CsGy3G023910 (gene) Cucumber (Gy14) v2.1

Overview


Name	CsGy3G023910
Type	gene
Organism	Cucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
Description	Unknown protein
Location	Gy14Chr3: 23917261 .. 23918687 (+)
RNA-Seq Expression	CsGy3G023910
Synteny	CsGy3G023910

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CAAGTTATTATATTCCTCATCCAAAAAGACACCTTGCAAATCCATATATATATCCATGGCATATAACGCTCTAATCCTCTCTACAACATCCCCACCATATTAAGTAGCTTTATACAGTCTCAAAAGAAGTTTGTGTAGAAGAAGAGAAATTGATCGATGGAGGCAAACAAAAGAAAACTTAGAGGCTTCATGAGAGGGAAATTGATGCCTTTCTACAAGCAATATAATGGAAGCAAAACAAAGCAAACTGGTTTGGTTGGCTATGTCTTCCATAGGGAGTGCTATAGTAGTGTTTCTCAACATAACATTGGTTTATTGGTGCAGGATGACCCCGGTCGGGACACGACGGCCACTCGTGACTCATTAAGTCAGTTTGATCGTTCATATGGAATCATAGCTGACGAAGGTGTCGATGTAAAGGCAGCAAATTATATTTCCTCCACGTTAGCAAGATTCAAAAGCTTGAATGAGTTACCTCATCCAATAGAATTGTCGTCGATTCCATTGCCCCACCAATAGATTTGATGACCTTGTCGAGCACTTCTCTATTATTTATCTTGGACTTTACTAGTTGATTATTATTCTAAGTAAAGAACCGATGCTCATGTGGTTGGATATAGTGTTTCTCTCACGTATATAGAAGGTTTGAATCCCCACCTTTTATATATTTATAATGAAAAAAAACTTGAATGCATCTTCTCATATATTTCTTATCTCTCCATATACAAAAATAAACGTACCAAATATTTATAAAAAAAGTTGTCTTTGTGGTGGAGAGATGGAAAGCATTTGAGGATGCAACTAACCCTTTTATAATTATAATTTTATCACAAAACTATTTTATGATTGCATAAGCTGCAATTTAATTTAAATAAACATTCCATCATCAATAATTGACTCTTTAAAATATATGTTAAGTTGGAACTTTGACAGTTGAATTTTAAATGTTGTGTATTTTATCTAATAGATTATCTTGTTAACTATCAATTTTTTCTACACATATCTCGATCATTTTTTAAGTTATTGTACTCTCAAGAATCTTTGAACTTTAAATGTGTTTAATATGTGCAAAACCTTAAACTTTAAATTTGTCTGATAGGGAGCTTTCGGTTTGATATGTAAGCTTCTAAAACTCACTACTACAAATTTAGCCTTCTTTGATGTGCAAAACATGTCAAAAAATATCTACCTTGATAGTCTTTGTGCATCAAGTAGCCAGACATCAAGAAAGTTCGACCATCAGAAAACTAGTTTTCTTGATGGTATTGGCCATCAAGAAATGAGACTTTGATGTTTTTTGTCCGTCAAGAAAAGTGAATAGTCCATCAAGAATTTTTTGGATTTGAATCCGGGACTTCTTGTCCACAGGTATATACAGGTGTCAGTTGAGTTAAGCTCATGTTGTCACTATGAATCTTAAAAACCCA

mRNA sequence

CAAGTTATTATATTCCTCATCCAAAAAGACACCTTGCAAATCCATATATATATCCATGGCATATAACGCTCTAATCCTCTCTACAACATCCCCACCATATTAAGTAGCTTTATACAGTCTCAAAAGAAGTTTGTGTAGAAGAAGAGAAATTGATCGATGGAGGCAAACAAAAGAAAACTTAGAGGCTTCATGAGAGGGAAATTGATGCCTTTCTACAAGCAATATAATGGAAGCAAAACAAAGCAAACTGGATGACCCCGGTCGGGACACGACGGCCACTCGTGACTCATTAAGTCAGTTTGATCGTTCATATGGAATCATAGCTGACGAAGGTGTCGATGTAAAGGCAGCAAATTATATTTCCTCCACGTTAGCAAGATTCAAAAGCTTGAATGAGTTACCTCATCCAATAGAATTGTCGTCGATTCCATTGCCCCACCAATAGATTTGATGACCTTGTCGAGCACTTCTCTATTATTTATCTTGGACTTTACTAGTTGATTATTATTCTAAGTAAAGAACCGATGCTCATGTGGTTGGATATAGTGTTTCTCTCACGTATATAGAAGGTTTGAATCCCCACCTTTTATATATTTATAATGAAAAAAAACTTGAATGCATCTTCTCATATATTTCTTATCTCTCCATATACAAAAATAAACGTACCAAATATTTATAAAAAAAGTTGTCTTTGTGGTGGAGAGATGGAAAGCATTTGAGGATGCAACTAACCCTTTTATAATTATAATTTTATCACAAAACTATTTTATGATTGCATAAGCTGCAATTTAATTTAAATAAACATTCCATCATCAATAATTGACTCTTTAAAATATATGTTAAGTTGGAACTTTGACAGTTGAATTTTAAATGTTGTGTATTTTATCTAATAGATTATCTTGTTAACTATCAATTTTTTCTACACATATCTCGATCATTTTTTAAGTTATTGTACTCTCAAGAATCTTTGAACTTTAAATGTGTTTAATATGTGCAAAACCTTAAACTTTAAATTTGTCTGATAGGGAGCTTTCGGTTTGATATGTAAGCTTCTAAAACTCACTACTACAAATTTAGCCTTCTTTGATGTGCAAAACATGTCAAAAAATATCTACCTTGATAGTCTTTGTGCATCAAGTAGCCAGACATCAAGAAAGTTCGACCATCAGAAAACTAGTTTTCTTGATGGTATTGGCCATCAAGAAATGAGACTTTGATGTTTTTTGTCCGTCAAGAAAAGTGAATAGTCCATCAAGAATTTTTTGGATTTGAATCCGGGACTTCTTGTCCACAGGTATATACAGGTGTCAGTTGAGTTAAGCTCATGTTGTCACTATGAATCTTAAAAACCCA

Coding sequence (CDS)

ATGGAAGCAAAACAAAGCAAACTGGATGACCCCGGTCGGGACACGACGGCCACTCGTGACTCATTAAGTCAGTTTGATCGTTCATATGGAATCATAGCTGACGAAGGTGTCGATGTAAAGGCAGCAAATTATATTTCCTCCACGTTAGCAAGATTCAAAAGCTTGAATGAGTTACCTCATCCAATAGAATTGTCGTCGATTCCATTGCCCCACCAATAG

Protein sequence

MEAKQSKLDDPGRDTTATRDSLSQFDRSYGIIADEGVDVKAANYISSTLARFKSLNELPHPIELSSIPLPHQ*

Homology

[Close]

BLAST of CsGy3G023910 vs. NCBI nr
Match: KAE8650773.1 (hypothetical protein Csa_017653 [Cucumis sativus])

HSP 1 Score: 134 bits (338), Expect = 3.66e-39
Identity = 67/71 (94.37%), Postives = 69/71 (97.18%), Query Frame = 0


Query: 2  EAKQSKLDDPGRDTTATRDSLSQFDRSYGIIADEGVDVKAANYISSTLARFKSLNELPHP 61
          + KQ+ LDDPGRDTTATRDSLSQFDRSYGIIADEGVDVKAANYISSTLARFKSLNELPHP
Sbjct: 27 KTKQTGLDDPGRDTTATRDSLSQFDRSYGIIADEGVDVKAANYISSTLARFKSLNELPHP 86

Query: 62 IELSSIPLPHQ 72
          IELSSIPLPHQ
Sbjct: 87 IELSSIPLPHQ 97

[Close]

BLAST of CsGy3G023910 vs. NCBI nr
Match: KAA0042928.1 (hypothetical protein E6C27_scaffold44G004520 [Cucumis melo var. makuwa] >TYK05327.1 hypothetical protein E5676_scaffold108G001540 [Cucumis melo var. makuwa])

HSP 1 Score: 115 bits (289), Expect = 2.32e-31
Identity = 57/64 (89.06%), Postives = 60/64 (93.75%), Query Frame = 0


Query: 9   DDPGRDTTATRDSLSQFDRSYGIIADEGVDVKAANYISSTLARFKSLNELPHPIELSSIP 68
           D+P RDTTATR SLSQ D SYGI+ADEGVDVKAANYISSTLARFKSLNELPHPIE+SSIP
Sbjct: 58  DNPSRDTTATRGSLSQSDHSYGIVADEGVDVKAANYISSTLARFKSLNELPHPIEMSSIP 117

Query: 69  LPHQ 72
           LPHQ
Sbjct: 118 LPHQ 121

[Close]

BLAST of CsGy3G023910 vs. NCBI nr
Match: KAG6588895.1 (hypothetical protein SDJN03_17460, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 89.4 bits (220), Expect = 4.13e-21
Identity = 46/61 (75.41%), Postives = 52/61 (85.25%), Query Frame = 0


Query: 9  DDPGRDTTATRDSLSQFDRSYGIIADEGVDVKAANYISSTLARFKSLNELPHPIELSSIP 68
          ++PG DT  TRDSL+QFD  YGI+ADEG+DVKAANYISSTLARFKSLNEL  PIE+ S P
Sbjct: 39 ENPGPDTAVTRDSLTQFDNLYGIVADEGIDVKAANYISSTLARFKSLNELT-PIEILSPP 98

[Close]

BLAST of CsGy3G023910 vs. NCBI nr
Match: XP_030450626.1 (uncharacterized protein LOC115672813 [Syzygium oleosum])

HSP 1 Score: 49.3 bits (116), Expect = 3.55e-05
Identity = 23/35 (65.71%), Postives = 27/35 (77.14%), Query Frame = 0


Query: 19  RDSLSQFDRSYGIIADEGVDVKAANYISSTLARFK 53
           RDSL QFD+ +G+  DE VD+KAANYISS   RFK
Sbjct: 76  RDSLGQFDKMFGMPGDESVDLKAANYISSVQERFK 110

[Close]

BLAST of CsGy3G023910 vs. NCBI nr
Match: XP_021648774.1 (uncharacterized protein LOC110641383 [Hevea brasiliensis])

HSP 1 Score: 49.3 bits (116), Expect = 3.75e-05
Identity = 22/37 (59.46%), Postives = 28/37 (75.68%), Query Frame = 0


Query: 17  ATRDSLSQFDRSYGIIADEGVDVKAANYISSTLARFK 53
           + RD L+QFD+ YG+  DE VD+KAA+YISS   RFK
Sbjct: 77  SNRDKLTQFDKVYGVPGDESVDIKAASYISSVQERFK 113

[Close]

BLAST of CsGy3G023910 vs. ExPASy TrEMBL
Match: A0A0A0LVE7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G097750 PE=4 SV=1)

HSP 1 Score: 129 bits (323), Expect = 6.83e-37
Identity = 64/64 (100.00%), Postives = 64/64 (100.00%), Query Frame = 0


Query: 9   DDPGRDTTATRDSLSQFDRSYGIIADEGVDVKAANYISSTLARFKSLNELPHPIELSSIP 68
           DDPGRDTTATRDSLSQFDRSYGIIADEGVDVKAANYISSTLARFKSLNELPHPIELSSIP
Sbjct: 57  DDPGRDTTATRDSLSQFDRSYGIIADEGVDVKAANYISSTLARFKSLNELPHPIELSSIP 116

Query: 69  LPHQ 72
           LPHQ
Sbjct: 117 LPHQ 120

[Close]

BLAST of CsGy3G023910 vs. ExPASy TrEMBL
Match: A0A5D3C0J6 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold108G001540 PE=4 SV=1)

HSP 1 Score: 115 bits (289), Expect = 1.12e-31
Identity = 57/64 (89.06%), Postives = 60/64 (93.75%), Query Frame = 0


Query: 9   DDPGRDTTATRDSLSQFDRSYGIIADEGVDVKAANYISSTLARFKSLNELPHPIELSSIP 68
           D+P RDTTATR SLSQ D SYGI+ADEGVDVKAANYISSTLARFKSLNELPHPIE+SSIP
Sbjct: 58  DNPSRDTTATRGSLSQSDHSYGIVADEGVDVKAANYISSTLARFKSLNELPHPIEMSSIP 117

Query: 69  LPHQ 72
           LPHQ
Sbjct: 118 LPHQ 121

[Close]

BLAST of CsGy3G023910 vs. ExPASy TrEMBL
Match: A0A067LN74 (Uncharacterized protein OS=Jatropha curcas OX=180498 GN=JCGZ_10105 PE=4 SV=1)

HSP 1 Score: 48.9 bits (115), Expect = 2.38e-05
Identity = 22/32 (68.75%), Postives = 25/32 (78.12%), Query Frame = 0


Query: 22  LSQFDRSYGIIADEGVDVKAANYISSTLARFK 53
           LSQFD+ YG+  DEGVD+KAA YISS   RFK
Sbjct: 78  LSQFDKLYGVAGDEGVDIKAATYISSVQERFK 109

[Close]

BLAST of CsGy3G023910 vs. ExPASy TrEMBL
Match: A0A6A6LUB7 (Uncharacterized protein OS=Hevea brasiliensis OX=3981 GN=GH714_001496 PE=4 SV=1)

HSP 1 Score: 49.3 bits (116), Expect = 3.06e-05
Identity = 22/37 (59.46%), Postives = 28/37 (75.68%), Query Frame = 0


Query: 17  ATRDSLSQFDRSYGIIADEGVDVKAANYISSTLARFK 53
           + RD L+QFD+ YG+  DE VD+KAA+YISS   RFK
Sbjct: 111 SNRDKLTQFDKVYGVPGDESVDIKAASYISSVQERFK 147

[Close]

BLAST of CsGy3G023910 vs. ExPASy TrEMBL
Match: A0A059APA4 (Uncharacterized protein OS=Eucalyptus grandis OX=71139 GN=EUGRSUZ_I01634 PE=4 SV=1)

HSP 1 Score: 47.8 bits (112), Expect = 6.77e-05
Identity = 22/35 (62.86%), Postives = 27/35 (77.14%), Query Frame = 0


Query: 19  RDSLSQFDRSYGIIADEGVDVKAANYISSTLARFK 53
           RDSL+QFD+ +G+  DE VD+KA NYISS   RFK
Sbjct: 76  RDSLAQFDKVFGMPVDESVDLKATNYISSVQERFK 110

The following BLAST results are available for this feature:

BLAST of CsGy3G023910 vs.


Match Name	E-value	Identity	Description

BLAST of CsGy3G023910 vs. NCBI nr


Match Name	E-value	Identity	Description
KAE8650773.1	3.66e-39	94.37	hypothetical protein Csa_017653 [Cucumis sativus]	[more]
KAA0042928.1	2.32e-31	89.06	hypothetical protein E6C27_scaffold44G004520 [Cucumis melo var. makuwa] >TYK0532...	[more]
KAG6588895.1	4.13e-21	75.41	hypothetical protein SDJN03_17460, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_030450626.1	3.55e-05	65.71	uncharacterized protein LOC115672813 [Syzygium oleosum]	[more]
XP_021648774.1	3.75e-05	59.46	uncharacterized protein LOC110641383 [Hevea brasiliensis]	[more]

BLAST of CsGy3G023910 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LVE7	6.83e-37	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G097750 PE=4 SV=1	[more]
A0A5D3C0J6	1.12e-31	89.06	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A067LN74	2.38e-05	68.75	Uncharacterized protein OS=Jatropha curcas OX=180498 GN=JCGZ_10105 PE=4 SV=1	[more]
A0A6A6LUB7	3.06e-05	59.46	Uncharacterized protein OS=Hevea brasiliensis OX=3981 GN=GH714_001496 PE=4 SV=1	[more]
A0A059APA4	6.77e-05	62.86	Uncharacterized protein OS=Eucalyptus grandis OX=71139 GN=EUGRSUZ_I01634 PE=4 SV...	[more]

BLAST of CsGy3G023910 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Cucumber (Gy14) v2.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..16
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..21

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsGy3G023910.1	CsGy3G023910.1	mRNA