CsGy3G037450 (gene) Cucumber (Gy14) v2.1

Overview
NameCsGy3G037450
Typegene
OrganismCucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
DescriptionUnknown protein
LocationGy14Chr3: 35321262 .. 35321531 (-)
RNA-Seq ExpressionCsGy3G037450
SyntenyCsGy3G037450
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCCACGGTGCTCCACCTTCATTCCGCCGCCATCCTCAACCGCAATTCTCAGTCAGTGAAATTTTCCTCATCGCCGGTGGCGGAATTGACCGAATGTCAGAGGGATTTGCAGTTTTTCCGATGGGTTGCCGTCGGGCCCAATCTATTTGGTGTCAGGGCTCTGTTTGCTTGGGTCTAGTTATGGTTGAATGAGCTTCTCGCCAGGCCGAATTCAAGCCCAATTAATGTTTCGGCCCATTATCCAAAGGCAAGCATTTCCGAATATTGA

mRNA sequence

ATGGCCACGGTGCTCCACCTTCATTCCGCCGCCATCCTCAACCGCAATTCTCAGTCAGTGAAATTTTCCTCATCGCCGGTGGCGGAATTGACCGAATGTCAGAGGGATTTGCAGTTTTTCCGATGGGTTGCCGTCGGGCCCAATCTATTTGGTGTCAGGGCTCTGCCGAATTCAAGCCCAATTAATGTTTCGGCCCATTATCCAAAGGCAAGCATTTCCGAATATTGA

Coding sequence (CDS)

ATGGCCACGGTGCTCCACCTTCATTCCGCCGCCATCCTCAACCGCAATTCTCAGTCAGTGAAATTTTCCTCATCGCCGGTGGCGGAATTGACCGAATGTCAGAGGGATTTGCAGTTTTTCCGATGGGTTGCCGTCGGGCCCAATCTATTTGGTGTCAGGGCTCTGCCGAATTCAAGCCCAATTAATGTTTCGGCCCATTATCCAAAGGCAAGCATTTCCGAATATTGA

Protein sequence

MATVLHLHSAAILNRNSQSVKFSSSPVAELTECQRDLQFFRWVAVGPNLFGVRALPNSSPINVSAHYPKASISEY*
Homology
[Close]
BLAST of CsGy3G037450 vs. NCBI nr
Match: KGN59669.1 (hypothetical protein Csa_002539 [Cucumis sativus])

HSP 1 Score: 152 bits (384), Expect = 2.07e-46
Identity = 75/75 (100.00%), Postives = 75/75 (100.00%), Query Frame = 0 

Query: 1  MATVLHLHSAAILNRNSQSVKFSSSPVAELTECQRDLQFFRWVAVGPNLFGVRALPNSSP 60
          MATVLHLHSAAILNRNSQSVKFSSSPVAELTECQRDLQFFRWVAVGPNLFGVRALPNSSP
Sbjct: 1  MATVLHLHSAAILNRNSQSVKFSSSPVAELTECQRDLQFFRWVAVGPNLFGVRALPNSSP 60

Query: 61 INVSAHYPKASISEY 75
          INVSAHYPKASISEY
Sbjct: 61 INVSAHYPKASISEY 75

[Close]
BLAST of CsGy3G037450 vs. NCBI nr
Match: KAA0053670.1 (hypothetical protein E6C27_scaffold135G00420 [Cucumis melo var. makuwa] >TYK00839.1 hypothetical protein E5676_scaffold1545G00420 [Cucumis melo var. makuwa])

HSP 1 Score: 84.7 bits (208), Expect = 1.12e-19
Identity = 47/61 (77.05%), Postives = 49/61 (80.33%), Query Frame = 0 

Query: 1  MATVLHLHSAAI------LNRNSQSVKFSSSPVAELTECQRDLQFFRWVAVGPNLFGVRA 55
          MATVLHLHSAAI      L RNS SVKFSSSPVA+L ECQRDL+ FR VAVGPNLF VRA
Sbjct: 1  MATVLHLHSAAIRPENAILRRNSLSVKFSSSPVADLPECQRDLESFRSVAVGPNLFDVRA 60

[Close]
BLAST of CsGy3G037450 vs. ExPASy TrEMBL
Match: A0A0A0LFH6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G837020 PE=4 SV=1)

HSP 1 Score: 152 bits (384), Expect = 1.00e-46
Identity = 75/75 (100.00%), Postives = 75/75 (100.00%), Query Frame = 0 

Query: 1  MATVLHLHSAAILNRNSQSVKFSSSPVAELTECQRDLQFFRWVAVGPNLFGVRALPNSSP 60
          MATVLHLHSAAILNRNSQSVKFSSSPVAELTECQRDLQFFRWVAVGPNLFGVRALPNSSP
Sbjct: 1  MATVLHLHSAAILNRNSQSVKFSSSPVAELTECQRDLQFFRWVAVGPNLFGVRALPNSSP 60

Query: 61 INVSAHYPKASISEY 75
          INVSAHYPKASISEY
Sbjct: 61 INVSAHYPKASISEY 75

[Close]
BLAST of CsGy3G037450 vs. ExPASy TrEMBL
Match: A0A5A7UEN9 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1545G00420 PE=4 SV=1)

HSP 1 Score: 84.7 bits (208), Expect = 5.42e-20
Identity = 47/61 (77.05%), Postives = 49/61 (80.33%), Query Frame = 0 

Query: 1  MATVLHLHSAAI------LNRNSQSVKFSSSPVAELTECQRDLQFFRWVAVGPNLFGVRA 55
          MATVLHLHSAAI      L RNS SVKFSSSPVA+L ECQRDL+ FR VAVGPNLF VRA
Sbjct: 1  MATVLHLHSAAIRPENAILRRNSLSVKFSSSPVADLPECQRDLESFRSVAVGPNLFDVRA 60

The following BLAST results are available for this feature:
BLAST of CsGy3G037450 vs.
Match NameE-valueIdentityDescription
BLAST of CsGy3G037450 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN59669.12.07e-46100.00hypothetical protein Csa_002539 [Cucumis sativus][more]
KAA0053670.11.12e-1977.05hypothetical protein E6C27_scaffold135G00420 [Cucumis melo var. makuwa] >TYK0083... [more]
BLAST of CsGy3G037450 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LFH61.00e-46100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G837020 PE=4 SV=1[more]
A0A5A7UEN95.42e-2077.05Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
BLAST of CsGy3G037450 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsGy3G037450.2CsGy3G037450.2mRNA