CsGy4G009350 (gene) Cucumber (Gy14) v2.1

Overview


Name	CsGy4G009350
Type	gene
Organism	Cucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
Description	Unknown protein
Location	Gy14Chr4: 7686320 .. 7687160 (-)
RNA-Seq Expression	CsGy4G009350
Synteny	CsGy4G009350

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATCATTCTCAAACGCATCGATATCTTAAGCCCCCCTTTTGAGTTTGTGTGTGCATTTGTTTTAATCTCCCACCTCCACCAGGCTCGCATTAGTCCCAACCAACTTTATTTTTCCACAATGGGAGGTTGTGCGAGCAAACCCAAGGGTATGGATCTCCACCCAAGCGAGGTTTCCGCTACACCCACAAACAAGCCCCAGACCCAGGCAACTGAGATCGTTACTCAGGTAAAATTAATTTAATTAAAATGTACTTTCATGAGATCATTGATTATTAGTGTGTCTAGCTTCAAATATATTTTATACTTTACATAATTAATTACGTTACATTATAATAATATGTTTTTCTTTAGGGAAATAATGATGGAGGTAAGAGTGCATCAACAACATTGGTGGACCTGTCCAAATCCAACGAAACAAAACAGGACAAAGCTGGTGGAGATGTTGAGCTTGAGCCTGCCTCTGGAGTTCCTAATTATGATAAATCAACTGCTCTCAACCTTACCCAAGCGGAGAAAGTCGAAGGCATTGCCAAAGAATCAGAGGACAAGAGTGAGGCTATTGTCAAGAACACTCAGACCAAGGAGGGCCACCCTAGGATGACGATTGGTGCGGATGCCGCCAAATTAGATGCCACTCCAACTCCAACCTCTGAACCCAAAAACATGGCACCCCTTGATGTAGCGATCTAACCTAACCATACTTTTTATTTGTTTTCTATATACCTATATTCAACTCATCCATATATTCATATTAACTCCACTTATCCTTCTATTCAAATTTCACGAAACCAACCAACAATTCTTGATTATGTATATTATTCACCATCTTCTACTTAATCCAC

mRNA sequence

ATCATTCTCAAACGCATCGATATCTTAAGCCCCCCTTTTGAGTTTGTGTGTGCATTTGTTTTAATCTCCCACCTCCACCAGGCTCGCATTAGTCCCAACCAACTTTATTTTTCCACAATGGGAGGTTGTGCGAGCAAACCCAAGGGTATGGATCTCCACCCAAGCGAGGTTTCCGCTACACCCACAAACAAGCCCCAGACCCAGGCAACTGAGATCGTTACTCAGGGAAATAATGATGGAGGTAAGAGTGCATCAACAACATTGGTGGACCTGTCCAAATCCAACGAAACAAAACAGGACAAAGCTGGTGGAGATGTTGAGCTTGAGCCTGCCTCTGGAGTTCCTAATTATGATAAATCAACTGCTCTCAACCTTACCCAAGCGGAGAAAGTCGAAGGCATTGCCAAAGAATCAGAGGACAAGAGTGAGGCTATTGTCAAGAACACTCAGACCAAGGAGGGCCACCCTAGGATGACGATTGGTGCGGATGCCGCCAAATTAGATGCCACTCCAACTCCAACCTCTGAACCCAAAAACATGGCACCCCTTGATGTAGCGATCTAACCTAACCATACTTTTTATTTGTTTTCTATATACCTATATTCAACTCATCCATATATTCATATTAACTCCACTTATCCTTCTATTCAAATTTCACGAAACCAACCAACAATTCTTGATTATGTATATTATTCACCATCTTCTACTTAATCCAC

Coding sequence (CDS)

ATGGGAGGTTGTGCGAGCAAACCCAAGGGTATGGATCTCCACCCAAGCGAGGTTTCCGCTACACCCACAAACAAGCCCCAGACCCAGGCAACTGAGATCGTTACTCAGGGAAATAATGATGGAGGTAAGAGTGCATCAACAACATTGGTGGACCTGTCCAAATCCAACGAAACAAAACAGGACAAAGCTGGTGGAGATGTTGAGCTTGAGCCTGCCTCTGGAGTTCCTAATTATGATAAATCAACTGCTCTCAACCTTACCCAAGCGGAGAAAGTCGAAGGCATTGCCAAAGAATCAGAGGACAAGAGTGAGGCTATTGTCAAGAACACTCAGACCAAGGAGGGCCACCCTAGGATGACGATTGGTGCGGATGCCGCCAAATTAGATGCCACTCCAACTCCAACCTCTGAACCCAAAAACATGGCACCCCTTGATGTAGCGATCTAA

Protein sequence

MGGCASKPKGMDLHPSEVSATPTNKPQTQATEIVTQGNNDGGKSASTTLVDLSKSNETKQDKAGGDVELEPASGVPNYDKSTALNLTQAEKVEGIAKESEDKSEAIVKNTQTKEGHPRMTIGADAAKLDATPTPTSEPKNMAPLDVAI*

Homology

[Close]

BLAST of CsGy4G009350 vs. NCBI nr
Match: XP_011653400.1 (uncharacterized protein LOC105435210 [Cucumis sativus] >KGN53750.1 hypothetical protein Csa_014628 [Cucumis sativus])

HSP 1 Score: 285 bits (728), Expect = 1.46e-96
Identity = 148/148 (100.00%), Postives = 148/148 (100.00%), Query Frame = 0


Query: 1   MGGCASKPKGMDLHPSEVSATPTNKPQTQATEIVTQGNNDGGKSASTTLVDLSKSNETKQ 60
           MGGCASKPKGMDLHPSEVSATPTNKPQTQATEIVTQGNNDGGKSASTTLVDLSKSNETKQ
Sbjct: 1   MGGCASKPKGMDLHPSEVSATPTNKPQTQATEIVTQGNNDGGKSASTTLVDLSKSNETKQ 60

Query: 61  DKAGGDVELEPASGVPNYDKSTALNLTQAEKVEGIAKESEDKSEAIVKNTQTKEGHPRMT 120
           DKAGGDVELEPASGVPNYDKSTALNLTQAEKVEGIAKESEDKSEAIVKNTQTKEGHPRMT
Sbjct: 61  DKAGGDVELEPASGVPNYDKSTALNLTQAEKVEGIAKESEDKSEAIVKNTQTKEGHPRMT 120

Query: 121 IGADAAKLDATPTPTSEPKNMAPLDVAI 148
           IGADAAKLDATPTPTSEPKNMAPLDVAI
Sbjct: 121 IGADAAKLDATPTPTSEPKNMAPLDVAI 148

[Close]

BLAST of CsGy4G009350 vs. NCBI nr
Match: TYK04607.1 (uncharacterized protein E5676_scaffold351G00110 [Cucumis melo var. makuwa])

HSP 1 Score: 222 bits (566), Expect = 8.24e-72
Identity = 119/152 (78.29%), Postives = 130/152 (85.53%), Query Frame = 0


Query: 1   MGGCASKPKGMDLHPSEVSATPTNKPQTQ----ATEIVTQGNNDGGKSASTTLVDLSKSN 60
           MGGCASKPKGMDLHP+EV  TPTN+PQ Q    ATE +TQGNNDGG++ASTTLVDLSKS 
Sbjct: 1   MGGCASKPKGMDLHPTEVPTTPTNEPQPQSQPKATETITQGNNDGGENASTTLVDLSKSF 60

Query: 61  ETKQDKAGGDVELEPASGVPNYDKSTALNLTQAEKVEGIAKESEDKSEAIVKNTQTKEGH 120
           E KQD+A GDV+L+ A GVPNYDKST  NLT  EKVEGIAKE+EDK+EAIV+NTQTKEGH
Sbjct: 61  EPKQDEAVGDVKLKSAPGVPNYDKSTTPNLTHDEKVEGIAKETEDKNEAIVQNTQTKEGH 120

Query: 121 PRMTIGADAAKLDATPTPTSEPKNMAPLDVAI 148
           PR T GADAAK DATPTPTSE K MAPLDVAI
Sbjct: 121 PRTTFGADAAKSDATPTPTSEHKTMAPLDVAI 152

[Close]

BLAST of CsGy4G009350 vs. NCBI nr
Match: KAA0056646.1 (uncharacterized protein E6C27_scaffold288G001770 [Cucumis melo var. makuwa])

HSP 1 Score: 216 bits (550), Expect = 2.25e-69
Identity = 117/152 (76.97%), Postives = 128/152 (84.21%), Query Frame = 0


Query: 1   MGGCASKPKGMDLHPSEVSATPTNKPQTQ----ATEIVTQGNNDGGKSASTTLVDLSKSN 60
           MGGCASKPKGMDLHP+EV  TPTN+PQ Q    ATE +TQGNNDGG++ASTTLVDLSKS 
Sbjct: 1   MGGCASKPKGMDLHPTEVPTTPTNEPQPQSQPKATETITQGNNDGGENASTTLVDLSKSF 60

Query: 61  ETKQDKAGGDVELEPASGVPNYDKSTALNLTQAEKVEGIAKESEDKSEAIVKNTQTKEGH 120
           E KQD+A GDV+L+ A  V NYDKST  NLT  EKVEGIAKE+EDK+EAIV+NTQTKEGH
Sbjct: 61  EPKQDEAVGDVKLKSAPRVSNYDKSTTPNLTHDEKVEGIAKETEDKNEAIVQNTQTKEGH 120

Query: 121 PRMTIGADAAKLDATPTPTSEPKNMAPLDVAI 148
           PR T GADAAK DATPTPTSE K MAPLDVAI
Sbjct: 121 PRTTFGADAAKSDATPTPTSEHKTMAPLDVAI 152

[Close]

BLAST of CsGy4G009350 vs. NCBI nr
Match: XP_038875809.1 (uncharacterized protein LOC120068172 [Benincasa hispida])

HSP 1 Score: 204 bits (520), Expect = 5.64e-65
Identity = 112/148 (75.68%), Postives = 120/148 (81.08%), Query Frame = 0


Query: 1   MGGCASKPKGMDLHPSEVSATPTNKPQTQATEIVTQGNNDGGKSASTTLVDLSKSNETKQ 60
           MGGCASKPKGMDLHP+EV ATPT+KPQ QA E ++QGNNDGG+SASTTLVDLS+SNE KQ
Sbjct: 1   MGGCASKPKGMDLHPNEVPATPTDKPQPQAAETISQGNNDGGESASTTLVDLSESNEPKQ 60

Query: 61  DKAGGDVELEPASGVPNYDKSTALNLTQAEKVEGIAKESEDKSEAIVKNTQTKEGHPRMT 120
           D+AGGDVE EPA GVPNY KST   LT  EKVE IAKESED       N QTKEGHPR T
Sbjct: 61  DEAGGDVEPEPAPGVPNYHKSTTPELTHVEKVEAIAKESED-------NIQTKEGHPRTT 120

Query: 121 IGADAAKLDATPTPTSEPKNMAPLDVAI 148
             ADAAK DATPTPTSE K MAP+DVAI
Sbjct: 121 -SADAAKSDATPTPTSEHKTMAPVDVAI 140

[Close]

BLAST of CsGy4G009350 vs. NCBI nr
Match: RVW41305.1 (hypothetical protein CK203_085157 [Vitis vinifera] >RVW60902.1 hypothetical protein CK203_049304 [Vitis vinifera])

HSP 1 Score: 49.3 bits (116), Expect = 6.00e-04
Identity = 50/165 (30.30%), Postives = 76/165 (46.06%), Query Frame = 0


Query: 1   MGGCASKPKGMDL----HPSEVSATPTNKPQTQATEIVTQGNNDGGK-SASTTLVDLSKS 60
           MGGCASKPK MD      PSE  ++P +K   + T +V +  N+GG+      LVDLS  
Sbjct: 1   MGGCASKPKDMDAPPQSRPSEAPSSP-DKSNGEPTHVVQEEKNNGGEIREEEPLVDLS-- 60

Query: 61  NETKQDKAGGDVELEPASGV----PNYDKSTALNLTQAEKVEGIAKESEDKS-------- 120
            E K ++    +E +            D +T     + +KVE    E ++++        
Sbjct: 61  -EPKPNQEAPTIETKAVESEVLVSELVDDATVDKPVEEKKVETAEPEHKEENAKAEAGAG 120

Query: 121 ----EAIVKNTQTKEGHPRMTIGADAAKLDATPTPTSEPKNMAPL 144
               EA+ K  + +E     T G +  ++D    P+SE KN APL
Sbjct: 121 EVATEAVKKEQKVEEEPVGKTKGGEIKQVDVARPPSSEDKNNAPL 161

[Close]

BLAST of CsGy4G009350 vs. ExPASy TrEMBL
Match: A0A0A0KVU8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G120780 PE=4 SV=1)

HSP 1 Score: 285 bits (728), Expect = 7.06e-97
Identity = 148/148 (100.00%), Postives = 148/148 (100.00%), Query Frame = 0


Query: 1   MGGCASKPKGMDLHPSEVSATPTNKPQTQATEIVTQGNNDGGKSASTTLVDLSKSNETKQ 60
           MGGCASKPKGMDLHPSEVSATPTNKPQTQATEIVTQGNNDGGKSASTTLVDLSKSNETKQ
Sbjct: 1   MGGCASKPKGMDLHPSEVSATPTNKPQTQATEIVTQGNNDGGKSASTTLVDLSKSNETKQ 60

Query: 61  DKAGGDVELEPASGVPNYDKSTALNLTQAEKVEGIAKESEDKSEAIVKNTQTKEGHPRMT 120
           DKAGGDVELEPASGVPNYDKSTALNLTQAEKVEGIAKESEDKSEAIVKNTQTKEGHPRMT
Sbjct: 61  DKAGGDVELEPASGVPNYDKSTALNLTQAEKVEGIAKESEDKSEAIVKNTQTKEGHPRMT 120

Query: 121 IGADAAKLDATPTPTSEPKNMAPLDVAI 148
           IGADAAKLDATPTPTSEPKNMAPLDVAI
Sbjct: 121 IGADAAKLDATPTPTSEPKNMAPLDVAI 148

[Close]

BLAST of CsGy4G009350 vs. ExPASy TrEMBL
Match: A0A5D3BYJ6 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold351G00110 PE=4 SV=1)

HSP 1 Score: 222 bits (566), Expect = 3.99e-72
Identity = 119/152 (78.29%), Postives = 130/152 (85.53%), Query Frame = 0


Query: 1   MGGCASKPKGMDLHPSEVSATPTNKPQTQ----ATEIVTQGNNDGGKSASTTLVDLSKSN 60
           MGGCASKPKGMDLHP+EV  TPTN+PQ Q    ATE +TQGNNDGG++ASTTLVDLSKS 
Sbjct: 1   MGGCASKPKGMDLHPTEVPTTPTNEPQPQSQPKATETITQGNNDGGENASTTLVDLSKSF 60

Query: 61  ETKQDKAGGDVELEPASGVPNYDKSTALNLTQAEKVEGIAKESEDKSEAIVKNTQTKEGH 120
           E KQD+A GDV+L+ A GVPNYDKST  NLT  EKVEGIAKE+EDK+EAIV+NTQTKEGH
Sbjct: 61  EPKQDEAVGDVKLKSAPGVPNYDKSTTPNLTHDEKVEGIAKETEDKNEAIVQNTQTKEGH 120

Query: 121 PRMTIGADAAKLDATPTPTSEPKNMAPLDVAI 148
           PR T GADAAK DATPTPTSE K MAPLDVAI
Sbjct: 121 PRTTFGADAAKSDATPTPTSEHKTMAPLDVAI 152

[Close]

BLAST of CsGy4G009350 vs. ExPASy TrEMBL
Match: A0A5A7UQQ8 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold288G001770 PE=4 SV=1)

HSP 1 Score: 216 bits (550), Expect = 1.09e-69
Identity = 117/152 (76.97%), Postives = 128/152 (84.21%), Query Frame = 0


Query: 1   MGGCASKPKGMDLHPSEVSATPTNKPQTQ----ATEIVTQGNNDGGKSASTTLVDLSKSN 60
           MGGCASKPKGMDLHP+EV  TPTN+PQ Q    ATE +TQGNNDGG++ASTTLVDLSKS 
Sbjct: 1   MGGCASKPKGMDLHPTEVPTTPTNEPQPQSQPKATETITQGNNDGGENASTTLVDLSKSF 60

Query: 61  ETKQDKAGGDVELEPASGVPNYDKSTALNLTQAEKVEGIAKESEDKSEAIVKNTQTKEGH 120
           E KQD+A GDV+L+ A  V NYDKST  NLT  EKVEGIAKE+EDK+EAIV+NTQTKEGH
Sbjct: 61  EPKQDEAVGDVKLKSAPRVSNYDKSTTPNLTHDEKVEGIAKETEDKNEAIVQNTQTKEGH 120

Query: 121 PRMTIGADAAKLDATPTPTSEPKNMAPLDVAI 148
           PR T GADAAK DATPTPTSE K MAPLDVAI
Sbjct: 121 PRTTFGADAAKSDATPTPTSEHKTMAPLDVAI 152

[Close]

BLAST of CsGy4G009350 vs. ExPASy TrEMBL
Match: A0A2N9HQH8 (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS42394 PE=4 SV=1)

HSP 1 Score: 50.4 bits (119), Expect = 8.05e-05
Identity = 53/150 (35.33%), Postives = 71/150 (47.33%), Query Frame = 0


Query: 1   MGGCASKPKGMDLHPSEVSATPTNKPQTQATEIVTQGNNDGGKSASTT-LVDLSKSNETK 60
           MGGCASKPK  D+    +    +   Q    E V Q + +GG++ S   LVDLS+S E  
Sbjct: 1   MGGCASKPKESDIQKELLPNDDSAISQKAEGETVAQESKNGGENQSEAPLVDLSESKEET 60

Query: 61  QDKAGGDVELEPASGVPNYDKSTALNLTQAEKVEGIAKESEDKSEAIVKNTQTK--EGHP 120
           +++ G D+  EP        K+        E  E IAK +EDK EA  K T+ K   G+ 
Sbjct: 61  KEE-GKDLSSEP--------KTAEAAPVSVEAGEEIAKATEDKVEAPAKTTEEKVEAGNE 120

Query: 121 RMTIGADAAKLDA---TPTPTSEPKNMAPL 144
                 D A+  A      P+SE K  APL
Sbjct: 121 TQKAVEDQAESKADKPVAAPSSEDKIDAPL 141

[Close]

BLAST of CsGy4G009350 vs. ExPASy TrEMBL
Match: A0A438FLL8 (Uncharacterized protein OS=Vitis vinifera OX=29760 GN=CK203_049304 PE=4 SV=1)

HSP 1 Score: 49.3 bits (116), Expect = 2.91e-04
Identity = 50/165 (30.30%), Postives = 76/165 (46.06%), Query Frame = 0


Query: 1   MGGCASKPKGMDL----HPSEVSATPTNKPQTQATEIVTQGNNDGGK-SASTTLVDLSKS 60
           MGGCASKPK MD      PSE  ++P +K   + T +V +  N+GG+      LVDLS  
Sbjct: 1   MGGCASKPKDMDAPPQSRPSEAPSSP-DKSNGEPTHVVQEEKNNGGEIREEEPLVDLS-- 60

Query: 61  NETKQDKAGGDVELEPASGV----PNYDKSTALNLTQAEKVEGIAKESEDKS-------- 120
            E K ++    +E +            D +T     + +KVE    E ++++        
Sbjct: 61  -EPKPNQEAPTIETKAVESEVLVSELVDDATVDKPVEEKKVETAEPEHKEENAKAEAGAG 120

Query: 121 ----EAIVKNTQTKEGHPRMTIGADAAKLDATPTPTSEPKNMAPL 144
               EA+ K  + +E     T G +  ++D    P+SE KN APL
Sbjct: 121 EVATEAVKKEQKVEEEPVGKTKGGEIKQVDVARPPSSEDKNNAPL 161

The following BLAST results are available for this feature:

BLAST of CsGy4G009350 vs.


Match Name	E-value	Identity	Description

BLAST of CsGy4G009350 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_011653400.1	1.46e-96	100.00	uncharacterized protein LOC105435210 [Cucumis sativus] >KGN53750.1 hypothetical ...	[more]
TYK04607.1	8.24e-72	78.29	uncharacterized protein E5676_scaffold351G00110 [Cucumis melo var. makuwa]	[more]
KAA0056646.1	2.25e-69	76.97	uncharacterized protein E6C27_scaffold288G001770 [Cucumis melo var. makuwa]	[more]
XP_038875809.1	5.64e-65	75.68	uncharacterized protein LOC120068172 [Benincasa hispida]	[more]
RVW41305.1	6.00e-04	30.30	hypothetical protein CK203_085157 [Vitis vinifera] >RVW60902.1 hypothetical prot...	[more]

BLAST of CsGy4G009350 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KVU8	7.06e-97	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G120780 PE=4 SV=1	[more]
A0A5D3BYJ6	3.99e-72	78.29	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A5A7UQQ8	1.09e-69	76.97	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]
A0A2N9HQH8	8.05e-05	35.33	Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS42394 PE=4 SV=1	[more]
A0A438FLL8	2.91e-04	30.30	Uncharacterized protein OS=Vitis vinifera OX=29760 GN=CK203_049304 PE=4 SV=1	[more]

BLAST of CsGy4G009350 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Cucumber (Gy14) v2.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..80
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 17..54
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 95..148
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 95..111

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsGy4G009350.2	CsGy4G009350.2	mRNA