CsGy3G035945 (gene) Cucumber (Gy14) v2.1

Overview


Name	CsGy3G035945
Type	gene
Organism	Cucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
Description	Unknown protein
Location	Gy14Chr3: 34287174 .. 34287880 (-)
RNA-Seq Expression	CsGy3G035945
Synteny	CsGy3G035945

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAACTTCACCGGACCTCTTCACTTCCAGGTCTCTCTCTCCAACAACTCATTCTCGCCTCCATTCTTCTGTTTTCCATTGCCTTTCTTCTTTCAGAATCATGCGTTTGATTTCCTATTTTGTTGTTGTTTTTTTTTTTTTTTTCTAATTTTGATTTTCTGGATCTAAACCTACTTGTATATGCTTTCTTAAAGGATTTGATGATGTGGGAAGGAACTGGTTTGTGCATTGTCATATGCGAAATTTTTTGTTGAATTTTCAATATGAAATTGAAGAGATTTCAAGAAGGATGTAGAAAAATCATCCCAAATTCGGTTTTACCTGTTGATATTTTTGCTTTTATTTGTTTACCCCAGATAAGAGAGATGATTCTTCTGTGATGGTTGAGAAAGACGTTGCGGAATCAGTTTCAAGCTTACCGAAAGATGTGCAAACTAACAGAGGTGGGGAGAATGTTGTGAAGGCTGAACCTACGCAACGGGTTGATATGGCTGGGGAAATTAATATGGAGGCTTCCATGTCGGCTGATGATGTTCTACGGGCTGGAGGGTTTGGTGCGAGGGATGAAATTGGTAGTTTTCTTCCTGTTGCAAGTGATTCTACTGACTTTGAGGCTACAATTCTCAATGCTCGAGACTATGAAGGGCCGCAGGGGGAAATTTCTAGACCAGGTCTTGGGTGGAAAGAAGCTACAAAAACTGAGTAG

mRNA sequence

ATGGAACTTCACCGGACCTCTTCACTTCCAGATAAGAGAGATGATTCTTCTGTGATGGTTGAGAAAGACGTTGCGGAATCAGTTTCAAGCTTACCGAAAGATGTGCAAACTAACAGAGGTGGGGAGAATGTTGTGAAGGCTGAACCTACGCAACGGGTTGATATGGCTGGGGAAATTAATATGGAGGCTTCCATGTCGGCTGATGATGTTCTACGGGCTGGAGGGTTTGGTGCGAGGGATGAAATTGGTAGTTTTCTTCCTGTTGCAAGTGATTCTACTGACTTTGAGGCTACAATTCTCAATGCTCGAGACTATGAAGGGCCGCAGGGGGAAATTTCTAGACCAGGTCTTGGGTGGAAAGAAGCTACAAAAACTGAGTAG

Coding sequence (CDS)

ATGGAACTTCACCGGACCTCTTCACTTCCAGATAAGAGAGATGATTCTTCTGTGATGGTTGAGAAAGACGTTGCGGAATCAGTTTCAAGCTTACCGAAAGATGTGCAAACTAACAGAGGTGGGGAGAATGTTGTGAAGGCTGAACCTACGCAACGGGTTGATATGGCTGGGGAAATTAATATGGAGGCTTCCATGTCGGCTGATGATGTTCTACGGGCTGGAGGGTTTGGTGCGAGGGATGAAATTGGTAGTTTTCTTCCTGTTGCAAGTGATTCTACTGACTTTGAGGCTACAATTCTCAATGCTCGAGACTATGAAGGGCCGCAGGGGGAAATTTCTAGACCAGGTCTTGGGTGGAAAGAAGCTACAAAAACTGAGTAG

Protein sequence

MELHRTSSLPDKRDDSSVMVEKDVAESVSSLPKDVQTNRGGENVVKAEPTQRVDMAGEINMEASMSADDVLRAGGFGARDEIGSFLPVASDSTDFEATILNARDYEGPQGEISRPGLGWKEATKTE*

Homology

[Close]

BLAST of CsGy3G035945 vs. NCBI nr
Match: XP_004136669.1 (uncharacterized protein LOC101207074 isoform X1 [Cucumis sativus] >KAE8651196.1 hypothetical protein Csa_002642 [Cucumis sativus])

HSP 1 Score: 249 bits (635), Expect = 4.31e-83
Identity = 126/126 (100.00%), Postives = 126/126 (100.00%), Query Frame = 0


Query: 1   MELHRTSSLPDKRDDSSVMVEKDVAESVSSLPKDVQTNRGGENVVKAEPTQRVDMAGEIN 60
           MELHRTSSLPDKRDDSSVMVEKDVAESVSSLPKDVQTNRGGENVVKAEPTQRVDMAGEIN
Sbjct: 1   MELHRTSSLPDKRDDSSVMVEKDVAESVSSLPKDVQTNRGGENVVKAEPTQRVDMAGEIN 60

Query: 61  MEASMSADDVLRAGGFGARDEIGSFLPVASDSTDFEATILNARDYEGPQGEISRPGLGWK 120
           MEASMSADDVLRAGGFGARDEIGSFLPVASDSTDFEATILNARDYEGPQGEISRPGLGWK
Sbjct: 61  MEASMSADDVLRAGGFGARDEIGSFLPVASDSTDFEATILNARDYEGPQGEISRPGLGWK 120

Query: 121 EATKTE 126
           EATKTE
Sbjct: 121 EATKTE 126

[Close]

BLAST of CsGy3G035945 vs. NCBI nr
Match: XP_008443333.1 (PREDICTED: uncharacterized protein LOC103486945 isoform X1 [Cucumis melo])

HSP 1 Score: 235 bits (600), Expect = 3.56e-77
Identity = 118/126 (93.65%), Postives = 123/126 (97.62%), Query Frame = 0


Query: 1   MELHRTSSLPDKRDDSSVMVEKDVAESVSSLPKDVQTNRGGENVVKAEPTQRVDMAGEIN 60
           MELH TSSLPD+RDDSSVMVEKDV ESVSSLPKD+QTNRG ENVVKAEPT+++DMAGEIN
Sbjct: 41  MELHPTSSLPDERDDSSVMVEKDVTESVSSLPKDLQTNRGRENVVKAEPTRQIDMAGEIN 100

Query: 61  MEASMSADDVLRAGGFGARDEIGSFLPVASDSTDFEATILNARDYEGPQGEISRPGLGWK 120
           MEASMSADDVLRAGGFGARDEIGSFLPVASDSTDFEATILNARDYEGPQGEISRPGLGWK
Sbjct: 101 MEASMSADDVLRAGGFGARDEIGSFLPVASDSTDFEATILNARDYEGPQGEISRPGLGWK 160

Query: 121 EATKTE 126
           EATKTE
Sbjct: 161 EATKTE 166

[Close]

BLAST of CsGy3G035945 vs. NCBI nr
Match: XP_031738872.1 (uncharacterized protein LOC101207074 isoform X2 [Cucumis sativus])

HSP 1 Score: 229 bits (584), Expect = 2.27e-75
Identity = 116/116 (100.00%), Postives = 116/116 (100.00%), Query Frame = 0


Query: 11  DKRDDSSVMVEKDVAESVSSLPKDVQTNRGGENVVKAEPTQRVDMAGEINMEASMSADDV 70
           DKRDDSSVMVEKDVAESVSSLPKDVQTNRGGENVVKAEPTQRVDMAGEINMEASMSADDV
Sbjct: 7   DKRDDSSVMVEKDVAESVSSLPKDVQTNRGGENVVKAEPTQRVDMAGEINMEASMSADDV 66

Query: 71  LRAGGFGARDEIGSFLPVASDSTDFEATILNARDYEGPQGEISRPGLGWKEATKTE 126
           LRAGGFGARDEIGSFLPVASDSTDFEATILNARDYEGPQGEISRPGLGWKEATKTE
Sbjct: 67  LRAGGFGARDEIGSFLPVASDSTDFEATILNARDYEGPQGEISRPGLGWKEATKTE 122

[Close]

BLAST of CsGy3G035945 vs. NCBI nr
Match: XP_038905784.1 (uncharacterized protein LOC120091740 [Benincasa hispida] >XP_038905785.1 uncharacterized protein LOC120091740 [Benincasa hispida])

HSP 1 Score: 221 bits (562), Expect = 5.86e-72
Identity = 110/126 (87.30%), Postives = 119/126 (94.44%), Query Frame = 0


Query: 1   MELHRTSSLPDKRDDSSVMVEKDVAESVSSLPKDVQTNRGGENVVKAEPTQRVDMAGEIN 60
           ME+HR+SSLPDKR+D SV VEKDV ESVSS PKDVQTNRG  N++K EP+Q+VDMAGEI+
Sbjct: 1   MEVHRSSSLPDKREDPSVGVEKDVTESVSSSPKDVQTNRGRGNIMKGEPSQQVDMAGEIS 60

Query: 61  MEASMSADDVLRAGGFGARDEIGSFLPVASDSTDFEATILNARDYEGPQGEISRPGLGWK 120
           MEASMSADDVLRAGGFGARD+IGSFLPVASDSTDFEATILNARDYEGPQGEISRPGLGWK
Sbjct: 61  MEASMSADDVLRAGGFGARDDIGSFLPVASDSTDFEATILNARDYEGPQGEISRPGLGWK 120

Query: 121 EATKTE 126
           EATKTE
Sbjct: 121 EATKTE 126

[Close]

BLAST of CsGy3G035945 vs. NCBI nr
Match: KAA0053822.1 (uncharacterized protein E6C27_scaffold135G002100 [Cucumis melo var. makuwa] >TYK25579.1 uncharacterized protein E5676_scaffold352G007360 [Cucumis melo var. makuwa])

HSP 1 Score: 222 bits (565), Expect = 1.81e-71
Identity = 110/118 (93.22%), Postives = 116/118 (98.31%), Query Frame = 0


Query: 9   LPDKRDDSSVMVEKDVAESVSSLPKDVQTNRGGENVVKAEPTQRVDMAGEINMEASMSAD 68
           +PD+RDDSSVMVEKDV ESVSSLPKD+QTNRG ENVVKAEPT+++DMAGEINMEASMSAD
Sbjct: 75  IPDERDDSSVMVEKDVTESVSSLPKDLQTNRGRENVVKAEPTRQIDMAGEINMEASMSAD 134

Query: 69  DVLRAGGFGARDEIGSFLPVASDSTDFEATILNARDYEGPQGEISRPGLGWKEATKTE 126
           DVLRAGGFGARDEIGSFLPVASDSTDFEATILNARDYEGPQGEISRPGLGWKEATKTE
Sbjct: 135 DVLRAGGFGARDEIGSFLPVASDSTDFEATILNARDYEGPQGEISRPGLGWKEATKTE 192

[Close]

BLAST of CsGy3G035945 vs. ExPASy TrEMBL
Match: A0A1S3B7A8 (uncharacterized protein LOC103486945 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103486945 PE=4 SV=1)

HSP 1 Score: 235 bits (600), Expect = 1.73e-77
Identity = 118/126 (93.65%), Postives = 123/126 (97.62%), Query Frame = 0


Query: 1   MELHRTSSLPDKRDDSSVMVEKDVAESVSSLPKDVQTNRGGENVVKAEPTQRVDMAGEIN 60
           MELH TSSLPD+RDDSSVMVEKDV ESVSSLPKD+QTNRG ENVVKAEPT+++DMAGEIN
Sbjct: 41  MELHPTSSLPDERDDSSVMVEKDVTESVSSLPKDLQTNRGRENVVKAEPTRQIDMAGEIN 100

Query: 61  MEASMSADDVLRAGGFGARDEIGSFLPVASDSTDFEATILNARDYEGPQGEISRPGLGWK 120
           MEASMSADDVLRAGGFGARDEIGSFLPVASDSTDFEATILNARDYEGPQGEISRPGLGWK
Sbjct: 101 MEASMSADDVLRAGGFGARDEIGSFLPVASDSTDFEATILNARDYEGPQGEISRPGLGWK 160

Query: 121 EATKTE 126
           EATKTE
Sbjct: 161 EATKTE 166

[Close]

BLAST of CsGy3G035945 vs. ExPASy TrEMBL
Match: A0A0A0LBZ5 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G823040 PE=4 SV=1)

HSP 1 Score: 229 bits (584), Expect = 1.10e-75
Identity = 116/116 (100.00%), Postives = 116/116 (100.00%), Query Frame = 0


Query: 11  DKRDDSSVMVEKDVAESVSSLPKDVQTNRGGENVVKAEPTQRVDMAGEINMEASMSADDV 70
           DKRDDSSVMVEKDVAESVSSLPKDVQTNRGGENVVKAEPTQRVDMAGEINMEASMSADDV
Sbjct: 7   DKRDDSSVMVEKDVAESVSSLPKDVQTNRGGENVVKAEPTQRVDMAGEINMEASMSADDV 66

Query: 71  LRAGGFGARDEIGSFLPVASDSTDFEATILNARDYEGPQGEISRPGLGWKEATKTE 126
           LRAGGFGARDEIGSFLPVASDSTDFEATILNARDYEGPQGEISRPGLGWKEATKTE
Sbjct: 67  LRAGGFGARDEIGSFLPVASDSTDFEATILNARDYEGPQGEISRPGLGWKEATKTE 122

[Close]

BLAST of CsGy3G035945 vs. ExPASy TrEMBL
Match: A0A5A7UDF7 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G007360 PE=4 SV=1)

HSP 1 Score: 222 bits (565), Expect = 8.75e-72
Identity = 110/118 (93.22%), Postives = 116/118 (98.31%), Query Frame = 0


Query: 9   LPDKRDDSSVMVEKDVAESVSSLPKDVQTNRGGENVVKAEPTQRVDMAGEINMEASMSAD 68
           +PD+RDDSSVMVEKDV ESVSSLPKD+QTNRG ENVVKAEPT+++DMAGEINMEASMSAD
Sbjct: 75  IPDERDDSSVMVEKDVTESVSSLPKDLQTNRGRENVVKAEPTRQIDMAGEINMEASMSAD 134

Query: 69  DVLRAGGFGARDEIGSFLPVASDSTDFEATILNARDYEGPQGEISRPGLGWKEATKTE 126
           DVLRAGGFGARDEIGSFLPVASDSTDFEATILNARDYEGPQGEISRPGLGWKEATKTE
Sbjct: 135 DVLRAGGFGARDEIGSFLPVASDSTDFEATILNARDYEGPQGEISRPGLGWKEATKTE 192

[Close]

BLAST of CsGy3G035945 vs. ExPASy TrEMBL
Match: A0A1S4DUS7 (uncharacterized protein LOC103486945 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103486945 PE=4 SV=1)

HSP 1 Score: 218 bits (556), Expect = 2.04e-71
Identity = 109/116 (93.97%), Postives = 114/116 (98.28%), Query Frame = 0


Query: 11  DKRDDSSVMVEKDVAESVSSLPKDVQTNRGGENVVKAEPTQRVDMAGEINMEASMSADDV 70
           D+RDDSSVMVEKDV ESVSSLPKD+QTNRG ENVVKAEPT+++DMAGEINMEASMSADDV
Sbjct: 7   DERDDSSVMVEKDVTESVSSLPKDLQTNRGRENVVKAEPTRQIDMAGEINMEASMSADDV 66

Query: 71  LRAGGFGARDEIGSFLPVASDSTDFEATILNARDYEGPQGEISRPGLGWKEATKTE 126
           LRAGGFGARDEIGSFLPVASDSTDFEATILNARDYEGPQGEISRPGLGWKEATKTE
Sbjct: 67  LRAGGFGARDEIGSFLPVASDSTDFEATILNARDYEGPQGEISRPGLGWKEATKTE 122

[Close]

BLAST of CsGy3G035945 vs. ExPASy TrEMBL
Match: A0A1S3B7U2 (uncharacterized protein LOC103486945 isoform X3 OS=Cucumis melo OX=3656 GN=LOC103486945 PE=4 SV=1)

HSP 1 Score: 216 bits (551), Expect = 1.01e-70
Identity = 108/115 (93.91%), Postives = 113/115 (98.26%), Query Frame = 0


Query: 12  KRDDSSVMVEKDVAESVSSLPKDVQTNRGGENVVKAEPTQRVDMAGEINMEASMSADDVL 71
           +RDDSSVMVEKDV ESVSSLPKD+QTNRG ENVVKAEPT+++DMAGEINMEASMSADDVL
Sbjct: 3   ERDDSSVMVEKDVTESVSSLPKDLQTNRGRENVVKAEPTRQIDMAGEINMEASMSADDVL 62

Query: 72  RAGGFGARDEIGSFLPVASDSTDFEATILNARDYEGPQGEISRPGLGWKEATKTE 126
           RAGGFGARDEIGSFLPVASDSTDFEATILNARDYEGPQGEISRPGLGWKEATKTE
Sbjct: 63  RAGGFGARDEIGSFLPVASDSTDFEATILNARDYEGPQGEISRPGLGWKEATKTE 117

[Close]

BLAST of CsGy3G035945 vs. TAIR 10
Match: AT5G04000.1 (unknown protein; Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). )

HSP 1 Score: 101.3 bits (251), Expect = 5.9e-22
Identity = 47/63 (74.60%), Postives = 57/63 (90.48%), Query Frame = 0


Query: 57  GEINMEASMSADDVLRAGGFGARDEIGSFLPVASDSTDFEATILNARDYEGPQGEISRPG 116
           GE+NMEAS+SA+DV+RAGGFGA+D+IGSFLPVASDSTDFE +I +ARDYE  Q E+ RPG
Sbjct: 51  GEVNMEASISAEDVIRAGGFGAKDDIGSFLPVASDSTDFEESIRSARDYEEAQPEVQRPG 110

Query: 117 LGW 120
           LG+
Sbjct: 111 LGY 113

[Close]

BLAST of CsGy3G035945 vs. TAIR 10
Match: AT5G04000.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: inflorescence meristem, hypocotyl. )

HSP 1 Score: 101.3 bits (251), Expect = 5.9e-22
Identity = 47/63 (74.60%), Postives = 57/63 (90.48%), Query Frame = 0


Query: 57  GEINMEASMSADDVLRAGGFGARDEIGSFLPVASDSTDFEATILNARDYEGPQGEISRPG 116
           GE+NMEAS+SA+DV+RAGGFGA+D+IGSFLPVASDSTDFE +I +ARDYE  Q E+ RPG
Sbjct: 53  GEVNMEASISAEDVIRAGGFGAKDDIGSFLPVASDSTDFEESIRSARDYEEAQPEVQRPG 112

Query: 117 LGW 120
           LG+
Sbjct: 113 LGY 115

The following BLAST results are available for this feature:

BLAST of CsGy3G035945 vs.


Match Name	E-value	Identity	Description

BLAST of CsGy3G035945 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004136669.1	4.31e-83	100.00	uncharacterized protein LOC101207074 isoform X1 [Cucumis sativus] >KAE8651196.1 ...	[more]
XP_008443333.1	3.56e-77	93.65	PREDICTED: uncharacterized protein LOC103486945 isoform X1 [Cucumis melo]	[more]
XP_031738872.1	2.27e-75	100.00	uncharacterized protein LOC101207074 isoform X2 [Cucumis sativus]	[more]
XP_038905784.1	5.86e-72	87.30	uncharacterized protein LOC120091740 [Benincasa hispida] >XP_038905785.1 unchara...	[more]
KAA0053822.1	1.81e-71	93.22	uncharacterized protein E6C27_scaffold135G002100 [Cucumis melo var. makuwa] >TYK...	[more]

BLAST of CsGy3G035945 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3B7A8	1.73e-77	93.65	uncharacterized protein LOC103486945 isoform X1 OS=Cucumis melo OX=3656 GN=LOC10...	[more]
A0A0A0LBZ5	1.10e-75	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G823040 PE=4 SV=1	[more]
A0A5A7UDF7	8.75e-72	93.22	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A1S4DUS7	2.04e-71	93.97	uncharacterized protein LOC103486945 isoform X2 OS=Cucumis melo OX=3656 GN=LOC10...	[more]
A0A1S3B7U2	1.01e-70	93.91	uncharacterized protein LOC103486945 isoform X3 OS=Cucumis melo OX=3656 GN=LOC10...	[more]

BLAST of CsGy3G035945 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G04000.1	5.9e-22	74.60	unknown protein; Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0...	[more]
AT5G04000.2	5.9e-22	74.60	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (Gy14) v2.1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 106..126
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..42
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..21
None	No IPR available	PANTHER	PTHR37250	OS05G0496000 PROTEIN	coord: 17..125

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsGy3G035945.1	CsGy3G035945.1	mRNA