CsGy3G033410 (gene) Cucumber (Gy14) v2.1

Overview


Name	CsGy3G033410
Type	gene
Organism	Cucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
Description	VQ domain-containing protein
Location	Gy14Chr3: 32419634 .. 32420106 (+)
RNA-Seq Expression	CsGy3G033410
Synteny	CsGy3G033410

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AAAAATCTCACCAATTTTCGAAGCCCCACCGGGAAATTGAACAGCAACAATGATGATAACCTCCGCCACCGCAAGGAATCATTCGCAATTGCGAGGGCCAAGGCCACCGCCATTGACGGTTAACAAATCCAGCTCCACTAACATTTCCAAGAAATCAACGAAGAATAATCCTCTTCCGATTTCGAATCAACGCCATCGCCGTTCTCCGATAATCATTTACCTTCGATCCCCAAAGGTCATCCATGTTCGGCCTGAGGAGTTCAAAAGCTTCGTTCAACGTCTCACTGGAAATCGATCCTCTGTAGCCGTCGTCGCCTCATCCTGTTCTGCTACTGGAATGATTAATGATGAGGAATTTGTATCCGTGTGCAATTGCATTCCGTCGTAGCTTCCGCCGTGGATCCGTCGTCGGTTCGGGGGTTATTTGTAGGTGTAGCCGAGAGAGTGTTTCAGTACTATCACTGATTCTCTAG

mRNA sequence

AAAAATCTCACCAATTTTCGAAGCCCCACCGGGAAATTGAACAGCAACAATGATGATAACCTCCGCCACCGCAAGGAATCATTCGCAATTGCGAGGGCCAAGGCCACCGCCATTGACGGTTAACAAATCCAGCTCCACTAACATTTCCAAGAAATCAACGAAGAATAATCCTCTTCCGATTTCGAATCAACGCCATCGCCGTTCTCCGATAATCATTTACCTTCGATCCCCAAAGGTCATCCATGTTCGGCCTGAGGAGTTCAAAAGCTTCGTTCAACGTCTCACTGGAAATCGATCCTCTGTAGCCGTCGTCGCCTCATCCTGTTCTGCTACTGGAATGATTAATGATGAGGAATTTGTATCCGTGTGCAATTGCATTCCGTCGTAGCTTCCGCCGTGGATCCGTCGTCGGTTCGGGGGTTATTTGTAGGTGTAGCCGAGAGAGTGTTTCAGTACTATCACTGATTCTCTAG

Coding sequence (CDS)

ATGATGATAACCTCCGCCACCGCAAGGAATCATTCGCAATTGCGAGGGCCAAGGCCACCGCCATTGACGGTTAACAAATCCAGCTCCACTAACATTTCCAAGAAATCAACGAAGAATAATCCTCTTCCGATTTCGAATCAACGCCATCGCCGTTCTCCGATAATCATTTACCTTCGATCCCCAAAGGTCATCCATGTTCGGCCTGAGGAGTTCAAAAGCTTCGTTCAACGTCTCACTGGAAATCGATCCTCTGTAGCCGTCGTCGCCTCATCCTGTTCTGCTACTGGAATGATTAATGATGAGGAATTTGTATCCGTGTGCAATTGCATTCCGTCGTAG

Protein sequence

MMITSATARNHSQLRGPRPPPLTVNKSSSTNISKKSTKNNPLPISNQRHRRSPIIIYLRSPKVIHVRPEEFKSFVQRLTGNRSSVAVVASSCSATGMINDEEFVSVCNCIPS*

Homology

[Close]

BLAST of CsGy3G033410 vs. ExPASy Swiss-Prot
Match: Q9CA36 (VQ motif-containing protein 8, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=VQ8 PE=1 SV=1)

HSP 1 Score: 52.0 bits (123), Expect = 5.2e-06
Identity = 31/69 (44.93%), Postives = 39/69 (56.52%), Query Frame = 0


Query: 12 SQLRGPRPPPLTVNKSSSTNISKKSTKNNPLPISNQRHRRSPIIIYLRSPKVIHVRPEEF 71
          +++ G RP  L +   S T     S K+ P P      R SP+IIY  SPKVIH R E+F
Sbjct: 7  NEINGSRPSSLKLAGESHTIKKTSSCKSKPRP----HGRASPVIIYAHSPKVIHTRAEDF 66

Query: 72 KSFVQRLTG 81
           + VQRLTG
Sbjct: 67 MALVQRLTG 71

[Close]

BLAST of CsGy3G033410 vs. ExPASy Swiss-Prot
Match: Q8LGD5 (Protein MKS1 OS=Arabidopsis thaliana OX=3702 GN=MKS1 PE=1 SV=2)

HSP 1 Score: 51.2 bits (121), Expect = 8.8e-06
Identity = 33/78 (42.31%), Postives = 42/78 (53.85%), Query Frame = 0


Query: 13 QLRGPRPPPLTVNKSSSTNISKKSTKNNPLPISNQRH-----RRSPIIIYLRSPKVIHVR 72
          Q+ GPRP PL+V+K S      K    +P P  N+        R P++IY  SPKV+H  
Sbjct: 23 QICGPRPSPLSVHKDSH---KIKKPPKHPAPPPNRDQPPPYIPREPVVIYAVSPKVVHAT 82

Query: 73 PEEFKSFVQRLTGNRSSV 86
            EF + VQRLTG  S V
Sbjct: 83 ASEFMNVVQRLTGISSGV 97

[Close]

BLAST of CsGy3G033410 vs. ExPASy Swiss-Prot
Match: Q9LS54 (VQ motif-containing protein 20 OS=Arabidopsis thaliana OX=3702 GN=VQ20 PE=2 SV=1)

HSP 1 Score: 48.9 bits (115), Expect = 4.4e-05
Identity = 27/64 (42.19%), Postives = 39/64 (60.94%), Query Frame = 0


Query: 17  PRPPPLTVNKSSSTNISKKSTKNNPLPISNQRHRRSPIIIYLRSPKVIHVRPEEFKSFVQ 76
           P PP L VNK S  ++ KK    +P   S+    R P+IIY  +P++IH  P++F + VQ
Sbjct: 41  PSPPTLKVNKDS--HVIKKPP--SPSSFSSAAKPRHPVIIYTHTPRIIHTNPKDFMALVQ 100

Query: 77  RLTG 81
           +LTG
Sbjct: 101 KLTG 100

[Close]

BLAST of CsGy3G033410 vs. ExPASy Swiss-Prot
Match: F4HWF9 (Nuclear speckle RNA-binding protein B OS=Arabidopsis thaliana OX=3702 GN=NSRB PE=2 SV=1)

HSP 1 Score: 47.4 bits (111), Expect = 1.3e-04
Identity = 33/95 (34.74%), Postives = 45/95 (47.37%), Query Frame = 0


Query: 16  GPRPPPLTVNKSSSTNISKKS-TKNNPLPISNQRHRR---------SPIIIYLRSPKVIH 75
           GP+P PL V   S   I K      +P P   Q H++          P+ IY  +P++IH
Sbjct: 13  GPKPTPLKVRGDSHKIIKKPPLAPPHPQPQPPQTHQQEPSQSRPPPGPVNIYTVTPRIIH 72

Query: 76  VRPEEFKSFVQRLTGNRSSVAVVASSCSATGMIND 101
             P  F + VQRLTG  S+    +SS S+T    D
Sbjct: 73  THPNNFMTLVQRLTGQTSTSTTSSSSSSSTSEPKD 107

[Close]

BLAST of CsGy3G033410 vs. NCBI nr
Match: KGN59247.1 (hypothetical protein Csa_002000 [Cucumis sativus])

HSP 1 Score: 217 bits (553), Expect = 4.93e-71
Identity = 111/112 (99.11%), Postives = 111/112 (99.11%), Query Frame = 0


Query: 1   MMITSATARNHSQLRGPRPPPLTVNKSSSTNISKKSTKNNPLPISNQRHRRSPIIIYLRS 60
           MMITSA ARNHSQLRGPRPPPLTVNKSSSTNISKKSTKNNPLPISNQRHRRSPIIIYLRS
Sbjct: 1   MMITSAAARNHSQLRGPRPPPLTVNKSSSTNISKKSTKNNPLPISNQRHRRSPIIIYLRS 60

Query: 61  PKVIHVRPEEFKSFVQRLTGNRSSVAVVASSCSATGMINDEEFVSVCNCIPS 112
           PKVIHVRPEEFKSFVQRLTGNRSSVAVVASSCSATGMINDEEFVSVCNCIPS
Sbjct: 61  PKVIHVRPEEFKSFVQRLTGNRSSVAVVASSCSATGMINDEEFVSVCNCIPS 112

[Close]

BLAST of CsGy3G033410 vs. NCBI nr
Match: KAA0043778.1 (protein MKS1-like [Cucumis melo var. makuwa] >TYK25355.1 protein MKS1-like [Cucumis melo var. makuwa])

HSP 1 Score: 165 bits (418), Expect = 1.73e-50
Identity = 92/115 (80.00%), Postives = 96/115 (83.48%), Query Frame = 0


Query: 1   MMITSATARNHSQLRGPRPPPLTVNKSSSTNISKKSTKNNPLPISNQRHRRSPIIIYLRS 60
           MM+    ARN SQLRGPRPPPLTVNKSS TNI KKSTKN      NQR+RRSPIIIYLRS
Sbjct: 1   MMMNFTAARNQSQLRGPRPPPLTVNKSS-TNIFKKSTKN-----PNQRNRRSPIIIYLRS 60

Query: 61  PKVIHVRPEEFKSFVQRLTGNRSSVAVVASSCSATGMIND---EEFVSVCNCIPS 112
           PK+IHVRPEEFKSFVQRLTGNRSSVAVVASSCSA+GMI D   EEF S CNCIPS
Sbjct: 61  PKIIHVRPEEFKSFVQRLTGNRSSVAVVASSCSASGMITDHSGEEFASACNCIPS 109

[Close]

BLAST of CsGy3G033410 vs. NCBI nr
Match: XP_008443599.1 (PREDICTED: protein MKS1-like [Cucumis melo])

HSP 1 Score: 161 bits (408), Expect = 5.43e-49
Identity = 90/108 (83.33%), Postives = 93/108 (86.11%), Query Frame = 0


Query: 8   ARNHSQLRGPRPPPLTVNKSSSTNISKKSTKNNPLPISNQRHRRSPIIIYLRSPKVIHVR 67
           ARN SQLRGPRPPPLTVNKSS TNI KKSTKN      NQR+RRSPIIIYLRSPK+IHVR
Sbjct: 6   ARNQSQLRGPRPPPLTVNKSS-TNIFKKSTKN-----PNQRNRRSPIIIYLRSPKIIHVR 65

Query: 68  PEEFKSFVQRLTGNRSSVAVVASSCSATGMIND---EEFVSVCNCIPS 112
           PEEFKSFVQRLTGNRSSVAVVASSCSA+GMI D   EEF S CNCIPS
Sbjct: 66  PEEFKSFVQRLTGNRSSVAVVASSCSASGMITDHSGEEFASACNCIPS 107

[Close]

BLAST of CsGy3G033410 vs. NCBI nr
Match: KAG6596645.1 (VQ motif-containing protein 8, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia] >KAG7028183.1 VQ motif-containing protein 8, chloroplastic, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 129 bits (324), Expect = 3.70e-36
Identity = 79/113 (69.91%), Postives = 86/113 (76.11%), Query Frame = 0


Query: 5   SATARNHS--QLRGPRPPPLTVNKSSSTNISKKSTKNNPLPISNQRHRRSPIIIYLRSPK 64
           ++ ARN    +LRGPRPPPLTVNKSS T I KKST  N  PI N   RR P+I+YLRSPK
Sbjct: 2   NSAARNQLPLRLRGPRPPPLTVNKSS-TKIFKKSTTTNLRPIPN---RRDPVIVYLRSPK 61

Query: 65  VIHVRPEEFKSFVQRLTGNRSSVAVVASSCSATGMIND---EEFVSVCNCIPS 112
           +IHVRPEEFKSFVQRLTGN SSVAVVA+S SATGMI D   E  VS CN IPS
Sbjct: 62  IIHVRPEEFKSFVQRLTGNGSSVAVVAASFSATGMIADHPGEVCVSACNYIPS 110

[Close]

BLAST of CsGy3G033410 vs. NCBI nr
Match: KAE8125233.1 (hypothetical protein FH972_020066 [Carpinus fangiana])

HSP 1 Score: 79.0 bits (193), Expect = 3.04e-16
Identity = 48/96 (50.00%), Postives = 59/96 (61.46%), Query Frame = 0


Query: 7   TARNHSQLRGPRPPPLTVNKSSSTNISKKSTKNNPLPISNQRHRRSPIIIYLRSPKVIHV 66
           +++   QL+GPRP  L V KSS+     K  KN P P    R R SP+IIYL SPKVIHV
Sbjct: 2   SSQTRKQLQGPRPALLMVGKSST-----KIIKNRPFPAG--RSRCSPVIIYLESPKVIHV 61

Query: 67  RPEEFKSFVQRLTGNRSSVAVVASSCSATGMINDEE 102
           RPEEF   VQRLTGN  +  + +S  S+  M+ DE 
Sbjct: 62  RPEEFMDTVQRLTGNIQAPCIPSSPPSSCAMVADEN 90

[Close]

BLAST of CsGy3G033410 vs. ExPASy TrEMBL
Match: A0A0A0LEW5 (VQ domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G785410 PE=4 SV=1)

HSP 1 Score: 217 bits (553), Expect = 2.39e-71
Identity = 111/112 (99.11%), Postives = 111/112 (99.11%), Query Frame = 0


Query: 1   MMITSATARNHSQLRGPRPPPLTVNKSSSTNISKKSTKNNPLPISNQRHRRSPIIIYLRS 60
           MMITSA ARNHSQLRGPRPPPLTVNKSSSTNISKKSTKNNPLPISNQRHRRSPIIIYLRS
Sbjct: 1   MMITSAAARNHSQLRGPRPPPLTVNKSSSTNISKKSTKNNPLPISNQRHRRSPIIIYLRS 60

Query: 61  PKVIHVRPEEFKSFVQRLTGNRSSVAVVASSCSATGMINDEEFVSVCNCIPS 112
           PKVIHVRPEEFKSFVQRLTGNRSSVAVVASSCSATGMINDEEFVSVCNCIPS
Sbjct: 61  PKVIHVRPEEFKSFVQRLTGNRSSVAVVASSCSATGMINDEEFVSVCNCIPS 112

[Close]

BLAST of CsGy3G033410 vs. ExPASy TrEMBL
Match: A0A5D3DP92 (Protein MKS1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G004940 PE=4 SV=1)

HSP 1 Score: 165 bits (418), Expect = 8.37e-51
Identity = 92/115 (80.00%), Postives = 96/115 (83.48%), Query Frame = 0


Query: 1   MMITSATARNHSQLRGPRPPPLTVNKSSSTNISKKSTKNNPLPISNQRHRRSPIIIYLRS 60
           MM+    ARN SQLRGPRPPPLTVNKSS TNI KKSTKN      NQR+RRSPIIIYLRS
Sbjct: 1   MMMNFTAARNQSQLRGPRPPPLTVNKSS-TNIFKKSTKN-----PNQRNRRSPIIIYLRS 60

Query: 61  PKVIHVRPEEFKSFVQRLTGNRSSVAVVASSCSATGMIND---EEFVSVCNCIPS 112
           PK+IHVRPEEFKSFVQRLTGNRSSVAVVASSCSA+GMI D   EEF S CNCIPS
Sbjct: 61  PKIIHVRPEEFKSFVQRLTGNRSSVAVVASSCSASGMITDHSGEEFASACNCIPS 109

[Close]

BLAST of CsGy3G033410 vs. ExPASy TrEMBL
Match: A0A1S3B975 (protein MKS1-like OS=Cucumis melo OX=3656 GN=LOC103487155 PE=4 SV=1)

HSP 1 Score: 161 bits (408), Expect = 2.63e-49
Identity = 90/108 (83.33%), Postives = 93/108 (86.11%), Query Frame = 0


Query: 8   ARNHSQLRGPRPPPLTVNKSSSTNISKKSTKNNPLPISNQRHRRSPIIIYLRSPKVIHVR 67
           ARN SQLRGPRPPPLTVNKSS TNI KKSTKN      NQR+RRSPIIIYLRSPK+IHVR
Sbjct: 6   ARNQSQLRGPRPPPLTVNKSS-TNIFKKSTKN-----PNQRNRRSPIIIYLRSPKIIHVR 65

Query: 68  PEEFKSFVQRLTGNRSSVAVVASSCSATGMIND---EEFVSVCNCIPS 112
           PEEFKSFVQRLTGNRSSVAVVASSCSA+GMI D   EEF S CNCIPS
Sbjct: 66  PEEFKSFVQRLTGNRSSVAVVASSCSASGMITDHSGEEFASACNCIPS 107

[Close]

BLAST of CsGy3G033410 vs. ExPASy TrEMBL
Match: A0A2N9GB07 (VQ domain-containing protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS24585 PE=4 SV=1)

HSP 1 Score: 85.5 bits (210), Expect = 1.20e-18
Identity = 52/91 (57.14%), Postives = 62/91 (68.13%), Query Frame = 0


Query: 3  ITSATARNHSQLRGPRPPPLTVNKSSSTNISKKSTKNNPLPISNQRHRRSPIIIYLRSPK 62
          + S T + + QL+GPRP PLTVNKSS T I K+     PLP    R R SP+IIYL+SPK
Sbjct: 1  MDSQTRKKYLQLQGPRPAPLTVNKSS-TKIKKQ-----PLP---NRTRSSPVIIYLQSPK 60

Query: 63 VIHVRPEEFKSFVQRLTGNRSSVAVVASSCS 93
          VIHVRPEEF   VQ+LTGN++   V A S S
Sbjct: 61 VIHVRPEEFMGIVQQLTGNQAPSRVAADSSS 82

[Close]

BLAST of CsGy3G033410 vs. ExPASy TrEMBL
Match: A0A5N6RVJ8 (VQ domain-containing protein OS=Carpinus fangiana OX=176857 GN=FH972_020066 PE=4 SV=1)

HSP 1 Score: 79.0 bits (193), Expect = 1.47e-16
Identity = 48/96 (50.00%), Postives = 59/96 (61.46%), Query Frame = 0


Query: 7   TARNHSQLRGPRPPPLTVNKSSSTNISKKSTKNNPLPISNQRHRRSPIIIYLRSPKVIHV 66
           +++   QL+GPRP  L V KSS+     K  KN P P    R R SP+IIYL SPKVIHV
Sbjct: 2   SSQTRKQLQGPRPALLMVGKSST-----KIIKNRPFPAG--RSRCSPVIIYLESPKVIHV 61

Query: 67  RPEEFKSFVQRLTGNRSSVAVVASSCSATGMINDEE 102
           RPEEF   VQRLTGN  +  + +S  S+  M+ DE 
Sbjct: 62  RPEEFMDTVQRLTGNIQAPCIPSSPPSSCAMVADEN 90

[Close]

BLAST of CsGy3G033410 vs. TAIR 10
Match: AT1G68450.1 (VQ motif-containing protein )

HSP 1 Score: 52.0 bits (123), Expect = 3.7e-07
Identity = 31/69 (44.93%), Postives = 39/69 (56.52%), Query Frame = 0


Query: 12 SQLRGPRPPPLTVNKSSSTNISKKSTKNNPLPISNQRHRRSPIIIYLRSPKVIHVRPEEF 71
          +++ G RP  L +   S T     S K+ P P      R SP+IIY  SPKVIH R E+F
Sbjct: 7  NEINGSRPSSLKLAGESHTIKKTSSCKSKPRP----HGRASPVIIYAHSPKVIHTRAEDF 66

Query: 72 KSFVQRLTG 81
           + VQRLTG
Sbjct: 67 MALVQRLTG 71

[Close]

BLAST of CsGy3G033410 vs. TAIR 10
Match: AT3G18690.1 (MAP kinase substrate 1 )

HSP 1 Score: 51.2 bits (121), Expect = 6.3e-07
Identity = 33/78 (42.31%), Postives = 42/78 (53.85%), Query Frame = 0


Query: 13 QLRGPRPPPLTVNKSSSTNISKKSTKNNPLPISNQRH-----RRSPIIIYLRSPKVIHVR 72
          Q+ GPRP PL+V+K S      K    +P P  N+        R P++IY  SPKV+H  
Sbjct: 23 QICGPRPSPLSVHKDSH---KIKKPPKHPAPPPNRDQPPPYIPREPVVIYAVSPKVVHAT 82

Query: 73 PEEFKSFVQRLTGNRSSV 86
            EF + VQRLTG  S V
Sbjct: 83 ASEFMNVVQRLTGISSGV 97

[Close]

BLAST of CsGy3G033410 vs. TAIR 10
Match: AT1G21326.1 (VQ motif-containing protein )

HSP 1 Score: 49.7 bits (117), Expect = 1.8e-06
Identity = 35/95 (36.84%), Postives = 45/95 (47.37%), Query Frame = 0


Query: 16  GPRPPPLTVNKSSSTNISKKS-TKNNPLPISNQRHRR---------SPIIIYLRSPKVIH 75
           GPRP PL V   S   I K      +P P   Q H++          P+IIY  SP++IH
Sbjct: 13  GPRPIPLKVRGDSHKIIKKPPLAPPHPQPQPPQTHQQEPSQSRPPPGPVIIYTVSPRIIH 72

Query: 76  VRPEEFKSFVQRLTGNRSSVAVVASSCSATGMIND 101
             P  F + VQRLTG  S+    +S  S+T    D
Sbjct: 73  THPNNFMTLVQRLTGKTSTSTTSSSYSSSTSAPKD 107

[Close]

BLAST of CsGy3G033410 vs. TAIR 10
Match: AT3G18360.1 (VQ motif-containing protein )

HSP 1 Score: 48.9 bits (115), Expect = 3.1e-06
Identity = 27/64 (42.19%), Postives = 39/64 (60.94%), Query Frame = 0


Query: 17  PRPPPLTVNKSSSTNISKKSTKNNPLPISNQRHRRSPIIIYLRSPKVIHVRPEEFKSFVQ 76
           P PP L VNK S  ++ KK    +P   S+    R P+IIY  +P++IH  P++F + VQ
Sbjct: 41  PSPPTLKVNKDS--HVIKKPP--SPSSFSSAAKPRHPVIIYTHTPRIIHTNPKDFMALVQ 100

Query: 77  RLTG 81
           +LTG
Sbjct: 101 KLTG 100

[Close]

BLAST of CsGy3G033410 vs. TAIR 10
Match: AT1G21320.1 (nucleotide binding;nucleic acid binding )

HSP 1 Score: 47.4 bits (111), Expect = 9.0e-06
Identity = 33/95 (34.74%), Postives = 45/95 (47.37%), Query Frame = 0


Query: 16  GPRPPPLTVNKSSSTNISKKS-TKNNPLPISNQRHRR---------SPIIIYLRSPKVIH 75
           GP+P PL V   S   I K      +P P   Q H++          P+ IY  +P++IH
Sbjct: 13  GPKPTPLKVRGDSHKIIKKPPLAPPHPQPQPPQTHQQEPSQSRPPPGPVNIYTVTPRIIH 72

Query: 76  VRPEEFKSFVQRLTGNRSSVAVVASSCSATGMIND 101
             P  F + VQRLTG  S+    +SS S+T    D
Sbjct: 73  THPNNFMTLVQRLTGQTSTSTTSSSSSSSTSEPKD 107

The following BLAST results are available for this feature:

BLAST of CsGy3G033410 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9CA36	5.2e-06	44.93	VQ motif-containing protein 8, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=...	[more]
Q8LGD5	8.8e-06	42.31	Protein MKS1 OS=Arabidopsis thaliana OX=3702 GN=MKS1 PE=1 SV=2	[more]
Q9LS54	4.4e-05	42.19	VQ motif-containing protein 20 OS=Arabidopsis thaliana OX=3702 GN=VQ20 PE=2 SV=1	[more]
F4HWF9	1.3e-04	34.74	Nuclear speckle RNA-binding protein B OS=Arabidopsis thaliana OX=3702 GN=NSRB PE...	[more]

BLAST of CsGy3G033410 vs. NCBI nr


Match Name	E-value	Identity	Description
KGN59247.1	4.93e-71	99.11	hypothetical protein Csa_002000 [Cucumis sativus]	[more]
KAA0043778.1	1.73e-50	80.00	protein MKS1-like [Cucumis melo var. makuwa] >TYK25355.1 protein MKS1-like [Cucu...	[more]
XP_008443599.1	5.43e-49	83.33	PREDICTED: protein MKS1-like [Cucumis melo]	[more]
KAG6596645.1	3.70e-36	69.91	VQ motif-containing protein 8, chloroplastic, partial [Cucurbita argyrosperma su...	[more]
KAE8125233.1	3.04e-16	50.00	hypothetical protein FH972_020066 [Carpinus fangiana]	[more]

BLAST of CsGy3G033410 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LEW5	2.39e-71	99.11	VQ domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G785410 PE=4 SV=...	[more]
A0A5D3DP92	8.37e-51	80.00	Protein MKS1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G00...	[more]
A0A1S3B975	2.63e-49	83.33	protein MKS1-like OS=Cucumis melo OX=3656 GN=LOC103487155 PE=4 SV=1	[more]
A0A2N9GB07	1.20e-18	57.14	VQ domain-containing protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS24585 PE=4 ...	[more]
A0A5N6RVJ8	1.47e-16	50.00	VQ domain-containing protein OS=Carpinus fangiana OX=176857 GN=FH972_020066 PE=4...	[more]

BLAST of CsGy3G033410 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G68450.1	3.7e-07	44.93	VQ motif-containing protein	[more]
AT3G18690.1	6.3e-07	42.31	MAP kinase substrate 1	[more]
AT1G21326.1	1.8e-06	36.84	VQ motif-containing protein	[more]
AT3G18360.1	3.1e-06	42.19	VQ motif-containing protein	[more]
AT1G21320.1	9.0e-06	34.74	nucleotide binding;nucleic acid binding	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (Gy14) v2.1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR008889	VQ	PFAM	PF05678	VQ	coord: 60..82 e-value: 4.2E-8 score: 32.5
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..47
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 22..47
None	No IPR available	PANTHER	PTHR33143:SF51	PROTEIN MKS1-LIKE	coord: 6..99
IPR039607	VQ motif-containing protein 8/17/18/20/21/25	PANTHER	PTHR33143	F16F4.1 PROTEIN-RELATED	coord: 6..99

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsGy3G033410.1	CsGy3G033410.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005634	nucleus