CsGy3G037680 (gene) Cucumber (Gy14) v2.1

Overview


Name	CsGy3G037680
Type	gene
Organism	Cucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
Description	Unknown protein
Location	Gy14Chr3: 35501917 .. 35503222 (-)
RNA-Seq Expression	CsGy3G037680
Synteny	CsGy3G037680

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

CTTCTTCATGCCTACGACGTACGTCCCGTCTCACATGAAATTCTCTCGCTCCCGTTGTCGGTTCGGTTTCAGTTGGATTAACCGATTTTGATCCCACTGTATCTTTTCCAATAACAATGGCTTTTAAATCCGATCTTATGCCCTTCCATTTTGATCTCTTGGTCAGAAAAAGCCCTAGAACTCTTGACCATCCTCCTCTTCTCCGGTTGCTCCACTGGCTCCTCCGTCGCTCCTACTCCTACTTGATGCCCAGAAAAAACGCCGACGTCCTCCTATATTGGTAATTTCAAAATTTGCATTTTTATGTCGCTCTCTCTTTTTACTTTCTCGACTGTTCCTCAACCTAACATCTCTCTCTTCCCTCTTCACTGGTTGCTCCTTCGACCGTCAGCCGCCGTTTCCATCGTCATTCTGTGCCCTAAGAAGTTGCTAACATCCTTTTGCTTTGGTTTTTTAATTTCAGTTTTTGTCAAATCCTCCGTATGCATAAAAATCAGTTCTGAAATATTATTTTCGTTACCTTGAAGAATCAGACTTCAAGATCAGGCCCGCTGATTATCCCCATTACATGTTGGCAGAAAGGAAAAAGAAAAATTCTCTATTTTTTCTCTGTACTATTTATTTAAACTGCAAAATTAATTTCTTTGTCTAAACCATGTGAAGTAGTCAGAGAATAAAAAAAGAAACAAAAGTTTGAAGGTTGGTTAAACTTACTACAATTTGAACGTCTAGTTTCAGGGGAGTTTGGTTTGTCCCCTCTCTCGTTTCTTTTGACAAACCAAAAACCAATCGATGGTGAAACTAACATCCTGATCTTAGCTATTAACCGAAACGTAAAGTTCTGTTCGTATTGAACTTTCAATCGAACTCTTCTCGTTAGCCTTAGAATTAGAGACAATGCACATTATCTATACCTTTCATTCCCTACTCTCTTCTAATGATTTAAATCCACTTTAATAAGTTCTTTCAAACTCTTGTAGGGAAAATCATGAATACTCCATGTGCAGACGAGGTTGAGGTTGCGAATGAGGATGGAAATGTAGATTATGCTACTACGAGAGATGATCAAGACAATAGGAAGCAAGAAGGTAATGTTGATGTTGATGATCCTTATGATGTTGAATGTGAATATTGTGGTGCTTTATATGCCAATCGTTCATAGAGAAATAGAATGGAAAATATGGAAGCACATCCGATTCCGACAACTATCCTATCGATCGTCCTTGGTTGCGGTGGGGCAGAAGATGGATATAAAGAGAATTTGATATTAGAAAGTGAAGAGGAGGACGAGGAGGGTGTAGGGTGA

mRNA sequence

CTTCTTCATGCCTACGACGTACGTCCCGTCTCACATGAAATTCTCTCGCTCCCGTTGTCGGTTCGGTTTCAGTTGGATTAACCGATTTTGATCCCACTGTATCTTTTCCAATAACAATGGCTTTTAAATCCGATCTTATGCCCTTCCATTTTGATCTCTTGGTCAGAAAAAGCCCTAGAACTCTTGACCATCCTCCTCTTCTCCGGTTGCTCCACTGGCTCCTCCGTCGCTCCTACTCCTACTTGATGCCCAGAAAAAACGCCGACGTCCTCCTATATTGGGAAAATCATGAATACTCCATGTGCAGACGAGGTTGAGGTTGCGAATGAGGATGGAAATGTAGATTATGCTACTACGAGAGATGATCAAGACAATAGGAAGCAAGAAGGTAATGTTGATGTTGATGATCCTTATGATGTTGAATGTGAATATTGTGGTGCTTTATATGCCAATCAAGATGGATATAAAGAGAATTTGATATTAGAAAGTGAAGAGGAGGACGAGGAGGGTGTAGGGTGA

Coding sequence (CDS)

ATGAATACTCCATGTGCAGACGAGGTTGAGGTTGCGAATGAGGATGGAAATGTAGATTATGCTACTACGAGAGATGATCAAGACAATAGGAAGCAAGAAGGTAATGTTGATGTTGATGATCCTTATGATGTTGAATGTGAATATTGTGGTGCTTTATATGCCAATCAAGATGGATATAAAGAGAATTTGATATTAGAAAGTGAAGAGGAGGACGAGGAGGGTGTAGGGTGA

Protein sequence

MNTPCADEVEVANEDGNVDYATTRDDQDNRKQEGNVDVDDPYDVECEYCGALYANQDGYKENLILESEEEDEEGVG*

Homology

[Close]

BLAST of CsGy3G037680 vs. NCBI nr
Match: KGN59695.1 (hypothetical protein Csa_002514 [Cucumis sativus])

HSP 1 Score: 156 bits (394), Expect = 6.62e-48
Identity = 76/76 (100.00%), Postives = 76/76 (100.00%), Query Frame = 0


Query: 1  MNTPCADEVEVANEDGNVDYATTRDDQDNRKQEGNVDVDDPYDVECEYCGALYANQDGYK 60
          MNTPCADEVEVANEDGNVDYATTRDDQDNRKQEGNVDVDDPYDVECEYCGALYANQDGYK
Sbjct: 1  MNTPCADEVEVANEDGNVDYATTRDDQDNRKQEGNVDVDDPYDVECEYCGALYANQDGYK 60

Query: 61 ENLILESEEEDEEGVG 76
          ENLILESEEEDEEGVG
Sbjct: 61 ENLILESEEEDEEGVG 76

[Close]

BLAST of CsGy3G037680 vs. NCBI nr
Match: KAA0053643.1 (hypothetical protein E6C27_scaffold135G00140 [Cucumis melo var. makuwa] >TYK00814.1 hypothetical protein E5676_scaffold1545G00150 [Cucumis melo var. makuwa])

HSP 1 Score: 80.5 bits (197), Expect = 7.37e-18
Identity = 51/77 (66.23%), Postives = 56/77 (72.73%), Query Frame = 0


Query: 5  CADEVEVANEDGNVDYATTRDDQDNRKQE----GNVDV-DDPYDVECEYCGALYANQDGY 64
          C DEVEVANED NVDYATTRD QDNRKQE    GN++   + Y  +   CG     +DGY
Sbjct: 2  CRDEVEVANEDENVDYATTRD-QDNRKQEEKLNGNMEAYPENYPTDRLCCGGA---EDGY 61

Query: 65 KENLILESEEEDEEGVG 76
          KENLILESEEEDEEGVG
Sbjct: 62 KENLILESEEEDEEGVG 74

[Close]

BLAST of CsGy3G037680 vs. ExPASy TrEMBL
Match: A0A0A0LCF3 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G838740 PE=4 SV=1)

HSP 1 Score: 156 bits (394), Expect = 3.20e-48
Identity = 76/76 (100.00%), Postives = 76/76 (100.00%), Query Frame = 0


Query: 1  MNTPCADEVEVANEDGNVDYATTRDDQDNRKQEGNVDVDDPYDVECEYCGALYANQDGYK 60
          MNTPCADEVEVANEDGNVDYATTRDDQDNRKQEGNVDVDDPYDVECEYCGALYANQDGYK
Sbjct: 1  MNTPCADEVEVANEDGNVDYATTRDDQDNRKQEGNVDVDDPYDVECEYCGALYANQDGYK 60

Query: 61 ENLILESEEEDEEGVG 76
          ENLILESEEEDEEGVG
Sbjct: 61 ENLILESEEEDEEGVG 76

[Close]

BLAST of CsGy3G037680 vs. ExPASy TrEMBL
Match: A0A5A7UCL3 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1545G00150 PE=4 SV=1)

HSP 1 Score: 80.5 bits (197), Expect = 3.57e-18
Identity = 51/77 (66.23%), Postives = 56/77 (72.73%), Query Frame = 0


Query: 5  CADEVEVANEDGNVDYATTRDDQDNRKQE----GNVDV-DDPYDVECEYCGALYANQDGY 64
          C DEVEVANED NVDYATTRD QDNRKQE    GN++   + Y  +   CG     +DGY
Sbjct: 2  CRDEVEVANEDENVDYATTRD-QDNRKQEEKLNGNMEAYPENYPTDRLCCGGA---EDGY 61

Query: 65 KENLILESEEEDEEGVG 76
          KENLILESEEEDEEGVG
Sbjct: 62 KENLILESEEEDEEGVG 74

The following BLAST results are available for this feature:

BLAST of CsGy3G037680 vs.


Match Name	E-value	Identity	Description

BLAST of CsGy3G037680 vs. NCBI nr


Match Name	E-value	Identity	Description
KGN59695.1	6.62e-48	100.00	hypothetical protein Csa_002514 [Cucumis sativus]	[more]
KAA0053643.1	7.37e-18	66.23	hypothetical protein E6C27_scaffold135G00140 [Cucumis melo var. makuwa] >TYK0081...	[more]

BLAST of CsGy3G037680 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LCF3	3.20e-48	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G838740 PE=4 SV=1	[more]
A0A5A7UCL3	3.57e-18	66.23	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]

BLAST of CsGy3G037680 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Cucumber (Gy14) v2.1
Date Performed: 2021-10-25

Position :

Zoom :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 19..38
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..41

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsGy3G037680.2	CsGy3G037680.2	mRNA