CsGy3G041470 (gene) Cucumber (Gy14) v2.1
Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CACTGGTTGCAAATTGCTCTGTTACTCTCATTTTCTGTCTCCTGCCCATAACGTGTTTGTTGATTTGCTTGGAATAAACTTTGGCGTCTGTGGCGGCGGATATTTTTGCAGATTTGTACAACCCAATTGTTGTATGTATGTGGGTTATTTGGCTTGTGTTTGTTGGTTCAAACATGCTTTGAAACCCCATATCTTTTTTTGGTTGTCCGTAATTTGTTTGATGATTTGCCTGAAAGGAGTTGTAGATTTGTATTTCTCTGCTGTAAATGTATGCATTGCTTGTGTTTGTTGGTTCAAATGAAGTTATGAAAAAGTGAATTTTCCCGTTTTCTTTCTTATGCCTTCAACGAAGTTTGATGGCCATTAGGCATGCTTAATTGTTTCTGCTCTACATTGCACATTGAGCCTATATTCTTATATTGTTCATGTGATTATTTCTTTGTAGGAAGAGAAGGGTGTGGCTAGGGACATTCGACACGGCGGAGGATGCAGCACGAGCGTACGATCAAGCAGCCATTTTAATGAATGGCCAAAACGCCAAGACCAATTTCCCTGCATCAAAAGACCACTCTGAAGAAGCCAGCCATGGCCATGGTTCTTCTCCAATGTCTCCAAAAGCACTTTCGGAGCTACTCAGCACAAAGCTCAGAAAGTGCTGCAAGAACCCATCTCCTTCCTTGACATGCCTACGACTCGACTGTGACAACGCTCATATCGGTGTATGGCAGAAGCGTGCAGGCACTCGAGCCACTTCCAATTGGGTCATGAGGATTGAGCTAGGGAAGAAAGAGGTACCTTCGCCTGAATCGACAAGCCAAGAAGCCGATGGCGATGGCGATGGCGATGGTGATGACCACCAAAATGAAATTGATGAAGAAGACAGAATTGCAATGCAAATGATTGAAGAGTTACTCAATTGGAACTGCCCTCTTCCTTCAACTTCCAGCTAAGTACAGGATCTCAACACAAAACTCTACTCCCAAAATTTAAAAATAAAAAAATAACACCCATTAGATTAAAACAAAGAGGCTTAATTAATCTGTGTTTGACTGTCTATGTGTGTATGTATATATTCATATATGTTTTTATTCCTATTTTTCTGTTACTTTCAGCTTATATATAAAGCTGTTTATGGGACTTGGGAAGCTCAAAATCTGTATAGAGACGGAGCTTTTGCATATACATAAGTTTGCTGTTTTATGTCATCTTTTGTAATTCACATATATATATTTGGAAAAGGTATATATAATATAAAG CACTGGTTGCAAATTGCTCTGTTACTCTCATTTTCTGTCTCCTGCCCATAACGTGTTTGTTGATTTGCTTGGAATAAACTTTGGCGTCTGTGGCGGCGGATATTTTTGCAGATTTGTACAACCCAATTGTTGAAGAGAAGGGTGTGGCTAGGGACATTCGACACGGCGGAGGATGCAGCACGAGCGTACGATCAAGCAGCCATTTTAATGAATGGCCAAAACGCCAAGACCAATTTCCCTGCATCAAAAGACCACTCTGAAGAAGCCAGCCATGGCCATGGTTCTTCTCCAATGTCTCCAAAAGCACTTTCGGAGCTACTCAGCACAAAGCTCAGAAAGTGCTGCAAGAACCCATCTCCTTCCTTGACATGCCTACGACTCGACTGTGACAACGCTCATATCGGTGTATGGCAGAAGCGTGCAGGCACTCGAGCCACTTCCAATTGGGTCATGAGGATTGAGCTAGGGAAGAAAGAGGTACCTTCGCCTGAATCGACAAGCCAAGAAGCCGATGGCGATGGCGATGGCGATGGTGATGACCACCAAAATGAAATTGATGAAGAAGACAGAATTGCAATGCAAATGATTGAAGAGTTACTCAATTGGAACTGCCCTCTTCCTTCAACTTCCAGCTAAGTACAGGATCTCAACACAAAACTCTACTCCCAAAATTTAAAAATAAAAAAATAACACCCATTAGATTAAAACAAAGAGGCTTAATTAATCTGTGTTTGACTGTCTATGTGTGTATGTATATATTCATATATGTTTTTATTCCTATTTTTCTGTTACTTTCAGCTTATATATAAAGCTGTTTATGGGACTTGGGAAGCTCAAAATCTGTATAGAGACGGAGCTTTTGCATATACATAAGTTTGCTGTTTTATGTCATCTTTTGTAATTCACATATATATATTTGGAAAAGGTATATATAATATAAAG ATGAATGGCCAAAACGCCAAGACCAATTTCCCTGCATCAAAAGACCACTCTGAAGAAGCCAGCCATGGCCATGGTTCTTCTCCAATGTCTCCAAAAGCACTTTCGGAGCTACTCAGCACAAAGCTCAGAAAGTGCTGCAAGAACCCATCTCCTTCCTTGACATGCCTACGACTCGACTGTGACAACGCTCATATCGGTGTATGGCAGAAGCGTGCAGGCACTCGAGCCACTTCCAATTGGGTCATGAGGATTGAGCTAGGGAAGAAAGAGGTACCTTCGCCTGAATCGACAAGCCAAGAAGCCGATGGCGATGGCGATGGCGATGGTGATGACCACCAAAATGAAATTGATGAAGAAGACAGAATTGCAATGCAAATGATTGAAGAGTTACTCAATTGGAACTGCCCTCTTCCTTCAACTTCCAGCTAA MNGQNAKTNFPASKDHSEEASHGHGSSPMSPKALSELLSTKLRKCCKNPSPSLTCLRLDCDNAHIGVWQKRAGTRATSNWVMRIELGKKEVPSPESTSQEADGDGDGDGDDHQNEIDEEDRIAMQMIEELLNWNCPLPSTSS* Homology
BLAST of CsGy3G041470 vs. ExPASy Swiss-Prot
Match: Q9XI33 (Ethylene-responsive transcription factor WIN1 OS=Arabidopsis thaliana OX=3702 GN=WIN1 PE=2 SV=1) HSP 1 Score: 127.1 bits (318), Expect = 1.6e-28 Identity = 74/153 (48.37%), Postives = 97/153 (63.40%), Query Frame = 0
BLAST of CsGy3G041470 vs. ExPASy Swiss-Prot
Match: Q9LFN7 (Ethylene-responsive transcription factor SHINE 2 OS=Arabidopsis thaliana OX=3702 GN=SHN2 PE=2 SV=1) HSP 1 Score: 124.8 bits (312), Expect = 7.9e-28 Identity = 74/139 (53.24%), Postives = 94/139 (67.63%), Query Frame = 0
BLAST of CsGy3G041470 vs. ExPASy Swiss-Prot
Match: Q3E958 (Ethylene-responsive transcription factor SHINE 3 OS=Arabidopsis thaliana OX=3702 GN=SHN3 PE=2 SV=1) HSP 1 Score: 124.8 bits (312), Expect = 7.9e-28 Identity = 73/137 (53.28%), Postives = 93/137 (67.88%), Query Frame = 0
BLAST of CsGy3G041470 vs. NCBI nr
Match: XP_004136348.1 (ethylene-responsive transcription factor SHINE 2 [Cucumis sativus] >XP_011652482.1 ethylene-responsive transcription factor SHINE 2 [Cucumis sativus] >KGN60101.1 hypothetical protein Csa_000793 [Cucumis sativus]) HSP 1 Score: 287 bits (734), Expect = 6.73e-97 Identity = 142/142 (100.00%), Postives = 142/142 (100.00%), Query Frame = 0
BLAST of CsGy3G041470 vs. NCBI nr
Match: KAA0038810.1 (ethylene-responsive transcription factor SHINE 2-like [Cucumis melo var. makuwa]) HSP 1 Score: 256 bits (654), Expect = 8.79e-85 Identity = 133/143 (93.01%), Postives = 133/143 (93.01%), Query Frame = 0
BLAST of CsGy3G041470 vs. NCBI nr
Match: XP_008466408.1 (PREDICTED: ethylene-responsive transcription factor SHINE 2-like [Cucumis melo] >XP_008466410.1 PREDICTED: ethylene-responsive transcription factor SHINE 2-like [Cucumis melo] >TYK31433.1 ethylene-responsive transcription factor SHINE 2-like [Cucumis melo var. makuwa]) HSP 1 Score: 253 bits (646), Expect = 1.45e-83 Identity = 132/143 (92.31%), Postives = 132/143 (92.31%), Query Frame = 0
BLAST of CsGy3G041470 vs. NCBI nr
Match: XP_038899932.1 (ethylene-responsive transcription factor SHINE 2-like isoform X4 [Benincasa hispida] >XP_038899933.1 ethylene-responsive transcription factor SHINE 2-like isoform X4 [Benincasa hispida] >XP_038899934.1 ethylene-responsive transcription factor SHINE 2-like isoform X4 [Benincasa hispida]) HSP 1 Score: 249 bits (635), Expect = 7.12e-82 Identity = 129/144 (89.58%), Postives = 131/144 (90.97%), Query Frame = 0
BLAST of CsGy3G041470 vs. NCBI nr
Match: XP_038899931.1 (ethylene-responsive transcription factor SHINE 2-like isoform X3 [Benincasa hispida]) HSP 1 Score: 249 bits (635), Expect = 1.18e-81 Identity = 129/144 (89.58%), Postives = 131/144 (90.97%), Query Frame = 0
BLAST of CsGy3G041470 vs. ExPASy TrEMBL
Match: A0A0A0LJA8 (AP2/ERF domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G878210 PE=4 SV=1) HSP 1 Score: 287 bits (734), Expect = 3.26e-97 Identity = 142/142 (100.00%), Postives = 142/142 (100.00%), Query Frame = 0
BLAST of CsGy3G041470 vs. ExPASy TrEMBL
Match: A0A5A7T6E0 (Ethylene-responsive transcription factor SHINE 2-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold92G003670 PE=4 SV=1) HSP 1 Score: 256 bits (654), Expect = 4.25e-85 Identity = 133/143 (93.01%), Postives = 133/143 (93.01%), Query Frame = 0
BLAST of CsGy3G041470 vs. ExPASy TrEMBL
Match: A0A1S3CR71 (ethylene-responsive transcription factor SHINE 2-like OS=Cucumis melo OX=3656 GN=LOC103503822 PE=4 SV=1) HSP 1 Score: 253 bits (646), Expect = 7.04e-84 Identity = 132/143 (92.31%), Postives = 132/143 (92.31%), Query Frame = 0
BLAST of CsGy3G041470 vs. ExPASy TrEMBL
Match: A0A5D3E5T0 (Ethylene-responsive transcription factor SHINE 2-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold455G007440 PE=4 SV=1) HSP 1 Score: 253 bits (646), Expect = 7.04e-84 Identity = 132/143 (92.31%), Postives = 132/143 (92.31%), Query Frame = 0
BLAST of CsGy3G041470 vs. ExPASy TrEMBL
Match: A0A6J1FE08 (ethylene-responsive transcription factor SHINE 3 isoform X3 OS=Cucurbita moschata OX=3662 GN=LOC111443124 PE=4 SV=1) HSP 1 Score: 241 bits (614), Expect = 2.52e-79 Identity = 125/146 (85.62%), Postives = 128/146 (87.67%), Query Frame = 0
BLAST of CsGy3G041470 vs. TAIR 10
Match: AT1G15360.1 (Integrase-type DNA-binding superfamily protein ) HSP 1 Score: 127.1 bits (318), Expect = 1.1e-29 Identity = 74/153 (48.37%), Postives = 97/153 (63.40%), Query Frame = 0
BLAST of CsGy3G041470 vs. TAIR 10
Match: AT5G25390.1 (Integrase-type DNA-binding superfamily protein ) HSP 1 Score: 124.8 bits (312), Expect = 5.6e-29 Identity = 73/137 (53.28%), Postives = 93/137 (67.88%), Query Frame = 0
BLAST of CsGy3G041470 vs. TAIR 10
Match: AT5G11190.1 (Integrase-type DNA-binding superfamily protein ) HSP 1 Score: 124.8 bits (312), Expect = 5.6e-29 Identity = 74/139 (53.24%), Postives = 94/139 (67.63%), Query Frame = 0
BLAST of CsGy3G041470 vs. TAIR 10
Match: AT5G25390.2 (Integrase-type DNA-binding superfamily protein ) HSP 1 Score: 124.8 bits (312), Expect = 5.6e-29 Identity = 73/137 (53.28%), Postives = 93/137 (67.88%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (Gy14) v2.1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
|