CsGy3G044963 (gene) Cucumber (Gy14) v2.1

Overview


Name	CsGy3G044963
Type	gene
Organism	Cucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
Description	WD repeat-containing protein RUP2-like
Location	Gy14Chr3: 41623975 .. 41625496 (-)
RNA-Seq Expression	CsGy3G044963
Synteny	CsGy3G044963

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

TATTTATTCCTTTGAATCTACTACTTTTCATCTCTCTTTTCCTCCTCATTTTATCCTCAATTAATTATTTTCCTTCTTCTATTTCAAACTTAGATATTTTCACTCAAATAATAATTGATAATGGATTATCATATTTGGATGTGAATTTGAGTTGAATGACATATTACAGTGGATGTTTAAAATATGCATGAGTCAGAAATGTTGTATTTTCAGATAATGGCAGTAAATTCGGTGGAGGACATGATAAGAAAAAAAGAAAAAGAAAAGAGGAACACAAAAAAGAGTAGTTGTTTAAACTGGAAGATTAAAGTAAAGGGAATGTGATAAAAGTAGTATGGTGAAATTAAAGCAGCTGCTGCTGCTAAAACCAGAACAAGTATGAGGATGCTATTTATCCACATCACACAAATTTTCAATAAGAGAAAAGGAAAAAAAAAAAGAAAAGAAAAGGGTAGTTGAATGGAGGGCGTAGATTGGTTCCAATTCCCGAAAACCCCCAACTGTCGTCGTTACAATTTCCTTTTTCCCTTCCACTCCTTATGAATGGGAAATGAGAAGCAGCCTCTCCTCTCCCAGTTCCCCAACCCCACAAATCCAAAACTCAGAAAAACTCACACAACAATCCCCAACCCCCCTTCGATGCGAATGGGATTTCACCCTCGCCTCCGTCGTCTCCTCCCCCACCAATTGCGCCGCTTCTGACACACTCGGCGTTGTCGAATTCGACCCTTCCGATTCCCTCATCGCCACCGCCGGAATCGCTAGAAAAATCCGTGGCTACCGTCTTCATAATCTCCTACCCCAAGACATTGATCATAACGCTACTATTACTCAATTGGACCACACCCGTGCTTCTGATTTCTGCATCTGTACTCCCGCTAAACTCAGTAGCCTCCGTTGGAAACCCAATGCTAACGGTCGAATCTTAGGCTCCGGCGATTACGATGGGGTTGTCATGGAGTACGATCTGGAAATGAAGGTACCGATTTTCGAACGAGATGAACATGGGGGCCGACGCGTCTGGAGTGTGGATTACTCAACAGTAGAGCCCGTAGTGGGAGCGTCCGGGTCAGACGATGGAACAGTGCAAGTATGGGATACGCGATGTGAGAGTGGGGAGTGCGTGGCGGTGGTGCAGCCGAGCGTGGTACGGAGTGCGGTTTGTTGCGTGGAATTCAACCCGTTCGGAGGGGGGTTAGTGGCGGTTGGATGCGCGGACAGGAAAGCATATGGGTACGACAGACGGAAAATGAGGGAACCGGTAGTGGTATTCGAAGGGCATGGGAAAACGGTGACGTATGTGAAATTCGTGGACGGAGGGACGGTGGTGTCGGCGAGTACAGACGGGAGTTTAAAGATGTGGAAGACGGAGGAGGGAGGGGGTGCAAGGGTGGTACGCACGTACGAGGGGCACGTGAATGGGAGGAGCTTTGTGGGGTTATCAGTGTGGAGGGAGGGGGGCTTAATCGGGTGTGGATCGGAGGACAAGAGAGTGTTTGTGTACGATAAGAGATGGGGAGAG

mRNA sequence

TATTTATTCCTTTGAATCTACTACTTTTCATCTCTCTTTTCCTCCTCATTTTATCCTCAATTAATTATTTTCCTTCTTCTATTTCAAACTTAGATATTTTCACTCAAATAATAATTGATAATGGATTATCATATTTGGATGTGAATTTGAGTTGAATGACATATTACAGTGGATGTTTAAAATATGCATGAGTCAGAAATGTTGTATTTTCAGATAATGGCAGTAAATTCGGTGGAGGACATGATAAGAAAAAAAGAAAAAGAAAAGAGGAACACAAAAAAGAGTAGTTGTTTAAACTGGAAGATTAAAGTAAAGGGAATGTGATAAAAGTAGTATGGTGAAATTAAAGCAGCTGCTGCTGCTAAAACCAGAACAAGTATGAGGATGCTATTTATCCACATCACACAAATTTTCAATAAGAGAAAAGGAAAAAAAAAAAGAAAAGAAAAGGGTAGTTGAATGGAGGGCGTAGATTGGTTCCAATTCCCGAAAACCCCCAACTGTCGTCGTTACAATTTCCTTTTTCCCTTCCACTCCTTATGAATGGGAAATGAGAAGCAGCCTCTCCTCTCCCAGTTCCCCAACCCCACAAATCCAAAACTCAGAAAAACTCACACAACAATCCCCAACCCCCCTTCGATGCGAATGGGATTTCACCCTCGCCTCCGTCGTCTCCTCCCCCACCAATTGCGCCGCTTCTGACACACTCGGCGTTGTCGAATTCGACCCTTCCGATTCCCTCATCGCCACCGCCGGAATCGCTAGAAAAATCCGTGGCTACCGTCTTCATAATCTCCTACCCCAAGACATTGATCATAACGCTACTATTACTCAATTGGACCACACCCGTGCTTCTGATTTCTGCATCTGTACTCCCGCTAAACTCAGTAGCCTCCGTTGGAAACCCAATGCTAACGGTCGAATCTTAGGCTCCGGCGATTACGATGGGGTTGTCATGGAGTACGATCTGGAAATGAAGGTACCGATTTTCGAACGAGATGAACATGGGGGCCGACGCGTCTGGAGTGTGGATTACTCAACAGTAGAGCCCGTAGTGGGAGCGTCCGGGTCAGACGATGGAACAGTGCAAGTATGGGATACGCGATGTGAGAGTGGGGAGTGCGTGGCGGTGGTGCAGCCGAGCGTGGTACGGAGTGCGGTTTGTTGCGTGGAATTCAACCCGTTCGGAGGGGGGTTAGTGGCGGTTGGATGCGCGGACAGGAAAGCATATGGGTACGACAGACGGAAAATGAGGGAACCGGTAGTGGTATTCGAAGGGCATGGGAAAACGGTGACGTATGTGAAATTCGTGGACGGAGGGACGGTGGTGTCGGCGAGTACAGACGGGAGTTTAAAGATGTGGAAGACGGAGGAGGGAGGGGGTGCAAGGGTGGTACGCACGTACGAGGGGCACGTGAATGGGAGGAGCTTTGTGGGGTTATCAGTGTGGAGGGAGGGGGGCTTAATCGGGTGTGGATCGGAGGACAAGAGAGTGTTTGTGTACGATAAGAGATGGGGAGAG

Coding sequence (CDS)

ATGAGAAGCAGCCTCTCCTCTCCCAGTTCCCCAACCCCACAAATCCAAAACTCAGAAAAACTCACACAACAATCCCCAACCCCCCTTCGATGCGAATGGGATTTCACCCTCGCCTCCGTCGTCTCCTCCCCCACCAATTGCGCCGCTTCTGACACACTCGGCGTTGTCGAATTCGACCCTTCCGATTCCCTCATCGCCACCGCCGGAATCGCTAGAAAAATCCGTGGCTACCGTCTTCATAATCTCCTACCCCAAGACATTGATCATAACGCTACTATTACTCAATTGGACCACACCCGTGCTTCTGATTTCTGCATCTGTACTCCCGCTAAACTCAGTAGCCTCCGTTGGAAACCCAATGCTAACGGTCGAATCTTAGGCTCCGGCGATTACGATGGGGTTGTCATGGAGTACGATCTGGAAATGAAGGTACCGATTTTCGAACGAGATGAACATGGGGGCCGACGCGTCTGGAGTGTGGATTACTCAACAGTAGAGCCCGTAGTGGGAGCGTCCGGGTCAGACGATGGAACAGTGCAAGTATGGGATACGCGATGTGAGAGTGGGGAGTGCGTGGCGGTGGTGCAGCCGAGCGTGGTACGGAGTGCGGTTTGTTGCGTGGAATTCAACCCGTTCGGAGGGGGGTTAGTGGCGGTTGGATGCGCGGACAGGAAAGCATATGGGTACGACAGACGGAAAATGAGGGAACCGGTAGTGGTATTCGAAGGGCATGGGAAAACGGTGACGTATGTGAAATTCGTGGACGGAGGGACGGTGGTGTCGGCGAGTACAGACGGGAGTTTAAAGATGTGGAAGACGGAGGAGGGAGGGGGTGCAAGGGTGGTACGCACGTACGAGGGGCACGTGAATGGGAGGAGCTTTGTGGGGTTATCAGTGTGGAGGGAGGGGGGCTTAATCGGGTGTGGATCGGAGGACAAGAGAGTGTTTGTGTACGATAAGAGATGGGGAGAG

Protein sequence

MRSSLSSPSSPTPQIQNSEKLTQQSPTPLRCEWDFTLASVVSSPTNCAASDTLGVVEFDPSDSLIATAGIARKIRGYRLHNLLPQDIDHNATITQLDHTRASDFCICTPAKLSSLRWKPNANGRILGSGDYDGVVMEYDLEMKVPIFERDEHGGRRVWSVDYSTVEPVVGASGSDDGTVQVWDTRCESGECVAVVQPSVVRSAVCCVEFNPFGGGLVAVGCADRKAYGYDRRKMREPVVVFEGHGKTVTYVKFVDGGTVVSASTDGSLKMWKTEEGGGARVVRTYEGHVNGRSFVGLSVWREGGLIGCGSEDKRVFVYDKRWGE

Homology

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BLAST of CsGy3G044963 vs. ExPASy Swiss-Prot
Match: Q9FFA7 (WD repeat-containing protein RUP2 OS=Arabidopsis thaliana OX=3702 GN=RUP2 PE=1 SV=1)

HSP 1 Score: 394.8 bits (1013), Expect = 9.3e-109
Identity = 191/315 (60.63%), Postives = 239/315 (75.87%), Query Frame = 0


Query: 13  PQIQNSEKLTQQSPTPLRCEWDFTLASVVSSPTNCAASDTLGVVEFDPSDSLIATAGIAR 72
           P  Q  E+  QQ     R EWD +L++VVSS ++ +ASD +G +EFDP+D+++ATAGI+R
Sbjct: 6   PHKQQQEQAQQQEEA--RYEWDLSLSTVVSS-SSSSASDVIGAIEFDPTDNIVATAGISR 65

Query: 73  KIRGYRLHNLLPQDIDHNATITQLDHTRASDFCICTPAKLSSLRWKPNANGRILGSGDYD 132
           KIR Y L +LL  +      ++ +D   A ++ ICTPAKLSSLRW+P + GR++GSGDYD
Sbjct: 66  KIRFYGLPSLLRNNAVSGTGVSFVDQATACEYYICTPAKLSSLRWRPGSGGRVIGSGDYD 125

Query: 133 GVVMEYDLEMKVPIFERDEHGGRRVWSVDYST--VEPVVGASGSDDGTVQVWDTRCESGE 192
           GVVMEYDLE + P+FERDEHGGRRVWSVDY+       VGASGSDDGT+QVWD RC   E
Sbjct: 126 GVVMEYDLEKRTPVFERDEHGGRRVWSVDYTRHGGASTVGASGSDDGTMQVWDPRCPPEE 185

Query: 193 CVAVVQPS-VVRSAVCCVEFNPFGGGLVAVGCADRKAYGYDRRKMREPVVVFEGHGKTVT 252
            V VV+P+ + RSAVCCVEF+P GG  VAVGCADRK Y YD RK+ +P +  +GH KTV+
Sbjct: 186 SVGVVRPAGICRSAVCCVEFDPSGGPAVAVGCADRKGYVYDIRKLVDPALTLQGHTKTVS 245

Query: 253 YVKFVDGGTVVSASTDGSLKMWKTEEGGGARVVRTYEGHVNGRSFVGLSVWREGGLIGCG 312
           YV+F+DGGTVV+A TDG LK+W  E+G   RV+RTYEGHVN R+FVGLSVWR G L GCG
Sbjct: 246 YVRFLDGGTVVTAGTDGCLKLWSVEDG---RVIRTYEGHVNNRNFVGLSVWRNGALFGCG 305

Query: 313 SEDKRVFVYDKRWGE 325
           SE+ RVFVYD+RWG+
Sbjct: 306 SENNRVFVYDRRWGK 314

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BLAST of CsGy3G044963 vs. ExPASy Swiss-Prot
Match: Q9LTJ6 (WD repeat-containing protein RUP1 OS=Arabidopsis thaliana OX=3702 GN=RUP1 PE=1 SV=1)

HSP 1 Score: 357.1 bits (915), Expect = 2.1e-97
Identity = 184/330 (55.76%), Postives = 234/330 (70.91%), Query Frame = 0


Query: 3   SSLSSPSSPT-PQIQNSEKLTQQSPTPL------RCEWDFTLASVVSSPTNCAASDTLGV 62
           + LSS SS T P I  S   +  SPT +      RC+WD +L++VVSS +    SD +G 
Sbjct: 19  NDLSSSSSYTWPMIMTSSSSSSSSPTIMNIENIPRCDWDLSLSAVVSSAS--TGSDAIGA 78

Query: 63  VEFDPSDSLIATAGIARKIRGYRLHNLLPQDIDHNATITQLDHTRASDFCICTPAKLSSL 122
           +EFDP+  +IAT GIARKIR YRL +LL          ++ DH  AS+  ICTPAKLSSL
Sbjct: 79  IEFDPTGEIIATGGIARKIRSYRLSSLLE---------SRDDHVTASESYICTPAKLSSL 138

Query: 123 RWKPNANGRILGSGDYDGVVMEYDLEMKVPIFERDEHGGRRVWSVDYSTVE-PVVGASGS 182
           +W+P+ +GR++GSGDYDGVV EYD+E +VP+ ERDEHGGRR+WSVDY+     ++GASGS
Sbjct: 139 KWRPDFSGRVIGSGDYDGVVTEYDVEKQVPVSERDEHGGRRIWSVDYTLYNGSLIGASGS 198

Query: 183 DDGTVQVWDTRCESGECVAVVQPSVVRSAVCCVEFNPFGGGLVAVGCADRKAYGYDRRKM 242
           DDGTVQ+WD R   G     V+P    +A+C VEF+PFGG  +AVGCADR AY YD R++
Sbjct: 199 DDGTVQMWDPR-NGGTLEETVRPG-GGAAICSVEFDPFGGSSIAVGCADRNAYVYDIRRL 258

Query: 243 REPVVVFEGHGKTVTYVKFVDGGTVVSASTDGSLKMWKTEEGGGARVVRTYEGHVNGRSF 302
            +P++V +GH KTVTY +F+D  T+V+ STDGSLK W  +   G RVVRTY GHVN R+F
Sbjct: 259 VDPLIVLDGHTKTVTYARFMDSHTIVTGSTDGSLKQWDID--NGRRVVRTYRGHVNSRNF 318

Query: 303 VGLSVWREGGLIGCGSEDKRVFVYDKRWGE 325
           VGLSVWR GGL+  GSE+ +VFVYDKRW E
Sbjct: 319 VGLSVWRHGGLVVSGSENNQVFVYDKRWEE 333

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BLAST of CsGy3G044963 vs. ExPASy Swiss-Prot
Match: P93471 (E3 ubiquitin-protein ligase COP1 OS=Pisum sativum OX=3888 GN=COP1 PE=2 SV=1)

HSP 1 Score: 185.3 bits (469), Expect = 1.1e-45
Identity = 102/272 (37.50%), Postives = 154/272 (56.62%), Query Frame = 0


Query: 49  ASDTLGVVEFDPSDSLIATAGIARKIRGYRLHNLLPQDIDHNATITQLDHTRASDFCICT 108
           +++ +  +EFD  D L ATAG++R+I+ +    ++ +  D +  + ++           T
Sbjct: 367 SANIVSSIEFDRDDDLFATAGVSRRIKVFDFSAVVNEPTDAHCPVVEM----------TT 426

Query: 109 PAKLSSLRWKPNANGRILGSGDYDGVVMEYDLEMKVPIFERDEHGGRRVWSVDYSTVEPV 168
            +KLS L W   A  +I  S DY+G+V  + +  +  + E +EH  +R WSVD+S  +P 
Sbjct: 427 RSKLSCLSWNKYAKNQI-ASSDYEGIVTVWTMTTRKSLMEYEEH-EKRAWSVDFSRTDPS 486

Query: 169 VGASGSDDGTVQVWDTRCESGECVAVVQPSVVRSAVCCVEFNPFGGGLVAVGCADRKAYG 228
           +  SGSDD  V+VW T  E     A V    +++ +CCV++NP  G  +AVG AD   + 
Sbjct: 487 MLVSGSDDCKVKVWCTNQE-----ASVLNIDMKANICCVKYNPGSGNYIAVGSADHHIHY 546

Query: 229 YDRRKMREPVVVFEGHGKTVTYVKFVDGGTVVSASTDGSLKMWKTEEGGGARVVRTYEGH 288
           YD R +  PV VF GH K V+YVKF+    + SASTD +L++W  ++      VRT+ GH
Sbjct: 547 YDLRNISRPVHVFTGHKKAVSYVKFLSNDELASASTDSTLRLWDVKQN---LPVRTFRGH 606

Query: 289 VNGRSFVGLSVWREGGLIGCGSEDKRVFVYDK 321
            N ++FVGL+V  E   I CGSE   VFVY K
Sbjct: 607 ANEKNFVGLTVRSE--YIACGSETNEVFVYHK 616

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BLAST of CsGy3G044963 vs. ExPASy Swiss-Prot
Match: P43254 (E3 ubiquitin-protein ligase COP1 OS=Arabidopsis thaliana OX=3702 GN=COP1 PE=1 SV=2)

HSP 1 Score: 184.9 bits (468), Expect = 1.5e-45
Identity = 101/272 (37.13%), Postives = 154/272 (56.62%), Query Frame = 0


Query: 49  ASDTLGVVEFDPSDSLIATAGIARKIRGYRLHNLLPQDIDHNATITQLDHTRASDFCICT 108
           +++ +  +EFD  D L ATAG++R I+ +   +++ +  D    I ++           T
Sbjct: 370 SANIVSSIEFDRDDELFATAGVSRCIKVFDFSSVVNEPADMQCPIVEMS----------T 429

Query: 109 PAKLSSLRWKPNANGRILGSGDYDGVVMEYDLEMKVPIFERDEHGGRRVWSVDYSTVEPV 168
            +KLS L W  +    I  S DY+G+V  +D+  +  + E +EH  +R WSVD+S  EP 
Sbjct: 430 RSKLSCLSWNKHEKNHI-ASSDYEGIVTVWDVTTRQSLMEYEEH-EKRAWSVDFSRTEPS 489

Query: 169 VGASGSDDGTVQVWDTRCESGECVAVVQPSVVRSAVCCVEFNPFGGGLVAVGCADRKAYG 228
           +  SGSDD  V+VW TR E     A V    +++ +CCV++NP     +AVG AD   + 
Sbjct: 490 MLVSGSDDCKVKVWCTRQE-----ASVINIDMKANICCVKYNPGSSNYIAVGSADHHIHY 549

Query: 229 YDRRKMREPVVVFEGHGKTVTYVKFVDGGTVVSASTDGSLKMWKTEEGGGARVVRTYEGH 288
           YD R + +P+ VF GH K V+YVKF+    + SASTD +L++W  ++      VRT+ GH
Sbjct: 550 YDLRNISQPLHVFSGHKKAVSYVKFLSNNELASASTDSTLRLWDVKDN---LPVRTFRGH 609

Query: 289 VNGRSFVGLSVWREGGLIGCGSEDKRVFVYDK 321
            N ++FVGL+V  E   + CGSE   V+VY K
Sbjct: 610 TNEKNFVGLTVNSE--YLACGSETNEVYVYHK 619

[Close]

BLAST of CsGy3G044963 vs. ExPASy Swiss-Prot
Match: Q9LJR3 (Protein SPA1-RELATED 3 OS=Arabidopsis thaliana OX=3702 GN=SPA3 PE=1 SV=1)

HSP 1 Score: 168.7 bits (426), Expect = 1.1e-40
Identity = 113/334 (33.83%), Postives = 172/334 (51.50%), Query Frame = 0


Query: 2   RSSLSSPSSPTPQIQNSEK------------LTQQSPTPLRCEWDFTLASVVSSPTNCAA 61
           +SS+S+P +P     N  +                S + LR + D     +++S      
Sbjct: 480 KSSVSNPVAPKAFFNNDSRQGGWIDPFLEGLCRYLSFSQLRVKADLKQGDLLNS------ 539

Query: 62  SDTLGVVEFDPSDSLIATAGIARKIRGYRLHNLLPQDIDHNATITQLDHTRASDFCICTP 121
           S+ +  + FD    L ATAG+ +KI+ +  ++++  + D +  + +L             
Sbjct: 540 SNLVCALAFDREGELFATAGVNKKIKIFECNSIVNDNRDIHYPVVEL----------AGR 599

Query: 122 AKLSSLRWKPNANGRILGSGDYDGVVMEYDLEMKVPIFERDEHGGRRVWSVDYSTVEPVV 181
           +KLSSL W      +I  S ++DGVV  +D+     + E  EH  +RVWS+D S+ +P +
Sbjct: 600 SKLSSLCWNSYIKSQI-ASSNFDGVVQIWDVARSQLVTEMKEH-KKRVWSIDISSADPTL 659

Query: 182 GASGSDDGTVQVWDTRCESGECVAVVQPSVVRSAVCCVEFNPFGGGLVAVGCADRKAYGY 241
            ASGSDDGTV++W      G  +  ++    ++ VCCV+F    G  +A G AD K Y Y
Sbjct: 660 LASGSDDGTVKLWS--INQGVSIGTIK---TKANVCCVQFPSDSGRSLAFGSADHKVYYY 719

Query: 242 DRRKMREPVVVFEGHGKTVTYVKFVDGGTVVSASTDGSLKMW---KTEEGGGARVVRTYE 301
           D R  + P+    GH KTV+YVKFVD  T+VS+STD +LK+W    +  G     + ++ 
Sbjct: 720 DLRNPKIPLCTMIGHSKTVSYVKFVDSSTLVSSSTDNTLKLWDLSMSASGINESPLHSFT 779

Query: 302 GHVNGRSFVGLSVWREGGLIGCGSEDKRVFVYDK 321
           GH N ++FVGLSV    G I  GSE   VFVY K
Sbjct: 780 GHTNLKNFVGLSV--SDGYIATGSETNEVFVYHK 788

[Close]

BLAST of CsGy3G044963 vs. NCBI nr
Match: XP_004148378.3 (LOW QUALITY PROTEIN: WD repeat-containing protein RUP2 [Cucumis sativus])

HSP 1 Score: 660 bits (1703), Expect = 2.26e-238
Identity = 323/324 (99.69%), Postives = 323/324 (99.69%), Query Frame = 0


Query: 1   MRSSLSSPSSPTPQIQNSEKLTQQSPTPLRCEWDFTLASVVSSPTNCAASDTLGVVEFDP 60
           MRSSLSSPSSPTPQIQNSEKLTQQSPTPLRCEWDFTLASVVSSPTNCAASDTLGVVEFDP
Sbjct: 1   MRSSLSSPSSPTPQIQNSEKLTQQSPTPLRCEWDFTLASVVSSPTNCAASDTLGVVEFDP 60

Query: 61  SDSLIATAGIARKIRGYRLHNLLPQDIDHNATITQLDHTRASDFCICTPAKLSSLRWKPN 120
           SDSLIATAGIARKIRGYRLHNLLPQDIDHNATITQLDHTRASDFCICTPAKLSSLRWKPN
Sbjct: 61  SDSLIATAGIARKIRGYRLHNLLPQDIDHNATITQLDHTRASDFCICTPAKLSSLRWKPN 120

Query: 121 ANGRILGSGDYDGVVMEYDLEMKVPIFERDEHGGRRVWSVDYSTVEPVVGASGSDDGTVQ 180
           ANGRILGSGDYDGVVMEYDLEMKVPIFERDEHGGRRVWSVDYSTVEPVVGASGSDDGTVQ
Sbjct: 121 ANGRILGSGDYDGVVMEYDLEMKVPIFERDEHGGRRVWSVDYSTVEPVVGASGSDDGTVQ 180

Query: 181 VWDTRCESGECVAVVQPSVVRSAVCCVEFNPFGGGLVAVGCADRKAYGYDRRKMREPVVV 240
           VWDTRCESGECVAVVQPSVVRSAVCCVEFNPFGGGLVAVGCADRKAYGYDRRKMREPVVV
Sbjct: 181 VWDTRCESGECVAVVQPSVVRSAVCCVEFNPFGGGLVAVGCADRKAYGYDRRKMREPVVV 240

Query: 241 FEGHGKTVTYVKFVDGGTVVSASTDGSLKMWKTEEGGGARVVRTYEGHVNGRSFVGLSVW 300
           FEGHGKTVTYVKFVDGGTVVSASTDGSLKMWKTEEGGGARVVRTYEGHVNGRSFVGLSVW
Sbjct: 241 FEGHGKTVTYVKFVDGGTVVSASTDGSLKMWKTEEGGGARVVRTYEGHVNGRSFVGLSVW 300

Query: 301 REGGLIGCGSEDKRVFVYDKRWGE 324
           R GGLIGCGSEDKRVFVYDKRWGE
Sbjct: 301 RXGGLIGCGSEDKRVFVYDKRWGE 324

[Close]

BLAST of CsGy3G044963 vs. NCBI nr
Match: KAE8651477.1 (hypothetical protein Csa_002658 [Cucumis sativus])

HSP 1 Score: 617 bits (1590), Expect = 1.85e-222
Identity = 303/303 (100.00%), Postives = 303/303 (100.00%), Query Frame = 0


Query: 1   MRSSLSSPSSPTPQIQNSEKLTQQSPTPLRCEWDFTLASVVSSPTNCAASDTLGVVEFDP 60
           MRSSLSSPSSPTPQIQNSEKLTQQSPTPLRCEWDFTLASVVSSPTNCAASDTLGVVEFDP
Sbjct: 1   MRSSLSSPSSPTPQIQNSEKLTQQSPTPLRCEWDFTLASVVSSPTNCAASDTLGVVEFDP 60

Query: 61  SDSLIATAGIARKIRGYRLHNLLPQDIDHNATITQLDHTRASDFCICTPAKLSSLRWKPN 120
           SDSLIATAGIARKIRGYRLHNLLPQDIDHNATITQLDHTRASDFCICTPAKLSSLRWKPN
Sbjct: 61  SDSLIATAGIARKIRGYRLHNLLPQDIDHNATITQLDHTRASDFCICTPAKLSSLRWKPN 120

Query: 121 ANGRILGSGDYDGVVMEYDLEMKVPIFERDEHGGRRVWSVDYSTVEPVVGASGSDDGTVQ 180
           ANGRILGSGDYDGVVMEYDLEMKVPIFERDEHGGRRVWSVDYSTVEPVVGASGSDDGTVQ
Sbjct: 121 ANGRILGSGDYDGVVMEYDLEMKVPIFERDEHGGRRVWSVDYSTVEPVVGASGSDDGTVQ 180

Query: 181 VWDTRCESGECVAVVQPSVVRSAVCCVEFNPFGGGLVAVGCADRKAYGYDRRKMREPVVV 240
           VWDTRCESGECVAVVQPSVVRSAVCCVEFNPFGGGLVAVGCADRKAYGYDRRKMREPVVV
Sbjct: 181 VWDTRCESGECVAVVQPSVVRSAVCCVEFNPFGGGLVAVGCADRKAYGYDRRKMREPVVV 240

Query: 241 FEGHGKTVTYVKFVDGGTVVSASTDGSLKMWKTEEGGGARVVRTYEGHVNGRSFVGLSVW 300
           FEGHGKTVTYVKFVDGGTVVSASTDGSLKMWKTEEGGGARVVRTYEGHVNGRSFVGLSVW
Sbjct: 241 FEGHGKTVTYVKFVDGGTVVSASTDGSLKMWKTEEGGGARVVRTYEGHVNGRSFVGLSVW 300

Query: 301 REG 303
           REG
Sbjct: 301 REG 303

[Close]

BLAST of CsGy3G044963 vs. NCBI nr
Match: KAA0038490.1 (WD repeat-containing protein RUP2-like [Cucumis melo var. makuwa])

HSP 1 Score: 619 bits (1597), Expect = 2.21e-222
Identity = 306/322 (95.03%), Postives = 311/322 (96.58%), Query Frame = 0


Query: 4   SLSSPSSPTPQIQNSEKLTQQSPTPLRCEWDFTLASVVSSPTNCAASDTLGVVEFDPSDS 63
           S+SSPSSPTPQ QN EKL QQSP P  CEWDFTLASVVSSPTNCAASDTLGV+EFDPSDS
Sbjct: 3   SVSSPSSPTPQNQNPEKLKQQSPLP--CEWDFTLASVVSSPTNCAASDTLGVLEFDPSDS 62

Query: 64  LIATAGIARKIRGYRLHNLLPQDIDHNAT-ITQLDHTRASDFCICTPAKLSSLRWKPNAN 123
           LIATAGIARKIRGYRLHNLLPQDI HNAT ITQLDH+RASDFCICTPAKLSSLRWKPNAN
Sbjct: 63  LIATAGIARKIRGYRLHNLLPQDIHHNATTITQLDHSRASDFCICTPAKLSSLRWKPNAN 122

Query: 124 GRILGSGDYDGVVMEYDLEMKVPIFERDEHGGRRVWSVDYSTVEPVVGASGSDDGTVQVW 183
            RILGSGDYDGVV EYDLEMKVPIFERDEHGGRRVWSVDYSTVEPVVGASGSDDGTVQVW
Sbjct: 123 ARILGSGDYDGVVTEYDLEMKVPIFERDEHGGRRVWSVDYSTVEPVVGASGSDDGTVQVW 182

Query: 184 DTRCESGECVAVVQPSVVRSAVCCVEFNPFGGGLVAVGCADRKAYGYDRRKMREPVVVFE 243
           DTRCESGECVAVVQPSVVRS VCCVEFNP+GGGLVAVGCADRKAYGYDRRKMREPVVVFE
Sbjct: 183 DTRCESGECVAVVQPSVVRSPVCCVEFNPYGGGLVAVGCADRKAYGYDRRKMREPVVVFE 242

Query: 244 GHGKTVTYVKFVDGGTVVSASTDGSLKMWKTEEGGGARVVRTYEGHVNGRSFVGLSVWRE 303
           GHGKTVTYVKFVDGGTVVSASTDGSLKMWKTEEGGGARVVRTYEGHVNGRSFVGLSVWR+
Sbjct: 243 GHGKTVTYVKFVDGGTVVSASTDGSLKMWKTEEGGGARVVRTYEGHVNGRSFVGLSVWRK 302

Query: 304 GGLIGCGSEDKRVFVYDKRWGE 324
           GGLIGCGSEDKRVFVYDKRWGE
Sbjct: 303 GGLIGCGSEDKRVFVYDKRWGE 322

[Close]

BLAST of CsGy3G044963 vs. NCBI nr
Match: XP_038887335.1 (WD repeat-containing protein RUP2-like [Benincasa hispida])

HSP 1 Score: 560 bits (1442), Expect = 8.67e-199
Identity = 281/325 (86.46%), Postives = 294/325 (90.46%), Query Frame = 0


Query: 4   SLSSPSSP---TPQIQNSEKLTQQSPTPLRCEWDFTLASVVSSPTNC-AASDTLGVVEFD 63
           SL +P+SP    P+ Q   KL Q   TP RCEWDFTLA++VSS +   AASDTLGVVEFD
Sbjct: 3   SLCTPNSPQNQNPEKQLHNKLQQNETTPPRCEWDFTLAALVSSSSAIGAASDTLGVVEFD 62

Query: 64  PSDSLIATAGIARKIRGYRLHNLLPQDIDHNATITQLDHTRASDFCICTPAKLSSLRWKP 123
           PSDSLIATAGIARKIRGYRLHNLLP++I HN TI QLDH+RAS+FCICTPAKLSSLRWKP
Sbjct: 63  PSDSLIATAGIARKIRGYRLHNLLPENI-HNGTINQLDHSRASEFCICTPAKLSSLRWKP 122

Query: 124 NANGRILGSGDYDGVVMEYDLEMKVPIFERDEHGGRRVWSVDYSTVEPVVGASGSDDGTV 183
             NGRILGSGDYDGVVMEYDLEMKVPIFERDEHGGRRVWSVDYS V+PVVGASGSDDGTV
Sbjct: 123 GVNGRILGSGDYDGVVMEYDLEMKVPIFERDEHGGRRVWSVDYSMVDPVVGASGSDDGTV 182

Query: 184 QVWDTRCESGECVAVVQPSVVRSAVCCVEFNPFGGGLVAVGCADRKAYGYDRRKMREPVV 243
           QVWDTRC+ GECVAVVQPSVVRS VCCVEFNP+GG LVAVGCADRKAYGYDRRKMREPVV
Sbjct: 183 QVWDTRCDGGECVAVVQPSVVRSPVCCVEFNPYGGALVAVGCADRKAYGYDRRKMREPVV 242

Query: 244 VFEGHGKTVTYVKFVDGGTVVSASTDGSLKMWKTEEGGGARVVRTYEGHVNGRSFVGLSV 303
           VFEGHGKTVTYVKFVDGGTVVSASTDGSLKMWKTEE   ARVVRTYEGHVNGRSFVGLSV
Sbjct: 243 VFEGHGKTVTYVKFVDGGTVVSASTDGSLKMWKTEE---ARVVRTYEGHVNGRSFVGLSV 302

Query: 304 WREGGLIGCGSEDKRVFVYDKRWGE 324
           WR GGLIGCGSEDKRVFVYDKRWGE
Sbjct: 303 WRNGGLIGCGSEDKRVFVYDKRWGE 323

[Close]

BLAST of CsGy3G044963 vs. NCBI nr
Match: XP_022952662.1 (WD repeat-containing protein RUP2-like [Cucurbita moschata])

HSP 1 Score: 516 bits (1330), Expect = 5.08e-182
Identity = 255/303 (84.16%), Postives = 270/303 (89.11%), Query Frame = 0


Query: 27  TPLRCEWDFTLASVVSSPTNCA-ASDTLGVVEFDPSDSLIATAGIARKIRGYRLHNLLPQ 86
           TPLR EW F+LASVVSS +    ASDTLGVVEFDPSDSLIATAGIARKIRGY L NLLP 
Sbjct: 6   TPLRREWTFSLASVVSSSSLIGPASDTLGVVEFDPSDSLIATAGIARKIRGYSLSNLLP- 65

Query: 87  DIDHNATITQLDHTRASDFCICTPAKLSSLRWKPNANGRILGSGDYDGVVMEYDLEMKVP 146
              H+ T+  LDH+RAS+FCICTPAKLSSLRWKP A GRILGSGDYDGVVMEYDLE KVP
Sbjct: 66  ---HDGTVAMLDHSRASEFCICTPAKLSSLRWKPGAGGRILGSGDYDGVVMEYDLEKKVP 125

Query: 147 IFERDEHGGRRVWSVDYSTVEPVVGASGSDDGTVQVWDTRCESGECVAVVQPSVVRSAVC 206
           +FERDEHGGRRVWS+DYSTV+P+VGASGSDDGTVQVWDTRC+  +CVAVVQPSVVRS VC
Sbjct: 126 VFERDEHGGRRVWSLDYSTVDPMVGASGSDDGTVQVWDTRCDGVDCVAVVQPSVVRSPVC 185

Query: 207 CVEFNPFGGGLVAVGCADRKAYGYDRRKMREPVVVFEGHGKTVTYVKFVDGGTVVSASTD 266
           CVEFNP+GG LV VGCADRKAYGYDRRKM E V+VFEGH KTVTYVKFVDGGT+VSASTD
Sbjct: 186 CVEFNPYGGALVVVGCADRKAYGYDRRKMTEAVMVFEGHAKTVTYVKFVDGGTIVSASTD 245

Query: 267 GSLKMWKTEEGG----GARVVRTYEGHVNGRSFVGLSVWREGGLIGCGSEDKRVFVYDKR 324
           GSLKMWK EEGG    GARVVRTYEGHVNGRSFVGLSVWR GGLIGCGSEDKRVFVYDKR
Sbjct: 246 GSLKMWKAEEGGDGGGGARVVRTYEGHVNGRSFVGLSVWRNGGLIGCGSEDKRVFVYDKR 304

[Close]

BLAST of CsGy3G044963 vs. ExPASy TrEMBL
Match: A0A0A0LHK2 (Ubiquitin ligase protein cop1 OS=Cucumis sativus OX=3659 GN=Csa_3G914590 PE=4 SV=1)

HSP 1 Score: 662 bits (1709), Expect = 1.33e-239
Identity = 324/324 (100.00%), Postives = 324/324 (100.00%), Query Frame = 0


Query: 1   MRSSLSSPSSPTPQIQNSEKLTQQSPTPLRCEWDFTLASVVSSPTNCAASDTLGVVEFDP 60
           MRSSLSSPSSPTPQIQNSEKLTQQSPTPLRCEWDFTLASVVSSPTNCAASDTLGVVEFDP
Sbjct: 1   MRSSLSSPSSPTPQIQNSEKLTQQSPTPLRCEWDFTLASVVSSPTNCAASDTLGVVEFDP 60

Query: 61  SDSLIATAGIARKIRGYRLHNLLPQDIDHNATITQLDHTRASDFCICTPAKLSSLRWKPN 120
           SDSLIATAGIARKIRGYRLHNLLPQDIDHNATITQLDHTRASDFCICTPAKLSSLRWKPN
Sbjct: 61  SDSLIATAGIARKIRGYRLHNLLPQDIDHNATITQLDHTRASDFCICTPAKLSSLRWKPN 120

Query: 121 ANGRILGSGDYDGVVMEYDLEMKVPIFERDEHGGRRVWSVDYSTVEPVVGASGSDDGTVQ 180
           ANGRILGSGDYDGVVMEYDLEMKVPIFERDEHGGRRVWSVDYSTVEPVVGASGSDDGTVQ
Sbjct: 121 ANGRILGSGDYDGVVMEYDLEMKVPIFERDEHGGRRVWSVDYSTVEPVVGASGSDDGTVQ 180

Query: 181 VWDTRCESGECVAVVQPSVVRSAVCCVEFNPFGGGLVAVGCADRKAYGYDRRKMREPVVV 240
           VWDTRCESGECVAVVQPSVVRSAVCCVEFNPFGGGLVAVGCADRKAYGYDRRKMREPVVV
Sbjct: 181 VWDTRCESGECVAVVQPSVVRSAVCCVEFNPFGGGLVAVGCADRKAYGYDRRKMREPVVV 240

Query: 241 FEGHGKTVTYVKFVDGGTVVSASTDGSLKMWKTEEGGGARVVRTYEGHVNGRSFVGLSVW 300
           FEGHGKTVTYVKFVDGGTVVSASTDGSLKMWKTEEGGGARVVRTYEGHVNGRSFVGLSVW
Sbjct: 241 FEGHGKTVTYVKFVDGGTVVSASTDGSLKMWKTEEGGGARVVRTYEGHVNGRSFVGLSVW 300

Query: 301 REGGLIGCGSEDKRVFVYDKRWGE 324
           REGGLIGCGSEDKRVFVYDKRWGE
Sbjct: 301 REGGLIGCGSEDKRVFVYDKRWGE 324

[Close]

BLAST of CsGy3G044963 vs. ExPASy TrEMBL
Match: A0A5A7T553 (WD repeat-containing protein RUP2-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold92G00140 PE=4 SV=1)

HSP 1 Score: 619 bits (1597), Expect = 1.07e-222
Identity = 306/322 (95.03%), Postives = 311/322 (96.58%), Query Frame = 0


Query: 4   SLSSPSSPTPQIQNSEKLTQQSPTPLRCEWDFTLASVVSSPTNCAASDTLGVVEFDPSDS 63
           S+SSPSSPTPQ QN EKL QQSP P  CEWDFTLASVVSSPTNCAASDTLGV+EFDPSDS
Sbjct: 3   SVSSPSSPTPQNQNPEKLKQQSPLP--CEWDFTLASVVSSPTNCAASDTLGVLEFDPSDS 62

Query: 64  LIATAGIARKIRGYRLHNLLPQDIDHNAT-ITQLDHTRASDFCICTPAKLSSLRWKPNAN 123
           LIATAGIARKIRGYRLHNLLPQDI HNAT ITQLDH+RASDFCICTPAKLSSLRWKPNAN
Sbjct: 63  LIATAGIARKIRGYRLHNLLPQDIHHNATTITQLDHSRASDFCICTPAKLSSLRWKPNAN 122

Query: 124 GRILGSGDYDGVVMEYDLEMKVPIFERDEHGGRRVWSVDYSTVEPVVGASGSDDGTVQVW 183
            RILGSGDYDGVV EYDLEMKVPIFERDEHGGRRVWSVDYSTVEPVVGASGSDDGTVQVW
Sbjct: 123 ARILGSGDYDGVVTEYDLEMKVPIFERDEHGGRRVWSVDYSTVEPVVGASGSDDGTVQVW 182

Query: 184 DTRCESGECVAVVQPSVVRSAVCCVEFNPFGGGLVAVGCADRKAYGYDRRKMREPVVVFE 243
           DTRCESGECVAVVQPSVVRS VCCVEFNP+GGGLVAVGCADRKAYGYDRRKMREPVVVFE
Sbjct: 183 DTRCESGECVAVVQPSVVRSPVCCVEFNPYGGGLVAVGCADRKAYGYDRRKMREPVVVFE 242

Query: 244 GHGKTVTYVKFVDGGTVVSASTDGSLKMWKTEEGGGARVVRTYEGHVNGRSFVGLSVWRE 303
           GHGKTVTYVKFVDGGTVVSASTDGSLKMWKTEEGGGARVVRTYEGHVNGRSFVGLSVWR+
Sbjct: 243 GHGKTVTYVKFVDGGTVVSASTDGSLKMWKTEEGGGARVVRTYEGHVNGRSFVGLSVWRK 302

Query: 304 GGLIGCGSEDKRVFVYDKRWGE 324
           GGLIGCGSEDKRVFVYDKRWGE
Sbjct: 303 GGLIGCGSEDKRVFVYDKRWGE 322

[Close]

BLAST of CsGy3G044963 vs. ExPASy TrEMBL
Match: A0A6J1GKZ5 (WD repeat-containing protein RUP2-like OS=Cucurbita moschata OX=3662 GN=LOC111455289 PE=4 SV=1)

HSP 1 Score: 516 bits (1330), Expect = 2.46e-182
Identity = 255/303 (84.16%), Postives = 270/303 (89.11%), Query Frame = 0


Query: 27  TPLRCEWDFTLASVVSSPTNCA-ASDTLGVVEFDPSDSLIATAGIARKIRGYRLHNLLPQ 86
           TPLR EW F+LASVVSS +    ASDTLGVVEFDPSDSLIATAGIARKIRGY L NLLP 
Sbjct: 6   TPLRREWTFSLASVVSSSSLIGPASDTLGVVEFDPSDSLIATAGIARKIRGYSLSNLLP- 65

Query: 87  DIDHNATITQLDHTRASDFCICTPAKLSSLRWKPNANGRILGSGDYDGVVMEYDLEMKVP 146
              H+ T+  LDH+RAS+FCICTPAKLSSLRWKP A GRILGSGDYDGVVMEYDLE KVP
Sbjct: 66  ---HDGTVAMLDHSRASEFCICTPAKLSSLRWKPGAGGRILGSGDYDGVVMEYDLEKKVP 125

Query: 147 IFERDEHGGRRVWSVDYSTVEPVVGASGSDDGTVQVWDTRCESGECVAVVQPSVVRSAVC 206
           +FERDEHGGRRVWS+DYSTV+P+VGASGSDDGTVQVWDTRC+  +CVAVVQPSVVRS VC
Sbjct: 126 VFERDEHGGRRVWSLDYSTVDPMVGASGSDDGTVQVWDTRCDGVDCVAVVQPSVVRSPVC 185

Query: 207 CVEFNPFGGGLVAVGCADRKAYGYDRRKMREPVVVFEGHGKTVTYVKFVDGGTVVSASTD 266
           CVEFNP+GG LV VGCADRKAYGYDRRKM E V+VFEGH KTVTYVKFVDGGT+VSASTD
Sbjct: 186 CVEFNPYGGALVVVGCADRKAYGYDRRKMTEAVMVFEGHAKTVTYVKFVDGGTIVSASTD 245

Query: 267 GSLKMWKTEEGG----GARVVRTYEGHVNGRSFVGLSVWREGGLIGCGSEDKRVFVYDKR 324
           GSLKMWK EEGG    GARVVRTYEGHVNGRSFVGLSVWR GGLIGCGSEDKRVFVYDKR
Sbjct: 246 GSLKMWKAEEGGDGGGGARVVRTYEGHVNGRSFVGLSVWRNGGLIGCGSEDKRVFVYDKR 304

[Close]

BLAST of CsGy3G044963 vs. ExPASy TrEMBL
Match: A0A6J1I327 (WD repeat-containing protein RUP2-like OS=Cucurbita maxima OX=3661 GN=LOC111470535 PE=4 SV=1)

HSP 1 Score: 510 bits (1314), Expect = 6.47e-180
Identity = 252/303 (83.17%), Postives = 268/303 (88.45%), Query Frame = 0


Query: 26  PTPLRCEWDFTLASVVSSPTNCAASDTLGVVEFDPSDSLIATAGIARKIRGYRLHNLLPQ 85
           PTPLR EW F+LASVVSS     ASDTLGVVEFDPSDSLIATAGIARKIRGY L +LLP 
Sbjct: 5   PTPLRREWSFSLASVVSSSLIGPASDTLGVVEFDPSDSLIATAGIARKIRGYSLSSLLP- 64

Query: 86  DIDHNATITQLDHTRASDFCICTPAKLSSLRWKPNANGRILGSGDYDGVVMEYDLEMKVP 145
              H+ T+  LDH+RA +FCICTPAKLSSLRWKP   GRILGSGDYDGVVMEYDLE KVP
Sbjct: 65  ---HDGTVALLDHSRACEFCICTPAKLSSLRWKPGGGGRILGSGDYDGVVMEYDLEKKVP 124

Query: 146 IFERDEHGGRRVWSVDYSTVEPVVGASGSDDGTVQVWDTRCESGECVAVVQPSVVRSAVC 205
           +FERDEHGGRRVWS+DYSTV+P+VGASGSDDGTVQVWDTRC+  +CVAVVQPS+VRS VC
Sbjct: 125 VFERDEHGGRRVWSLDYSTVDPMVGASGSDDGTVQVWDTRCDGVDCVAVVQPSMVRSPVC 184

Query: 206 CVEFNPFGGGLVAVGCADRKAYGYDRRKMREPVVVFEGHGKTVTYVKFVDGGTVVSASTD 265
           CVEFNP+GG LV VGCADRKAYGYDRRKM E V+VFEGH KTVTYVKFVDGGT+VSASTD
Sbjct: 185 CVEFNPYGGALVVVGCADRKAYGYDRRKMTEAVMVFEGHAKTVTYVKFVDGGTIVSASTD 244

Query: 266 GSLKMWKTEEGG--GAR--VVRTYEGHVNGRSFVGLSVWREGGLIGCGSEDKRVFVYDKR 324
           GSLKMWK EEGG  GAR  VVRTYEGHVNGRSFVGLSVWR GGLIGCGSEDKRVFVYDKR
Sbjct: 245 GSLKMWKAEEGGDGGARAGVVRTYEGHVNGRSFVGLSVWRNGGLIGCGSEDKRVFVYDKR 303

[Close]

BLAST of CsGy3G044963 vs. ExPASy TrEMBL
Match: A0A5N6QZY3 (WD_REPEATS_REGION domain-containing protein OS=Carpinus fangiana OX=176857 GN=FH972_008312 PE=4 SV=1)

HSP 1 Score: 446 bits (1148), Expect = 4.69e-154
Identity = 210/295 (71.19%), Postives = 241/295 (81.69%), Query Frame = 0


Query: 30  RCEWDFTLASVVSSPTNCAASDTLGVVEFDPSDSLIATAGIARKIRGYRLHNLLPQDIDH 89
           RCEWDF L+++VSS T  A +DTLGV+EFDPSDS +AT GIARKIR Y L +LL  +  +
Sbjct: 52  RCEWDFNLSTIVSSDTAGAGTDTLGVIEFDPSDSFVATGGIARKIRFYSLSSLLAHESSN 111

Query: 90  NATITQLDHTRASDFCICTPAKLSSLRWKPNANGRILGSGDYDGVVMEYDLEMKVPIFER 149
           N + T LDH  A DFCICTPAKLSSL+WKP ++GRILGSGDYDGVVMEYDLE ++P+FER
Sbjct: 112 NNSTTSLDHAGACDFCICTPAKLSSLKWKPGSDGRILGSGDYDGVVMEYDLERRIPVFER 171

Query: 150 DEHGGRRVWSVDYSTVEPVVGASGSDDGTVQVWDTRCESGECVAVVQPSVVRSAVCCVEF 209
           DEHGGRRVWSVDYS  +PV+GASGSDDGT+Q+WD RCE G+CVA VQPS  RS VCCVEF
Sbjct: 172 DEHGGRRVWSVDYSRWDPVMGASGSDDGTMQMWDPRCEGGKCVATVQPSARRSPVCCVEF 231

Query: 210 NPFGGGLVAVGCADRKAYGYDRRKMREPVVVFEGHGKTVTYVKFVDGGTVVSASTDGSLK 269
           NP GG LVAVGCADR+AY YD RKM +PVVVF+GH KTVTYV+F+D  T+VSA TDG L 
Sbjct: 232 NPVGGALVAVGCADRRAYVYDIRKMVDPVVVFDGHDKTVTYVRFLDAHTMVSAGTDGCLN 291

Query: 270 MWKTEEGGGARVVRTYEGHVNGRSFVGLSVWREGGLIGCGSEDKRVFVYDKRWGE 324
            W   E   ARV+RTY+GHVN RSFVGLSVWR GGL+GCGSE   VFVYD+RW E
Sbjct: 292 TWSINE---ARVIRTYKGHVNNRSFVGLSVWRNGGLLGCGSESNEVFVYDRRWSE 343

[Close]

BLAST of CsGy3G044963 vs. TAIR 10
Match: AT5G23730.1 (Transducin/WD40 repeat-like superfamily protein )

HSP 1 Score: 394.8 bits (1013), Expect = 6.6e-110
Identity = 191/315 (60.63%), Postives = 239/315 (75.87%), Query Frame = 0


Query: 13  PQIQNSEKLTQQSPTPLRCEWDFTLASVVSSPTNCAASDTLGVVEFDPSDSLIATAGIAR 72
           P  Q  E+  QQ     R EWD +L++VVSS ++ +ASD +G +EFDP+D+++ATAGI+R
Sbjct: 6   PHKQQQEQAQQQEEA--RYEWDLSLSTVVSS-SSSSASDVIGAIEFDPTDNIVATAGISR 65

Query: 73  KIRGYRLHNLLPQDIDHNATITQLDHTRASDFCICTPAKLSSLRWKPNANGRILGSGDYD 132
           KIR Y L +LL  +      ++ +D   A ++ ICTPAKLSSLRW+P + GR++GSGDYD
Sbjct: 66  KIRFYGLPSLLRNNAVSGTGVSFVDQATACEYYICTPAKLSSLRWRPGSGGRVIGSGDYD 125

Query: 133 GVVMEYDLEMKVPIFERDEHGGRRVWSVDYST--VEPVVGASGSDDGTVQVWDTRCESGE 192
           GVVMEYDLE + P+FERDEHGGRRVWSVDY+       VGASGSDDGT+QVWD RC   E
Sbjct: 126 GVVMEYDLEKRTPVFERDEHGGRRVWSVDYTRHGGASTVGASGSDDGTMQVWDPRCPPEE 185

Query: 193 CVAVVQPS-VVRSAVCCVEFNPFGGGLVAVGCADRKAYGYDRRKMREPVVVFEGHGKTVT 252
            V VV+P+ + RSAVCCVEF+P GG  VAVGCADRK Y YD RK+ +P +  +GH KTV+
Sbjct: 186 SVGVVRPAGICRSAVCCVEFDPSGGPAVAVGCADRKGYVYDIRKLVDPALTLQGHTKTVS 245

Query: 253 YVKFVDGGTVVSASTDGSLKMWKTEEGGGARVVRTYEGHVNGRSFVGLSVWREGGLIGCG 312
           YV+F+DGGTVV+A TDG LK+W  E+G   RV+RTYEGHVN R+FVGLSVWR G L GCG
Sbjct: 246 YVRFLDGGTVVTAGTDGCLKLWSVEDG---RVIRTYEGHVNNRNFVGLSVWRNGALFGCG 305

Query: 313 SEDKRVFVYDKRWGE 325
           SE+ RVFVYD+RWG+
Sbjct: 306 SENNRVFVYDRRWGK 314

[Close]

BLAST of CsGy3G044963 vs. TAIR 10
Match: AT5G52250.1 (Transducin/WD40 repeat-like superfamily protein )

HSP 1 Score: 357.1 bits (915), Expect = 1.5e-98
Identity = 184/330 (55.76%), Postives = 234/330 (70.91%), Query Frame = 0


Query: 3   SSLSSPSSPT-PQIQNSEKLTQQSPTPL------RCEWDFTLASVVSSPTNCAASDTLGV 62
           + LSS SS T P I  S   +  SPT +      RC+WD +L++VVSS +    SD +G 
Sbjct: 19  NDLSSSSSYTWPMIMTSSSSSSSSPTIMNIENIPRCDWDLSLSAVVSSAS--TGSDAIGA 78

Query: 63  VEFDPSDSLIATAGIARKIRGYRLHNLLPQDIDHNATITQLDHTRASDFCICTPAKLSSL 122
           +EFDP+  +IAT GIARKIR YRL +LL          ++ DH  AS+  ICTPAKLSSL
Sbjct: 79  IEFDPTGEIIATGGIARKIRSYRLSSLLE---------SRDDHVTASESYICTPAKLSSL 138

Query: 123 RWKPNANGRILGSGDYDGVVMEYDLEMKVPIFERDEHGGRRVWSVDYSTVE-PVVGASGS 182
           +W+P+ +GR++GSGDYDGVV EYD+E +VP+ ERDEHGGRR+WSVDY+     ++GASGS
Sbjct: 139 KWRPDFSGRVIGSGDYDGVVTEYDVEKQVPVSERDEHGGRRIWSVDYTLYNGSLIGASGS 198

Query: 183 DDGTVQVWDTRCESGECVAVVQPSVVRSAVCCVEFNPFGGGLVAVGCADRKAYGYDRRKM 242
           DDGTVQ+WD R   G     V+P    +A+C VEF+PFGG  +AVGCADR AY YD R++
Sbjct: 199 DDGTVQMWDPR-NGGTLEETVRPG-GGAAICSVEFDPFGGSSIAVGCADRNAYVYDIRRL 258

Query: 243 REPVVVFEGHGKTVTYVKFVDGGTVVSASTDGSLKMWKTEEGGGARVVRTYEGHVNGRSF 302
            +P++V +GH KTVTY +F+D  T+V+ STDGSLK W  +   G RVVRTY GHVN R+F
Sbjct: 259 VDPLIVLDGHTKTVTYARFMDSHTIVTGSTDGSLKQWDID--NGRRVVRTYRGHVNSRNF 318

Query: 303 VGLSVWREGGLIGCGSEDKRVFVYDKRWGE 325
           VGLSVWR GGL+  GSE+ +VFVYDKRW E
Sbjct: 319 VGLSVWRHGGLVVSGSENNQVFVYDKRWEE 333

[Close]

BLAST of CsGy3G044963 vs. TAIR 10
Match: AT2G32950.1 (Transducin/WD40 repeat-like superfamily protein )

HSP 1 Score: 184.9 bits (468), Expect = 1.0e-46
Identity = 101/272 (37.13%), Postives = 154/272 (56.62%), Query Frame = 0


Query: 49  ASDTLGVVEFDPSDSLIATAGIARKIRGYRLHNLLPQDIDHNATITQLDHTRASDFCICT 108
           +++ +  +EFD  D L ATAG++R I+ +   +++ +  D    I ++           T
Sbjct: 370 SANIVSSIEFDRDDELFATAGVSRCIKVFDFSSVVNEPADMQCPIVEMS----------T 429

Query: 109 PAKLSSLRWKPNANGRILGSGDYDGVVMEYDLEMKVPIFERDEHGGRRVWSVDYSTVEPV 168
            +KLS L W  +    I  S DY+G+V  +D+  +  + E +EH  +R WSVD+S  EP 
Sbjct: 430 RSKLSCLSWNKHEKNHI-ASSDYEGIVTVWDVTTRQSLMEYEEH-EKRAWSVDFSRTEPS 489

Query: 169 VGASGSDDGTVQVWDTRCESGECVAVVQPSVVRSAVCCVEFNPFGGGLVAVGCADRKAYG 228
           +  SGSDD  V+VW TR E     A V    +++ +CCV++NP     +AVG AD   + 
Sbjct: 490 MLVSGSDDCKVKVWCTRQE-----ASVINIDMKANICCVKYNPGSSNYIAVGSADHHIHY 549

Query: 229 YDRRKMREPVVVFEGHGKTVTYVKFVDGGTVVSASTDGSLKMWKTEEGGGARVVRTYEGH 288
           YD R + +P+ VF GH K V+YVKF+    + SASTD +L++W  ++      VRT+ GH
Sbjct: 550 YDLRNISQPLHVFSGHKKAVSYVKFLSNNELASASTDSTLRLWDVKDN---LPVRTFRGH 609

Query: 289 VNGRSFVGLSVWREGGLIGCGSEDKRVFVYDK 321
            N ++FVGL+V  E   + CGSE   V+VY K
Sbjct: 610 TNEKNFVGLTVNSE--YLACGSETNEVYVYHK 619

[Close]

BLAST of CsGy3G044963 vs. TAIR 10
Match: AT1G53090.1 (SPA1-related 4 )

HSP 1 Score: 166.8 bits (421), Expect = 2.9e-41
Identity = 95/275 (34.55%), Postives = 149/275 (54.18%), Query Frame = 0


Query: 49  ASDTLGVVEFDPSDSLIATAGIARKIRGYRLHNLLPQDIDHNATITQLDHTRASDFCICT 108
           +S+ +  + FD      ATAG+ +KI+ +   +++    D +  + +L           +
Sbjct: 483 SSNLVCAIGFDRDGEFFATAGVNKKIKIFECESIIKDGRDIHYPVVEL----------AS 542

Query: 109 PAKLSSLRWKPNANGRILGSGDYDGVVMEYDLEMKVPIFERDEHGGRRVWSVDYSTVEPV 168
            +KLS + W      ++  S +++GVV  +D+     + E  EH  +RVWS+DYS+ +P 
Sbjct: 543 RSKLSGICWNSYIKSQV-ASSNFEGVVQVWDVARNQLVTEMKEH-EKRVWSIDYSSADPT 602

Query: 169 VGASGSDDGTVQVWDTRCESGECVAVVQPSVVRSAVCCVEFNPFGGGLVAVGCADRKAYG 228
           + ASGSDDG+V++W      G  +  ++    ++ +CCV+F    G  +A G AD K Y 
Sbjct: 603 LLASGSDDGSVKLWS--INQGVSIGTIK---TKANICCVQFPSETGRSLAFGSADHKVYY 662

Query: 229 YDRRKMREPVVVFEGHGKTVTYVKFVDGGTVVSASTDGSLKMWKTE---EGGGARVVRTY 288
           YD R  + P+    GH KTV+YV+FVD  T+VS+STD +LK+W       G     + ++
Sbjct: 663 YDLRNPKLPLCTMIGHHKTVSYVRFVDSSTLVSSSTDNTLKLWDLSMSISGINETPLHSF 722

Query: 289 EGHVNGRSFVGLSVWREGGLIGCGSEDKRVFVYDK 321
            GH N ++FVGLSV    G I  GSE   VFVY K
Sbjct: 723 MGHTNVKNFVGLSV--SDGYIATGSETNEVFVYHK 738

[Close]

BLAST of CsGy3G044963 vs. TAIR 10
Match: AT1G53090.2 (SPA1-related 4 )

HSP 1 Score: 166.8 bits (421), Expect = 2.9e-41
Identity = 95/275 (34.55%), Postives = 149/275 (54.18%), Query Frame = 0


Query: 49  ASDTLGVVEFDPSDSLIATAGIARKIRGYRLHNLLPQDIDHNATITQLDHTRASDFCICT 108
           +S+ +  + FD      ATAG+ +KI+ +   +++    D +  + +L           +
Sbjct: 483 SSNLVCAIGFDRDGEFFATAGVNKKIKIFECESIIKDGRDIHYPVVEL----------AS 542

Query: 109 PAKLSSLRWKPNANGRILGSGDYDGVVMEYDLEMKVPIFERDEHGGRRVWSVDYSTVEPV 168
            +KLS + W      ++  S +++GVV  +D+     + E  EH  +RVWS+DYS+ +P 
Sbjct: 543 RSKLSGICWNSYIKSQV-ASSNFEGVVQVWDVARNQLVTEMKEH-EKRVWSIDYSSADPT 602

Query: 169 VGASGSDDGTVQVWDTRCESGECVAVVQPSVVRSAVCCVEFNPFGGGLVAVGCADRKAYG 228
           + ASGSDDG+V++W      G  +  ++    ++ +CCV+F    G  +A G AD K Y 
Sbjct: 603 LLASGSDDGSVKLWS--INQGVSIGTIK---TKANICCVQFPSETGRSLAFGSADHKVYY 662

Query: 229 YDRRKMREPVVVFEGHGKTVTYVKFVDGGTVVSASTDGSLKMWKTE---EGGGARVVRTY 288
           YD R  + P+    GH KTV+YV+FVD  T+VS+STD +LK+W       G     + ++
Sbjct: 663 YDLRNPKLPLCTMIGHHKTVSYVRFVDSSTLVSSSTDNTLKLWDLSMSISGINETPLHSF 722

Query: 289 EGHVNGRSFVGLSVWREGGLIGCGSEDKRVFVYDK 321
            GH N ++FVGLSV    G I  GSE   VFVY K
Sbjct: 723 MGHTNVKNFVGLSV--SDGYIATGSETNEVFVYHK 738

The following BLAST results are available for this feature:

BLAST of CsGy3G044963 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FFA7	9.3e-109	60.63	WD repeat-containing protein RUP2 OS=Arabidopsis thaliana OX=3702 GN=RUP2 PE=1 S...	[more]
Q9LTJ6	2.1e-97	55.76	WD repeat-containing protein RUP1 OS=Arabidopsis thaliana OX=3702 GN=RUP1 PE=1 S...	[more]
P93471	1.1e-45	37.50	E3 ubiquitin-protein ligase COP1 OS=Pisum sativum OX=3888 GN=COP1 PE=2 SV=1	[more]
P43254	1.5e-45	37.13	E3 ubiquitin-protein ligase COP1 OS=Arabidopsis thaliana OX=3702 GN=COP1 PE=1 SV...	[more]
Q9LJR3	1.1e-40	33.83	Protein SPA1-RELATED 3 OS=Arabidopsis thaliana OX=3702 GN=SPA3 PE=1 SV=1	[more]

BLAST of CsGy3G044963 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004148378.3	2.26e-238	99.69	LOW QUALITY PROTEIN: WD repeat-containing protein RUP2 [Cucumis sativus]	[more]
KAE8651477.1	1.85e-222	100.00	hypothetical protein Csa_002658 [Cucumis sativus]	[more]
KAA0038490.1	2.21e-222	95.03	WD repeat-containing protein RUP2-like [Cucumis melo var. makuwa]	[more]
XP_038887335.1	8.67e-199	86.46	WD repeat-containing protein RUP2-like [Benincasa hispida]	[more]
XP_022952662.1	5.08e-182	84.16	WD repeat-containing protein RUP2-like [Cucurbita moschata]	[more]

BLAST of CsGy3G044963 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LHK2	1.33e-239	100.00	Ubiquitin ligase protein cop1 OS=Cucumis sativus OX=3659 GN=Csa_3G914590 PE=4 SV...	[more]
A0A5A7T553	1.07e-222	95.03	WD repeat-containing protein RUP2-like OS=Cucumis melo var. makuwa OX=1194695 GN...	[more]
A0A6J1GKZ5	2.46e-182	84.16	WD repeat-containing protein RUP2-like OS=Cucurbita moschata OX=3662 GN=LOC11145...	[more]
A0A6J1I327	6.47e-180	83.17	WD repeat-containing protein RUP2-like OS=Cucurbita maxima OX=3661 GN=LOC1114705...	[more]
A0A5N6QZY3	4.69e-154	71.19	WD_REPEATS_REGION domain-containing protein OS=Carpinus fangiana OX=176857 GN=FH...	[more]

BLAST of CsGy3G044963 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G23730.1	6.6e-110	60.63	Transducin/WD40 repeat-like superfamily protein	[more]
AT5G52250.1	1.5e-98	55.76	Transducin/WD40 repeat-like superfamily protein	[more]
AT2G32950.1	1.0e-46	37.13	Transducin/WD40 repeat-like superfamily protein	[more]
AT1G53090.1	2.9e-41	34.55	SPA1-related 4	[more]
AT1G53090.2	2.9e-41	34.55	SPA1-related 4	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (Gy14) v2.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001680	WD40 repeat	SMART	SM00320	WD40_4	coord: 188..230 e-value: 0.052 score: 22.7 coord: 278..319 e-value: 0.99 score: 17.0 coord: 234..272 e-value: 1.7E-5 score: 34.3 coord: 142..183 e-value: 0.036 score: 23.2 coord: 102..139 e-value: 25.0 score: 8.1 coord: 34..78 e-value: 260.0 score: 1.7
IPR001680	WD40 repeat	PFAM	PF00400	WD40	coord: 236..272 e-value: 5.3E-4 score: 20.7 coord: 151..183 e-value: 0.0061 score: 17.4
IPR001680	WD40 repeat	PROSITE	PS50082	WD_REPEATS_2	coord: 171..185 score: 8.770704
IPR001680	WD40 repeat	PROSITE	PS50082	WD_REPEATS_2	coord: 241..281 score: 10.608706
IPR015943	WD40/YVTN repeat-like-containing domain superfamily	GENE3D	2.130.10.10		coord: 33..324 e-value: 6.9E-74 score: 250.7
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..26
None	No IPR available	PROSITE	PS50294	WD_REPEATS_REGION	coord: 241..276 score: 8.676514
IPR044616	WD repeat-containing protein RUP1/2	PANTHER	PTHR45389	WD REPEAT-CONTAINING PROTEIN RUP1	coord: 11..324
IPR036322	WD40-repeat-containing domain superfamily	SUPERFAMILY	50978	WD40 repeat-like	coord: 53..320

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsGy3G044963.1	CsGy3G044963.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0010224	response to UV-B
molecular_function	GO:0016874	ligase activity
molecular_function	GO:0005515	protein binding