CsGy3G027175 (gene) Cucumber (Gy14) v2.1

Overview


Name	CsGy3G027175
Type	gene
Organism	Cucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
Description	60S ribosomal protein L44
Location	Gy14Chr3: 28291702 .. 28292782 (-)
RNA-Seq Expression	CsGy3G027175
Synteny	CsGy3G027175

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AAAATAAATTGGGTAAAGGGTCTTTCATTTATTTATTTAAAAAATAAAAATATTATTTTTTTGGATTCTGGGTTATTCACTCAAATTCCATTTAAAACTCGCTTCAACGCTTCTTCTTCCTCCAAATGCCGTTCTCATTCTCCTCTGCTTCATTTTTGCTCCTCCATGGCGGATTCTTCAGAAAATATACCTCCCTCCAAATCCCCACTCCATTTCCTCTTCAGTTGCTTCCGATCTTCCTCCAAACTTCCTACGAAAAAGGCTTCTTCGATCGCCCCACGCATCCGCCGGACTTCGTCGCGTACTTTCCGATTCAAGAAATCCTCTGCAACTGTTCCGGTCGACGTCGCCGATCCATCTCATGATGAGCTCTCTTTTTCGCCGGAGTTCAAGAAATCGCCTCCACTGTCGTTCATTATGCCGAAAGCGCCACAGGTCGGAGGTGAGATCGTTGTGGATTCGTCACTAAAGCCGAGTCAAACTCGGAAGAAGCCCCAGTCAAATTTCACGACGAAGAAACTCTCGCCGACGAGAAAAACAGCCGCGTTGTTGCACTCCGTATCTCTTCCTTCTCAGCAATTGACCCGCCAGAAATATTTTAAAAAACCAGTCTCTGGTCATCTCCCTGCCGCCGTCGCAACCACCTCCCCGGCGTTTTCAGACGGTAATAAACCGACCCCGAAGTTGCCTACGTATTATCCGGTCAAGAATTTCGATCGGGTGATTATGGTTGTTATTGTGGCGATTGTGATGCTGTGGGGACGACTATGCGCCATACTCTGCACAACAGCGCTGTTCTACTTGGGACGTCGAATGAGATCGGAAATCGAACCGGACGGCGGCGGCAGCGGCAGAGGTAGGCTTAGCGGGAATTCTTGAGAGGATTAGGCGAAAATACGTTGGTGAATTGAACACGGTTACGGAAAACCGCCATGCGAGAGAAGGTTGGAGAAGAGGTTTTCTTTGAATGACGGAAGAGAGATGGTGTTATTTTTGTAAATTTAATGGTCAGTGGTGTTTAAACTCTGTAAAAAACTAATAATTTGACTAATTCATAAACATATAAAGGAAAATTTGCACT

mRNA sequence

AAAATAAATTGGGTAAAGGGTCTTTCATTTATTTATTTAAAAAATAAAAATATTATTTTTTTGGATTCTGGGTTATTCACTCAAATTCCATTTAAAACTCGCTTCAACGCTTCTTCTTCCTCCAAATGCCGTTCTCATTCTCCTCTGCTTCATTTTTGCTCCTCCATGGCGGATTCTTCAGAAAATATACCTCCCTCCAAATCCCCACTCCATTTCCTCTTCAGTTGCTTCCGATCTTCCTCCAAACTTCCTACGAAAAAGGCTTCTTCGATCGCCCCACGCATCCGCCGGACTTCGTCGCGTACTTTCCGATTCAAGAAATCCTCTGCAACTGTTCCGGTCGACGTCGCCGATCCATCTCATGATGAGCTCTCTTTTTCGCCGGAGTTCAAGAAATCGCCTCCACTGTCGTTCATTATGCCGAAAGCGCCACAGGTCGGAGGTGAGATCGTTGTGGATTCGTCACTAAAGCCGAGTCAAACTCGGAAGAAGCCCCAGTCAAATTTCACGACGAAGAAACTCTCGCCGACGAGAAAAACAGCCGCGTTGTTGCACTCCGTATCTCTTCCTTCTCAGCAATTGACCCGCCAGAAATATTTTAAAAAACCAGTCTCTGGTCATCTCCCTGCCGCCGTCGCAACCACCTCCCCGGCGTTTTCAGACGGTAATAAACCGACCCCGAAGTTGCCTACGTATTATCCGGTCAAGAATTTCGATCGGGTGATTATGGTTGTTATTGTGGCGATTGTGATGCTGTGGGGACGACTATGCGCCATACTCTGCACAACAGCGCTGTTCTACTTGGGACGTCGAATGAGATCGGAAATCGAACCGGACGGCGGCGGCAGCGGCAGAGGTAGGCTTAGCGGGAATTCTTGAGAGGATTAGGCGAAAATACGTTGGTGAATTGAACACGGTTACGGAAAACCGCCATGCGAGAGAAGGTTGGAGAAGAGGTTTTCTTTGAATGACGGAAGAGAGATGGTGTTATTTTTGTAAATTTAATGGTCAGTGGTGTTTAAACTCTGTAAAAAACTAATAATTTGACTAATTCATAAACATATAAAGGAAAATTTGCACT

Coding sequence (CDS)

ATGGCGGATTCTTCAGAAAATATACCTCCCTCCAAATCCCCACTCCATTTCCTCTTCAGTTGCTTCCGATCTTCCTCCAAACTTCCTACGAAAAAGGCTTCTTCGATCGCCCCACGCATCCGCCGGACTTCGTCGCGTACTTTCCGATTCAAGAAATCCTCTGCAACTGTTCCGGTCGACGTCGCCGATCCATCTCATGATGAGCTCTCTTTTTCGCCGGAGTTCAAGAAATCGCCTCCACTGTCGTTCATTATGCCGAAAGCGCCACAGGTCGGAGGTGAGATCGTTGTGGATTCGTCACTAAAGCCGAGTCAAACTCGGAAGAAGCCCCAGTCAAATTTCACGACGAAGAAACTCTCGCCGACGAGAAAAACAGCCGCGTTGTTGCACTCCGTATCTCTTCCTTCTCAGCAATTGACCCGCCAGAAATATTTTAAAAAACCAGTCTCTGGTCATCTCCCTGCCGCCGTCGCAACCACCTCCCCGGCGTTTTCAGACGGTAATAAACCGACCCCGAAGTTGCCTACGTATTATCCGGTCAAGAATTTCGATCGGGTGATTATGGTTGTTATTGTGGCGATTGTGATGCTGTGGGGACGACTATGCGCCATACTCTGCACAACAGCGCTGTTCTACTTGGGACGTCGAATGAGATCGGAAATCGAACCGGACGGCGGCGGCAGCGGCAGAGGTAGGCTTAGCGGGAATTCTTGA

Protein sequence

MADSSENIPPSKSPLHFLFSCFRSSSKLPTKKASSIAPRIRRTSSRTFRFKKSSATVPVDVADPSHDELSFSPEFKKSPPLSFIMPKAPQVGGEIVVDSSLKPSQTRKKPQSNFTTKKLSPTRKTAALLHSVSLPSQQLTRQKYFKKPVSGHLPAAVATTSPAFSDGNKPTPKLPTYYPVKNFDRVIMVVIVAIVMLWGRLCAILCTTALFYLGRRMRSEIEPDGGGSGRGRLSGNS*

Homology

[Close]

BLAST of CsGy3G027175 vs. NCBI nr
Match: KGN58547.1 (hypothetical protein Csa_002056 [Cucumis sativus])

HSP 1 Score: 446 bits (1148), Expect = 1.30e-157
Identity = 236/240 (98.33%), Postives = 236/240 (98.33%), Query Frame = 0


Query: 1   MADSSENIPPSKSPLHFLFSCFRSSSKLPTKKASSIAPRIRRTSSRTFRFKKSSATVPVD 60
           MADSSENIPPSKSPLHFLFSCFRSSSKLPTKKASSIAPRIRRTSSRTFRFKKSSATVPVD
Sbjct: 1   MADSSENIPPSKSPLHFLFSCFRSSSKLPTKKASSIAPRIRRTSSRTFRFKKSSATVPVD 60

Query: 61  VADPSHDELSFSPEFKKSPPLSFIMPKAPQVGGEIVVDSSLKPSQTRKKP---QSNFTTK 120
           VADPSHDELSF PEFKKSPPLSFIMPKAPQVGGEIVVDSSLKPSQTRKKP   QSNFTTK
Sbjct: 61  VADPSHDELSFLPEFKKSPPLSFIMPKAPQVGGEIVVDSSLKPSQTRKKPHSTQSNFTTK 120

Query: 121 KLSPTRKTAALLHSVSLPSQQLTRQKYFKKPVSGHLPAAVATTSPAFSDGNKPTPKLPTY 180
           KLSPTRKTAALLHSVSLPSQQLTRQKYFKKPVSGHLPAAVATTSPAFSDGNKPTPKLPTY
Sbjct: 121 KLSPTRKTAALLHSVSLPSQQLTRQKYFKKPVSGHLPAAVATTSPAFSDGNKPTPKLPTY 180

Query: 181 YPVKNFDRVIMVVIVAIVMLWGRLCAILCTTALFYLGRRMRSEIEPDGGGSGRGRLSGNS 237
           YPVKNFDRVIMVVIVAIVMLWGRLCAILCTTALFYLGRRMRSEIEPDGGGSGRGRLSGNS
Sbjct: 181 YPVKNFDRVIMVVIVAIVMLWGRLCAILCTTALFYLGRRMRSEIEPDGGGSGRGRLSGNS 240

[Close]

BLAST of CsGy3G027175 vs. NCBI nr
Match: KAA0052773.1 (60S ribosomal protein L44 [Cucumis melo var. makuwa] >TYK04183.1 60S ribosomal protein L44 [Cucumis melo var. makuwa])

HSP 1 Score: 352 bits (904), Expect = 2.07e-120
Identity = 199/243 (81.89%), Postives = 207/243 (85.19%), Query Frame = 0


Query: 1   MADSSENIPPSKSPLHFLFSCFRSSSKLPTKKASSIAPRIRRTSSRTFRFKKSSATVPVD 60
           MADSS+  PPSKSP  FLF+CFRSSSKLP KK SSIAPR RRT S TFRFKKSSATVPVD
Sbjct: 1   MADSSQKNPPSKSPFRFLFTCFRSSSKLPAKKPSSIAPRNRRTFSLTFRFKKSSATVPVD 60

Query: 61  VADPSHDELSFSPEFKKSPPLSFIMPKAPQVGGEIVVDS---SLKPSQTRKKP---QSNF 120
           VA PSHDELSFSP+FKK PPLS I PKAPQV GEIVVDS   SLKPSQTRKKP   QSNF
Sbjct: 61  VAYPSHDELSFSPDFKKPPPLSLITPKAPQVVGEIVVDSGYESLKPSQTRKKPESTQSNF 120

Query: 121 TTKKLSPTRKTAALLHSVSLPSQQLTRQKYFKKPVSGHLPAAVATTSPAFSDGNKPTPKL 180
           TTKKLSPTRK AA LHSVS PSQ LTRQK FK+ VS HLPAAVATTSPAFSDGNKPTPKL
Sbjct: 121 TTKKLSPTRKIAASLHSVSPPSQLLTRQKDFKRSVSEHLPAAVATTSPAFSDGNKPTPKL 180

Query: 181 PTYYPVKNFDRVIMVVIVAIVMLWGRLCAILCTTALFYLGRRMRSEIEPDGGGSGRGRLS 237
            T YPVKN DRVIMVV+VAI++LWGRLCAILCTTALFYLGRRMRSE+E  GGG GRG   
Sbjct: 181 ATNYPVKNLDRVIMVVMVAIMVLWGRLCAILCTTALFYLGRRMRSEMEV-GGGGGRGGFG 240

[Close]

BLAST of CsGy3G027175 vs. NCBI nr
Match: XP_022949237.1 (uncharacterized protein LOC111452650 [Cucurbita moschata])

HSP 1 Score: 202 bits (514), Expect = 5.02e-61
Identity = 129/235 (54.89%), Postives = 157/235 (66.81%), Query Frame = 0


Query: 1   MADSSENIPPSKSPLHFLFSCFRSSSKLPTKKASSIAPRIRRTSSRTFRFKKSSATVPVD 60
           MA++SE + PSK PLHFL  CF SS K+ TKK  +   R  R  S  FRFKKSSATVP+D
Sbjct: 1   MAEASEKMSPSKRPLHFLLRCFGSSPKVQTKKNPTTGRRDSRIPSPRFRFKKSSATVPID 60

Query: 61  VADPS-----HDELSFSPEFKKSPPLSFIMPKAPQVGGEIVVDSSLKPSQTRKKPQSNFT 120
           VA P       D+ SFSPEFKK PP   I  +AP V  +IV    +KPSQ  KK +S  +
Sbjct: 61  VAVPEITVPCDDKASFSPEFKKPPPSPLIKSRAPTVRTKIV--ELIKPSQPWKKTESTRS 120

Query: 121 TKKLSPTRKTAALLHSVSLPSQQLTRQKYFKKPVSGHLPAAVATTSPAFSDGNKPTPKLP 180
              L+P ++TAALLHS+SLPS++L RQK FKK VS HL +AV T +P  S+  KP  K P
Sbjct: 121 DF-LTPAKRTAALLHSISLPSRRLNRQKDFKKTVS-HL-SAVKTPTPTSSERRKPADKPP 180

Query: 181 TYYPVKNFDRVIMVVIVAIVMLWGRLCAILCTTALFYLGRRMRSEIEPDGGGSGR 230
              P K  D +I++V VAIV+LWG+LCAILCTTALFY  RR+RSE E +GGG  R
Sbjct: 181 MNSPAKILDLIIVIVAVAIVVLWGQLCAILCTTALFYFCRRLRSETELEGGGEMR 230

[Close]

BLAST of CsGy3G027175 vs. NCBI nr
Match: KAG6606901.1 (60S ribosomal protein L44, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 201 bits (510), Expect = 4.22e-59
Identity = 128/235 (54.47%), Postives = 155/235 (65.96%), Query Frame = 0


Query: 1   MADSSENIPPSKSPLHFLFSCFRSSSKLPTKKASSIAPRIRRTSSRTFRFKKSSATVPVD 60
           MA++SE + PSK PLHFL  CF SS K+ TKK  +      R  S  FRFKKSSATVP+D
Sbjct: 1   MAEASEKMSPSKRPLHFLLRCFGSSPKVQTKKNPTTGRWDSRIPSPRFRFKKSSATVPID 60

Query: 61  VADPS-----HDELSFSPEFKKSPPLSFIMPKAPQVGGEIVVDSSLKPSQTRKKPQSNFT 120
           VA P       D+ SFSPEFKK PP   I  +AP V  +IV    +KPSQT KK +S   
Sbjct: 61  VAVPEITVPCDDKASFSPEFKKPPPSPLIKSRAPTVRTKIV--ELIKPSQTWKKTESTRY 120

Query: 121 TKKLSPTRKTAALLHSVSLPSQQLTRQKYFKKPVSGHLPAAVATTSPAFSDGNKPTPKLP 180
              L+P ++TAALLHS+SLPS++L RQK  KK VS HL +AV T +P  S+  KP  K P
Sbjct: 121 DS-LTPAKRTAALLHSISLPSRRLNRQKDLKKTVS-HL-SAVKTPTPTSSERRKPADKAP 180

Query: 181 TYYPVKNFDRVIMVVIVAIVMLWGRLCAILCTTALFYLGRRMRSEIEPDGGGSGR 230
              P K  D +I++V VAIV+LWG+LCAILCTTALFY  RR+RSE E +GGG  R
Sbjct: 181 MNSPAKILDLIIVIVAVAIVVLWGQLCAILCTTALFYFCRRLRSETESEGGGEMR 230

[Close]

BLAST of CsGy3G027175 vs. NCBI nr
Match: XP_022982640.1 (uncharacterized protein LOC111481455 [Cucurbita maxima] >XP_022982641.1 uncharacterized protein LOC111481455 [Cucurbita maxima])

HSP 1 Score: 172 bits (437), Expect = 7.86e-50
Identity = 122/243 (50.21%), Postives = 146/243 (60.08%), Query Frame = 0


Query: 1   MADSSENIPPSKSPLHFLFSCFRSSSKLPTKKASSIAPRIRRTSSRTFRFKKSSATVPVD 60
           MA+SS+     K  LHFLF CFRSS  +  +KA  IA   RRT S  FRFKK SATVP+D
Sbjct: 1   MAESSD-----KPRLHFLFRCFRSSPNVQRQKAQQIASPNRRTPSLRFRFKKCSATVPLD 60

Query: 61  VADPSHDELSFSPEFKKSPPLSFIMPKAPQVGGEIVVDS---SLKPSQTRKKP---QSNF 120
            A P HDELSFSPEF   PP S        + GEI+VDS   ++K S+TRKK    QSN 
Sbjct: 61  AAVPCHDELSFSPEFNTPPPPS-------PIKGEIIVDSGCKTIKQSKTRKKSESTQSNP 120

Query: 121 TTKKLSPTRKTAALLHSVSLPSQQLTRQKYFKKPVSGHLPAAVATTSPAFSDGNKPTPKL 180
           T +KL P +KT+  LHS          +K  KK +S HLP AVA   P  S  +  + K 
Sbjct: 121 TVEKLPPAKKTSPSLHS----------EKGLKKSIS-HLPIAVADADPTTSLASSDSWKA 180

Query: 181 PTYYPVKNFDRVIMVVIVAIVMLWGRLCAILCTTALFYLGRRMRSEIEPD---GGGSGRG 234
           PT  P   FD V ++V VAIV+LWGRLCAILCT ALFYL R +RS+ E D    GG   G
Sbjct: 181 PTNSPTIKFDLVTVIVAVAIVVLWGRLCAILCTAALFYLRRCLRSKAELDVVVDGGGAFG 220

[Close]

BLAST of CsGy3G027175 vs. ExPASy TrEMBL
Match: A0A0A0LCZ2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G680630 PE=4 SV=1)

HSP 1 Score: 446 bits (1148), Expect = 6.27e-158
Identity = 236/240 (98.33%), Postives = 236/240 (98.33%), Query Frame = 0


Query: 1   MADSSENIPPSKSPLHFLFSCFRSSSKLPTKKASSIAPRIRRTSSRTFRFKKSSATVPVD 60
           MADSSENIPPSKSPLHFLFSCFRSSSKLPTKKASSIAPRIRRTSSRTFRFKKSSATVPVD
Sbjct: 1   MADSSENIPPSKSPLHFLFSCFRSSSKLPTKKASSIAPRIRRTSSRTFRFKKSSATVPVD 60

Query: 61  VADPSHDELSFSPEFKKSPPLSFIMPKAPQVGGEIVVDSSLKPSQTRKKP---QSNFTTK 120
           VADPSHDELSF PEFKKSPPLSFIMPKAPQVGGEIVVDSSLKPSQTRKKP   QSNFTTK
Sbjct: 61  VADPSHDELSFLPEFKKSPPLSFIMPKAPQVGGEIVVDSSLKPSQTRKKPHSTQSNFTTK 120

Query: 121 KLSPTRKTAALLHSVSLPSQQLTRQKYFKKPVSGHLPAAVATTSPAFSDGNKPTPKLPTY 180
           KLSPTRKTAALLHSVSLPSQQLTRQKYFKKPVSGHLPAAVATTSPAFSDGNKPTPKLPTY
Sbjct: 121 KLSPTRKTAALLHSVSLPSQQLTRQKYFKKPVSGHLPAAVATTSPAFSDGNKPTPKLPTY 180

Query: 181 YPVKNFDRVIMVVIVAIVMLWGRLCAILCTTALFYLGRRMRSEIEPDGGGSGRGRLSGNS 237
           YPVKNFDRVIMVVIVAIVMLWGRLCAILCTTALFYLGRRMRSEIEPDGGGSGRGRLSGNS
Sbjct: 181 YPVKNFDRVIMVVIVAIVMLWGRLCAILCTTALFYLGRRMRSEIEPDGGGSGRGRLSGNS 240

[Close]

BLAST of CsGy3G027175 vs. ExPASy TrEMBL
Match: A0A5A7UA28 (60S ribosomal protein L44 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1856G00090 PE=4 SV=1)

HSP 1 Score: 352 bits (904), Expect = 1.00e-120
Identity = 199/243 (81.89%), Postives = 207/243 (85.19%), Query Frame = 0


Query: 1   MADSSENIPPSKSPLHFLFSCFRSSSKLPTKKASSIAPRIRRTSSRTFRFKKSSATVPVD 60
           MADSS+  PPSKSP  FLF+CFRSSSKLP KK SSIAPR RRT S TFRFKKSSATVPVD
Sbjct: 1   MADSSQKNPPSKSPFRFLFTCFRSSSKLPAKKPSSIAPRNRRTFSLTFRFKKSSATVPVD 60

Query: 61  VADPSHDELSFSPEFKKSPPLSFIMPKAPQVGGEIVVDS---SLKPSQTRKKP---QSNF 120
           VA PSHDELSFSP+FKK PPLS I PKAPQV GEIVVDS   SLKPSQTRKKP   QSNF
Sbjct: 61  VAYPSHDELSFSPDFKKPPPLSLITPKAPQVVGEIVVDSGYESLKPSQTRKKPESTQSNF 120

Query: 121 TTKKLSPTRKTAALLHSVSLPSQQLTRQKYFKKPVSGHLPAAVATTSPAFSDGNKPTPKL 180
           TTKKLSPTRK AA LHSVS PSQ LTRQK FK+ VS HLPAAVATTSPAFSDGNKPTPKL
Sbjct: 121 TTKKLSPTRKIAASLHSVSPPSQLLTRQKDFKRSVSEHLPAAVATTSPAFSDGNKPTPKL 180

Query: 181 PTYYPVKNFDRVIMVVIVAIVMLWGRLCAILCTTALFYLGRRMRSEIEPDGGGSGRGRLS 237
            T YPVKN DRVIMVV+VAI++LWGRLCAILCTTALFYLGRRMRSE+E  GGG GRG   
Sbjct: 181 ATNYPVKNLDRVIMVVMVAIMVLWGRLCAILCTTALFYLGRRMRSEMEV-GGGGGRGGFG 240

[Close]

BLAST of CsGy3G027175 vs. ExPASy TrEMBL
Match: A0A6J1GBH7 (uncharacterized protein LOC111452650 OS=Cucurbita moschata OX=3662 GN=LOC111452650 PE=4 SV=1)

HSP 1 Score: 202 bits (514), Expect = 2.43e-61
Identity = 129/235 (54.89%), Postives = 157/235 (66.81%), Query Frame = 0


Query: 1   MADSSENIPPSKSPLHFLFSCFRSSSKLPTKKASSIAPRIRRTSSRTFRFKKSSATVPVD 60
           MA++SE + PSK PLHFL  CF SS K+ TKK  +   R  R  S  FRFKKSSATVP+D
Sbjct: 1   MAEASEKMSPSKRPLHFLLRCFGSSPKVQTKKNPTTGRRDSRIPSPRFRFKKSSATVPID 60

Query: 61  VADPS-----HDELSFSPEFKKSPPLSFIMPKAPQVGGEIVVDSSLKPSQTRKKPQSNFT 120
           VA P       D+ SFSPEFKK PP   I  +AP V  +IV    +KPSQ  KK +S  +
Sbjct: 61  VAVPEITVPCDDKASFSPEFKKPPPSPLIKSRAPTVRTKIV--ELIKPSQPWKKTESTRS 120

Query: 121 TKKLSPTRKTAALLHSVSLPSQQLTRQKYFKKPVSGHLPAAVATTSPAFSDGNKPTPKLP 180
              L+P ++TAALLHS+SLPS++L RQK FKK VS HL +AV T +P  S+  KP  K P
Sbjct: 121 DF-LTPAKRTAALLHSISLPSRRLNRQKDFKKTVS-HL-SAVKTPTPTSSERRKPADKPP 180

Query: 181 TYYPVKNFDRVIMVVIVAIVMLWGRLCAILCTTALFYLGRRMRSEIEPDGGGSGR 230
              P K  D +I++V VAIV+LWG+LCAILCTTALFY  RR+RSE E +GGG  R
Sbjct: 181 MNSPAKILDLIIVIVAVAIVVLWGQLCAILCTTALFYFCRRLRSETELEGGGEMR 230

[Close]

BLAST of CsGy3G027175 vs. ExPASy TrEMBL
Match: A0A6J1IZW6 (uncharacterized protein LOC111481455 OS=Cucurbita maxima OX=3661 GN=LOC111481455 PE=4 SV=1)

HSP 1 Score: 172 bits (437), Expect = 3.81e-50
Identity = 122/243 (50.21%), Postives = 146/243 (60.08%), Query Frame = 0


Query: 1   MADSSENIPPSKSPLHFLFSCFRSSSKLPTKKASSIAPRIRRTSSRTFRFKKSSATVPVD 60
           MA+SS+     K  LHFLF CFRSS  +  +KA  IA   RRT S  FRFKK SATVP+D
Sbjct: 1   MAESSD-----KPRLHFLFRCFRSSPNVQRQKAQQIASPNRRTPSLRFRFKKCSATVPLD 60

Query: 61  VADPSHDELSFSPEFKKSPPLSFIMPKAPQVGGEIVVDS---SLKPSQTRKKP---QSNF 120
            A P HDELSFSPEF   PP S        + GEI+VDS   ++K S+TRKK    QSN 
Sbjct: 61  AAVPCHDELSFSPEFNTPPPPS-------PIKGEIIVDSGCKTIKQSKTRKKSESTQSNP 120

Query: 121 TTKKLSPTRKTAALLHSVSLPSQQLTRQKYFKKPVSGHLPAAVATTSPAFSDGNKPTPKL 180
           T +KL P +KT+  LHS          +K  KK +S HLP AVA   P  S  +  + K 
Sbjct: 121 TVEKLPPAKKTSPSLHS----------EKGLKKSIS-HLPIAVADADPTTSLASSDSWKA 180

Query: 181 PTYYPVKNFDRVIMVVIVAIVMLWGRLCAILCTTALFYLGRRMRSEIEPD---GGGSGRG 234
           PT  P   FD V ++V VAIV+LWGRLCAILCT ALFYL R +RS+ E D    GG   G
Sbjct: 181 PTNSPTIKFDLVTVIVAVAIVVLWGRLCAILCTAALFYLRRCLRSKAELDVVVDGGGAFG 220

[Close]

BLAST of CsGy3G027175 vs. ExPASy TrEMBL
Match: A0A6J1F3C2 (uncharacterized protein LOC111441760 OS=Cucurbita moschata OX=3662 GN=LOC111441760 PE=4 SV=1)

HSP 1 Score: 167 bits (422), Expect = 7.33e-48
Identity = 125/249 (50.20%), Postives = 147/249 (59.04%), Query Frame = 0


Query: 1   MADSSENIPPSKSPLHFLFSCFRSSSKLPTKKASSIAPRIRRTSSRTFRFKKSSATVPVD 60
           MA+SS+     K  LHFLF CFRSS  +  +KA  IA   RRT S  FRFKKSSATVP+D
Sbjct: 1   MAESSD-----KPRLHFLFRCFRSSPNVQRQKAHPIASPNRRTPSLRFRFKKSSATVPLD 60

Query: 61  VADPSHDELSFSPEFKKSPPLSFIMPKAPQVGGEIVVDS---SLKPSQTRKK-------P 120
            A P HDELS SPEF   PP        P + GEI+VDS   ++KPS+TRKK       P
Sbjct: 61  AAVPCHDELSLSPEFNTPPP-------PPLIKGEIIVDSGCKTIKPSKTRKKSESTQSNP 120

Query: 121 QSNFTTKKLSPTRKTAALLHSVSLPSQQLTRQKYFKKPVSGHLPAAVA--TTSPAFSDGN 180
           +S  T    +  +KT+  LHS          +K  KK +S HLP A A  TTS   SD  
Sbjct: 121 KSESTQSNSTAEKKTSPSLHS----------EKGLKKSIS-HLPTAAAALTTSLPSSDRW 180

Query: 181 KPTPKLPTYYPVKNFDRVIMVVIVAIVMLWGRLCAILCTTALFYLGRRMRSEIEPD---G 234
           KP    PT  P K FD VI++V VAIV+LWGRLCAILCT ALFYL R +RS+ E D    
Sbjct: 181 KP----PTNSPNKKFDLVIVIVAVAIVVLWGRLCAILCTAALFYLRRCLRSKAELDVVIH 222

The following BLAST results are available for this feature:

BLAST of CsGy3G027175 vs.


Match Name	E-value	Identity	Description

BLAST of CsGy3G027175 vs. NCBI nr


Match Name	E-value	Identity	Description
KGN58547.1	1.30e-157	98.33	hypothetical protein Csa_002056 [Cucumis sativus]	[more]
KAA0052773.1	2.07e-120	81.89	60S ribosomal protein L44 [Cucumis melo var. makuwa] >TYK04183.1 60S ribosomal p...	[more]
XP_022949237.1	5.02e-61	54.89	uncharacterized protein LOC111452650 [Cucurbita moschata]	[more]
KAG6606901.1	4.22e-59	54.47	60S ribosomal protein L44, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_022982640.1	7.86e-50	50.21	uncharacterized protein LOC111481455 [Cucurbita maxima] >XP_022982641.1 uncharac...	[more]

BLAST of CsGy3G027175 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LCZ2	6.27e-158	98.33	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G680630 PE=4 SV=1	[more]
A0A5A7UA28	1.00e-120	81.89	60S ribosomal protein L44 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffo...	[more]
A0A6J1GBH7	2.43e-61	54.89	uncharacterized protein LOC111452650 OS=Cucurbita moschata OX=3662 GN=LOC1114526...	[more]
A0A6J1IZW6	3.81e-50	50.21	uncharacterized protein LOC111481455 OS=Cucurbita maxima OX=3661 GN=LOC111481455...	[more]
A0A6J1F3C2	7.33e-48	50.20	uncharacterized protein LOC111441760 OS=Cucurbita moschata OX=3662 GN=LOC1114417...	[more]

BLAST of CsGy3G027175 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Cucumber (Gy14) v2.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 100..120
None	No IPR available	PANTHER	PTHR34379:SF3	PROTEIN, PUTATIVE-RELATED	coord: 1..228
IPR040411	Uncharacterized protein At5g23160-like	PANTHER	PTHR34379	OS07G0553800 PROTEIN	coord: 1..228

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsGy3G027175.1	CsGy3G027175.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005840	ribosome