CsGy3G025000 (gene) Cucumber (Gy14) v2.1

Overview


Name	CsGy3G025000
Type	gene
Organism	Cucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
Description	F-box protein
Location	Gy14Chr3: 25402417 .. 25403466 (-)
RNA-Seq Expression	CsGy3G025000
Synteny	CsGy3G025000

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTGCTCGTCTCATACCTGATGACATAACAATCGAAATTCTCCAATACTTCTCTCTAAGATCACTCGCCATTGCGAATTCCGTCTCTAAGCTTTGGCAATCCTTCATTTTCACCAAATCTCTCCATCTCCACACTCCTCTTTCCCCTCCAATCTGCCATGGCTTTTTCTTCCAAAGCTCTCACATCCCCAAAAATGGCGCCCCCATTCACTTCTTCCCTTCATCTCCCACCTCTCTAACCAAAACCAATTTCCCCAATCTCCGTCTTCTCGCCTCCAGCAATGGCCTCCTCCTCTGTAGCAAACCGAACCAAAACCCCATCATTCATTACTCTGTTTTCAATCCCTCCACCACTCAACTCATTCCCATCCCCAAACCAAGTAATCTCATCTCCAGTGTCAAAATCGGCTTCCATTCACATGATTCTGTGTCTTTCACCATCCTTCGATTTGTAAACTTTGGGTTCAAACCAATGGAGATTTTCGCCTCAGAAACAGGGGAATGGCGGCGGTTGGATTTCTATTTGGATATGGATACTATGTTCTTTCCGTTTGAAGGACCATCGGCGGTGGTTTTGAACGGAGTTTTTTATTGGTTGGAGTTCAATTCGTTCATTTACGCTTTTGATTTGCTTAGGAATGAGTTTTATCAAGTGGGGTTTCCTTCTGAAGAAACAGAGTATGAGCGAAACGTGTTGTTACGATGCCTCGCAATTGCGGGCGGGAGGCTGGTGATGGCTTCGACGGACGGGAAGGTTGTGGAGATTAGGGTTCTTGAAGAGAGGGATTGTTTGTGGGGTTTGAAGTGTAGATTGAGAGTTGAAAGTGTTGTTGGCATTAATGGAAACAGATTGTGTGAGGCGGCAGAGAGTGAGAGGTTAGTTGGGATTGTGGGGTTTCAGGGAAGAGATTCGGAAAGGATCTACATGAACACGACGGAGTTTGTGATTTGTTGCCATGTTGGGAGTGGAAAAGTTGAGATTGTTTATAGGTTTGATACCGTTTTGGAATCCAAGGATGTTTCCAGTTTTACCTTTTTCTCCTTATGA

mRNA sequence

ATGGCTGCTCGTCTCATACCTGATGACATAACAATCGAAATTCTCCAATACTTCTCTCTAAGATCACTCGCCATTGCGAATTCCGTCTCTAAGCTTTGGCAATCCTTCATTTTCACCAAATCTCTCCATCTCCACACTCCTCTTTCCCCTCCAATCTGCCATGGCTTTTTCTTCCAAAGCTCTCACATCCCCAAAAATGGCGCCCCCATTCACTTCTTCCCTTCATCTCCCACCTCTCTAACCAAAACCAATTTCCCCAATCTCCGTCTTCTCGCCTCCAGCAATGGCCTCCTCCTCTGTAGCAAACCGAACCAAAACCCCATCATTCATTACTCTGTTTTCAATCCCTCCACCACTCAACTCATTCCCATCCCCAAACCAAGTAATCTCATCTCCAGTGTCAAAATCGGCTTCCATTCACATGATTCTGTGTCTTTCACCATCCTTCGATTTGTAAACTTTGGGTTCAAACCAATGGAGATTTTCGCCTCAGAAACAGGGGAATGGCGGCGGTTGGATTTCTATTTGGATATGGATACTATGTTCTTTCCGTTTGAAGGACCATCGGCGGTGGTTTTGAACGGAGTTTTTTATTGGTTGGAGTTCAATTCGTTCATTTACGCTTTTGATTTGCTTAGGAATGAGTTTTATCAAGTGGGGTTTCCTTCTGAAGAAACAGAGTATGAGCGAAACGTGTTGTTACGATGCCTCGCAATTGCGGGCGGGAGGCTGGTGATGGCTTCGACGGACGGGAAGGTTGTGGAGATTAGGGTTCTTGAAGAGAGGGATTGTTTGTGGGGTTTGAAGTGTAGATTGAGAGTTGAAAGTGTTGTTGGCATTAATGGAAACAGATTGTGTGAGGCGGCAGAGAGTGAGAGGTTAGTTGGGATTGTGGGGTTTCAGGGAAGAGATTCGGAAAGGATCTACATGAACACGACGGAGTTTGTGATTTGTTGCCATGTTGGGAGTGGAAAAGTTGAGATTGTTTATAGGTTTGATACCGTTTTGGAATCCAAGGATGTTTCCAGTTTTACCTTTTTCTCCTTATGA

Coding sequence (CDS)

ATGGCTGCTCGTCTCATACCTGATGACATAACAATCGAAATTCTCCAATACTTCTCTCTAAGATCACTCGCCATTGCGAATTCCGTCTCTAAGCTTTGGCAATCCTTCATTTTCACCAAATCTCTCCATCTCCACACTCCTCTTTCCCCTCCAATCTGCCATGGCTTTTTCTTCCAAAGCTCTCACATCCCCAAAAATGGCGCCCCCATTCACTTCTTCCCTTCATCTCCCACCTCTCTAACCAAAACCAATTTCCCCAATCTCCGTCTTCTCGCCTCCAGCAATGGCCTCCTCCTCTGTAGCAAACCGAACCAAAACCCCATCATTCATTACTCTGTTTTCAATCCCTCCACCACTCAACTCATTCCCATCCCCAAACCAAGTAATCTCATCTCCAGTGTCAAAATCGGCTTCCATTCACATGATTCTGTGTCTTTCACCATCCTTCGATTTGTAAACTTTGGGTTCAAACCAATGGAGATTTTCGCCTCAGAAACAGGGGAATGGCGGCGGTTGGATTTCTATTTGGATATGGATACTATGTTCTTTCCGTTTGAAGGACCATCGGCGGTGGTTTTGAACGGAGTTTTTTATTGGTTGGAGTTCAATTCGTTCATTTACGCTTTTGATTTGCTTAGGAATGAGTTTTATCAAGTGGGGTTTCCTTCTGAAGAAACAGAGTATGAGCGAAACGTGTTGTTACGATGCCTCGCAATTGCGGGCGGGAGGCTGGTGATGGCTTCGACGGACGGGAAGGTTGTGGAGATTAGGGTTCTTGAAGAGAGGGATTGTTTGTGGGGTTTGAAGTGTAGATTGAGAGTTGAAAGTGTTGTTGGCATTAATGGAAACAGATTGTGTGAGGCGGCAGAGAGTGAGAGGTTAGTTGGGATTGTGGGGTTTCAGGGAAGAGATTCGGAAAGGATCTACATGAACACGACGGAGTTTGTGATTTGTTGCCATGTTGGGAGTGGAAAAGTTGAGATTGTTTATAGGTTTGATACCGTTTTGGAATCCAAGGATGTTTCCAGTTTTACCTTTTTCTCCTTATGA

Protein sequence

MAARLIPDDITIEILQYFSLRSLAIANSVSKLWQSFIFTKSLHLHTPLSPPICHGFFFQSSHIPKNGAPIHFFPSSPTSLTKTNFPNLRLLASSNGLLLCSKPNQNPIIHYSVFNPSTTQLIPIPKPSNLISSVKIGFHSHDSVSFTILRFVNFGFKPMEIFASETGEWRRLDFYLDMDTMFFPFEGPSAVVLNGVFYWLEFNSFIYAFDLLRNEFYQVGFPSEETEYERNVLLRCLAIAGGRLVMASTDGKVVEIRVLEERDCLWGLKCRLRVESVVGINGNRLCEAAESERLVGIVGFQGRDSERIYMNTTEFVICCHVGSGKVEIVYRFDTVLESKDVSSFTFFSL*

Homology

[Close]

BLAST of CsGy3G025000 vs. NCBI nr
Match: KGN58298.1 (hypothetical protein Csa_017498 [Cucumis sativus])

HSP 1 Score: 705 bits (1819), Expect = 3.51e-256
Identity = 349/349 (100.00%), Postives = 349/349 (100.00%), Query Frame = 0


Query: 1   MAARLIPDDITIEILQYFSLRSLAIANSVSKLWQSFIFTKSLHLHTPLSPPICHGFFFQS 60
           MAARLIPDDITIEILQYFSLRSLAIANSVSKLWQSFIFTKSLHLHTPLSPPICHGFFFQS
Sbjct: 1   MAARLIPDDITIEILQYFSLRSLAIANSVSKLWQSFIFTKSLHLHTPLSPPICHGFFFQS 60

Query: 61  SHIPKNGAPIHFFPSSPTSLTKTNFPNLRLLASSNGLLLCSKPNQNPIIHYSVFNPSTTQ 120
           SHIPKNGAPIHFFPSSPTSLTKTNFPNLRLLASSNGLLLCSKPNQNPIIHYSVFNPSTTQ
Sbjct: 61  SHIPKNGAPIHFFPSSPTSLTKTNFPNLRLLASSNGLLLCSKPNQNPIIHYSVFNPSTTQ 120

Query: 121 LIPIPKPSNLISSVKIGFHSHDSVSFTILRFVNFGFKPMEIFASETGEWRRLDFYLDMDT 180
           LIPIPKPSNLISSVKIGFHSHDSVSFTILRFVNFGFKPMEIFASETGEWRRLDFYLDMDT
Sbjct: 121 LIPIPKPSNLISSVKIGFHSHDSVSFTILRFVNFGFKPMEIFASETGEWRRLDFYLDMDT 180

Query: 181 MFFPFEGPSAVVLNGVFYWLEFNSFIYAFDLLRNEFYQVGFPSEETEYERNVLLRCLAIA 240
           MFFPFEGPSAVVLNGVFYWLEFNSFIYAFDLLRNEFYQVGFPSEETEYERNVLLRCLAIA
Sbjct: 181 MFFPFEGPSAVVLNGVFYWLEFNSFIYAFDLLRNEFYQVGFPSEETEYERNVLLRCLAIA 240

Query: 241 GGRLVMASTDGKVVEIRVLEERDCLWGLKCRLRVESVVGINGNRLCEAAESERLVGIVGF 300
           GGRLVMASTDGKVVEIRVLEERDCLWGLKCRLRVESVVGINGNRLCEAAESERLVGIVGF
Sbjct: 241 GGRLVMASTDGKVVEIRVLEERDCLWGLKCRLRVESVVGINGNRLCEAAESERLVGIVGF 300

Query: 301 QGRDSERIYMNTTEFVICCHVGSGKVEIVYRFDTVLESKDVSSFTFFSL 349
           QGRDSERIYMNTTEFVICCHVGSGKVEIVYRFDTVLESKDVSSFTFFSL
Sbjct: 301 QGRDSERIYMNTTEFVICCHVGSGKVEIVYRFDTVLESKDVSSFTFFSL 349

[Close]

BLAST of CsGy3G025000 vs. NCBI nr
Match: KAA0037964.1 (F-box protein [Cucumis melo var. makuwa])

HSP 1 Score: 603 bits (1555), Expect = 7.51e-216
Identity = 306/346 (88.44%), Postives = 318/346 (91.91%), Query Frame = 0


Query: 3   ARLIPDDITIEILQYFSLRSLAIANSVSKLWQSFIFTKSLHLHTPLSPPICHGFFFQSSH 62
           +R IP DITIEILQ+FSLRSLAIANSVSKLWQSF+FTKSLHLHTP SPPI HGFFFQSSH
Sbjct: 18  SRFIPHDITIEILQHFSLRSLAIANSVSKLWQSFVFTKSLHLHTPPSPPIRHGFFFQSSH 77

Query: 63  IPKNGAPIHFFPSSPTSLTKTNFPNLRLLASSNGLLLCSKPNQNPIIHYSVFNPSTTQLI 122
           IPKNGAPIHFFPSSPTSLTKT FPNLRLLASSNGLLLCSKPNQNP IHYSVFNPSTTQLI
Sbjct: 78  IPKNGAPIHFFPSSPTSLTKTRFPNLRLLASSNGLLLCSKPNQNPTIHYSVFNPSTTQLI 137

Query: 123 PIPKPSNLISSVKIGFHSHDSVSFTILRFVNFGFKPMEIFASETGEWRRLDFYLDMDTMF 182
           PIPKPSNLISSVKIGFHSHDSVSFTILRFVNFGFKPMEIFASETGEWRRLD YLDMDT+F
Sbjct: 138 PIPKPSNLISSVKIGFHSHDSVSFTILRFVNFGFKPMEIFASETGEWRRLDLYLDMDTIF 197

Query: 183 FPFEGPSAVVLNGVFYWLEFNSFIYAFDLLRNEFYQVGFPSEETEYERNVLLRCLAIAGG 242
            PFEGPSAVVLNGVFYWLEFNSFIYAFDLLRNEFYQVGFP EETEY R+VLLRCLAIAG 
Sbjct: 198 LPFEGPSAVVLNGVFYWLEFNSFIYAFDLLRNEFYQVGFPYEETEYGRSVLLRCLAIAGR 257

Query: 243 RLVMASTDGKVVEIRVLEERDCLWGLKCRLRVESVV-GINGNRLCEAAESERLVGIVGFQ 302
           RL+MASTDG+VVEIRVLE+RDCLWGLKCRLRVE VV GIN N       S RLVGIVGF 
Sbjct: 258 RLMMASTDGEVVEIRVLEDRDCLWGLKCRLRVEDVVVGINEN-------SRRLVGIVGF- 317

Query: 303 GRDSERIYMNTTEFVICCHVGSGKVEIVYRFDTVLESKDVSSFTFF 347
             DSERIY+NTTEFVICC VGSGKVEIVYRFDT+LES  +S+FTFF
Sbjct: 318 --DSERIYLNTTEFVICCDVGSGKVEIVYRFDTILESTHLSNFTFF 353

[Close]

BLAST of CsGy3G025000 vs. NCBI nr
Match: XP_038888571.1 (putative F-box protein At1g32420 [Benincasa hispida])

HSP 1 Score: 550 bits (1418), Expect = 5.90e-195
Identity = 270/345 (78.26%), Postives = 303/345 (87.83%), Query Frame = 0


Query: 6   IPDDITIEILQYFSLRSLAIANSVSKLWQSFIFTKSLHLHTPLSPPICHGFFFQSSHIPK 65
           + DDITIEILQ+FSLRSLA+AN VSKLWQSFI TKSL LHTPLSPPI HGFFFQSSHIPK
Sbjct: 9   LTDDITIEILQHFSLRSLAVANCVSKLWQSFISTKSL-LHTPLSPPIRHGFFFQSSHIPK 68

Query: 66  NGAPIHFFPSSPTSLTKTNFPNLRLLASSNGLLLCSKPNQNPIIHYSVFNPSTTQLIPIP 125
           NG PIHFFPSSPTSL KT+FPNLRLLASSNGLLLC KPNQNPIIHYSVFNPST QLIPIP
Sbjct: 69  NGVPIHFFPSSPTSLNKTHFPNLRLLASSNGLLLCGKPNQNPIIHYSVFNPSTNQLIPIP 128

Query: 126 KPSNLISSVKIGFHSHDSVSFTILRFVNFGFKPMEIFASETGEWRRLDFYLDMDTMFFPF 185
           KP+NLI++VKIGFHSH+SV+FTILRFVNFG +PMEIF SETGEWRRL F L +D++F PF
Sbjct: 129 KPTNLIAAVKIGFHSHNSVAFTILRFVNFGIRPMEIFTSETGEWRRLCFDLVIDSLFLPF 188

Query: 186 EGPSAVVLNGVFYWLEFNSFIYAFDLLRNEFYQVGFPSEETEYERNVLLRCLAIAGGRLV 245
           EGPSA VLNGVFYWLEF+SFIYAFDLLRNEF+++ FP+EETEY RN L RCLA+ GGRL+
Sbjct: 189 EGPSAAVLNGVFYWLEFDSFIYAFDLLRNEFFEMEFPTEETEYRRNALSRCLAVTGGRLL 248

Query: 246 MASTDGKVVEIRVLEERDCLWGLKCRLRVESVVGINGNRLCE---AAESERLVGIVGFQG 305
           MASTDG+ VEIRVL++RDC WGLKCRL VE++VGIN N LC    AA+  + +GIVGFQG
Sbjct: 249 MASTDGEFVEIRVLQDRDCSWGLKCRLSVETLVGINANTLCATAAAADRRKFIGIVGFQG 308

Query: 306 RDSERIYMNTTEFVICCHVGSGKVEIVYRFDTVLESKDVSSFTFF 347
           RDSERIY+NTTE VICC + +GKVEIV+RFD  L   DVS+F FF
Sbjct: 309 RDSERIYLNTTEVVICCDIETGKVEIVHRFDASLGCTDVSNFRFF 352

[Close]

BLAST of CsGy3G025000 vs. NCBI nr
Match: XP_022931048.1 (F-box protein At1g52495-like [Cucurbita moschata])

HSP 1 Score: 449 bits (1156), Expect = 2.60e-154
Identity = 231/346 (66.76%), Postives = 271/346 (78.32%), Query Frame = 0


Query: 6   IPDDITIEILQYFSLRSLAIANSVSKLWQSFIFTKSLHLHTPLSPPICHGFFFQSSHIPK 65
           +P+DI IEIL++FSLRSLA AN VSKLWQ+ I T  L LH  +S P+ HGFFFQ S I K
Sbjct: 58  LPEDIIIEILRHFSLRSLAKANCVSKLWQTHISTIPLLLHAAISSPLHHGFFFQGSTISK 117

Query: 66  NGAPIHFFPSSPTSLTKTNFPNLRLLASSNGLLLCSKPNQNPIIHYSVFNPSTTQLIPIP 125
           NG PIHFFPSS  ++  T+F   +L+ASSNGLLLC K NQNPI++YSV+NP++ +LIPIP
Sbjct: 118 NGVPIHFFPSS-LNILNTHF--YKLIASSNGLLLCGKSNQNPIVNYSVWNPTSNRLIPIP 177

Query: 126 KPSNLISSVKIGFHSHDSVSFTILRFVNFGFKPMEIFASETGEWRRLDFYLDMDTMFFPF 185
           KP NL + VKIGFHSHDSVSFTILRF N G +PMEIF+SETGEWR L F L MD++F PF
Sbjct: 178 KPRNLFTGVKIGFHSHDSVSFTILRFGNLGLEPMEIFSSETGEWRHLAFNLAMDSLFLPF 237

Query: 186 EGPSAVVLNGVFYWLEFNSFIYAFDLLRNEFYQVGFPSEETEYERNVLLRCLAIAGGRLV 245
           EGPSAVVLNGVFYWLEF S IYAFDLL+NEF +VGFP EE EY R V  RCLA+AGG +V
Sbjct: 238 EGPSAVVLNGVFYWLEFRSMIYAFDLLKNEFLKVGFPFEEPEYRREVFSRCLAVAGGEVV 297

Query: 246 MASTDGKVVEIRVLEER-DCLWGLKCRLRVESVVGINGNRLCE----AAESERLVGIVGF 305
           MAST+G+V+EI +L+++   LWGLK RL VES+VGI  N LC     AA   R+VGIVGF
Sbjct: 298 MASTNGEVIEIWILQDKASSLWGLKSRLNVESLVGIIANTLCARAATAAVGRRIVGIVGF 357

Query: 306 QGRDSERIYMNTTEFVICCHVGSGKVEIVYRFDTVLESKDVSSFTF 346
           Q  DSERIY+NTTE V+CC +GSGKVEIV+RFD  L   DVS F F
Sbjct: 358 QAWDSERIYLNTTEVVVCCDIGSGKVEIVHRFDESLGCTDVSDFMF 400

[Close]

BLAST of CsGy3G025000 vs. NCBI nr
Match: KAG7036294.1 (hypothetical protein SDJN02_03097, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 449 bits (1156), Expect = 2.60e-154
Identity = 231/346 (66.76%), Postives = 271/346 (78.32%), Query Frame = 0


Query: 6   IPDDITIEILQYFSLRSLAIANSVSKLWQSFIFTKSLHLHTPLSPPICHGFFFQSSHIPK 65
           +P+DI IEIL++FSLRSLA AN VSKLWQ+ I T  L LH  +S P+ HGFFFQ S I K
Sbjct: 58  LPEDIIIEILRHFSLRSLAKANCVSKLWQTHISTIPLLLHAAISSPLHHGFFFQGSTISK 117

Query: 66  NGAPIHFFPSSPTSLTKTNFPNLRLLASSNGLLLCSKPNQNPIIHYSVFNPSTTQLIPIP 125
           NG PIHFFPSS  ++  T+F   +L+ASSNGLLLC K NQNPI++YSV+NP++ +LIPIP
Sbjct: 118 NGVPIHFFPSS-LNILNTHF--YKLIASSNGLLLCGKSNQNPIVNYSVWNPTSNRLIPIP 177

Query: 126 KPSNLISSVKIGFHSHDSVSFTILRFVNFGFKPMEIFASETGEWRRLDFYLDMDTMFFPF 185
           KP NL + VKIGFHSHDSVSFTILRF N G +PMEIF+SETGEWR L F L MD++F PF
Sbjct: 178 KPRNLFTGVKIGFHSHDSVSFTILRFGNLGLEPMEIFSSETGEWRHLAFNLAMDSLFLPF 237

Query: 186 EGPSAVVLNGVFYWLEFNSFIYAFDLLRNEFYQVGFPSEETEYERNVLLRCLAIAGGRLV 245
           EGPSAVVLNGVFYWLEF S IYAFDLL+NEF +VGFP EE EY R V  RCLA+AGG +V
Sbjct: 238 EGPSAVVLNGVFYWLEFRSMIYAFDLLKNEFLKVGFPFEEPEYRREVFSRCLAVAGGEVV 297

Query: 246 MASTDGKVVEIRVLEER-DCLWGLKCRLRVESVVGINGNRLCE----AAESERLVGIVGF 305
           MAST+G+V+EI +L+++   LWGLK RL VES+VGI  N LC     AA   R+VGIVGF
Sbjct: 298 MASTNGEVIEIWILQDKASSLWGLKSRLNVESLVGIIANTLCARAATAAVGRRIVGIVGF 357

Query: 306 QGRDSERIYMNTTEFVICCHVGSGKVEIVYRFDTVLESKDVSSFTF 346
           Q  DSERIY+NTTE V+CC +GSGKVEIV+RFD  L   DVS F F
Sbjct: 358 QAWDSERIYLNTTEVVVCCDIGSGKVEIVHRFDESLGCTDVSDFMF 400

[Close]

BLAST of CsGy3G025000 vs. ExPASy TrEMBL
Match: A0A0A0L8X4 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G609260 PE=4 SV=1)

HSP 1 Score: 705 bits (1819), Expect = 1.70e-256
Identity = 349/349 (100.00%), Postives = 349/349 (100.00%), Query Frame = 0


Query: 1   MAARLIPDDITIEILQYFSLRSLAIANSVSKLWQSFIFTKSLHLHTPLSPPICHGFFFQS 60
           MAARLIPDDITIEILQYFSLRSLAIANSVSKLWQSFIFTKSLHLHTPLSPPICHGFFFQS
Sbjct: 1   MAARLIPDDITIEILQYFSLRSLAIANSVSKLWQSFIFTKSLHLHTPLSPPICHGFFFQS 60

Query: 61  SHIPKNGAPIHFFPSSPTSLTKTNFPNLRLLASSNGLLLCSKPNQNPIIHYSVFNPSTTQ 120
           SHIPKNGAPIHFFPSSPTSLTKTNFPNLRLLASSNGLLLCSKPNQNPIIHYSVFNPSTTQ
Sbjct: 61  SHIPKNGAPIHFFPSSPTSLTKTNFPNLRLLASSNGLLLCSKPNQNPIIHYSVFNPSTTQ 120

Query: 121 LIPIPKPSNLISSVKIGFHSHDSVSFTILRFVNFGFKPMEIFASETGEWRRLDFYLDMDT 180
           LIPIPKPSNLISSVKIGFHSHDSVSFTILRFVNFGFKPMEIFASETGEWRRLDFYLDMDT
Sbjct: 121 LIPIPKPSNLISSVKIGFHSHDSVSFTILRFVNFGFKPMEIFASETGEWRRLDFYLDMDT 180

Query: 181 MFFPFEGPSAVVLNGVFYWLEFNSFIYAFDLLRNEFYQVGFPSEETEYERNVLLRCLAIA 240
           MFFPFEGPSAVVLNGVFYWLEFNSFIYAFDLLRNEFYQVGFPSEETEYERNVLLRCLAIA
Sbjct: 181 MFFPFEGPSAVVLNGVFYWLEFNSFIYAFDLLRNEFYQVGFPSEETEYERNVLLRCLAIA 240

Query: 241 GGRLVMASTDGKVVEIRVLEERDCLWGLKCRLRVESVVGINGNRLCEAAESERLVGIVGF 300
           GGRLVMASTDGKVVEIRVLEERDCLWGLKCRLRVESVVGINGNRLCEAAESERLVGIVGF
Sbjct: 241 GGRLVMASTDGKVVEIRVLEERDCLWGLKCRLRVESVVGINGNRLCEAAESERLVGIVGF 300

Query: 301 QGRDSERIYMNTTEFVICCHVGSGKVEIVYRFDTVLESKDVSSFTFFSL 349
           QGRDSERIYMNTTEFVICCHVGSGKVEIVYRFDTVLESKDVSSFTFFSL
Sbjct: 301 QGRDSERIYMNTTEFVICCHVGSGKVEIVYRFDTVLESKDVSSFTFFSL 349

[Close]

BLAST of CsGy3G025000 vs. ExPASy TrEMBL
Match: A0A5A7T3C1 (F-box protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold36G001460 PE=4 SV=1)

HSP 1 Score: 603 bits (1555), Expect = 3.64e-216
Identity = 306/346 (88.44%), Postives = 318/346 (91.91%), Query Frame = 0


Query: 3   ARLIPDDITIEILQYFSLRSLAIANSVSKLWQSFIFTKSLHLHTPLSPPICHGFFFQSSH 62
           +R IP DITIEILQ+FSLRSLAIANSVSKLWQSF+FTKSLHLHTP SPPI HGFFFQSSH
Sbjct: 18  SRFIPHDITIEILQHFSLRSLAIANSVSKLWQSFVFTKSLHLHTPPSPPIRHGFFFQSSH 77

Query: 63  IPKNGAPIHFFPSSPTSLTKTNFPNLRLLASSNGLLLCSKPNQNPIIHYSVFNPSTTQLI 122
           IPKNGAPIHFFPSSPTSLTKT FPNLRLLASSNGLLLCSKPNQNP IHYSVFNPSTTQLI
Sbjct: 78  IPKNGAPIHFFPSSPTSLTKTRFPNLRLLASSNGLLLCSKPNQNPTIHYSVFNPSTTQLI 137

Query: 123 PIPKPSNLISSVKIGFHSHDSVSFTILRFVNFGFKPMEIFASETGEWRRLDFYLDMDTMF 182
           PIPKPSNLISSVKIGFHSHDSVSFTILRFVNFGFKPMEIFASETGEWRRLD YLDMDT+F
Sbjct: 138 PIPKPSNLISSVKIGFHSHDSVSFTILRFVNFGFKPMEIFASETGEWRRLDLYLDMDTIF 197

Query: 183 FPFEGPSAVVLNGVFYWLEFNSFIYAFDLLRNEFYQVGFPSEETEYERNVLLRCLAIAGG 242
            PFEGPSAVVLNGVFYWLEFNSFIYAFDLLRNEFYQVGFP EETEY R+VLLRCLAIAG 
Sbjct: 198 LPFEGPSAVVLNGVFYWLEFNSFIYAFDLLRNEFYQVGFPYEETEYGRSVLLRCLAIAGR 257

Query: 243 RLVMASTDGKVVEIRVLEERDCLWGLKCRLRVESVV-GINGNRLCEAAESERLVGIVGFQ 302
           RL+MASTDG+VVEIRVLE+RDCLWGLKCRLRVE VV GIN N       S RLVGIVGF 
Sbjct: 258 RLMMASTDGEVVEIRVLEDRDCLWGLKCRLRVEDVVVGINEN-------SRRLVGIVGF- 317

Query: 303 GRDSERIYMNTTEFVICCHVGSGKVEIVYRFDTVLESKDVSSFTFF 347
             DSERIY+NTTEFVICC VGSGKVEIVYRFDT+LES  +S+FTFF
Sbjct: 318 --DSERIYLNTTEFVICCDVGSGKVEIVYRFDTILESTHLSNFTFF 353

[Close]

BLAST of CsGy3G025000 vs. ExPASy TrEMBL
Match: A0A6J1EX93 (F-box protein At1g52495-like OS=Cucurbita moschata OX=3662 GN=LOC111437357 PE=4 SV=1)

HSP 1 Score: 449 bits (1156), Expect = 1.26e-154
Identity = 231/346 (66.76%), Postives = 271/346 (78.32%), Query Frame = 0


Query: 6   IPDDITIEILQYFSLRSLAIANSVSKLWQSFIFTKSLHLHTPLSPPICHGFFFQSSHIPK 65
           +P+DI IEIL++FSLRSLA AN VSKLWQ+ I T  L LH  +S P+ HGFFFQ S I K
Sbjct: 58  LPEDIIIEILRHFSLRSLAKANCVSKLWQTHISTIPLLLHAAISSPLHHGFFFQGSTISK 117

Query: 66  NGAPIHFFPSSPTSLTKTNFPNLRLLASSNGLLLCSKPNQNPIIHYSVFNPSTTQLIPIP 125
           NG PIHFFPSS  ++  T+F   +L+ASSNGLLLC K NQNPI++YSV+NP++ +LIPIP
Sbjct: 118 NGVPIHFFPSS-LNILNTHF--YKLIASSNGLLLCGKSNQNPIVNYSVWNPTSNRLIPIP 177

Query: 126 KPSNLISSVKIGFHSHDSVSFTILRFVNFGFKPMEIFASETGEWRRLDFYLDMDTMFFPF 185
           KP NL + VKIGFHSHDSVSFTILRF N G +PMEIF+SETGEWR L F L MD++F PF
Sbjct: 178 KPRNLFTGVKIGFHSHDSVSFTILRFGNLGLEPMEIFSSETGEWRHLAFNLAMDSLFLPF 237

Query: 186 EGPSAVVLNGVFYWLEFNSFIYAFDLLRNEFYQVGFPSEETEYERNVLLRCLAIAGGRLV 245
           EGPSAVVLNGVFYWLEF S IYAFDLL+NEF +VGFP EE EY R V  RCLA+AGG +V
Sbjct: 238 EGPSAVVLNGVFYWLEFRSMIYAFDLLKNEFLKVGFPFEEPEYRREVFSRCLAVAGGEVV 297

Query: 246 MASTDGKVVEIRVLEER-DCLWGLKCRLRVESVVGINGNRLCE----AAESERLVGIVGF 305
           MAST+G+V+EI +L+++   LWGLK RL VES+VGI  N LC     AA   R+VGIVGF
Sbjct: 298 MASTNGEVIEIWILQDKASSLWGLKSRLNVESLVGIIANTLCARAATAAVGRRIVGIVGF 357

Query: 306 QGRDSERIYMNTTEFVICCHVGSGKVEIVYRFDTVLESKDVSSFTF 346
           Q  DSERIY+NTTE V+CC +GSGKVEIV+RFD  L   DVS F F
Sbjct: 358 QAWDSERIYLNTTEVVVCCDIGSGKVEIVHRFDESLGCTDVSDFMF 400

[Close]

BLAST of CsGy3G025000 vs. ExPASy TrEMBL
Match: A0A6J1KAH8 (F-box protein At1g52495-like OS=Cucurbita maxima OX=3661 GN=LOC111491595 PE=4 SV=1)

HSP 1 Score: 444 bits (1143), Expect = 1.19e-152
Identity = 228/346 (65.90%), Postives = 270/346 (78.03%), Query Frame = 0


Query: 6   IPDDITIEILQYFSLRSLAIANSVSKLWQSFIFTKSLHLHTPLSPPICHGFFFQSSHIPK 65
           +P+DI IEIL++FSLRSLA AN VSKLWQ+ I T  L LH  +S P+ HGFFFQ S I K
Sbjct: 58  LPEDIIIEILRHFSLRSLAKANCVSKLWQTHISTIPLLLHAAISSPLHHGFFFQGSTISK 117

Query: 66  NGAPIHFFPSSPTSLTKTNFPNLRLLASSNGLLLCSKPNQNPIIHYSVFNPSTTQLIPIP 125
           NG PIHFFPSS  ++  T+F   +L++SSNGLLLC K NQNPI++YSV+NP++ +LIPIP
Sbjct: 118 NGVPIHFFPSS-LNILNTHF--YKLISSSNGLLLCGKSNQNPIVNYSVWNPASNRLIPIP 177

Query: 126 KPSNLISSVKIGFHSHDSVSFTILRFVNFGFKPMEIFASETGEWRRLDFYLDMDTMFFPF 185
           KP NL + VKIGFHSHDSVSFTILRF N G +PMEIF+SETGEWR L F L +D++F PF
Sbjct: 178 KPRNLFTGVKIGFHSHDSVSFTILRFGNLGLEPMEIFSSETGEWRHLAFNLAIDSLFLPF 237

Query: 186 EGPSAVVLNGVFYWLEFNSFIYAFDLLRNEFYQVGFPSEETEYERNVLLRCLAIAGGRLV 245
           EGPSAVVLNGVFYWLEF S IYAFDLL+NEF +VGFP EE EY R V  RCLA+AGG +V
Sbjct: 238 EGPSAVVLNGVFYWLEFRSMIYAFDLLKNEFLKVGFPFEEPEYRREVFSRCLAVAGGEVV 297

Query: 246 MASTDGKVVEIRVLEER-DCLWGLKCRLRVESVVGINGNRLCE----AAESERLVGIVGF 305
           MAST+G+V+EI +L+++   LWGLK RL VES+VGI  N LC     AA   R+VGIVGF
Sbjct: 298 MASTNGEVIEIWILQDKASSLWGLKSRLNVESLVGIIANTLCARAATAAVGRRIVGIVGF 357

Query: 306 QGRDSERIYMNTTEFVICCHVGSGKVEIVYRFDTVLESKDVSSFTF 346
           Q  DSERIY+NTTE V+CC +GS KVEIV+RFD  L   DVS F F
Sbjct: 358 QAWDSERIYLNTTEVVVCCDIGSAKVEIVHRFDESLGCTDVSDFMF 400

[Close]

BLAST of CsGy3G025000 vs. ExPASy TrEMBL
Match: A0A7J7HWW6 (F-box domain-containing protein OS=Camellia sinensis OX=4442 GN=HYC85_003831 PE=4 SV=1)

HSP 1 Score: 127 bits (318), Expect = 1.23e-29
Identity = 113/361 (31.30%), Postives = 169/361 (46.81%), Query Frame = 0


Query: 8   DDITIEILQYFSLRSLAIANSVSKLWQSFIFTKSLH--LHTPLSPPICH--GFFFQSSHI 67
           +D  ++IL     +SL     VS+ W+ +I + S+H    +    P  H  GFFFQ    
Sbjct: 9   EDNVLDILHKLPAKSLVKFKCVSRGWREYISSPSVHDCCRSRRWKPTPHMMGFFFQEQES 68

Query: 68  PKNGAPIHFFPSSPTSLTKTNFPNLR---------LLASSNGLLLCSKPNQNPIIHYSVF 127
            +    I F  SS       N  +           L+ASSNG LLC++ N+N  + Y ++
Sbjct: 69  -RRRLQIRFLFSSTKKEKMDNDLDESVSFLGRTAILVASSNGFLLCNQ-NRNHQMRYYIY 128

Query: 128 NPSTTQLIPIPKPSNLISSVKIGFHSHD--------SVSFTILRF------VNF-GFKPM 187
           NP+T Q   +PKP     SV  GF  +D        S+ + ++RF      ++      +
Sbjct: 129 NPATKQWAALPKPPKCYRSVATGFVCNDNTCDPYKDSICYKVVRFGIPKCFIDIQSIVTI 188

Query: 188 EIFASETGEWRRLDFYLDMDTMFFPFEGPSAVVLNGVFYWLEFNSFIYAFDLLRNEFYQV 247
           E F+SETG W  ++   D+    FP   P AVV++ VFYWL+    I A D+++ + + +
Sbjct: 189 ECFSSETGAWMTVNLIPDVPLPLFPTNDP-AVVIDEVFYWLDIGPRIIACDMVQRQCWVM 248

Query: 248 GFPSEETEYERNVLLRCLAIAGGRLVMASTDGKVVEIRVLEE----RDCLWGLKCRLRVE 307
            FP E  E    V   CLA+  G L     D   +EI  LE     R   W +K R+RV 
Sbjct: 249 NFPGEPKE----VSSMCLAVLNGHLHYGIADDVSIEIWSLEGDFRCRLAQWHMKHRVRVV 308

Query: 308 SVVGINGNRLCEA---AESERLVGIVGFQGRDSERI-YMNTTEFVICCHVGSGKVEIVYR 332
           S+     NR  E     ++  +  +VGF   D  RI Y+N    VI  H+ +G VE+V+ 
Sbjct: 309 SLA----NRYPEIFGLVDNLIISAVVGFHPADEHRIVYLNLRGKVISYHINNGIVEVVHD 358

The following BLAST results are available for this feature:

BLAST of CsGy3G025000 vs.


Match Name	E-value	Identity	Description

BLAST of CsGy3G025000 vs. NCBI nr


Match Name	E-value	Identity	Description
KGN58298.1	3.51e-256	100.00	hypothetical protein Csa_017498 [Cucumis sativus]	[more]
KAA0037964.1	7.51e-216	88.44	F-box protein [Cucumis melo var. makuwa]	[more]
XP_038888571.1	5.90e-195	78.26	putative F-box protein At1g32420 [Benincasa hispida]	[more]
XP_022931048.1	2.60e-154	66.76	F-box protein At1g52495-like [Cucurbita moschata]	[more]
KAG7036294.1	2.60e-154	66.76	hypothetical protein SDJN02_03097, partial [Cucurbita argyrosperma subsp. argyro...	[more]

BLAST of CsGy3G025000 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L8X4	1.70e-256	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G609260 PE=4 SV=1	[more]
A0A5A7T3C1	3.64e-216	88.44	F-box protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold36G001460 ...	[more]
A0A6J1EX93	1.26e-154	66.76	F-box protein At1g52495-like OS=Cucurbita moschata OX=3662 GN=LOC111437357 PE=4 ...	[more]
A0A6J1KAH8	1.19e-152	65.90	F-box protein At1g52495-like OS=Cucurbita maxima OX=3661 GN=LOC111491595 PE=4 SV...	[more]
A0A7J7HWW6	1.23e-29	31.30	F-box domain-containing protein OS=Camellia sinensis OX=4442 GN=HYC85_003831 PE=...	[more]

BLAST of CsGy3G025000 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Cucumber (Gy14) v2.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR017451	F-box associated interaction domain	TIGRFAM	TIGR01640	TIGR01640	coord: 95..273 e-value: 8.3E-13 score: 46.1
None	No IPR available	PANTHER	PTHR35546:SF30	SUBFAMILY NOT NAMED	coord: 1..348
None	No IPR available	PANTHER	PTHR35546	F-BOX PROTEIN INTERACTION DOMAIN PROTEIN-RELATED	coord: 1..348
IPR036047	F-box-like domain superfamily	SUPERFAMILY	81383	F-box domain	coord: 5..51
IPR015915	Kelch-type beta propeller	SUPERFAMILY	117281	Kelch motif	coord: 157..225

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsGy3G025000.2	CsGy3G025000.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0005515	protein binding