CsGy3G027480 (gene) Cucumber (Gy14) v2.1
Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.AAATTCGACACGTCCTTCCCTTTTGACAACCGACTTCCCCCATAACTACCCGCCACGTGTCCTTCCAGAATCCCCCATCTCTTTTTCTTTTTTATTTAACCCTTCAAATTAAATACACACAAAAAGGAAAAGCTGTTTGATTCAGTGAAAACGAAATTGTTAAAATGGCTGTTGCTGAAGAACCCATTCTCTCTCGTTTGGACCGGCTGGATGTGATGGTGAGTTTAGTTACTTTTATTTTCAGCTCCAATGGTTAACTCATTTTTTTCTTTTTCTTTTTTTAATATGTTCTTGGTGTGGTGTACTAGACAAGGTGGGGGAAAACGATGGGGGTTTTGCTGTTTGTTTCTCGGGGAATTGACTGGGAAAATTACAAGGGTTTGGTTGGTGAGAGATTCGTGGCTTAGCTACATGGGCTGTCTACTTCTTTTTCTTTCATTATTTTAAAATATTATGATTCGCTTTGTAATTCTGATGTTGATGTTTTATTTCTTTCTATCTATTTATCTTTCGTTTTATTTCTAAATTATGGAGTACAATGGCTTCTTCTAATTTTTGGTCGGTGTAATTTTGAAAACGTCTATTTCAATCAATCTACTTTTTAAGAGTATGTATTGTTTTAAATGAAAGTTATAGTACCAAGTGAAGGACTTGAGAATATATATTAATTTCACACTAATTAACACAAATTCCAAATTAATAATTGTGCCATTTGATTTTTTTTAGTCCAAGTTTTTACGATGTTTATATGTACTTTAATTTGACAGCAAAGCCATTGATGGGTAAGCAAGGAAGAATTATATTAGTTCAATTGAGTTGCATATTAACTATATATTTTTTAAGGTTAATGTTTGATTATTTGGTTTTATGCTTGAGATTATTATTATAATTTAATTTATACATGATTCATCTTACAATTTGACTATTTTCTCCTTTATTATAAAATTAAGCAAAAAAAAATATTAATATCATAAGGTGCATAATTTCACCGACTACAAATTTAAGTATCCTCTCGAGTAGAGGAAAATTGGAAATAATTGGGTTTATATATATATATATAAATGTTATTATGAACGAAATAATAAAGAAATATAAATGTTTGTTGTAATAGTTGAGGCGGCTGGAGGAAATTAGAGGGTGCGGTAAGTCTTCAAAAAGTTCGTGTGCATCCACTCCATCAAGTGGGACCCTAACGAGCGACTATCACACATCGTCCGTTGATCTGTCCCCAAAAAGCCTGGAGAAGCACTGTCGTCCGATCAACCACGTCGTCAAAGTCGCTGAACTCAAAGGAAGCCTCGTTGAGAGAATGGATAATCTCGAGGATAGAGTCCTCAAGGTAGAAAAAATAATTAATTATTAGAATATTGTTGATAGATTTATGCATTAATTCATTCATATTGCTATGCTGTTAATACTCTCTTCTGACATGGAGTGGAACTTTTTGAAACAGCTTTGTATACAAGTAGAGGGAGATTTAGAAAGGGAGAAGGATATGATAATGGTCGAGAAGAAGGAGAGGAAACCCAAGAGAAGCTTTAAACAACTTGTTCAACGGTGCATGACTGGGCAGGGAACAAGACGCGACTCGTGGTCTTGATCTTGACCATGTTTGTTTATTCGTTTTTCTTGTTTGTAGGACTTAATTTTCTTTTTAGTACGTAATTTCTTGAGTTGCTAAAGTTAATTATGTTTTTGTTCCTCTTAACCACTTGTACAACCTTTTAGGTCTCTTGTTGAAGATGTTTATAAAATTTTGTTGGGCAGTATATGTGGCACATCCATCATTTTCTTTTTTTCACTTTTGAGATGTGGATGAAGATGAAAAAGCTGCTTTAATTTGAGGGAGGACTGG AAATTCGACACGTCCTTCCCTTTTGACAACCGACTTCCCCCATAACTACCCGCCACGTGTCCTTCCAGAATCCCCCATCTCTTTTTCTTTTTTATTTAACCCTTCAAATTAAATACACACAAAAAGGAAAAGCTGTTTGATTCAGTGAAAACGAAATTGTTAAAATGGCTGTTGCTGAAGAACCCATTCTCTCTCGTTTGGACCGGCTGGATGTGATGTTGAGGCGGCTGGAGGAAATTAGAGGGTGCGGTAAGTCTTCAAAAAGTTCGTGTGCATCCACTCCATCAAGTGGGACCCTAACGAGCGACTATCACACATCGTCCGTTGATCTGTCCCCAAAAAGCCTGGAGAAGCACTGTCGTCCGATCAACCACGTCGTCAAAGTCGCTGAACTCAAAGGAAGCCTCGTTGAGAGAATGGATAATCTCGAGGATAGAGTCCTCAAGCTTTGTATACAAGTAGAGGGAGATTTAGAAAGGGAGAAGGATATGATAATGGTCGAGAAGAAGGAGAGGAAACCCAAGAGAAGCTTTAAACAACTTGTTCAACGGTGCATGACTGGGCAGGGAACAAGACGCGACTCGTGGTCTTGATCTTGACCATGTTTGTTTATTCGTTTTTCTTGTTTGTAGGACTTAATTTTCTTTTTAGTACGTAATTTCTTGAGTTGCTAAAGTTAATTATGTTTTTGTTCCTCTTAACCACTTGTACAACCTTTTAGGTCTCTTGTTGAAGATGTTTATAAAATTTTGTTGGGCAGTATATGTGGCACATCCATCATTTTCTTTTTTTCACTTTTGAGATGTGGATGAAGATGAAAAAGCTGCTTTAATTTGAGGGAGGACTGG ATGGCTGTTGCTGAAGAACCCATTCTCTCTCGTTTGGACCGGCTGGATGTGATGTTGAGGCGGCTGGAGGAAATTAGAGGGTGCGGTAAGTCTTCAAAAAGTTCGTGTGCATCCACTCCATCAAGTGGGACCCTAACGAGCGACTATCACACATCGTCCGTTGATCTGTCCCCAAAAAGCCTGGAGAAGCACTGTCGTCCGATCAACCACGTCGTCAAAGTCGCTGAACTCAAAGGAAGCCTCGTTGAGAGAATGGATAATCTCGAGGATAGAGTCCTCAAGCTTTGTATACAAGTAGAGGGAGATTTAGAAAGGGAGAAGGATATGATAATGGTCGAGAAGAAGGAGAGGAAACCCAAGAGAAGCTTTAAACAACTTGTTCAACGGTGCATGACTGGGCAGGGAACAAGACGCGACTCGTGGTCTTGA MAVAEEPILSRLDRLDVMLRRLEEIRGCGKSSKSSCASTPSSGTLTSDYHTSSVDLSPKSLEKHCRPINHVVKVAELKGSLVERMDNLEDRVLKLCIQVEGDLEREKDMIMVEKKERKPKRSFKQLVQRCMTGQGTRRDSWS* Homology
BLAST of CsGy3G027480 vs. NCBI nr
Match: XP_004151057.1 (uncharacterized protein LOC101205386 [Cucumis sativus] >KGN58589.1 hypothetical protein Csa_001276 [Cucumis sativus]) HSP 1 Score: 274 bits (701), Expect = 1.22e-92 Identity = 141/142 (99.30%), Postives = 141/142 (99.30%), Query Frame = 0
BLAST of CsGy3G027480 vs. NCBI nr
Match: XP_008461800.1 (PREDICTED: uncharacterized protein LOC103500315 [Cucumis melo] >KAA0048356.1 uncharacterized protein E6C27_scaffold264G00740 [Cucumis melo var. makuwa]) HSP 1 Score: 251 bits (640), Expect = 2.53e-83 Identity = 128/143 (89.51%), Postives = 138/143 (96.50%), Query Frame = 0
BLAST of CsGy3G027480 vs. NCBI nr
Match: XP_038905600.1 (uncharacterized protein LOC120091575 [Benincasa hispida]) HSP 1 Score: 233 bits (595), Expect = 1.55e-76 Identity = 119/138 (86.23%), Postives = 131/138 (94.93%), Query Frame = 0
BLAST of CsGy3G027480 vs. NCBI nr
Match: KAG6606879.1 (hypothetical protein SDJN03_00221, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 229 bits (583), Expect = 1.19e-74 Identity = 116/138 (84.06%), Postives = 129/138 (93.48%), Query Frame = 0
BLAST of CsGy3G027480 vs. NCBI nr
Match: XP_022949377.1 (uncharacterized protein LOC111452747 [Cucurbita moschata]) HSP 1 Score: 227 bits (579), Expect = 4.86e-74 Identity = 116/138 (84.06%), Postives = 128/138 (92.75%), Query Frame = 0
BLAST of CsGy3G027480 vs. ExPASy TrEMBL
Match: A0A0A0LCD9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G695850 PE=4 SV=1) HSP 1 Score: 274 bits (701), Expect = 5.91e-93 Identity = 141/142 (99.30%), Postives = 141/142 (99.30%), Query Frame = 0
BLAST of CsGy3G027480 vs. ExPASy TrEMBL
Match: A0A5A7U299 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold264G00740 PE=4 SV=1) HSP 1 Score: 251 bits (640), Expect = 1.22e-83 Identity = 128/143 (89.51%), Postives = 138/143 (96.50%), Query Frame = 0
BLAST of CsGy3G027480 vs. ExPASy TrEMBL
Match: A0A1S3CFF4 (uncharacterized protein LOC103500315 OS=Cucumis melo OX=3656 GN=LOC103500315 PE=4 SV=1) HSP 1 Score: 251 bits (640), Expect = 1.22e-83 Identity = 128/143 (89.51%), Postives = 138/143 (96.50%), Query Frame = 0
BLAST of CsGy3G027480 vs. ExPASy TrEMBL
Match: A0A6J1GBV3 (uncharacterized protein LOC111452747 OS=Cucurbita moschata OX=3662 GN=LOC111452747 PE=4 SV=1) HSP 1 Score: 227 bits (579), Expect = 2.35e-74 Identity = 116/138 (84.06%), Postives = 128/138 (92.75%), Query Frame = 0
BLAST of CsGy3G027480 vs. ExPASy TrEMBL
Match: A0A6J1KAC7 (uncharacterized protein LOC111493115 OS=Cucurbita maxima OX=3661 GN=LOC111493115 PE=4 SV=1) HSP 1 Score: 225 bits (573), Expect = 1.81e-73 Identity = 115/138 (83.33%), Postives = 128/138 (92.75%), Query Frame = 0
BLAST of CsGy3G027480 vs. TAIR 10
Match: AT1G07985.1 (Expressed protein ) HSP 1 Score: 102.1 bits (253), Expect = 3.9e-22 Identity = 67/134 (50.00%), Postives = 92/134 (68.66%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (Gy14) v2.1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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