CsGy4G010050 (gene) Cucumber (Gy14) v2.1

Overview
NameCsGy4G010050
Typegene
OrganismCucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
DescriptionUnknown protein
LocationGy14Chr4: 8533507 .. 8536567 (+)
RNA-Seq ExpressionCsGy4G010050
SyntenyCsGy4G010050
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGTGTTCAATTATTTATAGCATCATGGACAAAGCTCTTAAGTCTTGAGCTTCCTTCGCTAATTCCCAGCAACAGTAATGGCTTCTATCAATAATATCATTTTGATAATCTTCAAACTGCTTTTCTTCACACTGCTTCTCATCACTACCTCTTCAGCTTTCCAACCCCAACTTCATGAACCTCACTTTCGTAAGATCTCTCCTTCCCATTATTGATCTTCTTTTATTATTTTTCCTTGGTGGGTGTTACGGTTAATATTTCTATAAATTTTAGAAACATATTCCACATATCTAGTAGTTTAGTTTGCATGAAAATTGTTATTTTTCTTTAACCAATATTTTGTTAAGAATTAAGTTTGAGGTTATAACAAATTAACTAACATTATGAAACTTAATTTGTTGTAAAAAAAAAGATTAATTTTGAGTTATAATATGGTAATTGTTTTGAATTAAAGGTAAGAAGATGAGGATGGAGTATAGAAGTGTTAGAAAGGCTGCGTTGGGAGGAAAGCCAGCAGTTTATGATTTCCCTTGGAAAGGTGGTTATAATCCTCCTCACAACAACCGTTGATGTCTCTATATTTTTGGATCCACAGATTATCAACCTTACAACCCTACAAATATTAATTTATGATCTTTTTGTTGTTGTTTTGTTTCTATTATGTGTTCGTCTCTGTTGGTCACAATACCCAAATATCTTCTCTTTTATGTGTTCTTCTCTTTATTCTTAATAATTGTTTTCTTTTGCTCTCTCTCGATGTTGTTCTCTTTCTTTGTTGTTGTTTGTTTTCTATAAAACATTTTTAATCATAATAAACGATATTCTTTATAAATGATAGGTTGACTAATAAGTAGGGTTTAATTGAGATATTCAAATGTGATACTATAACAATTTTGGTCTCTACCCACACAAAGAAATGTGATCAGATATTAAGAAAAACATGGGTAGAGCTTTTGTTGACGTTATTTTTTGTGTGGTCGGAATCCCGTCGTTTTTTCATTTGCCCAGGTTGTTGACATTACGTTGCCGTCCATGTCAATTATATTAAACTTGTGGGTAGAAAAGACATTTCTGCCAATGAAACGAATGTCGATGAAAAAATATTTTTGCCTATGATCATCGTCATGTCGACAAAAATTAATAGAATTTCTATCCGCTTTTGTTTTATGGATATAAATTCTTTCTATCTACAAAATTATAAGCTTTGATATTAATTTTATGTGTTCAACCATGGATTACTCAAAAAACCTATTATTTTGCTTACACTTGGACAAATAATAGGAAAATGTGTATTACGGAGGATTTAGTGACAATGCCAGAAGTAGAGATATAGTGAGCATGTCACATTCGATGACTATGACCCGCTGTGTAAATGGACTTCGATATGACTTTAACATATACACTTTAATCGCACAATGCTAAGACTAACCCTCTCTCTCTCTCCTCATTTGATTCCATATCAATCACCTTTTATATGGTCTCAAAGCAAATATCTTCTACTCCAAATAATTATCCTTCAACAATTAATTTATTTTTATCCGTTTCCCAAATCAAATATCCAACTGCTCACAAAAAAATTATATTGGTGACAATATAATTATTTTTACTTCCCACAAATTAATTATATATATATACAAATACATATAATTAACATAACTTTTAAAATCCACAACTTTAATTAAAACCACACAACATACAATTTAATCTAATTATCAACCAAACACAACAATTCAAATCCTCTAATTAATTAAATATTCATCCAACAATATTTAGTTAATTCCAATTTTCACAAAATAAAATCATCCTCAATCATTTTTTTCTCAAAATAACACCCAATAAAGTTGTAATGCCTCAAGTTTAAGAGATGAACATGAATGAATCTGATATCACATCTGAATAAGAGGGATCCTAAAGACATGAAATTAATGTTAAGAAAAACTTAAAACAAATAAAAGTTACTACTTGTACCAATATGGTGCATCTTTCTTTTTTGTGGCTCAATCATAGGAACTCCAAAGTTTACGTCGTGTGCGGTCCAGATCCACGTTGCCGGCCGCCATACCTGTCTCCGTTCGCGAAGCAAAGCAGCGCGACCCTCTGCCTTCCAGCCGCCGCGTGACCCTTTGCCTTCCAATCGTGTGTTCCAAGTCGGCCCATACTCCAATCTTCCTTGCAATCTCTTTTGCTTTAGTTTTGTGCGCCGCTGCCTCTACATTGTTGTAAGTTTGTTTTAGTAAGGACGAAATTGATGGGTTATGAGGTTCTGCATTGTAAATACATTAAGATGTGATGTTTGTTTTTTGGTTGAATTGATGTTATTCTAGAAGGTGACATTGGAGAGTTGGTGTTAAGGTTCTTGGGTTTCGCAGTAAGCTTCGTAGGAGTTCAATTCTTTACTCCTTGGGTAAGTTGTCAAATTCATGTTTGGGGTGGGTTGGATGGATTTAGTTAATTGGAAATTTTCTAGCTCTCTGTTGTTATGACTAGATTACATTGTTGATTTTATGTTTGTTTATGTTTAGGATTTGATTGTTGGAATTAGTTCGACCAAGGATTTTTGCATAAAAATTGAGGTAAGGGTTTCTCTACTACTAGACTCAACCACCGTTATATATATATGTATTGATGTAGACTGGTGTTGAATGTGTATGTGAATGATTGGAATTGTGTATATACATAAATTGACGTAGACTTGATGTTGAATGCATATGAAGATTGTCTGGGATTAAATATGTAGCTGTGGATGTAGGCAGGACGATCTTAGTAGATTGTGTTGTATAAAATTTTGGATATGAACTTGTGACTTTGATTCGATTGGGTGTAAGTTGTACTAAAGTGTGACTTGTACTGGTGAACTGAGGGGCGTTATGACTTTGTGGTTTGATTGACTGATGTATTAAAATGTTATTGATTGATTGATGTATTAAAATGTTACCAACGGTCTTTGGACTAAAGTGAGATAGATTGACTGTTAGGACGTTAAGTGAGAGAATTACATATGTTGAAGTAGTTGAACGGTGTTATAAATGATTGTTAAGAGGTTTAGACTGGACTGAGGGG

mRNA sequence

ATGGTGTTCAATTATTTATAGCATCATGGACAAAGCTCTTAAGTCTTGAGCTTCCTTCGCTAATTCCCAGCAACAGTAATGGCTTCTATCAATAATATCATTTTGATAATCTTCAAACTGCTTTTCTTCACACTGCTTCTCATCACTACCTCTTCAGCTTTCCAACCCCAACTTCATGAACCTCACTTTCGTAAGAAGATGAGGATGGAGTATAGAAGTGTTAGAAAGGCTGCGTTGGGAGGAAAGCCAGCAGTTTATGATTTCCCTTGGAAAGGTGGTTATAATCCTCCTCACAACAACCGTTGATGTCTCTATATTTTTGGATCCACAGATTATCAACCTTACAACCCTACAAATATTAATTTATGATCTTTTTGTTGTTGTTTTGTTTCTATTATGTGTTCGTCTCTGTTGGTCACAATACCCAAATATCTTCTCTTTTATGTGTTCTTCTCTTTATTCTTAATAATTGTTTTCTTTTGCTCTCTCTCGATGTTGTTCTCTTTCTTTGTTGTTGTTTGTTTTCTATAAAACATTTTTAATCATAATAAACGATATTCTTTATAAATGATAGGTTGACTAATAAGTAGGGTTTAATTGAGATATTCAAATGTGATACTATAACAATTTTGGTCTCTACCCACACAAAGAAATGTGATCAGATATTAAGAAAAACATGGGTAGAGCTTTTGTTGACGTTATTTTTTGTGTGGTCGGAATCCCGTCGTTTTTTCATTTGCCCAGGTTGTTGACATTACGTTGCCGTCCATGTCAATTATATTAAACTTGTGGGTAGAAAAGACATTTCTGCCAATGAAACGAATGTCGATGAAAAAATATTTTTGCCTATGATCATCGTCATGTCGACAAAAATTAATAGAATTTCTATCCGCTTTTGTTTTATGGATATAAATTCTTTCTATCTACAAAATTATAAGCTTTGATATTAATTTTATGTGTTCAACCATGGATTACTCAAAAAACCTATTATTTTGCTTACACTTGGACAAATAATAGGAAAATGTGTATTACGGAGGATTTAGTGACAATGCCAGAAGTAGAGATATAGTGAGCATGTCACATTCGATGACTATGACCCGCTGTGTAAATGGACTTCGATATGACTTTAACATATACACTTTAATCGCACAATGCTAAGACTAACCCTCTCTCTCTCTCCTCATTTGATTCCATATCAATCACCTTTTATATGGTCTCAAAGCAAATATCTTCTACTCCAAATAATTATCCTTCAACAATTAATTTATTTTTATCCGTTTCCCAAATCAAATATCCAACTGCTCACAAAAAAATTATATTGGTGACAATATAATTATTTTTACTTCCCACAAATTAATTATATATATATACAAATACATATAATTAACATAACTTTTAAAATCCACAACTTTAATTAAAACCACACAACATACAATTTAATCTAATTATCAACCAAACACAACAATTCAAATCCTCTAATTAATTAAATATTCATCCAACAATATTTAGTTAATTCCAATTTTCACAAAATAAAATCATCCTCAATCATTTTTTTCTCAAAATAACACCCAATAAAGTTGTAATGCCTCAAGTTTAAGAGATGAACATGAATGAATCTGATATCACATCTGAATAAGAGGGATCCTAAAGACATGAAATTAATGTTAAGAAAAACTTAAAACAAATAAAAGTTACTACTTGTACCAATATGGTGCATCTTTCTTTTTTGTGGCTCAATCATAGGAACTCCAAAGTTTACGTCGTGTGCGGTCCAGATCCACGTTGCCGGCCGCCATACCTGTCTCCGTTCGCGAAGCAAAGCAGCGCGACCCTCTGCCTTCCAGCCGCCGCGTGACCCTTTGCCTTCCAATCGTGTGTTCCAAGTCGGCCCATACTCCAATCTTCCTTGCAATCTCTTTTGCTTTAGTTTTGTGCGCCGCTGCCTCTACATTGTTGTAAGTTTGTTTTAGTAAGGACGAAATTGATGGGTTATGAGGTTCTGCATTGTAAATACATTAAGATGTGATGTTTGTTTTTTGGTTGAATTGATGTTATTCTAGAAGGTGACATTGGAGAGTTGGTGTTAAGGTTCTTGGGTTTCGCAGTAAGCTTCGTAGGAGTTCAATTCTTTACTCCTTGGGTAAGTTGTCAAATTCATGTTTGGGGTGGGTTGGATGGATTTAGTTAATTGGAAATTTTCTAGCTCTCTGTTGTTATGACTAGATTACATTGTTGATTTTATGTTTGTTTATGTTTAGGATTTGATTGTTGGAATTAGTTCGACCAAGGATTTTTGCATAAAAATTGAGGTAAGGGTTTCTCTACTACTAGACTCAACCACCGTTATATATATATGTATTGATGTAGACTGGTGTTGAATGTGTATGTGAATGATTGGAATTGTGTATATACATAAATTGACGTAGACTTGATGTTGAATGCATATGAAGATTGTCTGGGATTAAATATGTAGCTGTGGATGTAGGCAGGACGATCTTAGTAGATTGTGTTGTATAAAATTTTGGATATGAACTTGTGACTTTGATTCGATTGGGTGTAAGTTGTACTAAAGTGTGACTTGTACTGGTGAACTGAGGGGCGTTATGACTTTGTGGTTTGATTGACTGATGTATTAAAATGTTATTGATTGATTGATGTATTAAAATGTTACCAACGGTCTTTGGACTAAAGTGAGATAGATTGACTGTTAGGACGTTAAGTGAGAGAATTACATATGTTGAAGTAGTTGAACGGTGTTATAAATGATTGTTAAGAGGTTTAGACTGGACTGAGGGG

Coding sequence (CDS)

ATGGCTTCTATCAATAATATCATTTTGATAATCTTCAAACTGCTTTTCTTCACACTGCTTCTCATCACTACCTCTTCAGCTTTCCAACCCCAACTTCATGAACCTCACTTTCGTAAGAAGATGAGGATGGAGTATAGAAGTGTTAGAAAGGCTGCGTTGGGAGGAAAGCCAGCAGTTTATGATTTCCCTTGGAAAGGTGGTTATAATCCTCCTCACAACAACCGTTGA

Protein sequence

MASINNIILIIFKLLFFTLLLITTSSAFQPQLHEPHFRKKMRMEYRSVRKAALGGKPAVYDFPWKGGYNPPHNNR*
Homology
[Close]
BLAST of CsGy4G010050 vs. NCBI nr
Match: KGN53822.1 (hypothetical protein Csa_015192 [Cucumis sativus])

HSP 1 Score: 154 bits (388), Expect = 5.08e-47
Identity = 75/75 (100.00%), Postives = 75/75 (100.00%), Query Frame = 0 

Query: 1  MASINNIILIIFKLLFFTLLLITTSSAFQPQLHEPHFRKKMRMEYRSVRKAALGGKPAVY 60
          MASINNIILIIFKLLFFTLLLITTSSAFQPQLHEPHFRKKMRMEYRSVRKAALGGKPAVY
Sbjct: 1  MASINNIILIIFKLLFFTLLLITTSSAFQPQLHEPHFRKKMRMEYRSVRKAALGGKPAVY 60

Query: 61 DFPWKGGYNPPHNNR 75
          DFPWKGGYNPPHNNR
Sbjct: 61 DFPWKGGYNPPHNNR 75

[Close]
BLAST of CsGy4G010050 vs. NCBI nr
Match: TYK18975.1 (hypothetical protein E5676_scaffold418G00680 [Cucumis melo var. makuwa])

HSP 1 Score: 132 bits (333), Expect = 1.22e-38
Identity = 68/75 (90.67%), Postives = 69/75 (92.00%), Query Frame = 0 

Query: 1  MASINNIILIIFKLLFFTLLLITTSSAFQPQLHEPHFRKKMRMEYRSVRKAALGGKPAVY 60
          MASIN II IIFKLLFFTLLLITTS+AFQPQLHEP FRKKMRMEYRSVRK ALG KPAVY
Sbjct: 1  MASIN-IIWIIFKLLFFTLLLITTSTAFQPQLHEPRFRKKMRMEYRSVRKGALGAKPAVY 60

Query: 61 DFPWKGGYNPPHNNR 75
          DFPWKGGYNPP NNR
Sbjct: 61 DFPWKGGYNPPDNNR 74

[Close]
BLAST of CsGy4G010050 vs. NCBI nr
Match: XP_022141390.1 (uncharacterized protein LOC111011803 [Momordica charantia])

HSP 1 Score: 74.7 bits (182), Expect = 3.75e-15
Identity = 38/65 (58.46%), Postives = 45/65 (69.23%), Query Frame = 0 

Query: 11  IFKLLFFTLLLITTS-SAFQPQLHEPHFRKKMRMEYRSVRKAALGGKPAVYDFPWKGGYN 70
           + KL FF LLLI +  SA  P +H+    +K+ MEYRSV KA L  K A YDFPWKGGYN
Sbjct: 50  VLKLFFFALLLIASRVSASTPSIHKRPRIRKLGMEYRSVGKAVLRAKAASYDFPWKGGYN 109

Query: 71  PPHNN 74
           PP+NN
Sbjct: 110 PPNNN 114

[Close]
BLAST of CsGy4G010050 vs. NCBI nr
Match: KAG6602002.1 (hypothetical protein SDJN03_07235, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 67.8 bits (164), Expect = 7.09e-13
Identity = 34/59 (57.63%), Postives = 42/59 (71.19%), Query Frame = 0 

Query: 17 FTLLLITTSSAFQPQLHEPHFRKKMRMEYRSVRKAALGGKPAVYDFPWKGGYNPPHNNR 75
          FT+     S++FQ    +PH RK + MEY +V KAAL  KPAVYDFPWKGGY+PP N+R
Sbjct: 21 FTVSAADISASFQ----KPHIRK-LSMEYTTVEKAALRAKPAVYDFPWKGGYHPPANDR 74

[Close]
BLAST of CsGy4G010050 vs. NCBI nr
Match: KAE8650426.1 (hypothetical protein Csa_009889 [Cucumis sativus])

HSP 1 Score: 46.6 bits (109), Expect = 2.09e-04
Identity = 30/71 (42.25%), Postives = 39/71 (54.93%), Query Frame = 0 

Query: 10 IIFKLLFFTLLLI-----TTSSAFQPQLHEPHFRKKMRMEYRSVRKAALGG---KPAVYD 69
          ++ KLLFF+LLLI     TT++  QP  H+P  RK    +  +  KA +     KP   D
Sbjct: 13 LLLKLLFFSLLLIFSTVSTTNNVVQPLFHKPRIRKIGVDKKTNDGKAGVVPRVIKPTSED 72

Query: 70 FPWKGGYNPPH 72
          FPW GGY  PH
Sbjct: 73 FPWGGGYIHPH 83

[Close]
BLAST of CsGy4G010050 vs. ExPASy TrEMBL
Match: A0A0A0KZM0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G152270 PE=4 SV=1)

HSP 1 Score: 154 bits (388), Expect = 2.46e-47
Identity = 75/75 (100.00%), Postives = 75/75 (100.00%), Query Frame = 0 

Query: 1  MASINNIILIIFKLLFFTLLLITTSSAFQPQLHEPHFRKKMRMEYRSVRKAALGGKPAVY 60
          MASINNIILIIFKLLFFTLLLITTSSAFQPQLHEPHFRKKMRMEYRSVRKAALGGKPAVY
Sbjct: 1  MASINNIILIIFKLLFFTLLLITTSSAFQPQLHEPHFRKKMRMEYRSVRKAALGGKPAVY 60

Query: 61 DFPWKGGYNPPHNNR 75
          DFPWKGGYNPPHNNR
Sbjct: 61 DFPWKGGYNPPHNNR 75

[Close]
BLAST of CsGy4G010050 vs. ExPASy TrEMBL
Match: A0A5D3D619 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold418G00680 PE=4 SV=1)

HSP 1 Score: 132 bits (333), Expect = 5.93e-39
Identity = 68/75 (90.67%), Postives = 69/75 (92.00%), Query Frame = 0 

Query: 1  MASINNIILIIFKLLFFTLLLITTSSAFQPQLHEPHFRKKMRMEYRSVRKAALGGKPAVY 60
          MASIN II IIFKLLFFTLLLITTS+AFQPQLHEP FRKKMRMEYRSVRK ALG KPAVY
Sbjct: 1  MASIN-IIWIIFKLLFFTLLLITTSTAFQPQLHEPRFRKKMRMEYRSVRKGALGAKPAVY 60

Query: 61 DFPWKGGYNPPHNNR 75
          DFPWKGGYNPP NNR
Sbjct: 61 DFPWKGGYNPPDNNR 74

[Close]
BLAST of CsGy4G010050 vs. ExPASy TrEMBL
Match: A0A6J1CHY3 (uncharacterized protein LOC111011803 OS=Momordica charantia OX=3673 GN=LOC111011803 PE=4 SV=1)

HSP 1 Score: 74.7 bits (182), Expect = 1.82e-15
Identity = 38/65 (58.46%), Postives = 45/65 (69.23%), Query Frame = 0 

Query: 11  IFKLLFFTLLLITTS-SAFQPQLHEPHFRKKMRMEYRSVRKAALGGKPAVYDFPWKGGYN 70
           + KL FF LLLI +  SA  P +H+    +K+ MEYRSV KA L  K A YDFPWKGGYN
Sbjct: 50  VLKLFFFALLLIASRVSASTPSIHKRPRIRKLGMEYRSVGKAVLRAKAASYDFPWKGGYN 109

Query: 71  PPHNN 74
           PP+NN
Sbjct: 110 PPNNN 114

[Close]
BLAST of CsGy4G010050 vs. ExPASy TrEMBL
Match: A0A0A0L653 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G175590 PE=4 SV=1)

HSP 1 Score: 46.6 bits (109), Expect = 9.27e-05
Identity = 30/71 (42.25%), Postives = 39/71 (54.93%), Query Frame = 0 

Query: 10 IIFKLLFFTLLLI-----TTSSAFQPQLHEPHFRKKMRMEYRSVRKAALGG---KPAVYD 69
          ++ KLLFF+LLLI     TT++  QP  H+P  RK    +  +  KA +     KP   D
Sbjct: 9  LLLKLLFFSLLLIFSTVSTTNNVVQPLFHKPRIRKIGVDKKTNDGKAGVVPRVIKPTSED 68

Query: 70 FPWKGGYNPPH 72
          FPW GGY  PH
Sbjct: 69 FPWGGGYIHPH 79

The following BLAST results are available for this feature:
BLAST of CsGy4G010050 vs.
Match NameE-valueIdentityDescription
BLAST of CsGy4G010050 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN53822.15.08e-47100.00hypothetical protein Csa_015192 [Cucumis sativus][more]
TYK18975.11.22e-3890.67hypothetical protein E5676_scaffold418G00680 [Cucumis melo var. makuwa][more]
XP_022141390.13.75e-1558.46uncharacterized protein LOC111011803 [Momordica charantia][more]
KAG6602002.17.09e-1357.63hypothetical protein SDJN03_07235, partial [Cucurbita argyrosperma subsp. sorori... [more]
KAE8650426.12.09e-0442.25hypothetical protein Csa_009889 [Cucumis sativus][more]
BLAST of CsGy4G010050 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KZM02.46e-47100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G152270 PE=4 SV=1[more]
A0A5D3D6195.93e-3990.67Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A6J1CHY31.82e-1558.46uncharacterized protein LOC111011803 OS=Momordica charantia OX=3673 GN=LOC111011... [more]
A0A0A0L6539.27e-0542.25Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G175590 PE=4 SV=1[more]
BLAST of CsGy4G010050 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsGy4G010050.1CsGy4G010050.1mRNA