Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGACCAAACGAAGCCCAATTCCAATAATGAATTTAAATTTCTTTCGCCAATCAATGGGAATGAGTATTTCATTTCAAAGGCTGGCTGTGAGGGGATGAAGCAGATGAAGGGAGTATCGAACTCAGGAGGATTTTGATGGAAACCATGTCGGGTCGGATTTGAATGGAGTTTACTCTCTTTTGCAGAAGCCATGCTCGGAATTCGGACTTAATCTTTCGCTCTCGGCTACCGCGGATGTTCACGTTGGCAAAGATGTTCCGGTGTTCATTTCTTTATCGTCCAGATTAGAAGACCAGTTGAAAAACGGAGTGATTTTTCATCCCCTGAATCTCTCTTTTCTTCTCGAAGAGGGTTATGTTGGCCTCTCCGCTTCGAAATTCGATTTAAATACACAGCTGAATTGGATAAAATCATGGCAATTCAACGGGAGAGACGTCGACAACAACGACGACAATGAATCCGATAACCATCGTCGACAGGTGTATGATACGGCTGGCGTAATCGGTGGACTCTCTGTTATTTGGGGTTGAACTCTTCCGCTTTTGGGTCGTGGAAGAAACGTAAAAAGGATTCGGAAGAAGCATCTGACGATGTTATAGAATATGAGCTTCAAGATTTCTCCATAGCCCCACGAGTTCCAAAATGGGATTCAAAGAACTAAAGAAAGCAACGGATAGTTTCAACCCGAAGAACAGTTTGGGGAAAGGCAAATTTGGAACTGTTTTTCACAGAGGAAATTTGAAAAACATGAAGGCCACCGCGAAGAGAATCTGA
mRNA sequence
ATGGACCAAACGAAGCCCAATTCCAATAATGAATTTAAATTTCTTTCGCCAATCAATGGGAATGAGTATTTCATTTCAAAGGCTGGCTGTGAGGGGATGAAGCAGATGAAGGGAAAGCCATGCTCGGAATTCGGACTTAATCTTTCGCTCTCGGCTACCGCGGATGTTCACGTTGGCAAAGATGTTCCGGTGTTCATTTCTTTATCGTCCAGATTAGAAGACCAGTTGAAAAACGGAGTGATTTTTCATCCCCTGAATCTCTCTTTTCTTCTCGAAGAGGGTTATGTTGGCCTCTCCGCTTCGAAATTCGATTTAAATACACAGCTGAATTGGATAAAATCATGGCAATTCAACGGGAGAGACGTCGACAACAACGACGACAATGAATCCGATAACCATCGTCGACAGAAACGTAAAAAGGATTCGGAAGAAGCATCTGACGATGTTATAGAATATGAGCTTCAAGATTTCTCCATAGCCCCACGAAAAGCAACGGATAGTTTCAACCCGAAGAACAGTTTGGGGAAAGGCAAATTTGGAACTGTTTTTCACAGAGGAAATTTGAAAAACATGAAGGCCACCGCGAAGAGAATCTGA
Coding sequence (CDS)
ATGGACCAAACGAAGCCCAATTCCAATAATGAATTTAAATTTCTTTCGCCAATCAATGGGAATGAGTATTTCATTTCAAAGGCTGGCTGTGAGGGGATGAAGCAGATGAAGGGAAAGCCATGCTCGGAATTCGGACTTAATCTTTCGCTCTCGGCTACCGCGGATGTTCACGTTGGCAAAGATGTTCCGGTGTTCATTTCTTTATCGTCCAGATTAGAAGACCAGTTGAAAAACGGAGTGATTTTTCATCCCCTGAATCTCTCTTTTCTTCTCGAAGAGGGTTATGTTGGCCTCTCCGCTTCGAAATTCGATTTAAATACACAGCTGAATTGGATAAAATCATGGCAATTCAACGGGAGAGACGTCGACAACAACGACGACAATGAATCCGATAACCATCGTCGACAGAAACGTAAAAAGGATTCGGAAGAAGCATCTGACGATGTTATAGAATATGAGCTTCAAGATTTCTCCATAGCCCCACGAAAAGCAACGGATAGTTTCAACCCGAAGAACAGTTTGGGGAAAGGCAAATTTGGAACTGTTTTTCACAGAGGAAATTTGAAAAACATGAAGGCCACCGCGAAGAGAATCTGA
Protein sequence
MDQTKPNSNNEFKFLSPINGNEYFISKAGCEGMKQMKGKPCSEFGLNLSLSATADVHVGKDVPVFISLSSRLEDQLKNGVIFHPLNLSFLLEEGYVGLSASKFDLNTQLNWIKSWQFNGRDVDNNDDNESDNHRRQKRKKDSEEASDDVIEYELQDFSIAPRKATDSFNPKNSLGKGKFGTVFHRGNLKNMKATAKRI*
Homology
BLAST of CsGy3G033790 vs. NCBI nr
Match:
KGN59429.2 (hypothetical protein Csa_001169 [Cucumis sativus])
HSP 1 Score: 197 bits (501), Expect = 2.68e-61
Identity = 98/102 (96.08%), Postives = 99/102 (97.06%), Query Frame = 0
Query: 35 QMKGKPCSEFGLNLSLSATADVHVGKDVPVFISLSSRLEDQLKNGVIFHPLNLSFLLEEG 94
Q KPCSEFGLNLSLSATADV+VGKDVPVFISLSSRLEDQLKNGVIFHPLNLSFLLEEG
Sbjct: 8 QRLAKPCSEFGLNLSLSATADVYVGKDVPVFISLSSRLEDQLKNGVIFHPLNLSFLLEEG 67
Query: 95 YVGLSASKFDLNTQLNWIKSWQFNGRDVDNNDDNESDNHRRQ 136
YVGLSASKFDLNTQLNWIKSWQFNGRDVDNNDDNESDNHRRQ
Sbjct: 68 YVGLSASKFDLNTQLNWIKSWQFNGRDVDNNDDNESDNHRRQ 109
BLAST of CsGy3G033790 vs. NCBI nr
Match:
XP_038903656.1 (probable L-type lectin-domain containing receptor kinase S.5 [Benincasa hispida])
HSP 1 Score: 187 bits (476), Expect = 4.53e-52
Identity = 118/224 (52.68%), Postives = 140/224 (62.50%), Query Frame = 0
Query: 14 FLSPINGNEYFISKAGCEGMKQMKGKPCSEFGLNLSLSATADVHV---GKDVPVFISLSS 73
F ++GN + G + Q KP SEFG+NLS A V G++V VF+SLSS
Sbjct: 158 FPEDVDGNHVGLDLNGVYSVLQ---KPLSEFGVNLSAMADVFARVDFDGENVSVFVSLSS 217
Query: 74 RLEDQLKNGVIFHPLNLSFLLEEGYVGLSASKFDLNTQLNWIKSWQFNGRDVDNNDDNES 133
RLEDQLKN VIFHPLNLSFL +E YVG SASKFD N+Q+NWIKSWQF G DVD+ D+ ES
Sbjct: 218 RLEDQLKNRVIFHPLNLSFLPDEVYVGFSASKFDFNSQINWIKSWQFLGTDVDD-DEEES 277
Query: 134 DNHRRQ--------------------------KRKKDSEEASDDVIEYELQDFSIAPR-- 193
DNHRR+ KRK+D EEA D+ IE +LQDFSIA R
Sbjct: 278 DNHRRRVYITVGVISGLVLLFGVGFLWFWIMKKRKRDLEEADDNGIEDQLQDFSIAQRVQ 337
Query: 194 --------KATDSFNPKNSLGKGKFGTVFHRGNLKNMKATAKRI 198
KATD+F+PKNSLGKG FGTV+ +GNLKN + KRI
Sbjct: 338 KFGLKELKKATDNFDPKNSLGKGGFGTVY-KGNLKNREVAVKRI 376
BLAST of CsGy3G033790 vs. NCBI nr
Match:
XP_022935657.1 (probable L-type lectin-domain containing receptor kinase S.5 [Cucurbita moschata])
HSP 1 Score: 167 bits (422), Expect = 2.56e-44
Identity = 111/227 (48.90%), Postives = 139/227 (61.23%), Query Frame = 0
Query: 14 FLSPINGNEYFISKAGCEGMKQMKGKPCSEFGLNLSLSATADVHV-----GKDVPVFISL 73
F ++GN + G + + Q+ P S G+NLS TADV V G+++ VF+SL
Sbjct: 161 FPGDVDGNHVGLDLNGVDSVLQV---PLSGIGVNLS--GTADVFVRVDFDGENISVFVSL 220
Query: 74 SSRLEDQLKNGVIFHPLNLSFLLEEGYVGLSASKFDLNTQLNWIKSWQFNGRDVDNNDDN 133
SSRLEDQLK+ VIFHPLNLSFL +E YVG SASKFD ++QLNWIKSWQF+G DV D
Sbjct: 221 SSRLEDQLKSRVIFHPLNLSFLPDEVYVGFSASKFDYSSQLNWIKSWQFSGDDVG---DV 280
Query: 134 ESDNHRR---------------------------QKRKKDSEEASDDVIEYELQDFSIAP 193
ES+NHRR +KR++D EEA+D IE +LQDFSIAP
Sbjct: 281 ESNNHRRWVNIAIGVGVSGVVLLLGVGFLWFWIMKKRRRDLEEANDG-IEDQLQDFSIAP 340
Query: 194 R----------KATDSFNPKNSLGKGKFGTVFHRGNLKNMKATAKRI 198
R KATD+F+PKN LG+G FGTV+ +GNL N + KRI
Sbjct: 341 RVQKFRFRELKKATDNFDPKNRLGRGGFGTVY-KGNLTNREVAVKRI 377
BLAST of CsGy3G033790 vs. NCBI nr
Match:
KAG6580798.1 (putative L-type lectin-domain containing receptor kinase S.5, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 167 bits (422), Expect = 2.58e-44
Identity = 111/227 (48.90%), Postives = 139/227 (61.23%), Query Frame = 0
Query: 14 FLSPINGNEYFISKAGCEGMKQMKGKPCSEFGLNLSLSATADVHV-----GKDVPVFISL 73
F ++GN + G + + Q+ P S G+NLS TADV V G+++ VF+SL
Sbjct: 161 FPGDVDGNHVGLDLNGVDSVLQV---PLSGIGVNLS--GTADVFVRVDFDGENISVFVSL 220
Query: 74 SSRLEDQLKNGVIFHPLNLSFLLEEGYVGLSASKFDLNTQLNWIKSWQFNGRDVDNNDDN 133
SSRLEDQLK+ VIFHPLNLSFL +E YVG SASKFD ++QLNWIKSWQF+G DV D
Sbjct: 221 SSRLEDQLKSRVIFHPLNLSFLPDEVYVGFSASKFDYSSQLNWIKSWQFSGDDVG---DV 280
Query: 134 ESDNHRR---------------------------QKRKKDSEEASDDVIEYELQDFSIAP 193
ES+NHRR +KR++D EEA+D IE +LQDFSIAP
Sbjct: 281 ESNNHRRWVNIAIGVGVSGVVLLLGVGFLWFWIMKKRRRDLEEANDG-IEDQLQDFSIAP 340
Query: 194 R----------KATDSFNPKNSLGKGKFGTVFHRGNLKNMKATAKRI 198
R KATD+F+PKN LG+G FGTV+ +GNL N + KRI
Sbjct: 341 RVQKFRFRELKKATDNFDPKNRLGRGGFGTVY-KGNLTNREVAVKRI 377
BLAST of CsGy3G033790 vs. NCBI nr
Match:
XP_023527734.1 (probable L-type lectin-domain containing receptor kinase S.5 [Cucurbita pepo subsp. pepo])
HSP 1 Score: 166 bits (420), Expect = 4.90e-44
Identity = 111/227 (48.90%), Postives = 138/227 (60.79%), Query Frame = 0
Query: 14 FLSPINGNEYFISKAGCEGMKQMKGKPCSEFGLNLSLSATADVHV-----GKDVPVFISL 73
F ++GN + G E + Q+ P S G+NLS TADV V G+++ VF+S
Sbjct: 161 FPGDVDGNHVGLDLNGVESVLQV---PLSGIGVNLS--GTADVFVRVDFDGENISVFVSY 220
Query: 74 SSRLEDQLKNGVIFHPLNLSFLLEEGYVGLSASKFDLNTQLNWIKSWQFNGRDVDNNDDN 133
SSRLEDQLK+ VIFHPLNLSFL +E YVG SASKFD ++QLNWIKSWQF+G DV D
Sbjct: 221 SSRLEDQLKSRVIFHPLNLSFLPDEVYVGFSASKFDYSSQLNWIKSWQFSGDDVG---DV 280
Query: 134 ESDNHRR---------------------------QKRKKDSEEASDDVIEYELQDFSIAP 193
ES+NHRR +KR++D EEA+D IE +LQDFSIAP
Sbjct: 281 ESNNHRRWVSIGVGVGVSGVVLLLGVGFLWFWIMKKRRRDLEEANDG-IEDQLQDFSIAP 340
Query: 194 R----------KATDSFNPKNSLGKGKFGTVFHRGNLKNMKATAKRI 198
R KATD+F+PKN LG+G FGTV+ +GNL N + KRI
Sbjct: 341 RVQKFRFRELKKATDNFDPKNRLGRGGFGTVY-KGNLTNREVAVKRI 377
BLAST of CsGy3G033790 vs. ExPASy TrEMBL
Match:
A0A0A0LF07 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G800700 PE=4 SV=1)
HSP 1 Score: 307 bits (787), Expect = 1.68e-104
Identity = 159/174 (91.38%), Postives = 160/174 (91.95%), Query Frame = 0
Query: 35 QMKGKPCSEFGLNLSLSATADVHVGKDVPVFISLSSRLEDQLKNGVIFHPLNLSFLLEEG 94
Q KPCSEFGLNLSLSATADV+VGKDVPVFISLSSRLEDQLKNGVIFHPLNLSFLLEEG
Sbjct: 8 QRLAKPCSEFGLNLSLSATADVYVGKDVPVFISLSSRLEDQLKNGVIFHPLNLSFLLEEG 67
Query: 95 YVGLSASKFDLNTQLNWIKSWQFNGRDVDNNDDNESDNHRRQKRKKDSEEASDDVIEYEL 154
YVGLSASKFDLNTQLNWIKSWQFNGRDVDNNDDNESDNHRRQKRKKDSEEASDDVIEYEL
Sbjct: 68 YVGLSASKFDLNTQLNWIKSWQFNGRDVDNNDDNESDNHRRQKRKKDSEEASDDVIEYEL 127
Query: 155 QDFSIAPR----------KATDSFNPKNSLGKGKFGTVFHRGNLKNMKATAKRI 198
QDFSIAPR K TDSFNPKNSLGKGKFGTVFHRGNLKNMKATAKRI
Sbjct: 128 QDFSIAPRVPKMGFKELKKVTDSFNPKNSLGKGKFGTVFHRGNLKNMKATAKRI 181
BLAST of CsGy3G033790 vs. ExPASy TrEMBL
Match:
A0A6J1F671 (probable L-type lectin-domain containing receptor kinase S.5 OS=Cucurbita moschata OX=3662 GN=LOC111442448 PE=3 SV=1)
HSP 1 Score: 167 bits (422), Expect = 1.24e-44
Identity = 111/227 (48.90%), Postives = 139/227 (61.23%), Query Frame = 0
Query: 14 FLSPINGNEYFISKAGCEGMKQMKGKPCSEFGLNLSLSATADVHV-----GKDVPVFISL 73
F ++GN + G + + Q+ P S G+NLS TADV V G+++ VF+SL
Sbjct: 161 FPGDVDGNHVGLDLNGVDSVLQV---PLSGIGVNLS--GTADVFVRVDFDGENISVFVSL 220
Query: 74 SSRLEDQLKNGVIFHPLNLSFLLEEGYVGLSASKFDLNTQLNWIKSWQFNGRDVDNNDDN 133
SSRLEDQLK+ VIFHPLNLSFL +E YVG SASKFD ++QLNWIKSWQF+G DV D
Sbjct: 221 SSRLEDQLKSRVIFHPLNLSFLPDEVYVGFSASKFDYSSQLNWIKSWQFSGDDVG---DV 280
Query: 134 ESDNHRR---------------------------QKRKKDSEEASDDVIEYELQDFSIAP 193
ES+NHRR +KR++D EEA+D IE +LQDFSIAP
Sbjct: 281 ESNNHRRWVNIAIGVGVSGVVLLLGVGFLWFWIMKKRRRDLEEANDG-IEDQLQDFSIAP 340
Query: 194 R----------KATDSFNPKNSLGKGKFGTVFHRGNLKNMKATAKRI 198
R KATD+F+PKN LG+G FGTV+ +GNL N + KRI
Sbjct: 341 RVQKFRFRELKKATDNFDPKNRLGRGGFGTVY-KGNLTNREVAVKRI 377
BLAST of CsGy3G033790 vs. ExPASy TrEMBL
Match:
A0A6J1J0L6 (probable L-type lectin-domain containing receptor kinase S.5 OS=Cucurbita maxima OX=3661 GN=LOC111481592 PE=3 SV=1)
HSP 1 Score: 166 bits (419), Expect = 3.25e-44
Identity = 111/227 (48.90%), Postives = 137/227 (60.35%), Query Frame = 0
Query: 14 FLSPINGNEYFISKAGCEGMKQMKGKPCSEFGLNLSLSATADVHV-----GKDVPVFISL 73
F ++GN + G + + Q+ P S G+NLS TADV V G+++ VF+SL
Sbjct: 161 FPGDVDGNHVGLDLNGVDSVLQV---PLSGIGVNLS--GTADVFVRVDFDGENIAVFVSL 220
Query: 74 SSRLEDQLKNGVIFHPLNLSFLLEEGYVGLSASKFDLNTQLNWIKSWQFNGRDVDNNDDN 133
SSRLEDQLK+ VIFHPLNLSFL +E YVG SASKFD +QLNWIKSWQF G DVD D
Sbjct: 221 SSRLEDQLKSRVIFHPLNLSFLPDEVYVGFSASKFDYISQLNWIKSWQFTGDDVD---DE 280
Query: 134 ESDNHRR---------------------------QKRKKDSEEASDDVIEYELQDFSIAP 193
ES+N RR +KR++D EEA+D IE +LQDFSIAP
Sbjct: 281 ESNNRRRWVDIAVGVGVSGVVLLLGVGFLWFWIMKKRRRDLEEANDG-IEDQLQDFSIAP 340
Query: 194 R----------KATDSFNPKNSLGKGKFGTVFHRGNLKNMKATAKRI 198
R KATD+F+PKN LG+G FGTV+ +GNL N + KRI
Sbjct: 341 RAQKFRFRELKKATDNFDPKNRLGRGGFGTVY-KGNLTNREVAVKRI 377
BLAST of CsGy3G033790 vs. ExPASy TrEMBL
Match:
A0A6J1DVK5 (LOW QUALITY PROTEIN: uncharacterized protein LOC111024852 OS=Momordica charantia OX=3673 GN=LOC111024852 PE=3 SV=1)
HSP 1 Score: 146 bits (368), Expect = 8.11e-37
Identity = 101/227 (44.49%), Postives = 130/227 (57.27%), Query Frame = 0
Query: 14 FLSPINGNEYFISKAGCEGMKQMKGKPCSEFGLNLSLSATADVHV-----GKDVPVFISL 73
F ++GN + + Q KP SEF +NLS A DV V G+++ +++S
Sbjct: 156 FPEDVDGNHVGLDLNSVYSVSQ---KPLSEFRVNLS--AMTDVFVRADFDGQNISIYVST 215
Query: 74 SSRLEDQLKNGVIFHPLNLSFLLEEGYVGLSASKFDLNTQLNWIKSWQFNGRDVDNNDDN 133
SSRLEDQLK+ VIFHPLNLS L +E YVG SASKF+ +QLNWIKSWQF+G DV ++DD
Sbjct: 216 SSRLEDQLKSRVIFHPLNLSVLPDEVYVGFSASKFNYESQLNWIKSWQFSGTDVVDDDDK 275
Query: 134 ESDNHRR---------------------------QKRKKDSEEASDDVIEYELQDFSIAP 193
+HRR +++ +DSEEA D IE +LQDFSI+P
Sbjct: 276 ---HHRRGWVWITAVAGGLVFISGVAILCFWVVRKRQMEDSEEAYPD-IEDQLQDFSISP 335
Query: 194 R----------KATDSFNPKNSLGKGKFGTVFHRGNLKNMKATAKRI 198
R AT +F+PKN LG+G FGTV+ RGNL N KRI
Sbjct: 336 RVQKFGFTELKNATGNFDPKNRLGRGGFGTVY-RGNLMNKDVAVKRI 372
BLAST of CsGy3G033790 vs. ExPASy TrEMBL
Match:
A0A6J1DD00 (probable L-type lectin-domain containing receptor kinase S.5 OS=Momordica charantia OX=3673 GN=LOC111019347 PE=3 SV=1)
HSP 1 Score: 137 bits (346), Expect = 4.62e-34
Identity = 96/225 (42.67%), Postives = 125/225 (55.56%), Query Frame = 0
Query: 14 FLSPINGNEYFISKAGCEGMKQMKGKPCSEFGLNLSLSATADVHV-----GKDVPVFISL 73
F ++GN + + QM P SEFG+NLS AT D++V GK++ +++SL
Sbjct: 159 FPEDVDGNHVGLDLNSVYSVFQM---PLSEFGVNLS--ATDDIYVRAEFDGKNISIYVSL 218
Query: 74 SSRLEDQLKNGVIFHPLNLSFLLEEGYVGLSASKFDLNTQLNW-IKSWQFNGRDVDNNDD 133
S+RLED+LKN VIFHPLNLS L +E Y+G SASKF+ N QLNW +KSWQF+G D+
Sbjct: 219 SARLEDRLKNRVIFHPLNLSVLPDEVYLGFSASKFEYNAQLNWGVKSWQFSGTDI----- 278
Query: 134 NESDNHR------------------------RQKRKKDSEEASDDVIEYELQDFSIAPR- 193
D R +KRK + E IE +LQDFSIAPR
Sbjct: 279 --GDKRRWVWVFLGAGGLVLLSGVALLILWIMRKRKLNDLEEGYPGIEDQLQDFSIAPRV 338
Query: 194 ---------KATDSFNPKNSLGKGKFGTVFHRGNLKNMKATAKRI 198
KAT +F+ KN LG+G FGTV+ RG+L N + KRI
Sbjct: 339 QKFEFSELKKATGNFDAKNRLGRGGFGTVY-RGDLMNREVAVKRI 370
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
KGN59429.2 | 2.68e-61 | 96.08 | hypothetical protein Csa_001169 [Cucumis sativus] | [more] |
XP_038903656.1 | 4.53e-52 | 52.68 | probable L-type lectin-domain containing receptor kinase S.5 [Benincasa hispida] | [more] |
XP_022935657.1 | 2.56e-44 | 48.90 | probable L-type lectin-domain containing receptor kinase S.5 [Cucurbita moschata... | [more] |
KAG6580798.1 | 2.58e-44 | 48.90 | putative L-type lectin-domain containing receptor kinase S.5, partial [Cucurbita... | [more] |
XP_023527734.1 | 4.90e-44 | 48.90 | probable L-type lectin-domain containing receptor kinase S.5 [Cucurbita pepo sub... | [more] |
Match Name | E-value | Identity | Description | |
A0A0A0LF07 | 1.68e-104 | 91.38 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G800700 PE=4 SV=1 | [more] |
A0A6J1F671 | 1.24e-44 | 48.90 | probable L-type lectin-domain containing receptor kinase S.5 OS=Cucurbita moscha... | [more] |
A0A6J1J0L6 | 3.25e-44 | 48.90 | probable L-type lectin-domain containing receptor kinase S.5 OS=Cucurbita maxima... | [more] |
A0A6J1DVK5 | 8.11e-37 | 44.49 | LOW QUALITY PROTEIN: uncharacterized protein LOC111024852 OS=Momordica charantia... | [more] |
A0A6J1DD00 | 4.62e-34 | 42.67 | probable L-type lectin-domain containing receptor kinase S.5 OS=Momordica charan... | [more] |
Match Name | E-value | Identity | Description | |