CsGy3G029505 (gene) Cucumber (Gy14) v2.1

Overview


Name	CsGy3G029505
Type	gene
Organism	Cucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
Description	Unknown protein
Location	Gy14Chr3: 29974621 .. 29974998 (+)
RNA-Seq Expression	CsGy3G029505
Synteny	CsGy3G029505

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAATAAAACAGAGAAGGCTGATAAACAAAGCAGTCGGAAAATTGAAAACGAAATGCAGAAACATCCCACTTTGAGGAGAAGAATTCTGAGATTGAAACGAAAGTAAAGTTTTGCCATAAAACCCTAATTAATTGTGGCACTCATACATTGGAAATCTTCCAGATTCAACATTACATTCAGAAAGAAGCTAACCTACAAAGAGGAAAACTATGTGATTCGCTTCCTCCGTACAGTCGTCAGTCCGTCCTTCGTCCTTTCGCTTCTTCGCTCCCAAATGGAAGAAGAAGGGTTGTCCGATTCCGATATATCAGTGAATAGAACGACACGTCGTCAACTTTCTGGCGCCACTAAACTTTCATACGACGCGTCGTCTTAA

mRNA sequence

ATGAATAAAACAGAGAAGGCTGATAAACAAAGCAGTCGGAAAATTGAAAACGAAATGCAGAAACATCCCACTTTGAGGAGAAGAATTCTGAGATTGAAACGAAAAAAGAAGCTAACCTACAAAGAGGAAAACTATGTGATTCGCTTCCTCCGTACAGTCGTCAGTCCGTCCTTCGTCCTTTCGCTTCTTCGCTCCCAAATGGAAGAAGAAGGGTTGTCCGATTCCGATATATCAGTGAATAGAACGACACGTCGTCAACTTTCTGGCGCCACTAAACTTTCATACGACGCGTCGTCTTAA

Coding sequence (CDS)

ATGAATAAAACAGAGAAGGCTGATAAACAAAGCAGTCGGAAAATTGAAAACGAAATGCAGAAACATCCCACTTTGAGGAGAAGAATTCTGAGATTGAAACGAAAAAAGAAGCTAACCTACAAAGAGGAAAACTATGTGATTCGCTTCCTCCGTACAGTCGTCAGTCCGTCCTTCGTCCTTTCGCTTCTTCGCTCCCAAATGGAAGAAGAAGGGTTGTCCGATTCCGATATATCAGTGAATAGAACGACACGTCGTCAACTTTCTGGCGCCACTAAACTTTCATACGACGCGTCGTCTTAA

Protein sequence

MNKTEKADKQSSRKIENEMQKHPTLRRRILRLKRKKKLTYKEENYVIRFLRTVVSPSFVLSLLRSQMEEEGLSDSDISVNRTTRRQLSGATKLSYDASS*

Homology

[Close]

BLAST of CsGy3G029505 vs. NCBI nr
Match: KGN58803.1 (hypothetical protein Csa_001740 [Cucumis sativus])

HSP 1 Score: 181 bits (458), Expect = 5.92e-57
Identity = 99/99 (100.00%), Postives = 99/99 (100.00%), Query Frame = 0


Query: 1  MNKTEKADKQSSRKIENEMQKHPTLRRRILRLKRKKKLTYKEENYVIRFLRTVVSPSFVL 60
          MNKTEKADKQSSRKIENEMQKHPTLRRRILRLKRKKKLTYKEENYVIRFLRTVVSPSFVL
Sbjct: 1  MNKTEKADKQSSRKIENEMQKHPTLRRRILRLKRKKKLTYKEENYVIRFLRTVVSPSFVL 60

Query: 61 SLLRSQMEEEGLSDSDISVNRTTRRQLSGATKLSYDASS 99
          SLLRSQMEEEGLSDSDISVNRTTRRQLSGATKLSYDASS
Sbjct: 61 SLLRSQMEEEGLSDSDISVNRTTRRQLSGATKLSYDASS 99

[Close]

BLAST of CsGy3G029505 vs. ExPASy TrEMBL
Match: A0A0A0LAB8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G732600 PE=4 SV=1)

HSP 1 Score: 181 bits (458), Expect = 2.87e-57
Identity = 99/99 (100.00%), Postives = 99/99 (100.00%), Query Frame = 0


Query: 1  MNKTEKADKQSSRKIENEMQKHPTLRRRILRLKRKKKLTYKEENYVIRFLRTVVSPSFVL 60
          MNKTEKADKQSSRKIENEMQKHPTLRRRILRLKRKKKLTYKEENYVIRFLRTVVSPSFVL
Sbjct: 1  MNKTEKADKQSSRKIENEMQKHPTLRRRILRLKRKKKLTYKEENYVIRFLRTVVSPSFVL 60

Query: 61 SLLRSQMEEEGLSDSDISVNRTTRRQLSGATKLSYDASS 99
          SLLRSQMEEEGLSDSDISVNRTTRRQLSGATKLSYDASS
Sbjct: 61 SLLRSQMEEEGLSDSDISVNRTTRRQLSGATKLSYDASS 99

The following BLAST results are available for this feature:

BLAST of CsGy3G029505 vs.


Match Name	E-value	Identity	Description

BLAST of CsGy3G029505 vs. NCBI nr


Match Name	E-value	Identity	Description
KGN58803.1	5.92e-57	100.00	hypothetical protein Csa_001740 [Cucumis sativus]	[more]

BLAST of CsGy3G029505 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LAB8	2.87e-57	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G732600 PE=4 SV=1	[more]

BLAST of CsGy3G029505 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Cucumber (Gy14) v2.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..26
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..25

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsGy3G029505.1	CsGy3G029505.1	mRNA