CsGy4G002040 (gene) Cucumber (Gy14) v2.1

Overview


Name	CsGy4G002040
Type	gene
Organism	Cucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
Description	50S ribosomal protein L1
Location	Gy14Chr4: 1203877 .. 1208568 (-)
RNA-Seq Expression	CsGy4G002040
Synteny	CsGy4G002040

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TTGCAATTTCCAAAATAAATGAAGAAAATAGCATAGACGGTCACAACGGACCGGACCGGGGCGGCCGGACTCGACTCATATTTCTAAACCAAGAAGCTGCGATCTCTTCCCGACTTAAACCTCTAAAACCACAGTTTATTTCTTCTCCATCTTGAGGAGCTGCAACCCATCAATGGCAGTTCTCAAGCTCATCCTCACTCATGCTCGCCGCCATTCCTTTGCCAGACCTCCTTCTCTTTCAACTTCTCACTTCCTTCACTTTCGAAGATCACTCTCTTCCTCTCAATCTGATTCTAACCCAGATCCCGATTCTCCCCCTGATCAATCCTCTCCAAGAACCTCTCGTTCCGTTCCCATTCAGCCAGTTTCCTACGCCGTCAAGCCCAAGCCACAAGCCGATGAGAATCAAGATTCCCCAGTAACGCTTCAATCTCCACCGCCTCCACAGGGGCCGCCGCCAAGGCCTGAAGGTCGGAGGACGTGGACTCGTGAGGATGTTCGATATATGAAGGATGCTCCAACTATAACTCCTGTTTCTTATGCGGCACGTGTTGCTCCGCTTCCGGAAGATACGGGTTCGGCTTCCGGTGGAGGAGAAGAGGGTGTGGTGACTGAGCAAATGGAGGAGGAAAGGAAGAAAATTGAGGCGGCGAATCAATGGAGGAGGAGGGTTTTGAGGGTTGCGGAGGAGGAGAAAGTTACTGCTCCATTTCCGATGCTGATCAAAGTCGAGAAGAAGGAACAGAAGGTAGTTCTTGATTTGATAGACGCTATCCGGCAAGTGAAGGTCAGTGTATAAGATTGTGGTTTTAACTTTTCATGGGAAGTTTCTCTAATTCCTGCATTTTGGGAGAATTGAAAGTTGTAGATTGTAGAATATTTGTCTACATGATCTTTGAAGTTGTAAAATGAACGTGCTTTAGAAATGGTTATTGACAATCCCATCCTTTAATTTTCATTTTTTGTTCTTTTTCTTAAAATTCAAGTTCAGGCTGCTGCCAAGGGAAATTTTGATGAGACTGTTGAAGCACATGCAAGGTTGGGGGTTGATGCTAGGAAAATGGTATTGCGTTTATTATTTTTGTACTCAGTGGATTACTCGCTCTCAGTAGGAATTAAGCTTGAATGATTCTGTTACTAGCCTAGATTGGAACTACGGCATTTTAGGAGAGAAAGGAAACCTGGAAATTTCCTTACTCAACTGGTTTATTAGAATGTGATATCCGTTAACGGTTCAGTTTAACCTGACCTTAATAGAGTTTTTAAAGTAGGTTGTCAGAGGGCATATATACGAATGATTTGTCTGATTCACTATTTAAATTTGTTAAAAAGTTTAAATGTGTCTGTTGTTTACTCTGACACTCATTTTATATAACTTCTGAAAGGTATCCACATCCTTTATTTTTAATGAACATGAGATAAAAATGTCTCTTTCACCAGCTGGTTCTGTTCTTTCGTTCTTTAGTATTCTACCTACGTAGTTCTTGCTATGTATTTATCGACTGCAATGTTGTTTGCATTCATGACTTTTTTCCTCTAAAATGCAGCAAGTTCTGGGTAACATGACTCTGCCTCATTCCATTGGGAAGGTAAGCATGTGAATTCTGTTTGAATGAGCATGTCACATTGGAACTCAATATATAATTAATTTGTTGAAAAAATATATATTACCTTTCAGACTGTCAAAGTGGCTTTCTTTGCTGAAGGGGCTGACGCTGAGGAAGCAAGGGCTGCTGGAGCTGATATTGTAGGTGGCCTTGAACTAATAGAGCAAATTGCAAGTAAGAACTGAACTGACCCTATTGGTTTCCTTTTTATTATTAGGGAAAATTTTATTTCATTCTTGTACTTGAACCTATTCAATGAATCAATTTTTCCCTTAAAATTTCAAGTTGTTCAAATTAAATTTAATCCTAATGTTATGAGAGGTGGAATTAGCCCTTTTAAGGTCTCTCTATATTGTCTAGGATTGTCATGAAAAAATAACAGCTTAAGAAGTTTTGTGGAAGTGCACCTAAGTATCGGTTCTTCTTCTTGGATAAACCTTCTCATAATATAGTTCAAATGGGCCCAACGAACATGATCAAAAGCTTTGCAAAATCAAGTTGGTTGTGTTAGTTAGATGAACTTGAATTTCGAACTAATAATTGTTTGGGACTTCATTTCTTTAACTTTATATATGCAGGCAGTCGGAAATTCAATGCTGATAAGTGTTTCTCTACCCCTGAAATGATGAGGCGCATTGGCAAGGTTTATGGAAATTAACTTTTTGTGCATTGTATTGTTCTATGCTGATGGCTGTGTATTCAAGAAGAATATTTTTATAAAACATTTACTCGAAGTTTGATGTTATTGGTGTTTAGATTTCCAAGATTTTGAGACAGCGTGGATTGCTACCAGATCCTAAAGTGAGCACACAATCCTCTGTTTCTTTGGTGTTCCATTGCTTATAGATTGAAATCAAATCAGATGTGCTGACATATTGTATAGCTAGGTACTGTGACCAGTGATATCAAAGGGGCCTTAAAGAAAGCAAGAGAAGGACACATGCATTTTAAAATGGATTCCACATCTATTGTGCATGTGGGGCTTGGGAAGGTAAAATAACTTTAGTTTGAAGCATATAGCTTACTTTCATAAGGAATGCAGATGCTGAAGCAGTTTCAGAAAGTACCCATCTAATTAGCACAAACTGTTTCTTGCAGGTGAGTCATTCGGAAGAGTTCTTACGAGAAAATATTGGTGCATTTGTGAATGCTCTTTTGCTTGCAAAGCCTGTTGGCTTGAAAAAAGGCAAGTTGTACTCTTTTTTCCCCCCATGATACAAATTCATTCAACATTGAACTTCAGTGCTTTTACTACTTTTACGAAAAATGTTCCTATCAACGGACTGACTCTTCTGCCGATAATCATAGCATTTTCTTTGGTTTCTCTGACTGAAATTATATGTACTTGCAGCCTCAAAATATGCTGGATATTTAAATTCCTTCCACATATGTAGCACGGTAATTCTCTCAACTATTGTTATGGCCATTGCAACACTGAATTTCTTAGGAGCATAGTGATACATTGTTGAGTTCAACACTAAAATTATTGTGTGAAAATCTCTCAAGGATCTACTAGGATCATGCAATAGTAATCATGCATGAGTTTCTAACTCCAAACTTGATGAACATGGATCATGGAGGTCCTTGGGACAAATATTGTGATTTCATAAACGGGCTTTCTTTCATTGCAACTTTAAGATCTTATTTTGATGTTAAGTCTAGATATGTATTGCTATAGGCTGCAAGTTATCTGCCTCTTCCTTTTGTGAAATTCCTAAAACTGTTTAAAAAAGTATGTGTCTGTGCTATTTGGATGAATGAGTCACTCAGATGTATGAACATTTTGTGTCAGAATCTGTGAATGTCTTGGCATGAAAATAAGAAGTTCAACGACTCCAAAAATTCTCATAGTACTATTTTGCTATCAAGGATATTGAATAATTCATCTGTAGCATACATATTTAAAATAGTTAAGGGAATGTCGGCTGTTTTGACCAATGATAAATCTTATAAAATGTCTGAAAGGTTAGTAAAGGATATGAGACATGAGACAGTTTATGTTCTAAATATTGACCATAAGACCCCATTCTCTATTTGTCCATCCTTTATTTTTGTAGGTGATAGAATGCTAAGGAATATTATTCAGTATTGAGGGCATGTTAGTTATCAGCTAAGGAAGGGTTATGGTGATCATAAAATAGGGAGAGAATAGGAAATTGTTTAATATTCTAGGCTCTAGTATCATTCCACAAATGATAAAAAAGGAGGTTTCAAGTACCTTAAATACTTGGGAAAGTTTTGTTGTAATTCTGATCCTTATATTTCACTACGTTTGGAGTTCTATTGGTAGGCTATTTATAAGTTGATGCATGTCAGTTTTACTTCCAAATAATTTGTTTATAGTACATGTTCATAAACCGAAATGATGGTTGCACACTTCGCTGATACATATCTCCTCTTTGGGATCTTATATCCTCTTAGTTGCACCTACTGAATGTCTACTAAATGGTGAAATAACTCATTATTTTTGTAATTTGCAGATGGGTCCCGGATTCCCAATCACAATACAATCATTGTCCAAAGTTGCAGATCAATACAACAGAAAGTACTTAAGTGGTGTGGTCCGATGAAATCTAAAGTTGTAGGTTTTTTCGTAGCCATTTTTTCATCTTTGATCTCCCTTTTCCCCAATTATAATTCAATTGTTATAAAGCAGGAAGTAGTCTAGATTGGATTGGATTATGTTCAACTATTTATTGAGGACATTCCATCTTTTTTGTGTACTGAGGTAGAAACTGTTAGCTTTTACTGAATAGCAGCAGAGTCATTTTGATTTTGGCTTTGCTCTGTTTGTTGTATTTACTTGATCGATCTTCTGGGCTCTTGCAGTTTGTTTATCACTAAACACTAGCTGTGGTTTTTGTGGTCTTCAGTACTCCTTGTGACTTGTGAGACTCATAGCTGCTTGTGGAAAATAAAAGGCAAGCTTTCTTATAAAGATAAAGTCTGGATTTGTCAAACAGTTCGGATCTCTTCATTTTTCTTTCTCTATTAATTGAATCAGTGATTAGTTGTCTTTTCTGATCTTACAAATTGAGGTATGAATTACTTATTGGGAGAGTTGATGGTAATTTAAAAAGTAGGT

mRNA sequence

TTGCAATTTCCAAAATAAATGAAGAAAATAGCATAGACGGTCACAACGGACCGGACCGGGGCGGCCGGACTCGACTCATATTTCTAAACCAAGAAGCTGCGATCTCTTCCCGACTTAAACCTCTAAAACCACAGTTTATTTCTTCTCCATCTTGAGGAGCTGCAACCCATCAATGGCAGTTCTCAAGCTCATCCTCACTCATGCTCGCCGCCATTCCTTTGCCAGACCTCCTTCTCTTTCAACTTCTCACTTCCTTCACTTTCGAAGATCACTCTCTTCCTCTCAATCTGATTCTAACCCAGATCCCGATTCTCCCCCTGATCAATCCTCTCCAAGAACCTCTCGTTCCGTTCCCATTCAGCCAGTTTCCTACGCCGTCAAGCCCAAGCCACAAGCCGATGAGAATCAAGATTCCCCAGTAACGCTTCAATCTCCACCGCCTCCACAGGGGCCGCCGCCAAGGCCTGAAGGTCGGAGGACGTGGACTCGTGAGGATGTTCGATATATGAAGGATGCTCCAACTATAACTCCTGTTTCTTATGCGGCACGTGTTGCTCCGCTTCCGGAAGATACGGGTTCGGCTTCCGGTGGAGGAGAAGAGGGTGTGGTGACTGAGCAAATGGAGGAGGAAAGGAAGAAAATTGAGGCGGCGAATCAATGGAGGAGGAGGGTTTTGAGGGTTGCGGAGGAGGAGAAAGTTACTGCTCCATTTCCGATGCTGATCAAAGTCGAGAAGAAGGAACAGAAGGTAGTTCTTGATTTGATAGACGCTATCCGGCAAGTGAAGGCTGCTGCCAAGGGAAATTTTGATGAGACTGTTGAAGCACATGCAAGGTTGGGGGTTGATGCTAGGAAAATGCAAGTTCTGGGTAACATGACTCTGCCTCATTCCATTGGGAAGACTGTCAAAGTGGCTTTCTTTGCTGAAGGGGCTGACGCTGAGGAAGCAAGGGCTGCTGGAGCTGATATTGTAGGTGGCCTTGAACTAATAGAGCAAATTGCAAGCAGTCGGAAATTCAATGCTGATAAGTGTTTCTCTACCCCTGAAATGATGAGGCGCATTGGCAAGATTTCCAAGATTTTGAGACAGCGTGGATTGCTACCAGATCCTAAACTAGGTACTGTGACCAGTGATATCAAAGGGGCCTTAAAGAAAGCAAGAGAAGGACACATGCATTTTAAAATGGATTCCACATCTATTGTGCATGTGGGGCTTGGGAAGGTGAGTCATTCGGAAGAGTTCTTACGAGAAAATATTGGTGCATTTGTGAATGCTCTTTTGCTTGCAAAGCCTGTTGGCTTGAAAAAAGCCTCAAAATATGCTGGATATTTAAATTCCTTCCACATATGTAGCACGATGGGTCCCGGATTCCCAATCACAATACAATCATTGTCCAAAGTTGCAGATCAATACAACAGAAAGTACTTAAGTGGTGTGGTCCGATGAAATCTAAAGTTGTAGGTTTTTTCGTAGCCATTTTTTCATCTTTGATCTCCCTTTTCCCCAATTATAATTCAATTGTTATAAAGCAGGAAGTAGTCTAGATTGGATTGGATTATGTTCAACTATTTATTGAGGACATTCCATCTTTTTTGTGTACTGAGGTAGAAACTGTTAGCTTTTACTGAATAGCAGCAGAGTCATTTTGATTTTGGCTTTGCTCTGTTTGTTGTATTTACTTGATCGATCTTCTGGGCTCTTGCAGTTTGTTTATCACTAAACACTAGCTGTGGTTTTTGTGGTCTTCAGTACTCCTTGTGACTTGTGAGACTCATAGCTGCTTGTGGAAAATAAAAGGCAAGCTTTCTTATAAAGATAAAGTCTGGATTTGTCAAACAGTTCGGATCTCTTCATTTTTCTTTCTCTATTAATTGAATCAGTGATTAGTTGTCTTTTCTGATCTTACAAATTGAGGTATGAATTACTTATTGGGAGAGTTGATGGTAATTTAAAAAGTAGGT

Coding sequence (CDS)

ATGGCAGTTCTCAAGCTCATCCTCACTCATGCTCGCCGCCATTCCTTTGCCAGACCTCCTTCTCTTTCAACTTCTCACTTCCTTCACTTTCGAAGATCACTCTCTTCCTCTCAATCTGATTCTAACCCAGATCCCGATTCTCCCCCTGATCAATCCTCTCCAAGAACCTCTCGTTCCGTTCCCATTCAGCCAGTTTCCTACGCCGTCAAGCCCAAGCCACAAGCCGATGAGAATCAAGATTCCCCAGTAACGCTTCAATCTCCACCGCCTCCACAGGGGCCGCCGCCAAGGCCTGAAGGTCGGAGGACGTGGACTCGTGAGGATGTTCGATATATGAAGGATGCTCCAACTATAACTCCTGTTTCTTATGCGGCACGTGTTGCTCCGCTTCCGGAAGATACGGGTTCGGCTTCCGGTGGAGGAGAAGAGGGTGTGGTGACTGAGCAAATGGAGGAGGAAAGGAAGAAAATTGAGGCGGCGAATCAATGGAGGAGGAGGGTTTTGAGGGTTGCGGAGGAGGAGAAAGTTACTGCTCCATTTCCGATGCTGATCAAAGTCGAGAAGAAGGAACAGAAGGTAGTTCTTGATTTGATAGACGCTATCCGGCAAGTGAAGGCTGCTGCCAAGGGAAATTTTGATGAGACTGTTGAAGCACATGCAAGGTTGGGGGTTGATGCTAGGAAAATGCAAGTTCTGGGTAACATGACTCTGCCTCATTCCATTGGGAAGACTGTCAAAGTGGCTTTCTTTGCTGAAGGGGCTGACGCTGAGGAAGCAAGGGCTGCTGGAGCTGATATTGTAGGTGGCCTTGAACTAATAGAGCAAATTGCAAGCAGTCGGAAATTCAATGCTGATAAGTGTTTCTCTACCCCTGAAATGATGAGGCGCATTGGCAAGATTTCCAAGATTTTGAGACAGCGTGGATTGCTACCAGATCCTAAACTAGGTACTGTGACCAGTGATATCAAAGGGGCCTTAAAGAAAGCAAGAGAAGGACACATGCATTTTAAAATGGATTCCACATCTATTGTGCATGTGGGGCTTGGGAAGGTGAGTCATTCGGAAGAGTTCTTACGAGAAAATATTGGTGCATTTGTGAATGCTCTTTTGCTTGCAAAGCCTGTTGGCTTGAAAAAAGCCTCAAAATATGCTGGATATTTAAATTCCTTCCACATATGTAGCACGATGGGTCCCGGATTCCCAATCACAATACAATCATTGTCCAAAGTTGCAGATCAATACAACAGAAAGTACTTAAGTGGTGTGGTCCGATGA

Protein sequence

MAVLKLILTHARRHSFARPPSLSTSHFLHFRRSLSSSQSDSNPDPDSPPDQSSPRTSRSVPIQPVSYAVKPKPQADENQDSPVTLQSPPPPQGPPPRPEGRRTWTREDVRYMKDAPTITPVSYAARVAPLPEDTGSASGGGEEGVVTEQMEEERKKIEAANQWRRRVLRVAEEEKVTAPFPMLIKVEKKEQKVVLDLIDAIRQVKAAAKGNFDETVEAHARLGVDARKMQVLGNMTLPHSIGKTVKVAFFAEGADAEEARAAGADIVGGLELIEQIASSRKFNADKCFSTPEMMRRIGKISKILRQRGLLPDPKLGTVTSDIKGALKKAREGHMHFKMDSTSIVHVGLGKVSHSEEFLRENIGAFVNALLLAKPVGLKKASKYAGYLNSFHICSTMGPGFPITIQSLSKVADQYNRKYLSGVVR*

Homology

[Close]

BLAST of CsGy4G002040 vs. ExPASy Swiss-Prot
Match: A4WVL9 (50S ribosomal protein L1 OS=Rhodobacter sphaeroides (strain ATCC 17025 / ATH 2.4.3) OX=349102 GN=rplA PE=3 SV=1)

HSP 1 Score: 186.8 bits (473), Expect = 5.0e-46
Identity = 99/217 (45.62%), Postives = 138/217 (63.59%), Query Frame = 0


Query: 192 KVVLDLIDAIRQVKAAAKGNFDETVEAHARLGVDAR--KMQVLGNMTLPHSIGKTVKVAF 251
           K ++ + DA+  +K AA   FDET+E    LGVD R     V G +TLP+  GKTV+VA 
Sbjct: 18  KDMVSVEDAVALIKGAASAKFDETLEVAMNLGVDPRHADQMVRGVVTLPNGTGKTVRVAV 77

Query: 252 FAEGADAEEARAAGADIVGGLELIEQIASSRKFNADKCFSTPEMMRRIGKISKILRQRGL 311
           FA GA A+EA+AAGADIVG  +L+E I S  K   D+C +TP+MM  +G++ KIL  R L
Sbjct: 78  FARGAKADEAKAAGADIVGAEDLMETIQSG-KIEFDRCIATPDMMPLVGRLGKILGPRNL 137

Query: 312 LPDPKLGTVTSDIKGALKKAREGHMHFKMDSTSIVHVGLGKVSHSEEFLRENIGAFVNAL 371
           +P+PK+GTVT D+ GA+  A+ G + FK++   ++H G+GK+S   E L +N+ AFV+A+
Sbjct: 138 MPNPKVGTVTMDVAGAVGNAKGGEVQFKVEKAGVIHAGVGKISFDAEKLAQNVRAFVDAV 197

Query: 372 LLAKPVGLKKASKYAGYLNSFHICSTMGPGFPITIQS 407
             AKP G K       YL    + STMGPG  + + S
Sbjct: 198 NRAKPAGAK-----GTYLKKVSLSSTMGPGVSVDLAS 228

[Close]

BLAST of CsGy4G002040 vs. ExPASy Swiss-Prot
Match: A3PGI6 (50S ribosomal protein L1 OS=Rhodobacter sphaeroides (strain ATCC 17029 / ATH 2.4.9) OX=349101 GN=rplA1 PE=3 SV=1)

HSP 1 Score: 185.7 bits (470), Expect = 1.1e-45
Identity = 98/217 (45.16%), Postives = 139/217 (64.06%), Query Frame = 0


Query: 192 KVVLDLIDAIRQVKAAAKGNFDETVEAHARLGVDAR--KMQVLGNMTLPHSIGKTVKVAF 251
           K ++ + DA+  +K AA   FDET+E    LGVD R     V G +TLP+  GKTV+VA 
Sbjct: 18  KDLISVEDAVALIKQAASAKFDETLEVAMNLGVDPRHADQMVRGVVTLPNGTGKTVRVAV 77

Query: 252 FAEGADAEEARAAGADIVGGLELIEQIASSRKFNADKCFSTPEMMRRIGKISKILRQRGL 311
           FA GA A+EA+AAGADIVG  +L+E I S  K   D+C +TP+MM  +G++ KIL  R L
Sbjct: 78  FARGAKADEAKAAGADIVGAEDLMETIQSG-KIEFDRCIATPDMMPLVGRLGKILGPRNL 137

Query: 312 LPDPKLGTVTSDIKGALKKAREGHMHFKMDSTSIVHVGLGKVSHSEEFLRENIGAFVNAL 371
           +P+PK+GTVT D+K A++ A+ G + FK++   ++H G+GK+S   + L +N+ AFV+A+
Sbjct: 138 MPNPKVGTVTMDVKSAVEAAKGGEVQFKVEKAGVIHAGVGKMSFEADKLAQNVRAFVDAV 197

Query: 372 LLAKPVGLKKASKYAGYLNSFHICSTMGPGFPITIQS 407
             AKP G K       YL    + STMGPG  + + S
Sbjct: 198 NRAKPAGAK-----GTYLKKVSLSSTMGPGVSVDLTS 228

[Close]

BLAST of CsGy4G002040 vs. ExPASy Swiss-Prot
Match: Q3J5T3 (50S ribosomal protein L1 OS=Rhodobacter sphaeroides (strain ATCC 17023 / DSM 158 / JCM 6121 / NBRC 12203 / NCIMB 8253 / ATH 2.4.1.) OX=272943 GN=rplA PE=3 SV=1)

HSP 1 Score: 185.7 bits (470), Expect = 1.1e-45
Identity = 98/217 (45.16%), Postives = 139/217 (64.06%), Query Frame = 0


Query: 192 KVVLDLIDAIRQVKAAAKGNFDETVEAHARLGVDAR--KMQVLGNMTLPHSIGKTVKVAF 251
           K ++ + DA+  +K AA   FDET+E    LGVD R     V G +TLP+  GKTV+VA 
Sbjct: 18  KDLISVEDAVALIKQAASAKFDETLEVAMNLGVDPRHADQMVRGVVTLPNGTGKTVRVAV 77

Query: 252 FAEGADAEEARAAGADIVGGLELIEQIASSRKFNADKCFSTPEMMRRIGKISKILRQRGL 311
           FA GA A+EA+AAGADIVG  +L+E I S  K   D+C +TP+MM  +G++ KIL  R L
Sbjct: 78  FARGAKADEAKAAGADIVGAEDLMETIQSG-KIEFDRCIATPDMMPLVGRLGKILGPRNL 137

Query: 312 LPDPKLGTVTSDIKGALKKAREGHMHFKMDSTSIVHVGLGKVSHSEEFLRENIGAFVNAL 371
           +P+PK+GTVT D+K A++ A+ G + FK++   ++H G+GK+S   + L +N+ AFV+A+
Sbjct: 138 MPNPKVGTVTMDVKSAVEAAKGGEVQFKVEKAGVIHAGVGKMSFEADKLAQNVRAFVDAV 197

Query: 372 LLAKPVGLKKASKYAGYLNSFHICSTMGPGFPITIQS 407
             AKP G K       YL    + STMGPG  + + S
Sbjct: 198 NRAKPAGAK-----GTYLKKVSLSSTMGPGVSVDLTS 228

[Close]

BLAST of CsGy4G002040 vs. ExPASy Swiss-Prot
Match: B9KL80 (50S ribosomal protein L1 OS=Rhodobacter sphaeroides (strain KD131 / KCTC 12085) OX=557760 GN=rplA PE=3 SV=1)

HSP 1 Score: 185.7 bits (470), Expect = 1.1e-45
Identity = 98/217 (45.16%), Postives = 139/217 (64.06%), Query Frame = 0


Query: 192 KVVLDLIDAIRQVKAAAKGNFDETVEAHARLGVDAR--KMQVLGNMTLPHSIGKTVKVAF 251
           K ++ + DA+  +K AA   FDET+E    LGVD R     V G +TLP+  GKTV+VA 
Sbjct: 18  KDLISVEDAVALIKQAASAKFDETLEVAMNLGVDPRHADQMVRGVVTLPNGTGKTVRVAV 77

Query: 252 FAEGADAEEARAAGADIVGGLELIEQIASSRKFNADKCFSTPEMMRRIGKISKILRQRGL 311
           FA GA A+EA+AAGADIVG  +L+E I S  K   D+C +TP+MM  +G++ KIL  R L
Sbjct: 78  FARGAKADEAKAAGADIVGAEDLMETIQSG-KIEFDRCIATPDMMPLVGRLGKILGPRNL 137

Query: 312 LPDPKLGTVTSDIKGALKKAREGHMHFKMDSTSIVHVGLGKVSHSEEFLRENIGAFVNAL 371
           +P+PK+GTVT D+K A++ A+ G + FK++   ++H G+GK+S   + L +N+ AFV+A+
Sbjct: 138 MPNPKVGTVTMDVKSAVEAAKGGEVQFKVEKAGVIHAGVGKMSFEADKLAQNVRAFVDAV 197

Query: 372 LLAKPVGLKKASKYAGYLNSFHICSTMGPGFPITIQS 407
             AKP G K       YL    + STMGPG  + + S
Sbjct: 198 NRAKPAGAK-----GTYLKKVSLSSTMGPGVSVDLTS 228

[Close]

BLAST of CsGy4G002040 vs. ExPASy Swiss-Prot
Match: B9JDR8 (50S ribosomal protein L1 OS=Agrobacterium radiobacter (strain K84 / ATCC BAA-868) OX=311403 GN=rplA PE=3 SV=1)

HSP 1 Score: 183.7 bits (465), Expect = 4.3e-45
Identity = 97/214 (45.33%), Postives = 136/214 (63.55%), Query Frame = 0


Query: 197 LIDAIRQVKAAAKGNFDETVEAHARLGVDAR--KMQVLGNMTLPHSIGKTVKVAFFAEGA 256
           L  AI  VK  A   FDET+E    LGVD R     V G + LP+  G++V+VA FA GA
Sbjct: 21  LTQAIGMVKERAIAKFDETIEVSMNLGVDPRHADQMVRGVVNLPNGTGRSVRVAVFARGA 80

Query: 257 DAEEARAAGADIVGGLELIEQIASSRKFNADKCFSTPEMMRRIGKISKILRQRGLLPDPK 316
            A+EA+AAGADIVG  EL+E I    K + D+C +TP+MM  +G++ K+L  RG++P+PK
Sbjct: 81  KADEAKAAGADIVGAEELVE-IVQGGKIDFDRCIATPDMMPLVGRLGKVLGPRGMMPNPK 140

Query: 317 LGTVTSDIKGALKKAREGHMHFKMDSTSIVHVGLGKVSHSEEFLRENIGAFVNALLLAKP 376
           +GTVT D+KGA++ ++ G + F+++   IVH G+GK S   + L ENI AF +A++ AKP
Sbjct: 141 VGTVTMDVKGAVEASKGGAVEFRVEKAGIVHAGIGKASFDAKALEENIRAFADAVIKAKP 200

Query: 377 VGLKKASKYAGYLNSFHICSTMGPGFPITIQSLS 409
            G K       Y+    I STMGPG  I + S++
Sbjct: 201 AGAK-----GNYVKRVAISSTMGPGVKIELASVT 228

[Close]

BLAST of CsGy4G002040 vs. NCBI nr
Match: XP_004152169.1 (uncharacterized protein LOC101207134 [Cucumis sativus] >KGN52948.1 hypothetical protein Csa_014531 [Cucumis sativus])

HSP 1 Score: 813 bits (2099), Expect = 2.58e-296
Identity = 424/424 (100.00%), Postives = 424/424 (100.00%), Query Frame = 0


Query: 1   MAVLKLILTHARRHSFARPPSLSTSHFLHFRRSLSSSQSDSNPDPDSPPDQSSPRTSRSV 60
           MAVLKLILTHARRHSFARPPSLSTSHFLHFRRSLSSSQSDSNPDPDSPPDQSSPRTSRSV
Sbjct: 1   MAVLKLILTHARRHSFARPPSLSTSHFLHFRRSLSSSQSDSNPDPDSPPDQSSPRTSRSV 60

Query: 61  PIQPVSYAVKPKPQADENQDSPVTLQSPPPPQGPPPRPEGRRTWTREDVRYMKDAPTITP 120
           PIQPVSYAVKPKPQADENQDSPVTLQSPPPPQGPPPRPEGRRTWTREDVRYMKDAPTITP
Sbjct: 61  PIQPVSYAVKPKPQADENQDSPVTLQSPPPPQGPPPRPEGRRTWTREDVRYMKDAPTITP 120

Query: 121 VSYAARVAPLPEDTGSASGGGEEGVVTEQMEEERKKIEAANQWRRRVLRVAEEEKVTAPF 180
           VSYAARVAPLPEDTGSASGGGEEGVVTEQMEEERKKIEAANQWRRRVLRVAEEEKVTAPF
Sbjct: 121 VSYAARVAPLPEDTGSASGGGEEGVVTEQMEEERKKIEAANQWRRRVLRVAEEEKVTAPF 180

Query: 181 PMLIKVEKKEQKVVLDLIDAIRQVKAAAKGNFDETVEAHARLGVDARKMQVLGNMTLPHS 240
           PMLIKVEKKEQKVVLDLIDAIRQVKAAAKGNFDETVEAHARLGVDARKMQVLGNMTLPHS
Sbjct: 181 PMLIKVEKKEQKVVLDLIDAIRQVKAAAKGNFDETVEAHARLGVDARKMQVLGNMTLPHS 240

Query: 241 IGKTVKVAFFAEGADAEEARAAGADIVGGLELIEQIASSRKFNADKCFSTPEMMRRIGKI 300
           IGKTVKVAFFAEGADAEEARAAGADIVGGLELIEQIASSRKFNADKCFSTPEMMRRIGKI
Sbjct: 241 IGKTVKVAFFAEGADAEEARAAGADIVGGLELIEQIASSRKFNADKCFSTPEMMRRIGKI 300

Query: 301 SKILRQRGLLPDPKLGTVTSDIKGALKKAREGHMHFKMDSTSIVHVGLGKVSHSEEFLRE 360
           SKILRQRGLLPDPKLGTVTSDIKGALKKAREGHMHFKMDSTSIVHVGLGKVSHSEEFLRE
Sbjct: 301 SKILRQRGLLPDPKLGTVTSDIKGALKKAREGHMHFKMDSTSIVHVGLGKVSHSEEFLRE 360

Query: 361 NIGAFVNALLLAKPVGLKKASKYAGYLNSFHICSTMGPGFPITIQSLSKVADQYNRKYLS 420
           NIGAFVNALLLAKPVGLKKASKYAGYLNSFHICSTMGPGFPITIQSLSKVADQYNRKYLS
Sbjct: 361 NIGAFVNALLLAKPVGLKKASKYAGYLNSFHICSTMGPGFPITIQSLSKVADQYNRKYLS 420

Query: 421 GVVR 424
           GVVR
Sbjct: 421 GVVR 424

[Close]

BLAST of CsGy4G002040 vs. NCBI nr
Match: XP_008454163.1 (PREDICTED: 50S ribosomal protein L1 isoform X1 [Cucumis melo] >XP_008454164.1 PREDICTED: 50S ribosomal protein L1 isoform X1 [Cucumis melo])

HSP 1 Score: 769 bits (1985), Expect = 6.08e-279
Identity = 404/426 (94.84%), Postives = 413/426 (96.95%), Query Frame = 0


Query: 1   MAVLKLILTHARRHSFARPPSLSTSHFLHFRRSLSSSQSDSNPDPDSPPDQSSPRTSRSV 60
           MAVLKLILTHARRHSFA+PPSLST  FLHFRRSLSSSQSDSNPDP+SPPDQSSPRTSRSV
Sbjct: 1   MAVLKLILTHARRHSFAKPPSLSTPQFLHFRRSLSSSQSDSNPDPESPPDQSSPRTSRSV 60

Query: 61  PIQPVSYAVKPKPQADENQDSPVTLQSPPPPQGPPP--RPEGRRTWTREDVRYMKDAPTI 120
           PIQPVSYAVKPKP+ADENQDSP  LQSPPPPQGPPP  RPEGRRTWTREDVRYMKD+P+I
Sbjct: 61  PIQPVSYAVKPKPEADENQDSPEPLQSPPPPQGPPPPPRPEGRRTWTREDVRYMKDSPSI 120

Query: 121 TPVSYAARVAPLPEDTGSASGGGEEGVVTEQMEEERKKIEAANQWRRRVLRVAEEEKVTA 180
           TPVSYA RVAPLPEDTGS  GGGEEGVV+ QMEEERKKIEAANQWRRRVLRV EE+KVTA
Sbjct: 121 TPVSYATRVAPLPEDTGS--GGGEEGVVSGQMEEERKKIEAANQWRRRVLRVEEEDKVTA 180

Query: 181 PFPMLIKVEKKEQKVVLDLIDAIRQVKAAAKGNFDETVEAHARLGVDARKMQVLGNMTLP 240
           PFPMLIKVEKKEQKVVLDL DAIRQVKAAAKGNFDETVEAHARLGVDARKMQVLGNMTLP
Sbjct: 181 PFPMLIKVEKKEQKVVLDLTDAIRQVKAAAKGNFDETVEAHARLGVDARKMQVLGNMTLP 240

Query: 241 HSIGKTVKVAFFAEGADAEEARAAGADIVGGLELIEQIASSRKFNADKCFSTPEMMRRIG 300
           HSIGKTVKVAFFAEGADAEEARAAGADIVGG+ELIEQIASSRKFNADKCFSTPEMMRRIG
Sbjct: 241 HSIGKTVKVAFFAEGADAEEARAAGADIVGGVELIEQIASSRKFNADKCFSTPEMMRRIG 300

Query: 301 KISKILRQRGLLPDPKLGTVTSDIKGALKKAREGHMHFKMDSTSIVHVGLGKVSHSEEFL 360
           KISKILRQRGLLPDPKLGTVTSDIKGALKKAREGHMHFKMDSTSIVHVGLGKVSHSEEFL
Sbjct: 301 KISKILRQRGLLPDPKLGTVTSDIKGALKKAREGHMHFKMDSTSIVHVGLGKVSHSEEFL 360

Query: 361 RENIGAFVNALLLAKPVGLKKASKYAGYLNSFHICSTMGPGFPITIQSLSKVADQYNRKY 420
           RENIGAFVNALLLAKP GLKKASKYAGYLNSFHICSTMGPGFPITIQSLSKVADQYN+KY
Sbjct: 361 RENIGAFVNALLLAKPAGLKKASKYAGYLNSFHICSTMGPGFPITIQSLSKVADQYNKKY 420

Query: 421 LSGVVR 424
           LSGVVR
Sbjct: 421 LSGVVR 424

[Close]

BLAST of CsGy4G002040 vs. NCBI nr
Match: XP_016901449.1 (PREDICTED: 50S ribosomal protein L1 isoform X2 [Cucumis melo])

HSP 1 Score: 753 bits (1945), Expect = 7.27e-273
Identity = 396/418 (94.74%), Postives = 405/418 (96.89%), Query Frame = 0


Query: 1   MAVLKLILTHARRHSFARPPSLSTSHFLHFRRSLSSSQSDSNPDPDSPPDQSSPRTSRSV 60
           MAVLKLILTHARRHSFA+PPSLST  FLHFRRSLSSSQSDSNPDP+SPPDQSSPRTSRSV
Sbjct: 1   MAVLKLILTHARRHSFAKPPSLSTPQFLHFRRSLSSSQSDSNPDPESPPDQSSPRTSRSV 60

Query: 61  PIQPVSYAVKPKPQADENQDSPVTLQSPPPPQGPPP--RPEGRRTWTREDVRYMKDAPTI 120
           PIQPVSYAVKPKP+ADENQDSP  LQSPPPPQGPPP  RPEGRRTWTREDVRYMKD+P+I
Sbjct: 61  PIQPVSYAVKPKPEADENQDSPEPLQSPPPPQGPPPPPRPEGRRTWTREDVRYMKDSPSI 120

Query: 121 TPVSYAARVAPLPEDTGSASGGGEEGVVTEQMEEERKKIEAANQWRRRVLRVAEEEKVTA 180
           TPVSYA RVAPLPEDTGS  GGGEEGVV+ QMEEERKKIEAANQWRRRVLRV EE+KVTA
Sbjct: 121 TPVSYATRVAPLPEDTGS--GGGEEGVVSGQMEEERKKIEAANQWRRRVLRVEEEDKVTA 180

Query: 181 PFPMLIKVEKKEQKVVLDLIDAIRQVKAAAKGNFDETVEAHARLGVDARKMQVLGNMTLP 240
           PFPMLIKVEKKEQKVVLDL DAIRQVKAAAKGNFDETVEAHARLGVDARKMQVLGNMTLP
Sbjct: 181 PFPMLIKVEKKEQKVVLDLTDAIRQVKAAAKGNFDETVEAHARLGVDARKMQVLGNMTLP 240

Query: 241 HSIGKTVKVAFFAEGADAEEARAAGADIVGGLELIEQIASSRKFNADKCFSTPEMMRRIG 300
           HSIGKTVKVAFFAEGADAEEARAAGADIVGG+ELIEQIASSRKFNADKCFSTPEMMRRIG
Sbjct: 241 HSIGKTVKVAFFAEGADAEEARAAGADIVGGVELIEQIASSRKFNADKCFSTPEMMRRIG 300

Query: 301 KISKILRQRGLLPDPKLGTVTSDIKGALKKAREGHMHFKMDSTSIVHVGLGKVSHSEEFL 360
           KISKILRQRGLLPDPKLGTVTSDIKGALKKAREGHMHFKMDSTSIVHVGLGKVSHSEEFL
Sbjct: 301 KISKILRQRGLLPDPKLGTVTSDIKGALKKAREGHMHFKMDSTSIVHVGLGKVSHSEEFL 360

Query: 361 RENIGAFVNALLLAKPVGLKKASKYAGYLNSFHICSTMGPGFPITIQSLSKVADQYNR 416
           RENIGAFVNALLLAKP GLKKASKYAGYLNSFHICSTMGPGFPITIQSLSKVADQYN+
Sbjct: 361 RENIGAFVNALLLAKPAGLKKASKYAGYLNSFHICSTMGPGFPITIQSLSKVADQYNK 416

[Close]

BLAST of CsGy4G002040 vs. NCBI nr
Match: XP_038877977.1 (50S ribosomal protein L1 [Benincasa hispida] >XP_038877978.1 50S ribosomal protein L1 [Benincasa hispida])

HSP 1 Score: 702 bits (1812), Expect = 1.32e-252
Identity = 370/424 (87.26%), Postives = 388/424 (91.51%), Query Frame = 0


Query: 1   MAVLKLILTHARRHSFARPPSLSTSHFLHFRRSLSSSQSDSNPDPDSPPDQSSPRTSRSV 60
           MAV KLILT +RRH  A+PPSLST  FL FRR LSSSQS+SNPDPDSP +QSSPRT RSV
Sbjct: 1   MAVFKLILTQSRRHRLAKPPSLSTPQFLQFRRPLSSSQSESNPDPDSPHNQSSPRTPRSV 60

Query: 61  PIQPVSYAVKPKPQADENQDSPVTLQSPPPPQGPPPRPEGRRTWTREDVRYMKDAPTITP 120
           PIQPVSYAVKPKPQ+DENQDSP +LQSPP    PPP P GRRTWTRED+RYMKD P+I  
Sbjct: 61  PIQPVSYAVKPKPQSDENQDSPESLQSPPATPRPPPSPAGRRTWTREDIRYMKDNPSIAS 120

Query: 121 VSYAARVAPLPEDTGSASGGGEEGVVTEQMEEERKKIEAANQWRRRVLRVAEEEKVTAPF 180
           VSY  RVAPLPED  SASGGGEEGV + QMEEERK+IEA NQWRR   RV EEEKVTAPF
Sbjct: 121 VSYPLRVAPLPEDRVSASGGGEEGVESGQMEEERKRIEAENQWRRS-FRVLEEEKVTAPF 180

Query: 181 PMLIKVEKKEQKVVLDLIDAIRQVKAAAKGNFDETVEAHARLGVDARKMQVLGNMTLPHS 240
           PMLIKVEKKEQKVVL+L+DAIRQVKA AKGNFDETVEAHARLGVDARKMQVLGNMTLPHS
Sbjct: 181 PMLIKVEKKEQKVVLELMDAIRQVKANAKGNFDETVEAHARLGVDARKMQVLGNMTLPHS 240

Query: 241 IGKTVKVAFFAEGADAEEARAAGADIVGGLELIEQIASSRKFNADKCFSTPEMMRRIGKI 300
           IGKTV+VAFFAEGADAEEARAAGADIVGG+ELIE+IA+SRKFN DKCFSTPEMMRRIGKI
Sbjct: 241 IGKTVRVAFFAEGADAEEARAAGADIVGGVELIEEIATSRKFNVDKCFSTPEMMRRIGKI 300

Query: 301 SKILRQRGLLPDPKLGTVTSDIKGALKKAREGHMHFKMDSTSIVHVGLGKVSHSEEFLRE 360
           SKILRQRGLLPDPKLGTVT DIKGALKKAREGHMHFKMDSTSIVHVGLGKVSHSEE LRE
Sbjct: 301 SKILRQRGLLPDPKLGTVTGDIKGALKKAREGHMHFKMDSTSIVHVGLGKVSHSEESLRE 360

Query: 361 NIGAFVNALLLAKPVGLKKASKYAGYLNSFHICSTMGPGFPITIQSLSKVADQYNRKYLS 420
           NIGAFVNALLLAKP GLKKASKYAGY+NSFHICSTMGPGFPITIQSLSKVADQYNRKYLS
Sbjct: 361 NIGAFVNALLLAKPAGLKKASKYAGYVNSFHICSTMGPGFPITIQSLSKVADQYNRKYLS 420

Query: 421 GVVR 424
           GV+R
Sbjct: 421 GVIR 423

[Close]

BLAST of CsGy4G002040 vs. NCBI nr
Match: KAG6581968.1 (hypothetical protein SDJN03_21970, partial [Cucurbita argyrosperma subsp. sororia] >KAG7018387.1 rplA [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 696 bits (1795), Expect = 5.12e-250
Identity = 361/424 (85.14%), Postives = 390/424 (91.98%), Query Frame = 0


Query: 1   MAVLKLILTHARRHSFARPPSLSTSHFLHFRRSLSSSQSDSNPDPDSPPDQSSPRTSRSV 60
           MA+ KLILT +RRH  A+ PSLST  FL FRRSLSSSQS+SNPDPDSPP++SS RT RS 
Sbjct: 1   MAMFKLILTQSRRHCLAKSPSLSTPQFLQFRRSLSSSQSESNPDPDSPPNESS-RTPRSA 60

Query: 61  PIQPVSYAVKPKPQADENQDSPVTLQSPPPPQGPPPRPEGRRTWTREDVRYMKDAPTITP 120
           PIQPVSYA+KPKPQ+D++ DSP + Q P  P+ PPP PEGRRTWTRED+RYMKD PTI P
Sbjct: 61  PIQPVSYAIKPKPQSDQDHDSPESPQPPSAPRRPPPSPEGRRTWTREDIRYMKDTPTIAP 120

Query: 121 VSYAARVAPLPEDTGSASGGGEEGVVTEQMEEERKKIEAANQWRRRVLRVAEEEKVTAPF 180
           VSY +RVAPLPED  SASGGGEEGV +EQMEEERKKIEA   WRRRV RVAEE+KVTAPF
Sbjct: 121 VSYPSRVAPLPEDRVSASGGGEEGVESEQMEEERKKIEAEKMWRRRVFRVAEEDKVTAPF 180

Query: 181 PMLIKVEKKEQKVVLDLIDAIRQVKAAAKGNFDETVEAHARLGVDARKMQVLGNMTLPHS 240
           PM+IKV+KKE KVVLDL+DAIRQVKA++K  FDETVEAHARLGVDARKMQVLGNMTLPHS
Sbjct: 181 PMVIKVDKKEPKVVLDLMDAIRQVKASSKSTFDETVEAHARLGVDARKMQVLGNMTLPHS 240

Query: 241 IGKTVKVAFFAEGADAEEARAAGADIVGGLELIEQIASSRKFNADKCFSTPEMMRRIGKI 300
           IGKTVKVAFFAEGADAEEARAAGADIVGG+ELIE+IA+SRKFN DKCFSTPEMMRRIGKI
Sbjct: 241 IGKTVKVAFFAEGADAEEARAAGADIVGGVELIEEIATSRKFNVDKCFSTPEMMRRIGKI 300

Query: 301 SKILRQRGLLPDPKLGTVTSDIKGALKKAREGHMHFKMDSTSIVHVGLGKVSHSEEFLRE 360
           SKILRQRGLLPDPKLGTVTSDIKGALKKAREGHMHFKMDSTSIVHVGLGKVSHSEE LRE
Sbjct: 301 SKILRQRGLLPDPKLGTVTSDIKGALKKAREGHMHFKMDSTSIVHVGLGKVSHSEESLRE 360

Query: 361 NIGAFVNALLLAKPVGLKKASKYAGYLNSFHICSTMGPGFPITIQSLSKVADQYNRKYLS 420
           NIGAFVNALLLAKPVGLKKASKYAGY+NSFHICSTMGPGFP+TIQSLSKVADQYN+K+LS
Sbjct: 361 NIGAFVNALLLAKPVGLKKASKYAGYVNSFHICSTMGPGFPVTIQSLSKVADQYNKKFLS 420

Query: 421 GVVR 424
           GV+R
Sbjct: 421 GVIR 423

[Close]

BLAST of CsGy4G002040 vs. ExPASy TrEMBL
Match: A0A0A0KTS4 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G007040 PE=4 SV=1)

HSP 1 Score: 813 bits (2099), Expect = 1.25e-296
Identity = 424/424 (100.00%), Postives = 424/424 (100.00%), Query Frame = 0


Query: 1   MAVLKLILTHARRHSFARPPSLSTSHFLHFRRSLSSSQSDSNPDPDSPPDQSSPRTSRSV 60
           MAVLKLILTHARRHSFARPPSLSTSHFLHFRRSLSSSQSDSNPDPDSPPDQSSPRTSRSV
Sbjct: 1   MAVLKLILTHARRHSFARPPSLSTSHFLHFRRSLSSSQSDSNPDPDSPPDQSSPRTSRSV 60

Query: 61  PIQPVSYAVKPKPQADENQDSPVTLQSPPPPQGPPPRPEGRRTWTREDVRYMKDAPTITP 120
           PIQPVSYAVKPKPQADENQDSPVTLQSPPPPQGPPPRPEGRRTWTREDVRYMKDAPTITP
Sbjct: 61  PIQPVSYAVKPKPQADENQDSPVTLQSPPPPQGPPPRPEGRRTWTREDVRYMKDAPTITP 120

Query: 121 VSYAARVAPLPEDTGSASGGGEEGVVTEQMEEERKKIEAANQWRRRVLRVAEEEKVTAPF 180
           VSYAARVAPLPEDTGSASGGGEEGVVTEQMEEERKKIEAANQWRRRVLRVAEEEKVTAPF
Sbjct: 121 VSYAARVAPLPEDTGSASGGGEEGVVTEQMEEERKKIEAANQWRRRVLRVAEEEKVTAPF 180

Query: 181 PMLIKVEKKEQKVVLDLIDAIRQVKAAAKGNFDETVEAHARLGVDARKMQVLGNMTLPHS 240
           PMLIKVEKKEQKVVLDLIDAIRQVKAAAKGNFDETVEAHARLGVDARKMQVLGNMTLPHS
Sbjct: 181 PMLIKVEKKEQKVVLDLIDAIRQVKAAAKGNFDETVEAHARLGVDARKMQVLGNMTLPHS 240

Query: 241 IGKTVKVAFFAEGADAEEARAAGADIVGGLELIEQIASSRKFNADKCFSTPEMMRRIGKI 300
           IGKTVKVAFFAEGADAEEARAAGADIVGGLELIEQIASSRKFNADKCFSTPEMMRRIGKI
Sbjct: 241 IGKTVKVAFFAEGADAEEARAAGADIVGGLELIEQIASSRKFNADKCFSTPEMMRRIGKI 300

Query: 301 SKILRQRGLLPDPKLGTVTSDIKGALKKAREGHMHFKMDSTSIVHVGLGKVSHSEEFLRE 360
           SKILRQRGLLPDPKLGTVTSDIKGALKKAREGHMHFKMDSTSIVHVGLGKVSHSEEFLRE
Sbjct: 301 SKILRQRGLLPDPKLGTVTSDIKGALKKAREGHMHFKMDSTSIVHVGLGKVSHSEEFLRE 360

Query: 361 NIGAFVNALLLAKPVGLKKASKYAGYLNSFHICSTMGPGFPITIQSLSKVADQYNRKYLS 420
           NIGAFVNALLLAKPVGLKKASKYAGYLNSFHICSTMGPGFPITIQSLSKVADQYNRKYLS
Sbjct: 361 NIGAFVNALLLAKPVGLKKASKYAGYLNSFHICSTMGPGFPITIQSLSKVADQYNRKYLS 420

Query: 421 GVVR 424
           GVVR
Sbjct: 421 GVVR 424

[Close]

BLAST of CsGy4G002040 vs. ExPASy TrEMBL
Match: A0A1S3BZ70 (50S ribosomal protein L1 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103494649 PE=4 SV=1)

HSP 1 Score: 769 bits (1985), Expect = 2.94e-279
Identity = 404/426 (94.84%), Postives = 413/426 (96.95%), Query Frame = 0


Query: 1   MAVLKLILTHARRHSFARPPSLSTSHFLHFRRSLSSSQSDSNPDPDSPPDQSSPRTSRSV 60
           MAVLKLILTHARRHSFA+PPSLST  FLHFRRSLSSSQSDSNPDP+SPPDQSSPRTSRSV
Sbjct: 1   MAVLKLILTHARRHSFAKPPSLSTPQFLHFRRSLSSSQSDSNPDPESPPDQSSPRTSRSV 60

Query: 61  PIQPVSYAVKPKPQADENQDSPVTLQSPPPPQGPPP--RPEGRRTWTREDVRYMKDAPTI 120
           PIQPVSYAVKPKP+ADENQDSP  LQSPPPPQGPPP  RPEGRRTWTREDVRYMKD+P+I
Sbjct: 61  PIQPVSYAVKPKPEADENQDSPEPLQSPPPPQGPPPPPRPEGRRTWTREDVRYMKDSPSI 120

Query: 121 TPVSYAARVAPLPEDTGSASGGGEEGVVTEQMEEERKKIEAANQWRRRVLRVAEEEKVTA 180
           TPVSYA RVAPLPEDTGS  GGGEEGVV+ QMEEERKKIEAANQWRRRVLRV EE+KVTA
Sbjct: 121 TPVSYATRVAPLPEDTGS--GGGEEGVVSGQMEEERKKIEAANQWRRRVLRVEEEDKVTA 180

Query: 181 PFPMLIKVEKKEQKVVLDLIDAIRQVKAAAKGNFDETVEAHARLGVDARKMQVLGNMTLP 240
           PFPMLIKVEKKEQKVVLDL DAIRQVKAAAKGNFDETVEAHARLGVDARKMQVLGNMTLP
Sbjct: 181 PFPMLIKVEKKEQKVVLDLTDAIRQVKAAAKGNFDETVEAHARLGVDARKMQVLGNMTLP 240

Query: 241 HSIGKTVKVAFFAEGADAEEARAAGADIVGGLELIEQIASSRKFNADKCFSTPEMMRRIG 300
           HSIGKTVKVAFFAEGADAEEARAAGADIVGG+ELIEQIASSRKFNADKCFSTPEMMRRIG
Sbjct: 241 HSIGKTVKVAFFAEGADAEEARAAGADIVGGVELIEQIASSRKFNADKCFSTPEMMRRIG 300

Query: 301 KISKILRQRGLLPDPKLGTVTSDIKGALKKAREGHMHFKMDSTSIVHVGLGKVSHSEEFL 360
           KISKILRQRGLLPDPKLGTVTSDIKGALKKAREGHMHFKMDSTSIVHVGLGKVSHSEEFL
Sbjct: 301 KISKILRQRGLLPDPKLGTVTSDIKGALKKAREGHMHFKMDSTSIVHVGLGKVSHSEEFL 360

Query: 361 RENIGAFVNALLLAKPVGLKKASKYAGYLNSFHICSTMGPGFPITIQSLSKVADQYNRKY 420
           RENIGAFVNALLLAKP GLKKASKYAGYLNSFHICSTMGPGFPITIQSLSKVADQYN+KY
Sbjct: 361 RENIGAFVNALLLAKPAGLKKASKYAGYLNSFHICSTMGPGFPITIQSLSKVADQYNKKY 420

Query: 421 LSGVVR 424
           LSGVVR
Sbjct: 421 LSGVVR 424

[Close]

BLAST of CsGy4G002040 vs. ExPASy TrEMBL
Match: A0A1S4DZR3 (50S ribosomal protein L1 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103494649 PE=4 SV=1)

HSP 1 Score: 753 bits (1945), Expect = 3.52e-273
Identity = 396/418 (94.74%), Postives = 405/418 (96.89%), Query Frame = 0


Query: 1   MAVLKLILTHARRHSFARPPSLSTSHFLHFRRSLSSSQSDSNPDPDSPPDQSSPRTSRSV 60
           MAVLKLILTHARRHSFA+PPSLST  FLHFRRSLSSSQSDSNPDP+SPPDQSSPRTSRSV
Sbjct: 1   MAVLKLILTHARRHSFAKPPSLSTPQFLHFRRSLSSSQSDSNPDPESPPDQSSPRTSRSV 60

Query: 61  PIQPVSYAVKPKPQADENQDSPVTLQSPPPPQGPPP--RPEGRRTWTREDVRYMKDAPTI 120
           PIQPVSYAVKPKP+ADENQDSP  LQSPPPPQGPPP  RPEGRRTWTREDVRYMKD+P+I
Sbjct: 61  PIQPVSYAVKPKPEADENQDSPEPLQSPPPPQGPPPPPRPEGRRTWTREDVRYMKDSPSI 120

Query: 121 TPVSYAARVAPLPEDTGSASGGGEEGVVTEQMEEERKKIEAANQWRRRVLRVAEEEKVTA 180
           TPVSYA RVAPLPEDTGS  GGGEEGVV+ QMEEERKKIEAANQWRRRVLRV EE+KVTA
Sbjct: 121 TPVSYATRVAPLPEDTGS--GGGEEGVVSGQMEEERKKIEAANQWRRRVLRVEEEDKVTA 180

Query: 181 PFPMLIKVEKKEQKVVLDLIDAIRQVKAAAKGNFDETVEAHARLGVDARKMQVLGNMTLP 240
           PFPMLIKVEKKEQKVVLDL DAIRQVKAAAKGNFDETVEAHARLGVDARKMQVLGNMTLP
Sbjct: 181 PFPMLIKVEKKEQKVVLDLTDAIRQVKAAAKGNFDETVEAHARLGVDARKMQVLGNMTLP 240

Query: 241 HSIGKTVKVAFFAEGADAEEARAAGADIVGGLELIEQIASSRKFNADKCFSTPEMMRRIG 300
           HSIGKTVKVAFFAEGADAEEARAAGADIVGG+ELIEQIASSRKFNADKCFSTPEMMRRIG
Sbjct: 241 HSIGKTVKVAFFAEGADAEEARAAGADIVGGVELIEQIASSRKFNADKCFSTPEMMRRIG 300

Query: 301 KISKILRQRGLLPDPKLGTVTSDIKGALKKAREGHMHFKMDSTSIVHVGLGKVSHSEEFL 360
           KISKILRQRGLLPDPKLGTVTSDIKGALKKAREGHMHFKMDSTSIVHVGLGKVSHSEEFL
Sbjct: 301 KISKILRQRGLLPDPKLGTVTSDIKGALKKAREGHMHFKMDSTSIVHVGLGKVSHSEEFL 360

Query: 361 RENIGAFVNALLLAKPVGLKKASKYAGYLNSFHICSTMGPGFPITIQSLSKVADQYNR 416
           RENIGAFVNALLLAKP GLKKASKYAGYLNSFHICSTMGPGFPITIQSLSKVADQYN+
Sbjct: 361 RENIGAFVNALLLAKPAGLKKASKYAGYLNSFHICSTMGPGFPITIQSLSKVADQYNK 416

[Close]

BLAST of CsGy4G002040 vs. ExPASy TrEMBL
Match: A0A6J1GVQ7 (uncharacterized protein LOC111457596 OS=Cucurbita moschata OX=3662 GN=LOC111457596 PE=4 SV=1)

HSP 1 Score: 695 bits (1794), Expect = 3.52e-250
Identity = 360/424 (84.91%), Postives = 390/424 (91.98%), Query Frame = 0


Query: 1   MAVLKLILTHARRHSFARPPSLSTSHFLHFRRSLSSSQSDSNPDPDSPPDQSSPRTSRSV 60
           MA+ KLILT +RRH  A+ PSLST  FL FRRSLSSSQS+SNPDPDSPP++SS RT RS 
Sbjct: 1   MAMFKLILTQSRRHCLAKSPSLSTPQFLQFRRSLSSSQSESNPDPDSPPNESS-RTPRSA 60

Query: 61  PIQPVSYAVKPKPQADENQDSPVTLQSPPPPQGPPPRPEGRRTWTREDVRYMKDAPTITP 120
           PIQPVSYA+KPKPQ+D++ DSP + Q P  P+ PPP PEGRRTWTRED+RYMKD PTI P
Sbjct: 61  PIQPVSYAIKPKPQSDQDHDSPESPQPPSAPRRPPPSPEGRRTWTREDIRYMKDTPTIAP 120

Query: 121 VSYAARVAPLPEDTGSASGGGEEGVVTEQMEEERKKIEAANQWRRRVLRVAEEEKVTAPF 180
           VSY +RVAPLPED  SASGGGEEGV +EQMEEERKKIEA   WRRRV RVAEE+KVTAPF
Sbjct: 121 VSYPSRVAPLPEDRVSASGGGEEGVESEQMEEERKKIEAEKMWRRRVFRVAEEDKVTAPF 180

Query: 181 PMLIKVEKKEQKVVLDLIDAIRQVKAAAKGNFDETVEAHARLGVDARKMQVLGNMTLPHS 240
           PM+IKV+KKE KVVLDL+DAIRQVKA++K  FDETVEAHARLGVDARKMQVLGNMTLPHS
Sbjct: 181 PMVIKVDKKEPKVVLDLMDAIRQVKASSKSTFDETVEAHARLGVDARKMQVLGNMTLPHS 240

Query: 241 IGKTVKVAFFAEGADAEEARAAGADIVGGLELIEQIASSRKFNADKCFSTPEMMRRIGKI 300
           IGKTVKVAFFAEGADAEEARAAGADIVGG+ELIE+IA+SRKFN DKCFSTPEMMRRIGKI
Sbjct: 241 IGKTVKVAFFAEGADAEEARAAGADIVGGVELIEEIATSRKFNVDKCFSTPEMMRRIGKI 300

Query: 301 SKILRQRGLLPDPKLGTVTSDIKGALKKAREGHMHFKMDSTSIVHVGLGKVSHSEEFLRE 360
           SKILRQRGLLPDPKLGTVTSDIKGALKKAREGHMHFKMDSTSIVHVGLGKVSHSEE LRE
Sbjct: 301 SKILRQRGLLPDPKLGTVTSDIKGALKKAREGHMHFKMDSTSIVHVGLGKVSHSEESLRE 360

Query: 361 NIGAFVNALLLAKPVGLKKASKYAGYLNSFHICSTMGPGFPITIQSLSKVADQYNRKYLS 420
           N+GAFVNALLLAKPVGLKKASKYAGY+NSFHICSTMGPGFP+TIQSLSKVADQYN+K+LS
Sbjct: 361 NVGAFVNALLLAKPVGLKKASKYAGYVNSFHICSTMGPGFPVTIQSLSKVADQYNKKFLS 420

Query: 421 GVVR 424
           GV+R
Sbjct: 421 GVIR 423

[Close]

BLAST of CsGy4G002040 vs. ExPASy TrEMBL
Match: A0A6J1ISN8 (uncharacterized protein LOC111479599 OS=Cucurbita maxima OX=3661 GN=LOC111479599 PE=4 SV=1)

HSP 1 Score: 686 bits (1771), Expect = 1.12e-246
Identity = 355/424 (83.73%), Postives = 389/424 (91.75%), Query Frame = 0


Query: 1   MAVLKLILTHARRHSFARPPSLSTSHFLHFRRSLSSSQSDSNPDPDSPPDQSSPRTSRSV 60
           MA+ KLILT +RRH  A+ PSLST  FL FRRSLSSSQS+SNPDPDSPP++SS RT RSV
Sbjct: 1   MAMFKLILTQSRRHCLAKSPSLSTPQFLQFRRSLSSSQSESNPDPDSPPNESS-RTPRSV 60

Query: 61  PIQPVSYAVKPKPQADENQDSPVTLQSPPPPQGPPPRPEGRRTWTREDVRYMKDAPTITP 120
           PIQPVSYA+KPKPQ+D+++DSP + Q P  P+ PPP  EGR TWTRED+RYMKD P+I P
Sbjct: 61  PIQPVSYAIKPKPQSDQDRDSPESPQPPSAPRRPPPSSEGRTTWTREDIRYMKDTPSIAP 120

Query: 121 VSYAARVAPLPEDTGSASGGGEEGVVTEQMEEERKKIEAANQWRRRVLRVAEEEKVTAPF 180
           VSY +RVAPLPED  SASGGGEEGV +EQMEEERKKIEA   WRRRV RVAEE+KVTAPF
Sbjct: 121 VSYPSRVAPLPEDRVSASGGGEEGVESEQMEEERKKIEAEKMWRRRVFRVAEEDKVTAPF 180

Query: 181 PMLIKVEKKEQKVVLDLIDAIRQVKAAAKGNFDETVEAHARLGVDARKMQVLGNMTLPHS 240
           PM+IKV+KKE KVVLDL+DAIRQVKA++K  FDETVEAHARLGVDARKMQVLGNMTLPHS
Sbjct: 181 PMVIKVDKKEPKVVLDLMDAIRQVKASSKSTFDETVEAHARLGVDARKMQVLGNMTLPHS 240

Query: 241 IGKTVKVAFFAEGADAEEARAAGADIVGGLELIEQIASSRKFNADKCFSTPEMMRRIGKI 300
           IGKTVKVAFFA+GADAEEARAAGADIVGG+ELI++IA+SRKFN DKCFSTPEMMRRIGKI
Sbjct: 241 IGKTVKVAFFADGADAEEARAAGADIVGGVELIQEIATSRKFNVDKCFSTPEMMRRIGKI 300

Query: 301 SKILRQRGLLPDPKLGTVTSDIKGALKKAREGHMHFKMDSTSIVHVGLGKVSHSEEFLRE 360
           SKILRQRGLLPDPKLGTVTSDIKGALKKAREGHMHFKMDSTSIVHVGLGKVSHSE+ LRE
Sbjct: 301 SKILRQRGLLPDPKLGTVTSDIKGALKKAREGHMHFKMDSTSIVHVGLGKVSHSEDLLRE 360

Query: 361 NIGAFVNALLLAKPVGLKKASKYAGYLNSFHICSTMGPGFPITIQSLSKVADQYNRKYLS 420
           NIGAFVNALLLAKP GLKKASKYAGY+NSFHICSTMGPGFP+TIQSLSKVADQYN+K+LS
Sbjct: 361 NIGAFVNALLLAKPAGLKKASKYAGYVNSFHICSTMGPGFPVTIQSLSKVADQYNKKFLS 420

Query: 421 GVVR 424
           GV+R
Sbjct: 421 GVIR 423

[Close]

BLAST of CsGy4G002040 vs. TAIR 10
Match: AT2G42710.1 (Ribosomal protein L1p/L10e family )

HSP 1 Score: 397.5 bits (1020), Expect = 1.3e-110
Identity = 228/434 (52.53%), Postives = 295/434 (67.97%), Query Frame = 0


Query: 1   MAVLKLILTHARRHSFARP--------PSLSTSHFLHFRRSLSSSQSDSNPDPDSPPDQS 60
           MA +KL+L+ ARR    +P        P L +S       S SSS SDSNP PD     S
Sbjct: 1   MAAMKLLLSQARRQGLIKPFSSPFQQIPRLFSSS--SSSSSSSSSSSDSNPSPD-----S 60

Query: 61  SPRTSRSVPIQPVSYAVKPKPQADE--NQDSPVTLQSPPPPQGPPPRPEGRRTWTREDVR 120
           +    ++V I+PVSYA KPK Q  E  N +S   LQSP               WTRE++R
Sbjct: 61  NESRKKAVTIEPVSYAAKPKDQKSEPKNVESTENLQSPE-----------SANWTREEIR 120

Query: 121 YMKDAPTITPVSYAARVAPLPEDTGSASGGGEEGVVTEQMEEERKKIEAANQWRRRVLR- 180
           Y+KD+P+I PVSYA RVAPLPED    +G  E     E+ME ERK+IE  N+ RRR LR 
Sbjct: 121 YVKDSPSINPVSYAQRVAPLPED--RVAGENEGDRTPEEMERERKRIELENRARRRFLRA 180

Query: 181 -VAEEEKVTAPFPMLIKVEKKE-QKVVLDLIDAIRQVKAAAKGNFDETVEAHARLGVDAR 240
              EE+  + P P L+K E K  +K + DL++AIR++K  AK  FDET+EAH RLG++  
Sbjct: 181 NAVEEDTSSLPLPTLLKPELKHGKKPIFDLMEAIREIKGNAKAKFDETLEAHVRLGIEKG 240

Query: 241 KMQVL--GNMTLPHSIGKTVKVAFFAEGADAEEARAAGADIVGGLELIEQIASSRKFNAD 300
           + +++  G + LPHS+ K VKVAFFAEGADAE+A+AAGAD+VGGLELIE+I  S K + D
Sbjct: 241 RSELIVRGTLALPHSVKKDVKVAFFAEGADAEDAKAAGADVVGGLELIEEILKSGKIDFD 300

Query: 301 KCFSTPEMMRRIGKISKILRQRGLLPDPKLGTVTSDIKGALKKAREGHMHFKMDSTSIVH 360
           +C +TP+MM R+ KIS+IL   GL+P+PK G+VT D+  A+K A+ GH  F+MD TSI+H
Sbjct: 301 RCLATPKMMPRVYKISRILNNHGLMPNPKQGSVTKDVTKAVKDAKAGHTKFRMDKTSILH 360

Query: 361 VGLGKVSHSEEFLRENIGAFVNALLLAKPVGLKKASKYAGYLNSFHICSTMGPGFPITIQ 420
           V LGK+S SEE LREN+GAF+NALLLAKP GLKK SKYAGY+N+FH+CSTMG G+P++IQ
Sbjct: 361 VPLGKMSFSEEALRENVGAFMNALLLAKPAGLKKTSKYAGYVNAFHLCSTMGKGYPVSIQ 414

[Close]

BLAST of CsGy4G002040 vs. TAIR 10
Match: AT3G63490.1 (Ribosomal protein L1p/L10e family )

HSP 1 Score: 154.5 bits (389), Expect = 2.0e-37
Identity = 91/227 (40.09%), Postives = 136/227 (59.91%), Query Frame = 0


Query: 184 IKVEK-KEQKVVLDLIDAIRQVKAAAKGNFDETVEAHARLGVDAR--KMQVLGNMTLPHS 243
           ++++K +E K   D+  AI  +K  A   F E+VEAH RL +D +    Q+   ++LP  
Sbjct: 117 LEIQKLRETKKEYDVNTAISLLKQTANTRFVESVEAHFRLNIDPKYNDQQLRATVSLPKG 176

Query: 244 IGKTVKVAFFAEGADAEEARAAGADIVGGLELIEQIASSRKFNADKCFSTPEMMRRIGKI 303
            G+TV VA  A+G   +EA++AGADIVG  +LIEQI        DK  ++P+MM ++  +
Sbjct: 177 TGQTVIVAVLAQGEKVDEAKSAGADIVGSDDLIEQIKGG-FMEFDKLIASPDMMVKVAGL 236

Query: 304 SKILRQRGLLPDPKLGTVTSDIKGALKKAREGHMHFKMDSTSIVHVGLGKVSHSEEFLRE 363
            KIL  RGL+P+PK GTVT++I  A+++ ++G + F+ D T IVH+  GKV+ +EE L  
Sbjct: 237 GKILGPRGLMPNPKAGTVTANIPQAIEEFKKGKVEFRADKTGIVHIPFGKVNFTEEDLLI 296

Query: 364 NIGAFVNALLLAKPVGLKKASKYAGYLNSFHICSTMGPGFPITIQSL 408
           N  A V ++   KP G K       Y  S HICS+MGP   + I+ +
Sbjct: 297 NFLAAVKSVETNKPKGAKGV-----YWKSAHICSSMGPSIKLNIREM 337

[Close]

BLAST of CsGy4G002040 vs. TAIR 10
Match: AT3G63490.2 (Ribosomal protein L1p/L10e family )

HSP 1 Score: 104.8 bits (260), Expect = 1.8e-22
Identity = 65/171 (38.01%), Postives = 101/171 (59.06%), Query Frame = 0


Query: 184 IKVEK-KEQKVVLDLIDAIRQVKAAAKGNFDETVEAHARLGVDAR--KMQVLGNMTLPHS 243
           ++++K +E K   D+  AI  +K  A   F E+VEAH RL +D +    Q+   ++LP  
Sbjct: 117 LEIQKLRETKKEYDVNTAISLLKQTANTRFVESVEAHFRLNIDPKYNDQQLRATVSLPKG 176

Query: 244 IGKTVKVAFFAEGADAEEARAAGADIVGGLELIEQIASSRKFNADKCFSTPEMMRRIGKI 303
            G+TV VA  A+G   +EA++AGADIVG  +LIEQI        DK  ++P+MM ++  +
Sbjct: 177 TGQTVIVAVLAQGEKVDEAKSAGADIVGSDDLIEQIKGG-FMEFDKLIASPDMMVKVAGL 236

Query: 304 SKILRQRGLLPDPKLGTVTSDIKGALKKAREGHMHFKMDSTSIVHVGLGKV 352
            KIL  RGL+P+PK GTVT++I    + +R G ++ +     +    LGK+
Sbjct: 237 GKILGPRGLMPNPKAGTVTANIP---QSSRRGKLNSEQTKLGLFTFHLGKL 283

The following BLAST results are available for this feature:

BLAST of CsGy4G002040 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
A4WVL9	5.0e-46	45.62	50S ribosomal protein L1 OS=Rhodobacter sphaeroides (strain ATCC 17025 / ATH 2.4...	[more]
A3PGI6	1.1e-45	45.16	50S ribosomal protein L1 OS=Rhodobacter sphaeroides (strain ATCC 17029 / ATH 2.4...	[more]
Q3J5T3	1.1e-45	45.16	50S ribosomal protein L1 OS=Rhodobacter sphaeroides (strain ATCC 17023 / DSM 158...	[more]
B9KL80	1.1e-45	45.16	50S ribosomal protein L1 OS=Rhodobacter sphaeroides (strain KD131 / KCTC 12085) ...	[more]
B9JDR8	4.3e-45	45.33	50S ribosomal protein L1 OS=Agrobacterium radiobacter (strain K84 / ATCC BAA-868...	[more]

BLAST of CsGy4G002040 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004152169.1	2.58e-296	100.00	uncharacterized protein LOC101207134 [Cucumis sativus] >KGN52948.1 hypothetical ...	[more]
XP_008454163.1	6.08e-279	94.84	PREDICTED: 50S ribosomal protein L1 isoform X1 [Cucumis melo] >XP_008454164.1 PR...	[more]
XP_016901449.1	7.27e-273	94.74	PREDICTED: 50S ribosomal protein L1 isoform X2 [Cucumis melo]	[more]
XP_038877977.1	1.32e-252	87.26	50S ribosomal protein L1 [Benincasa hispida] >XP_038877978.1 50S ribosomal prote...	[more]
KAG6581968.1	5.12e-250	85.14	hypothetical protein SDJN03_21970, partial [Cucurbita argyrosperma subsp. sorori...	[more]

BLAST of CsGy4G002040 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KTS4	1.25e-296	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G007040 PE=4 SV=1	[more]
A0A1S3BZ70	2.94e-279	94.84	50S ribosomal protein L1 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103494649 PE=4...	[more]
A0A1S4DZR3	3.52e-273	94.74	50S ribosomal protein L1 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103494649 PE=4...	[more]
A0A6J1GVQ7	3.52e-250	84.91	uncharacterized protein LOC111457596 OS=Cucurbita moschata OX=3662 GN=LOC1114575...	[more]
A0A6J1ISN8	1.12e-246	83.73	uncharacterized protein LOC111479599 OS=Cucurbita maxima OX=3661 GN=LOC111479599...	[more]

BLAST of CsGy4G002040 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G42710.1	1.3e-110	52.53	Ribosomal protein L1p/L10e family	[more]
AT3G63490.1	2.0e-37	40.09	Ribosomal protein L1p/L10e family	[more]
AT3G63490.2	1.8e-22	38.01	Ribosomal protein L1p/L10e family	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (Gy14) v2.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR028364	Ribosomal protein L1/ribosomal biogenesis protein	PFAM	PF00687	Ribosomal_L1	coord: 205..398 e-value: 2.9E-34 score: 118.6
IPR028364	Ribosomal protein L1/ribosomal biogenesis protein	CDD	cd00403	Ribosomal_L1	coord: 197..402 e-value: 1.08472E-52 score: 173.524
None	No IPR available	GENE3D	3.30.190.20		coord: 197..402 e-value: 6.8E-65 score: 220.4
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 32..63
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 84..98
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 130..149
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 32..104
None	No IPR available	PANTHER	PTHR36427	54S RIBOSOMAL PROTEIN L1, MITOCHONDRIAL	coord: 38..417
IPR016095	Ribosomal protein L1, 3-layer alpha/beta-sandwich	GENE3D	3.40.50.790		coord: 240..332 e-value: 6.8E-65 score: 220.4
IPR023674	Ribosomal protein L1-like	SUPERFAMILY	56808	Ribosomal protein L1	coord: 186..403

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsGy4G002040.2	CsGy4G002040.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0000470	maturation of LSU-rRNA
cellular_component	GO:0022625	cytosolic large ribosomal subunit
molecular_function	GO:0003729	mRNA binding