
CsGy4G001930 (gene) Cucumber (Gy14) v2.1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCAGCGACGGCGACGGCGACCGGAGTATTGAAGATCGGCGTTCCGGCACCAGCTCCAGCTCCAGCTCCGCCTCCGTTAAAGGCAAAATCAGGAAGGCATCCAACGAATTTTGCAAGCCTCACAATGCGCTATCCAAATTACTTTCTCAATACGCGGATGAAATTTCCTGCCGTTCGAGCACTTGGACAAGGAGGGAATCCGAGCGGCGACGACGACAACGACGCCGGCGGTTTCATCAATCAGGTGTTTGTTTTCCCTAATTGCCTTCTATCTCTAAGTATATAAGAGCATTAAACATATGCTTAGCAGATTGCTGATTCAACATAGTAATTCGATGCCTAATTAGCTGAATTTAGGCTGAATGAAAGAAAAATAGATGGAACTATTCAGTTTACCACATTTTAGCAGTATTTTTACTGATTTCTGGCTAGATTCTATAAGTTTCATTGATTGAATTGGACTGGGAAATCTGGAATTTTAGTAAATTCTTGTCAGGTTAGCTATTCTGTCTTTCGATTATCAAACCTGGAAAAAGAACACTTGAACGCACAAAAAACTAAAGAACACTAAAATATGTTGTATTGCGATAAGAAAAGTAACAACATAAACACAACCTAGTCTTTGCTAATCTCTTATAAATTCTCCAAAGAAAATCCGCAAAATTTCACTCTCTCCTCGTAACCTTACACCCTCTATTTATAGATAAATGCCTAACAAATCAAATTTACTAACTATTTACTAAGATGTCTCTTTTATCAACCATACTGATATTCTACTAATGATCCTACCATTTTCATAACTAGAGATCTTTGGGAGCTCCTTCTTGCATTGATTCAAATTCTTCTTTGATGATGAGTGCATGTTGAGCAACCAGTGTGTAGACCATTTATTATTGATGTTGTGCCAAAATTGCTTTCAGGGCAATGATTTCTTCTACGGCACAATAAATCTTTTTGAAATTCGATTAACAAGGTTTCTATTTCTCTTACCCAATAAATCTCTTTTAAGATATGCTTGATATTGACGGGAAAGCCTAAACTTAAACATAATCAATATAGAATTGTATAGAAAAATGAAAAGAAAGTAGAGTTTCAAAACATTATATTCTATGCAATAAAATTAGTGAAGATGGCCTGGAATTAGAAAACTCAAACATAGACTTACCGTTTTAATTCCAAGATATACAAGTCCAACATGTTCGTCAGCCTCTGCTTGGGAATTTGCTCTTTGTACTCTCTAAGGTAGCAACTGTTTAGTTAAATTACATTTCTTGTTTTCAGACATGGCATATTTAGACTGTAATGGCATCTCTGATAGTTTGATTTAGTTGTTGGTAATAATTTATTTTGTTTATGAGGTAGTGAAACCATATAATAATTTTATCTCACTCCATAGGTAAGACGTTGAGTTATTTTCTATATGTCATTAACATGAGTAAAGACAAGCTTTGGAAGTAGTTTACATTATCTCTCATGCCCTTCTCAAGATTTATTTGGAACGAATTTTCTAAAATATGTTTTTAAGCGTGTTTTAAGCACTTCAAAAGTCATTTCAAGCCGGTTCAAAAGTCATTTCAAGCCGGTTCAAAATATGTTGAAGAAAATGATATGAATATTTACTCGATTGTATCACTTGATTATGTGATAACACAGGAGGATGTGGAATTTTTGTTGAAACTGGGGGCAGGTTCCATAGCAGGGGGATTTGGAATAAAGTATGGAAGCATAATATTTCCAGAGATAACCAAACCCAACATTGTACAAGCACTTATCATGATATCAACTCCTGTGGTTGTAGCAATATGGCTTTTGATCAAGCAAAGTCGTGAAGAGACACAAAGCTAACGATCCACTGTCGTTTTTACAAGATGATGAAAGGATTTTAACCATCCAAAAATTTGTAAAAGAAAAAAAAGTTAGAACTTGTAAAAGCACTAGAAATTGAAAACAGATGAAACACTTTATATTTTTGTGTTGCTCGATAAGATGCCTTACACTATTCATATTGCTCGG ATGGCAGCGACGGCGACGGCGACCGGAGTATTGAAGATCGGCGTTCCGGCACCAGCTCCAGCTCCAGCTCCGCCTCCGTTAAAGGCAAAATCAGGAAGGCATCCAACGAATTTTGCAAGCCTCACAATGCGCTATCCAAATTACTTTCTCAATACGCGGATGAAATTTCCTGCCGTTCGAGCACTTGGACAAGGAGGGAATCCGAGCGGCGACGACGACAACGACGCCGGCGGTTTCATCAATCAGGAGGATGTGGAATTTTTGTTGAAACTGGGGGCAGGTTCCATAGCAGGGGGATTTGGAATAAAGTATGGAAGCATAATATTTCCAGAGATAACCAAACCCAACATTGTACAAGCACTTATCATGATATCAACTCCTGTGGTTGTAGCAATATGGCTTTTGATCAAGCAAAGTCGTGAAGAGACACAAAGCTAACGATCCACTGTCGTTTTTACAAGATGATGAAAGGATTTTAACCATCCAAAAATTTGTAAAAGAAAAAAAAGTTAGAACTTGTAAAAGCACTAGAAATTGAAAACAGATGAAACACTTTATATTTTTGTGTTGCTCGATAAGATGCCTTACACTATTCATATTGCTCGG ATGGCAGCGACGGCGACGGCGACCGGAGTATTGAAGATCGGCGTTCCGGCACCAGCTCCAGCTCCAGCTCCGCCTCCGTTAAAGGCAAAATCAGGAAGGCATCCAACGAATTTTGCAAGCCTCACAATGCGCTATCCAAATTACTTTCTCAATACGCGGATGAAATTTCCTGCCGTTCGAGCACTTGGACAAGGAGGGAATCCGAGCGGCGACGACGACAACGACGCCGGCGGTTTCATCAATCAGGAGGATGTGGAATTTTTGTTGAAACTGGGGGCAGGTTCCATAGCAGGGGGATTTGGAATAAAGTATGGAAGCATAATATTTCCAGAGATAACCAAACCCAACATTGTACAAGCACTTATCATGATATCAACTCCTGTGGTTGTAGCAATATGGCTTTTGATCAAGCAAAGTCGTGAAGAGACACAAAGCTAA MAATATATGVLKIGVPAPAPAPAPPPLKAKSGRHPTNFASLTMRYPNYFLNTRMKFPAVRALGQGGNPSGDDDNDAGGFINQEDVEFLLKLGAGSIAGGFGIKYGSIIFPEITKPNIVQALIMISTPVVVAIWLLIKQSREETQS* Homology
BLAST of CsGy4G001930 vs. NCBI nr
Match: XP_004152177.2 (uncharacterized protein LOC101209077 isoform X1 [Cucumis sativus] >KGN52937.1 hypothetical protein Csa_014893 [Cucumis sativus]) HSP 1 Score: 282 bits (722), Expect = 9.58e-96 Identity = 145/145 (100.00%), Postives = 145/145 (100.00%), Query Frame = 0
BLAST of CsGy4G001930 vs. NCBI nr
Match: XP_008454177.1 (PREDICTED: uncharacterized protein LOC103494660 [Cucumis melo] >XP_016901530.1 PREDICTED: uncharacterized protein LOC103494660 [Cucumis melo]) HSP 1 Score: 241 bits (616), Expect = 1.06e-79 Identity = 127/145 (87.59%), Postives = 131/145 (90.34%), Query Frame = 0
BLAST of CsGy4G001930 vs. NCBI nr
Match: XP_038902938.1 (uncharacterized protein LOC120089511 [Benincasa hispida]) HSP 1 Score: 214 bits (546), Expect = 4.65e-69 Identity = 113/145 (77.93%), Postives = 121/145 (83.45%), Query Frame = 0
BLAST of CsGy4G001930 vs. NCBI nr
Match: XP_022153461.1 (uncharacterized protein LOC111020963 [Momordica charantia]) HSP 1 Score: 176 bits (446), Expect = 9.52e-54 Identity = 103/151 (68.21%), Postives = 112/151 (74.17%), Query Frame = 0
BLAST of CsGy4G001930 vs. NCBI nr
Match: XP_022955512.1 (uncharacterized protein LOC111457518 isoform X1 [Cucurbita moschata] >KAG7018380.1 hypothetical protein SDJN02_20248 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 173 bits (439), Expect = 8.57e-53 Identity = 100/145 (68.97%), Postives = 111/145 (76.55%), Query Frame = 0
BLAST of CsGy4G001930 vs. ExPASy TrEMBL
Match: A0A0A0KWZ3 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G006440 PE=4 SV=1) HSP 1 Score: 282 bits (722), Expect = 4.64e-96 Identity = 145/145 (100.00%), Postives = 145/145 (100.00%), Query Frame = 0
BLAST of CsGy4G001930 vs. ExPASy TrEMBL
Match: A0A1S4E0N1 (uncharacterized protein LOC103494660 OS=Cucumis melo OX=3656 GN=LOC103494660 PE=4 SV=1) HSP 1 Score: 241 bits (616), Expect = 5.16e-80 Identity = 127/145 (87.59%), Postives = 131/145 (90.34%), Query Frame = 0
BLAST of CsGy4G001930 vs. ExPASy TrEMBL
Match: A0A6J1DKQ3 (uncharacterized protein LOC111020963 OS=Momordica charantia OX=3673 GN=LOC111020963 PE=4 SV=1) HSP 1 Score: 176 bits (446), Expect = 4.61e-54 Identity = 103/151 (68.21%), Postives = 112/151 (74.17%), Query Frame = 0
BLAST of CsGy4G001930 vs. ExPASy TrEMBL
Match: A0A6J1GTV4 (uncharacterized protein LOC111457518 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111457518 PE=4 SV=1) HSP 1 Score: 173 bits (439), Expect = 4.15e-53 Identity = 100/145 (68.97%), Postives = 111/145 (76.55%), Query Frame = 0
BLAST of CsGy4G001930 vs. ExPASy TrEMBL
Match: A0A6J1GU58 (uncharacterized protein LOC111457518 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111457518 PE=4 SV=1) HSP 1 Score: 167 bits (422), Expect = 1.55e-50 Identity = 99/145 (68.28%), Postives = 110/145 (75.86%), Query Frame = 0
BLAST of CsGy4G001930 vs. TAIR 10
Match: AT3G15900.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; Has 26 Blast hits to 26 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 26; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 68.9 bits (167), Expect = 3.7e-12 Identity = 31/63 (49.21%), Postives = 46/63 (73.02%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (Gy14) v2.1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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