CsGy3G028755 (gene) Cucumber (Gy14) v2.1

Overview
NameCsGy3G028755
Typegene
OrganismCucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
DescriptionUnknown protein
LocationGy14Chr3: 29581942 .. 29582827 (+)
RNA-Seq ExpressionCsGy3G028755
SyntenyCsGy3G028755
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGATAGCGCCGCGATAGAGAAATCGCCAACCTGGAAAGGGAACCGCCTTCAATCAACGGCGCTATCCCTCCTGAGCTTCAGAGGATTCTTCTTAACTTCAGTCGATGTTTCCAACAGCGGCAAACCATTGTTATTAAGTAGAGAGAGAAAAAACAAACGTAGGATGATGGGAAACACAGTGAGAAATGGCAATAGGGAATTGGTTAGAAGATGATATTGTATAATTGATGAAGAATAGTACTCGTAATCTTGATGAAGAGTATGGGAGGACACTGTTTAGCCTGTGAATGGTCGGAATGTAGTTTCACCCCTTTTCTTCTTTCCTTTTGACTACTCTACACCATCTTGCCGACTACGATGCTTTACACTTTTCTTGCGCTGCATTCCCCAACGCTGCAGCAAGGCAATGCACGACTGAAATACTAAAGCAGGAGTACTTAACGAAATTAATACCAATTGAAGACTGGGGCAATATTGAGAACAGTATCAGCAAAGATTTTGATTATTGGCTGTATTGCTAGAAAAAGGAGAAAGATGTTTTGATCGTGCAATGACAAGGCCGAATAATGCACCACCTGTTTCAAATGTTAGGTAGTAATTTAAACAACTTTCGTATAGCCATTTTTGAAATTATTGGAACACCGGTGATGGGTCGTTTTAAGTGAATTATGCGTGTGTACTGAGGTCTAAATTTATAGAATGGAGTTAAATCATATGCAAAAATATGTATACGAATAATAATAGTCGATGGAACAATGAAAGAAGAAAGAGATGGTTTTAAATAGATGGGAACTTGGGCTTGGAGCCCAAGCTTGGATCTACTTTACGATCCAAGTGCGGACTGGGGTGGGACAAATGGTTTGAACCCAAACGAACCATTTTAA

mRNA sequence

ATGGATAGCGCCGCGATAGAGAAATCGCCAACCTGGAAAGGGAACCGCCTTCAATCAACGGCGCTATCCCTCCTGAGCTTCAGAGGATTCTTCTTAACTTCAGTCGATGTTTCCAACAGCGGCAAACCATTGTTATTAAGTAGAGAGAGAAAAAACAAACGTAGGATGATGGGAAACACAGTGAGAAATGGCAATAGGGAATTGTTTCACCCCTTTTCTTCTTTCCTTTTGACTACTCTACACCATCTTGCCGACTACGATGCTTTACACTTTTCTTGCGCTGCATTCCCCAACGCTGCAGCAAGGCAATGCACGACTGAAATACTAAAGCAGGAGTACTTAACGAAATTAATACCAATTGAAGACTGGGGCAATATTGAGAACAAAAAAGGAGAAAGATGTTTTGATCGTGCAATGACAAGGCCGAATAATGCACCACCTGTTTCAAATATGGGAACTTGGGCTTGGAGCCCAAGCTTGGATCTACTTTACGATCCAAGTGCGGACTGGGGTGGGACAAATGGTTTGAACCCAAACGAACCATTTTAA

Coding sequence (CDS)

ATGGATAGCGCCGCGATAGAGAAATCGCCAACCTGGAAAGGGAACCGCCTTCAATCAACGGCGCTATCCCTCCTGAGCTTCAGAGGATTCTTCTTAACTTCAGTCGATGTTTCCAACAGCGGCAAACCATTGTTATTAAGTAGAGAGAGAAAAAACAAACGTAGGATGATGGGAAACACAGTGAGAAATGGCAATAGGGAATTGTTTCACCCCTTTTCTTCTTTCCTTTTGACTACTCTACACCATCTTGCCGACTACGATGCTTTACACTTTTCTTGCGCTGCATTCCCCAACGCTGCAGCAAGGCAATGCACGACTGAAATACTAAAGCAGGAGTACTTAACGAAATTAATACCAATTGAAGACTGGGGCAATATTGAGAACAAAAAAGGAGAAAGATGTTTTGATCGTGCAATGACAAGGCCGAATAATGCACCACCTGTTTCAAATATGGGAACTTGGGCTTGGAGCCCAAGCTTGGATCTACTTTACGATCCAAGTGCGGACTGGGGTGGGACAAATGGTTTGAACCCAAACGAACCATTTTAA

Protein sequence

MDSAAIEKSPTWKGNRLQSTALSLLSFRGFFLTSVDVSNSGKPLLLSRERKNKRRMMGNTVRNGNRELFHPFSSFLLTTLHHLADYDALHFSCAAFPNAAARQCTTEILKQEYLTKLIPIEDWGNIENKKGERCFDRAMTRPNNAPPVSNMGTWAWSPSLDLLYDPSADWGGTNGLNPNEPF*
Homology
[Close]
BLAST of CsGy3G028755 vs. NCBI nr
Match: KAE8650975.1 (hypothetical protein Csa_001201 [Cucumis sativus])

HSP 1 Score: 374 bits (960), Expect = 7.96e-131
Identity = 180/182 (98.90%), Postives = 180/182 (98.90%), Query Frame = 0 

Query: 1   MDSAAIEKSPTWKGNRLQSTALSLLSFRGFFLTSVDVSNSGKPLLLSRERKNKRRMMGNT 60
           MDSAAIEKSPT K NRLQSTALSLLSFRGFFLTSVDVSNSGKPLLLSRERKNKRRMMGNT
Sbjct: 1   MDSAAIEKSPTRKRNRLQSTALSLLSFRGFFLTSVDVSNSGKPLLLSRERKNKRRMMGNT 60

Query: 61  VRNGNRELFHPFSSFLLTTLHHLADYDALHFSCAAFPNAAARQCTTEILKQEYLTKLIPI 120
           VRNGNRELFHPFSSFLLTTLHHLADYDALHFSCAAFPNAAARQCTTEILKQEYLTKLIPI
Sbjct: 61  VRNGNRELFHPFSSFLLTTLHHLADYDALHFSCAAFPNAAARQCTTEILKQEYLTKLIPI 120

Query: 121 EDWGNIENKKGERCFDRAMTRPNNAPPVSNMGTWAWSPSLDLLYDPSADWGGTNGLNPNE 180
           EDWGNIENKKGERCFDRAMTRPNNAPPVSNMGTWAWSPSLDLLYDPSADWGGTNGLNPNE
Sbjct: 121 EDWGNIENKKGERCFDRAMTRPNNAPPVSNMGTWAWSPSLDLLYDPSADWGGTNGLNPNE 180

Query: 181 PF 182
           PF
Sbjct: 181 PF 182

[Close]
BLAST of CsGy3G028755 vs. ExPASy TrEMBL
Match: A0A0A0LA48 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G730870 PE=4 SV=1)

HSP 1 Score: 250 bits (639), Expect = 5.65e-82
Identity = 126/128 (98.44%), Postives = 126/128 (98.44%), Query Frame = 0 

Query: 1   MDSAAIEKSPTWKGNRLQSTALSLLSFRGFFLTSVDVSNSGKPLLLSRERKNKRRMMGNT 60
           MDSAAIEKSPT K NRLQSTALSLLSFRGFFLTSVDVSNSGKPLLLSRERKNKRRMMGNT
Sbjct: 60  MDSAAIEKSPTRKRNRLQSTALSLLSFRGFFLTSVDVSNSGKPLLLSRERKNKRRMMGNT 119

Query: 61  VRNGNRELFHPFSSFLLTTLHHLADYDALHFSCAAFPNAAARQCTTEILKQEYLTKLIPI 120
           VRNGNRELFHPFSSFLLTTLHHLADYDALHFSCAAFPNAAARQCTTEILKQEYLTKLIPI
Sbjct: 120 VRNGNRELFHPFSSFLLTTLHHLADYDALHFSCAAFPNAAARQCTTEILKQEYLTKLIPI 179

Query: 121 EDWGNIEN 128
           EDWGNIEN
Sbjct: 180 EDWGNIEN 187

The following BLAST results are available for this feature:
BLAST of CsGy3G028755 vs.
Match NameE-valueIdentityDescription
BLAST of CsGy3G028755 vs. NCBI nr
Match NameE-valueIdentityDescription
KAE8650975.17.96e-13198.90hypothetical protein Csa_001201 [Cucumis sativus][more]
BLAST of CsGy3G028755 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LA485.65e-8298.44Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G730870 PE=4 SV=1[more]
BLAST of CsGy3G028755 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsGy3G028755.1CsGy3G028755.1mRNA