CsGy4G006595 (gene) Cucumber (Gy14) v2.1

Overview


Name	CsGy4G006595
Type	gene
Organism	Cucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
Description	Unknown protein
Location	Gy14Chr4: 4794436 .. 4796092 (-)
RNA-Seq Expression	CsGy4G006595
Synteny	CsGy4G006595

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATAAAACCCTAATTTGTTTCTGTTTTCTTAATTCTAACCCTAGCCACTCTCATATATCCTTCTCAAAAAATTATACCCTCCCATCCATGGCTGCCTTTATCAAGACCTTCATTTTCATCTTCCTCATCATCTTCATGTTCCCTAATTCAGGTATACTGTAGATTAGATATTCGAGTTCATTTACTAATTTTTCTATCATTTTGTTTTTTTGTTTGAAAACAAGTGTACATCACTTCATAAGAATTAGGGTTTTGTAAAAAAATTGTTGTCCTAACATTAATTTATATCTTTTTCAATTGAGATCATCTCACAAATTACTTTAGGGTTTAGATCTCTCTATCCGGGTCAGTGTTCAAAAATGGAAACTAGGGTTCCATAATTTTGCAATTTATTTTTTCTCCCTTTTTTTTTGTAGGGGACGCTCATGACCTGAGCTTGAAGAAGGGTTTGAAGCTTTCAAACCCTTGTGGACAGGTGAGAAAAACCCTAATCTGGATTCTTTTTCAAACATTCCAAGTGGAGATCAAACTATCAACATTTAAATTTGAACTTGATTCTATTATATATACTCAACAATTAAACTTCAAAATTTGAAACCTAATTGTCGTTTGAGGTGCATGTTCAACTTCTTTATGTTTTGGAAAATTCTTAAGCTTCTATTAACAACTTAGCTAGTTTTCGAGTTCAAATGTTCGCCCATATTTGTACTTAATTTAAAAAGTTCTTTACAAAATAACTAAGCTTAGGGTTTGAACGATCTAGAGAAGCACTTGGGTTTGGGTTTAGAAAATTGTGGATAAAATAAAAACTCTTTTCTTAAAAGAAAATTGAGAAGCAAATAAAATTTATTTTGATTTTAATTTATCAACGTCCGTGGATTTGCCTAACAAATTAACCCTAGATGAGCAACCATGAGTTCGGCTTTAAAACCTAACCTTTTCACTCCAAACACATTCTTAAAGCTATTGATTTGCATTTGAAATAAACCGGTAGACGTTTTTCTTTGAAAAAGATGCGTTGGATCAGCAGATGTACCCGAACATCTCCACTAGGTGGACACCCCTTAGGATCTTCATCATTCCCACTCCCATTAATATAGAAAGAACTAGTACAACAAGAGACAATACAAATATAAAAATATTAATATCCACATCAAGATAACTCGAATTTAGCAATAAATCAAGAAACATATCATGCATCCATTTATATCAATGCATGAATGAACAAATTAAACCAGGTATAAAATCATTTATAATTGACCATACTCTTGAAATTACAGTTGATAGTTGAAAAGAACAACAAAGTGACAAGAAAGCTTTTGGGAGCAGAAGCATTTGCAGACTATGCAAGCCCAGATCATAACACAAGACATGAGCCAAGGTTTGGAAACCCCGGAGGTAGAGCTTAAGTGCCAATCCATAAGTGGTTGGTGAAATTAAGGGCTTCAGAAAAACTTCCAACTTAGAGTGATATATTATATGTATATATATGATGTGTTTTTGTGAAGAGAGAAAATATAATTTCAATTCATTATGGAGTGCGTAAGATATATGTTTGTTATAGAGAGTGAGTGTATGATATTCATTGTGAAAAAGAGTGATCTTTGGTATGTAATATATATAAAAATATGACGATGAATGTGAAAATATTTTGTGTG

mRNA sequence

ATAAAACCCTAATTTGTTTCTGTTTTCTTAATTCTAACCCTAGCCACTCTCATATATCCTTCTCAAAAAATTATACCCTCCCATCCATGGCTGCCTTTATCAAGACCTTCATTTTCATCTTCCTCATCATCTTCATGTTCCCTAATTCAGGGGACGCTCATGACCTGAGCTTGAAGAAGGGTTTGAAGCTTTCAAACCCTTGTGGACAGTTGATAGTTGAAAAGAACAACAAAGTGACAAGAAAGCTTTTGGGAGCAGAAGCATTTGCAGACTATGCAAGCCCAGATCATAACACAAGACATGAGCCAAGGTTTGGAAACCCCGGAGGTAGAGCTTAAGTGCCAATCCATAAGTGGTTGGTGAAATTAAGGGCTTCAGAAAAACTTCCAACTTAGAGTGATATATTATATGTATATATATGATGTGTTTTTGTGAAGAGAGAAAATATAATTTCAATTCATTATGGAGTGCGTAAGATATATGTTTGTTATAGAGAGTGAGTGTATGATATTCATTGTGAAAAAGAGTGATCTTTGGTATGTAATATATATAAAAATATGACGATGAATGTGAAAATATTTTGTGTG

Coding sequence (CDS)

ATGGCTGCCTTTATCAAGACCTTCATTTTCATCTTCCTCATCATCTTCATGTTCCCTAATTCAGGGGACGCTCATGACCTGAGCTTGAAGAAGGGTTTGAAGCTTTCAAACCCTTGTGGACAGTTGATAGTTGAAAAGAACAACAAAGTGACAAGAAAGCTTTTGGGAGCAGAAGCATTTGCAGACTATGCAAGCCCAGATCATAACACAAGACATGAGCCAAGGTTTGGAAACCCCGGAGGTAGAGCTTAA

Protein sequence

MAAFIKTFIFIFLIIFMFPNSGDAHDLSLKKGLKLSNPCGQLIVEKNNKVTRKLLGAEAFADYASPDHNTRHEPRFGNPGGRA*

Homology

[Close]

BLAST of CsGy4G006595 vs. NCBI nr
Match: KGN53437.1 (hypothetical protein Csa_015314 [Cucumis sativus])

HSP 1 Score: 170 bits (431), Expect = 2.46e-53
Identity = 83/83 (100.00%), Postives = 83/83 (100.00%), Query Frame = 0


Query: 1  MAAFIKTFIFIFLIIFMFPNSGDAHDLSLKKGLKLSNPCGQLIVEKNNKVTRKLLGAEAF 60
          MAAFIKTFIFIFLIIFMFPNSGDAHDLSLKKGLKLSNPCGQLIVEKNNKVTRKLLGAEAF
Sbjct: 1  MAAFIKTFIFIFLIIFMFPNSGDAHDLSLKKGLKLSNPCGQLIVEKNNKVTRKLLGAEAF 60

Query: 61 ADYASPDHNTRHEPRFGNPGGRA 83
          ADYASPDHNTRHEPRFGNPGGRA
Sbjct: 61 ADYASPDHNTRHEPRFGNPGGRA 83

[Close]

BLAST of CsGy4G006595 vs. NCBI nr
Match: TYK16509.1 (hypothetical protein E5676_scaffold21G003180 [Cucumis melo var. makuwa])

HSP 1 Score: 151 bits (381), Expect = 1.05e-45
Identity = 73/83 (87.95%), Postives = 78/83 (93.98%), Query Frame = 0


Query: 1  MAAFIKTFIFIFLIIFMFPNSGDAHDLSLKKGLKLSNPCGQLIVEKNNKVTRKLLGAEAF 60
          MAAFIKTFIFIFLIIF FP+SGDA DLSLKKGLKLSNPCGQ+IVEKNN+VTRKLLGAE  
Sbjct: 1  MAAFIKTFIFIFLIIFTFPDSGDAGDLSLKKGLKLSNPCGQMIVEKNNRVTRKLLGAEVL 60

Query: 61 ADYASPDHNTRHEPRFGNPGGRA 83
           DYASPDHN+RHEPRFG+PGGRA
Sbjct: 61 LDYASPDHNSRHEPRFGSPGGRA 83

[Close]

BLAST of CsGy4G006595 vs. NCBI nr
Match: KAG6600409.1 (hypothetical protein SDJN03_05642, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 113 bits (282), Expect = 1.29e-30
Identity = 61/83 (73.49%), Postives = 66/83 (79.52%), Query Frame = 0


Query: 1  MAAFIKTFIFIFLIIFMFPNSGDAHDLSLKKGLKLSNPCGQLIVEKNNKVTRKLLGAEAF 60
          MAAF KTFIFIFL+ F+ PNSGDA  L LK+GLKL NPCGQ+I+EK  K  RKLLGAE  
Sbjct: 4  MAAF-KTFIFIFLV-FICPNSGDADGLRLKEGLKLPNPCGQVIIEK--KGVRKLLGAEEL 63

Query: 61 ADYASPDHNTRHEPRFGNPGGRA 83
           DYASP HN RHEPR GNPGGRA
Sbjct: 64 LDYASPSHNPRHEPRVGNPGGRA 82

[Close]

BLAST of CsGy4G006595 vs. NCBI nr
Match: KAG6577123.1 (hypothetical protein SDJN03_24697, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 113 bits (282), Expect = 1.32e-30
Identity = 60/83 (72.29%), Postives = 68/83 (81.93%), Query Frame = 0


Query: 1  MAAFIKTFIFIFLIIFMFPNSGDAHDLSLKKGLKLSNPCGQLIVEKNNKVTRKLLGAEAF 60
          MAAF  TF FIFL+ F +PNSG A  L+LK+GLKL NPCGQ+ VEKN KV RKLLGAE F
Sbjct: 4  MAAF-NTFFFIFLL-FTYPNSGVADGLNLKEGLKLPNPCGQVRVEKN-KVARKLLGAEEF 63

Query: 61 ADYASPDHNTRHEPRFGNPGGRA 83
          +DYASP+HN RHEPR G+PGGRA
Sbjct: 64 SDYASPEHNRRHEPRIGSPGGRA 83

[Close]

BLAST of CsGy4G006595 vs. NCBI nr
Match: KAA0044962.1 (hypothetical protein E6C27_scaffold74G002680 [Cucumis melo var. makuwa] >TYK16508.1 hypothetical protein E5676_scaffold21G003170 [Cucumis melo var. makuwa])

HSP 1 Score: 56.6 bits (135), Expect = 1.77e-08
Identity = 30/60 (50.00%), Postives = 38/60 (63.33%), Query Frame = 0


Query: 27 LSLKKGL--KLSNPCGQLIVEKNNKVTRKLLGAEA--FADYASPDHNTRHEPRFGNPGGR 82
          +SLK+GL  + +NPCGQ+ + +  KV RK+LG E     DY  P  N  HEPR G PGGR
Sbjct: 1  MSLKEGLNEEHNNPCGQMRIGRKGKVMRKILGNEEGILMDYNEPSANPSHEPRRGTPGGR 60

[Close]

BLAST of CsGy4G006595 vs. ExPASy TrEMBL
Match: A0A0A0KYH7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G055320 PE=4 SV=1)

HSP 1 Score: 170 bits (431), Expect = 1.19e-53
Identity = 83/83 (100.00%), Postives = 83/83 (100.00%), Query Frame = 0


Query: 1  MAAFIKTFIFIFLIIFMFPNSGDAHDLSLKKGLKLSNPCGQLIVEKNNKVTRKLLGAEAF 60
          MAAFIKTFIFIFLIIFMFPNSGDAHDLSLKKGLKLSNPCGQLIVEKNNKVTRKLLGAEAF
Sbjct: 1  MAAFIKTFIFIFLIIFMFPNSGDAHDLSLKKGLKLSNPCGQLIVEKNNKVTRKLLGAEAF 60

Query: 61 ADYASPDHNTRHEPRFGNPGGRA 83
          ADYASPDHNTRHEPRFGNPGGRA
Sbjct: 61 ADYASPDHNTRHEPRFGNPGGRA 83

[Close]

BLAST of CsGy4G006595 vs. ExPASy TrEMBL
Match: A0A5D3D203 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold21G003180 PE=4 SV=1)

HSP 1 Score: 151 bits (381), Expect = 5.08e-46
Identity = 73/83 (87.95%), Postives = 78/83 (93.98%), Query Frame = 0


Query: 1  MAAFIKTFIFIFLIIFMFPNSGDAHDLSLKKGLKLSNPCGQLIVEKNNKVTRKLLGAEAF 60
          MAAFIKTFIFIFLIIF FP+SGDA DLSLKKGLKLSNPCGQ+IVEKNN+VTRKLLGAE  
Sbjct: 1  MAAFIKTFIFIFLIIFTFPDSGDAGDLSLKKGLKLSNPCGQMIVEKNNRVTRKLLGAEVL 60

Query: 61 ADYASPDHNTRHEPRFGNPGGRA 83
           DYASPDHN+RHEPRFG+PGGRA
Sbjct: 61 LDYASPDHNSRHEPRFGSPGGRA 83

[Close]

BLAST of CsGy4G006595 vs. ExPASy TrEMBL
Match: A0A5A7TNM7 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold21G003170 PE=4 SV=1)

HSP 1 Score: 56.6 bits (135), Expect = 8.58e-09
Identity = 30/60 (50.00%), Postives = 38/60 (63.33%), Query Frame = 0


Query: 27 LSLKKGL--KLSNPCGQLIVEKNNKVTRKLLGAEA--FADYASPDHNTRHEPRFGNPGGR 82
          +SLK+GL  + +NPCGQ+ + +  KV RK+LG E     DY  P  N  HEPR G PGGR
Sbjct: 1  MSLKEGLNEEHNNPCGQMRIGRKGKVMRKILGNEEGILMDYNEPSANPSHEPRRGTPGGR 60

[Close]

BLAST of CsGy4G006595 vs. ExPASy TrEMBL
Match: A0A5J5A8H2 (Uncharacterized protein OS=Nyssa sinensis OX=561372 GN=F0562_007784 PE=4 SV=1)

HSP 1 Score: 49.3 bits (116), Expect = 9.20e-06
Identity = 28/74 (37.84%), Postives = 42/74 (56.76%), Query Frame = 0


Query: 1  MAAFIKTFIFIFLIIFMFPNSGDAHDLSLKKGLKLSNPCGQLIVEKNNKVTRKLLGAEAF 60
          M   +KTFI I L++F  P+SG  +    K G+KL+NP  ++I++      RKL+G    
Sbjct: 1  MPPMVKTFILIILLLFSCPSSGRPNGT--KDGVKLTNPHNEVIIQMKE---RKLIGIHTM 60

Query: 61 ADYASPDHNTRHEP 74
           DY+S   N  H+P
Sbjct: 61 MDYSSAIANPVHDP 69

The following BLAST results are available for this feature:

BLAST of CsGy4G006595 vs.


Match Name	E-value	Identity	Description

BLAST of CsGy4G006595 vs. NCBI nr


Match Name	E-value	Identity	Description
KGN53437.1	2.46e-53	100.00	hypothetical protein Csa_015314 [Cucumis sativus]	[more]
TYK16509.1	1.05e-45	87.95	hypothetical protein E5676_scaffold21G003180 [Cucumis melo var. makuwa]	[more]
KAG6600409.1	1.29e-30	73.49	hypothetical protein SDJN03_05642, partial [Cucurbita argyrosperma subsp. sorori...	[more]
KAG6577123.1	1.32e-30	72.29	hypothetical protein SDJN03_24697, partial [Cucurbita argyrosperma subsp. sorori...	[more]
KAA0044962.1	1.77e-08	50.00	hypothetical protein E6C27_scaffold74G002680 [Cucumis melo var. makuwa] >TYK1650...	[more]

BLAST of CsGy4G006595 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KYH7	1.19e-53	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G055320 PE=4 SV=1	[more]
A0A5D3D203	5.08e-46	87.95	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A5A7TNM7	8.58e-09	50.00	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A5J5A8H2	9.20e-06	37.84	Uncharacterized protein OS=Nyssa sinensis OX=561372 GN=F0562_007784 PE=4 SV=1	[more]

BLAST of CsGy4G006595 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsGy4G006595.1	CsGy4G006595.1	mRNA