 TSK 243

[Close]

BLAST of CsGy4G010650 vs. ExPASy TrEMBL
Match: A0A1S3B5B6 (binding partner of ACD11 1-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC103485992 PE=4 SV=1)

HSP 1 Score: 441 bits (1133), Expect = 5.86e-155
Identity = 239/268 (89.18%), Postives = 245/268 (91.42%), Query Frame = 0


Query: 1   MQSQTRTVQVKHVSNLATEREINEFFSFSGQIERIEIQCEQGDSRTAFVTFRDPKALEIA 60
           MQSQTRTVQVKHVSNLATEREINEFFSFSG+IE IEIQCEQG+SRTAFVTFRDPKALEIA
Sbjct: 1   MQSQTRTVQVKHVSNLATEREINEFFSFSGEIEHIEIQCEQGESRTAFVTFRDPKALEIA 60

Query: 61  LLLSGATIVDQIVSISPVENHVPRREMQ-------------------DSGSQSSSGKMYV 120
           LLLSGATIVDQ VSISPVENHVPRREMQ                   DSGSQ SSGKMYV
Sbjct: 61  LLLSGATIVDQTVSISPVENHVPRREMQVVDNAACLTPTENNFPNTEDSGSQPSSGKMYV 120

Query: 121 NRAQEVVANVLAKGSAIGQDAMNKAKAFDEKHQLTANASAKVLSFDRRVGLTEKLTVGIS 180
           NRAQEVVANVLAKGS IGQDAMNKAKAFDEKH+LTA+ASAKVLSFDRRVGLTEKLTVGIS
Sbjct: 121 NRAQEVVANVLAKGSVIGQDAMNKAKAFDEKHRLTASASAKVLSFDRRVGLTEKLTVGIS 180

Query: 181 VVNEKVKSVDQNLHVSDKTRAAIFAAERKLNDTGSAVKTSKYVTASAAWLNGAFGKIAKA 240
           VVNEKVKSVDQNLHVSDKTRAAIFAAERKL+DTGSAVKTSKYVTASAAWLNGAFGK+AKA
Sbjct: 181 VVNEKVKSVDQNLHVSDKTRAAIFAAERKLSDTGSAVKTSKYVTASAAWLNGAFGKVAKA 240

Query: 241 GQAAGTKTREKFHLAMSNLTSKESPVVA 249
           GQAAGTKTREKFHLAMSNLTSKESPVVA
Sbjct: 241 GQAAGTKTREKFHLAMSNLTSKESPVVA 268

[Close]

BLAST of CsGy4G010650 vs. ExPASy TrEMBL
Match: A0A5A7V2T9 (Binding partner of ACD11 1-like isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold39G00030 PE=4 SV=1)

HSP 1 Score: 424 bits (1090), Expect = 3.20e-148
Identity = 233/277 (84.12%), Postives = 239/277 (86.28%), Query Frame = 0


Query: 1   MQSQTRTVQVKHVSNLATEREINEFFSFSGQIERIEIQCEQGDSRTAFVTFRDPKALEIA 60
           MQSQTRTVQVKHVSNLATEREINEFFSFSG+IE IEIQCEQG+SRTAFVTFRDPKALEIA
Sbjct: 1   MQSQTRTVQVKHVSNLATEREINEFFSFSGEIEHIEIQCEQGESRTAFVTFRDPKALEIA 60

Query: 61  LLLSGATIVDQIVSISPVENHVPRREMQ-------------------------------- 120
           LLLSGATIVDQ VSISPVENHVPRREMQ                                
Sbjct: 61  LLLSGATIVDQTVSISPVENHVPRREMQVLFLYLNIFQGLPIRVVDNAACLTPTENNFPN 120

Query: 121 --DSGSQSSSGKMYVNRAQEVVANVLAKGSAIGQDAMNKAKAFDEKHQLTANASAKVLSF 180
             DSGSQ SSGKMYVNRAQEVVANVLAKGS IGQDAMNKAKAFDEKH+LTA+ASAKVLSF
Sbjct: 121 TEDSGSQPSSGKMYVNRAQEVVANVLAKGSVIGQDAMNKAKAFDEKHRLTASASAKVLSF 180

Query: 181 DRRVGLTEKLTVGISVVNEKVKSVDQNLHVSDKTRAAIFAAERKLNDTGSAVKTSKYVTA 240
           DRRVGLTEKLTVGISVVNEKVKSVDQNLHVSDKTRAAIFAAERKL+DTGSAVKTSKYVTA
Sbjct: 181 DRRVGLTEKLTVGISVVNEKVKSVDQNLHVSDKTRAAIFAAERKLSDTGSAVKTSKYVTA 240

Query: 241 SAAWLNGAFGKIAKAGQAAGTKTREKFHLAMSNLTSK 243
           SAAWLNGAFGK+AKAGQAAGTKTREKFHLAMSNLTSK
Sbjct: 241 SAAWLNGAFGKVAKAGQAAGTKTREKFHLAMSNLTSK 277

[Close]

BLAST of CsGy4G010650 vs. TAIR 10
Match: AT5G32450.1 (RNA binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 330.5 bits (846), Expect = 1.2e-90
Identity = 182/262 (69.47%), Postives = 216/262 (82.44%), Query Frame = 0


Query: 5   TRTVQVKHVSNLATEREINEFFSFSGQIERIEIQCEQGDSRTAFVTFRDPKALEIALLLS 64
           TR+VQV +VS+LATEREI+EFFSFSG IE IEIQ E G SR AFVTF DPKALEIALLLS
Sbjct: 4   TRSVQVNNVSDLATEREIHEFFSFSGDIEHIEIQKEFGQSRIAFVTFTDPKALEIALLLS 63

Query: 65  GATIVDQIVSISPVENHVPRRE--------------MQDSGSQS-----SSGKMYVNRAQ 124
           GATIVDQIV+I+  EN+V RRE              +Q+S +Q+      + + YV++AQ
Sbjct: 64  GATIVDQIVTITRAENYVQRRETQEVRMLDNAMPLGLQESTTQTKTNMDGNSRAYVSKAQ 123

Query: 125 EVVANVLAKGSAIGQDAMNKAKAFDEKHQLTANASAKVLSFDRRVGLTEKLTVGISVVNE 184
           +VVA VLAKGSA+GQDA+NKAKAFDEKHQL ANASAKV SFD+RVGLTEKL+VGIS VNE
Sbjct: 124 DVVATVLAKGSALGQDAVNKAKAFDEKHQLRANASAKVSSFDKRVGLTEKLSVGISAVNE 183

Query: 185 KVKSVDQNLHVSDKTRAAIFAAERKLNDTGSAVKTSKYVTASAAWLNGAFGKIAKAGQAA 244
           KVKSVDQ L VSDKT AAIFAAERKLNDTGSAVK+S+YVTA AAW +GAF K+A+ GQ A
Sbjct: 184 KVKSVDQKLQVSDKTMAAIFAAERKLNDTGSAVKSSRYVTAGAAWFSGAFSKVARVGQVA 243

Query: 245 GTKTREKFHLAMSNLTSKESPV 248
           G+KT+EKF+LA+SN++SK++P+
Sbjct: 244 GSKTKEKFNLAVSNMSSKDTPI 265

[Close]

BLAST of CsGy4G010650 vs. TAIR 10
Match: AT4G17720.1 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 201.4 bits (511), Expect = 8.3e-52
Identity = 118/262 (45.04%), Postives = 169/262 (64.50%), Query Frame = 0


Query: 7   TVQVKHVSNLATEREINEFFSFSGQIERIEIQCEQGDSRTAFVTFRDPKALEIALLLSGA 66
           TV+V +VS  AT+R++ EFFSFSG I  +E Q E   ++ A+VTF+D +  E A+LLSGA
Sbjct: 5   TVKVSNVSLGATDRDLKEFFSFSGDILYLETQSETERTKLAYVTFKDLQGAETAVLLSGA 64

Query: 67  TIVDQ--IVSISPVENHVPRR----EMQDSGSQSSSGKMYVNRAQEVVANVLAKGSAIGQ 126
           TIVD   IVS++P     P      E +DS     +G   + +A++VV+++LAKG  +G+
Sbjct: 65  TIVDSSVIVSMAPDYQLSPEALASLEPKDSNKSPKAGDSVLRKAEDVVSSMLAKGFILGK 124

Query: 127 DAMNKAKAFDEKHQLTANASAKVLSFDRRVGLTEKLTVGISVVNEKVKSVDQNLHVSDKT 186
           DA+ KAK+ DEKHQLT+ ASAKV SFD+++G T+K+  G  VV EKV+ VDQ   VS+KT
Sbjct: 125 DAIAKAKSVDEKHQLTSTASAKVASFDKKIGFTDKINTGTVVVGEKVREVDQKYQVSEKT 184

Query: 187 RAAIFAAERKLNDTGSAVKTSKYVTASAAWLNGAFGKIAKAGQAAGTKTREKFHLA---- 246
           ++AI AAE+ +++ GSA+  ++YV   A W+ GAF K+AKA +  G K +EK  +A    
Sbjct: 185 KSAIAAAEQTVSNAGSAIMKNRYVLTGATWVTGAFNKVAKAAEEVGQKAKEKVGMAEEED 244

Query: 247 -------MSNLTSKESPVVASS 252
                   + +   ESP  ASS
Sbjct: 245 KRKVVDEFARVHLSESPKAASS 266

[Close]

BLAST of CsGy4G010650 vs. TAIR 10
Match: AT5G16840.1 (binding partner of acd11 1 )

HSP 1 Score: 198.0 bits (502), Expect = 9.2e-51
Identity = 109/236 (46.19%), Postives = 163/236 (69.07%), Query Frame = 0


Query: 1   MQSQTRTVQVKHVSNLATEREINEFFSFSGQIERIEIQCEQGDSRTAFVTFRDPKALEIA 60
           M SQ R+V+V ++S+ ATE +I EFFSFSG++E I+I   Q +  +A+VTF++ +  E A
Sbjct: 1   MASQVRSVKVGNLSSGATEHDIKEFFSFSGEVESIDI---QSNEHSAYVTFKETQGAETA 60

Query: 61  LLLSGATIVDQIVSISPVENH----VPRREMQDSGSQSSSGKMYVNRAQEVVANVLAKGS 120
           +LLSGA+I DQ V I    N+     P  E Q SG++S      V +A++VV+++LAKG 
Sbjct: 61  VLLSGASIADQSVIIELAPNYSPPAAPHAETQSSGAES-----VVQKAEDVVSSMLAKGF 120

Query: 121 AIGQDAMNKAKAFDEKHQLTANASAKVLSFDRRVGLTEKLTVGISVVNEKVKSVDQNLHV 180
            +G+DA+ KAKAFDEKH  T+ A+A V S D+++GL++KLT G S+VNEK+K+VDQN  V
Sbjct: 121 ILGKDAVGKAKAFDEKHGFTSTATAGVASLDQKIGLSQKLTAGTSLVNEKIKAVDQNFQV 180

Query: 181 SDKTRAAIFAAERKLNDTGSAVKTSKYVTASAAWLNGAFGKIAKAGQAAGTKTREK 233
           +++T++   AAE+ ++  GSAV  ++YV    +W  GAF ++A+A    G KT+EK
Sbjct: 181 TERTKSVYAAAEQTVSSAGSAVMKNRYVLTGVSWAAGAFNRVAQAAGEVGQKTKEK 228

[Close]

BLAST of CsGy4G010650 vs. TAIR 10
Match: AT5G16840.2 (binding partner of acd11 1 )

HSP 1 Score: 198.0 bits (502), Expect = 9.2e-51
Identity = 109/236 (46.19%), Postives = 163/236 (69.07%), Query Frame = 0


Query: 1   MQSQTRTVQVKHVSNLATEREINEFFSFSGQIERIEIQCEQGDSRTAFVTFRDPKALEIA 60
           M SQ R+V+V ++S+ ATE +I EFFSFSG++E I+IQ    +  +A+VTF++ +  E A
Sbjct: 1   MASQVRSVKVGNLSSGATEHDIKEFFSFSGEVESIDIQ--SSNEHSAYVTFKETQGAETA 60

Query: 61  LLLSGATIVDQIVSISPVENH----VPRREMQDSGSQSSSGKMYVNRAQEVVANVLAKGS 120
           +LLSGA+I DQ V I    N+     P  E Q SG++S      V +A++VV+++LAKG 
Sbjct: 61  VLLSGASIADQSVIIELAPNYSPPAAPHAETQSSGAES-----VVQKAEDVVSSMLAKGF 120

Query: 121 AIGQDAMNKAKAFDEKHQLTANASAKVLSFDRRVGLTEKLTVGISVVNEKVKSVDQNLHV 180
            +G+DA+ KAKAFDEKH  T+ A+A V S D+++GL++KLT G S+VNEK+K+VDQN  V
Sbjct: 121 ILGKDAVGKAKAFDEKHGFTSTATAGVASLDQKIGLSQKLTAGTSLVNEKIKAVDQNFQV 180

Query: 181 SDKTRAAIFAAERKLNDTGSAVKTSKYVTASAAWLNGAFGKIAKAGQAAGTKTREK 233
           +++T++   AAE+ ++  GSAV  ++YV    +W  GAF ++A+A    G KT+EK
Sbjct: 181 TERTKSVYAAAEQTVSSAGSAVMKNRYVLTGVSWAAGAFNRVAQAAGEVGQKTKEK 229

[Close]

BLAST of CsGy4G010650 vs. TAIR 10
Match: AT5G46870.1 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 197.2 bits (500), Expect = 1.6e-50
Identity = 109/251 (43.43%), Postives = 166/251 (66.14%), Query Frame = 0


Query: 7   TVQVKHVSNLATEREINEFFSFSGQIERIEIQCEQGDSRTAFVTFRDPKALEIALLLSGA 66
           TV+V +VS  ATER++ EFFSFSG I  +E Q E   S+ A+VTF+D +  E A+LL+G+
Sbjct: 5   TVKVSNVSLEATERDLKEFFSFSGDIAYLETQSENDGSKLAYVTFKDLQGAETAVLLTGS 64

Query: 67  TIVDQIVSIS-------PVENHVPRREMQDSGSQSSSGKMYVN---RAQEVVANVLAKGS 126
           TIVD  V+++       P +       +++S   SS  +  V+   +A++VV+ +++KG 
Sbjct: 65  TIVDSSVTVTMSPDYQLPPDALASIESLKESNKSSSPTREDVSVFRKAEDVVSGMISKGF 124

Query: 127 AIGQDAMNKAKAFDEKHQLTANASAKVLSFDRRVGLTEKLTVGISVVNEKVKSVDQNLHV 186
            +G+DA+ KAK+ DEKHQLT+ ASA+V SFD+R+G TEK+  G +VV+EKVK VDQ   V
Sbjct: 125 VLGKDAIAKAKSLDEKHQLTSTASARVTSFDKRIGFTEKINTGTTVVSEKVKEVDQKFQV 184

Query: 187 SDKTRAAIFAAERKLNDTGSAVKTSKYVTASAAWLNGAFGKIAKAGQAAGTKTREKFHLA 246
           ++KT++AI AAE+ +++ GSA+  ++YV   A W+ GAF +++KA +  G K +EK  LA
Sbjct: 185 TEKTKSAIAAAEQTVSNAGSAIMKNRYVLTGATWVTGAFNRVSKAAEEVGQKAKEKVGLA 244

Query: 247 MSNLTSKESPV 248
                 K+  V
Sbjct: 245 EEEEEEKKKVV 255

The following BLAST results are available for this feature:

BLAST of CsGy4G010650 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LFD5	1.3e-49	46.19	Binding partner of ACD11 1 OS=Arabidopsis thaliana OX=3702 GN=BPA1 PE=1 SV=1	[more]
P87216	9.4e-08	23.01	Protein vip1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN...	[more]

BLAST of CsGy4G010650 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004149115.1	5.97e-167	100.00	binding partner of ACD11 1 isoform X1 [Cucumis sativus]	[more]
XP_011653468.1	9.09e-162	99.59	binding partner of ACD11 1 isoform X2 [Cucumis sativus] >KAE8649369.1 hypothetic...	[more]
XP_008441996.1	1.63e-159	95.98	PREDICTED: binding partner of ACD11 1-like isoform X2 [Cucumis melo]	[more]
TYK08404.1	2.71e-155	95.88	binding partner of ACD11 1-like isoform X2 [Cucumis melo var. makuwa]	[more]
XP_008441995.1	1.21e-154	89.18	PREDICTED: binding partner of ACD11 1-like isoform X1 [Cucumis melo]	[more]

BLAST of CsGy4G010650 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KYL6	2.89e-167	100.00	RRM domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G188980 PE=4 SV...	[more]
A0A1S3B5F3	7.91e-160	95.98	binding partner of ACD11 1-like isoform X2 OS=Cucumis melo OX=3656 GN=LOC1034859...	[more]
A0A5D3CB19	1.31e-155	95.88	Binding partner of ACD11 1-like isoform X2 OS=Cucumis melo var. makuwa OX=119469...	[more]
A0A1S3B5B6	5.86e-155	89.18	binding partner of ACD11 1-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC1034859...	[more]
A0A5A7V2T9	3.20e-148	84.12	Binding partner of ACD11 1-like isoform X1 OS=Cucumis melo var. makuwa OX=119469...	[more]

BLAST of CsGy4G010650 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G32450.1	1.2e-90	69.47	RNA binding (RRM/RBD/RNP motifs) family protein	[more]
AT4G17720.1	8.3e-52	45.04	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]
AT5G16840.1	9.2e-51	46.19	binding partner of acd11 1	[more]
AT5G16840.2	9.2e-51	46.19	binding partner of acd11 1	[more]
AT5G46870.1	1.6e-50	43.43	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (Gy14) v2.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000504	RNA recognition motif domain	SMART	SM00360	rrm1_1	coord: 7..76 e-value: 1.9E-5 score: 34.1
IPR000504	RNA recognition motif domain	PFAM	PF00076	RRM_1	coord: 10..68 e-value: 8.2E-6 score: 25.6
IPR000504	RNA recognition motif domain	PROSITE	PS50102	RRM	coord: 6..80 score: 9.865582
IPR012677	Nucleotide-binding alpha-beta plait domain superfamily	GENE3D	3.30.70.330		coord: 1..108 e-value: 1.8E-9 score: 39.7
None	No IPR available	PANTHER	PTHR32343	SERINE/ARGININE-RICH SPLICING FACTOR	coord: 92..246 coord: 3..85
None	No IPR available	PANTHER	PTHR32343:SF61	RNA BINDING (RRM/RBD/RNP MOTIFS) FAMILY PROTEIN-RELATED	coord: 92..246 coord: 3..85
IPR035979	RNA-binding domain superfamily	SUPERFAMILY	54928	RNA-binding domain, RBD	coord: 3..98

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsGy4G010650.1	CsGy4G010650.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0003723	RNA binding
molecular_function	GO:0003676	nucleic acid binding