CsGy4G009313 (gene) Cucumber (Gy14) v2.1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCCGAAAATTCTCAAAACTTTTCTAGTAGAACACTTGAATCAAATGCTTCATTGTCTTGTGATAATTCGGTTAAAGAACAAGTGAATCTACTAACTAAATGTTTTGCTTCTTTCGTGAAGGGAGAGGCTTCTAAAGTCGCCTCTTGTGCCGTTTGTGACTTGCTAGGTCACCACAATGATCAATCCCCGGAGCTTAAGAGGTAATTGCCATGTGCGGTTTTAGAAGAAGTGATTTATAGAGTAAGACCTACAATTCTGAATGGAGGGATCATCTAAAACTAAGGTTGGGCCCTAAAAAACCCAAACCTATCAACACTTCCACTTCCTCATCTTCATCATAAGGTACCTACCTAGAGGAGATCATCTTAAAGTTAGCTCTTAGCTCAAATAGTTTCTAAATTGATTTTGAGAAGAATTTAACTAAGTTGAGTGAACAAACCATTAATACATCTGAAGCTATTAGAAGTGACAGATATTCTGAAAGCATCAATTACTGAGTTTAGGACATAAGTTTAATCAATTAGCAACACATGTTCTTAGAACGAAAGGGAAGGTCAAAATTTCCGCCCAACCCGACCATGCAGACTTGAGTGCTATTACTTTAAGAAGTGAATTTTTTTAAAATAAAAATGATGCTATTTCCTTGTCTCAAAGTGATCCAAACTTAGAAAAAGTCAATTCTAACGAAGAAAATAAGGTACACACTAACCCTTCTTCCTCTAATGCTTTTTCTTCTTCCAACAATGATTCAAGAGACTTTACTACTAATCCTCAATTTCCTTCTAGGCTTACACTAACAAGGAAGGAAATTAAGAATGACGAAGAAATCCTTAAAGTCTTCAAGAAGGTAGAAGTGAACCTTTCCCTCTTGACGGAAATCAAGAGCATATCGAGGTATGCAAAGTTTCCCAAAGAATTATATATTCAGAGGAGGAGCAGGAGCCAAGAAAAAACAACGATTAGTAGAAATGTATTTTCTCTTTTAAAGAAAAATCTTCCAGAAAAATGTGTTGATCCAGGTATGTTTTCACTCCCTTGCACAATTAGTAATATATACATATCTAATGCAATGCTTGATTTGGGTGCATTAATAAATGTCATGCCTTTTAGCATTTTTAAAGATTTAAGACTAAATGGACTTGAAAAGACTAGCATTTGTGTACAATTAGCCAACTGGTGTTTTACCTCACCATTAGAGATTGTAGAAGATGTTGAAATCAAAGTAGGAAACCTTATATTACCTGGTAATTTTTATATAATAGAAATGAACAATGAATATGCATGTACCTTCACTTGCCATTATTCTTTAAGGAAGATCGTTCTTAAAATCTCCGCTAAGGCCATAATTAATGTAGACAAAGGTCTTCTTAGTGTCGATTTTGATGGTGATATAGTGTCATTGAATATTTTTGATGATGTACACTCTTCTACTGATCATACCTCATTGTGTGCATTAGATACAGTAGAAATATTAGTAAAAATATTAGAAGAGCATGATAAATTTAATGAGTTGATTAATCAAGCAACTTTAGATTATGTCGATAATGAATTTTCTAAGAACAAACCTAGTGATGATGATCTCTATTTTCCTTGA ATGGCCGAAAATTCTCAAAACTTTTCTAGTAGAACACTTGAATCAAATGCTTCATTGTCTTGTGATAATTCGGTTAAAGAACAAGTGAATCTACTAACTAAATGTTTTGCTTCTTTCGTGAAGGGAGAGGCTTCTAAAGTCGCCTCTTGTGCCGTTTGTGACTTGCTAGGTCACCACAATGATCAATCCCCGGAGCTTAAGAGGCTTACACTAACAAGGAAGGAAATTAAGAATGACGAAGAAATCCTTAAAGTCTTCAAGAAGGTAGAAGTGAACCTTTCCCTCTTGACGGAAATCAAGAGCATATCGAGGAAGATCGTTCTTAAAATCTCCGCTAAGGCCATAATTAATGTAGACAAAGGTCTTCTTAGTGTCGATTTTGATGGTGATATAGTGTCATTGAATATTTTTGATGATGTACACTCTTCTACTGATCATACCTCATTGTGTGCATTAGATACAGTAGAAATATTAGTAAAAATATTAGAAGAGCATGATAAATTTAATGAGTTGATTAATCAAGCAACTTTAGATTATGTCGATAATGAATTTTCTAAGAACAAACCTAGTGATGATGATCTCTATTTTCCTTGA ATGGCCGAAAATTCTCAAAACTTTTCTAGTAGAACACTTGAATCAAATGCTTCATTGTCTTGTGATAATTCGGTTAAAGAACAAGTGAATCTACTAACTAAATGTTTTGCTTCTTTCGTGAAGGGAGAGGCTTCTAAAGTCGCCTCTTGTGCCGTTTGTGACTTGCTAGGTCACCACAATGATCAATCCCCGGAGCTTAAGAGGCTTACACTAACAAGGAAGGAAATTAAGAATGACGAAGAAATCCTTAAAGTCTTCAAGAAGGTAGAAGTGAACCTTTCCCTCTTGACGGAAATCAAGAGCATATCGAGGAAGATCGTTCTTAAAATCTCCGCTAAGGCCATAATTAATGTAGACAAAGGTCTTCTTAGTGTCGATTTTGATGGTGATATAGTGTCATTGAATATTTTTGATGATGTACACTCTTCTACTGATCATACCTCATTGTGTGCATTAGATACAGTAGAAATATTAGTAAAAATATTAGAAGAGCATGATAAATTTAATGAGTTGATTAATCAAGCAACTTTAGATTATGTCGATAATGAATTTTCTAAGAACAAACCTAGTGATGATGATCTCTATTTTCCTTGA MAENSQNFSSRTLESNASLSCDNSVKEQVNLLTKCFASFVKGEASKVASCAVCDLLGHHNDQSPELKRLTLTRKEIKNDEEILKVFKKVEVNLSLLTEIKSISRKIVLKISAKAIINVDKGLLSVDFDGDIVSLNIFDDVHSSTDHTSLCALDTVEILVKILEEHDKFNELINQATLDYVDNEFSKNKPSDDDLYFP* Homology
BLAST of CsGy4G009313 vs. NCBI nr
Match: KAE8649315.1 (hypothetical protein Csa_014717 [Cucumis sativus]) HSP 1 Score: 357 bits (916), Expect = 1.32e-123 Identity = 192/198 (96.97%), Postives = 195/198 (98.48%), Query Frame = 0
BLAST of CsGy4G009313 vs. NCBI nr
Match: KAA0042324.1 (Retrovirus-related Pol polyprotein from transposon 297 family [Cucumis melo var. makuwa] >TYK15448.1 Retrovirus-related Pol polyprotein from transposon 297 family [Cucumis melo var. makuwa]) HSP 1 Score: 179 bits (454), Expect = 8.01e-51 Identity = 110/196 (56.12%), Postives = 135/196 (68.88%), Query Frame = 0
BLAST of CsGy4G009313 vs. NCBI nr
Match: KAA0062405.1 (Retrovirus-related Pol polyprotein from transposon 297 family [Cucumis melo var. makuwa] >TYK26576.1 Retrovirus-related Pol polyprotein from transposon 297 family [Cucumis melo var. makuwa]) HSP 1 Score: 152 bits (384), Expect = 1.39e-40 Identity = 95/167 (56.89%), Postives = 110/167 (65.87%), Query Frame = 0
BLAST of CsGy4G009313 vs. NCBI nr
Match: KAA0041704.1 (uncharacterized protein E6C27_scaffold67G00370 [Cucumis melo var. makuwa] >TYK06328.1 uncharacterized protein E5676_scaffold594G00410 [Cucumis melo var. makuwa]) HSP 1 Score: 142 bits (358), Expect = 3.78e-37 Identity = 110/273 (40.29%), Postives = 123/273 (45.05%), Query Frame = 0
BLAST of CsGy4G009313 vs. NCBI nr
Match: KAA0066992.1 (Transposon Ty3-I Gag-Pol polyprotein [Cucumis melo var. makuwa] >TYJ96801.1 Transposon Ty3-I Gag-Pol polyprotein [Cucumis melo var. makuwa]) HSP 1 Score: 144 bits (362), Expect = 6.33e-37 Identity = 93/173 (53.76%), Postives = 111/173 (64.16%), Query Frame = 0
BLAST of CsGy4G009313 vs. ExPASy TrEMBL
Match: A0A5D3CW21 (Retrovirus-related Pol polyprotein from transposon 297 family OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold477G00170 PE=4 SV=1) HSP 1 Score: 179 bits (454), Expect = 3.88e-51 Identity = 110/196 (56.12%), Postives = 135/196 (68.88%), Query Frame = 0
BLAST of CsGy4G009313 vs. ExPASy TrEMBL
Match: A0A5D3DS97 (Retrovirus-related Pol polyprotein from transposon 297 family OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold313G001930 PE=4 SV=1) HSP 1 Score: 152 bits (384), Expect = 6.72e-41 Identity = 95/167 (56.89%), Postives = 110/167 (65.87%), Query Frame = 0
BLAST of CsGy4G009313 vs. ExPASy TrEMBL
Match: A0A5A7TE46 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold594G00410 PE=4 SV=1) HSP 1 Score: 142 bits (358), Expect = 1.83e-37 Identity = 110/273 (40.29%), Postives = 123/273 (45.05%), Query Frame = 0
BLAST of CsGy4G009313 vs. ExPASy TrEMBL
Match: A0A5D3BDS0 (Transposon Ty3-I Gag-Pol polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold233G00190 PE=4 SV=1) HSP 1 Score: 144 bits (362), Expect = 3.06e-37 Identity = 93/173 (53.76%), Postives = 111/173 (64.16%), Query Frame = 0
BLAST of CsGy4G009313 vs. ExPASy TrEMBL
Match: A0A5D3DU65 (Retrotransposon gag protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold394G00010 PE=4 SV=1) HSP 1 Score: 138 bits (348), Expect = 1.64e-36 Identity = 79/128 (61.72%), Postives = 97/128 (75.78%), Query Frame = 0
The following BLAST results are available for this feature:
Relationships
The following mRNA feature(s) are a part of this gene:
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