CsGy3G022890 (gene) Cucumber (Gy14) v2.1
Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CACCCTTTCCCTTTCCTTTCCTTTCCTTGTCCATTTCCCTTATATATATATATATGTAACCCTTCCAATTCTCTACCATTATCTCTCAATTCTCAACCAAAATACAAATCCCTTGTCTTCTCTAGAAATACCTCCTCATTTTTCCCCCTTTTCTTCTTCTTCTCAACATTCGAAGAATATACCAAAAAAAAAGGGGAGAAAATGGATCAAAGTTTGGAAGTGATATCAAAGAAAATATGCAACATGGTACGCATAGCTTATTACATGCTAAGGAAAGGTATTTTCAAAAGCAAGCTTATGGTTGATCTCACAAATCTCATCTCTAAACGCCGCAAGCTCACAGGAAAAGCTCTAAAGAATCTCATGTTCCACCACCACGACGGCGTCTCTGGTCTTGCCTTCTCCCTTGCCCCTTTCCGCCGCAACCACAACCTCGATCTCGCCGCCGCTGCCAGTCACTACGAATTTAGCTGCACCAACACCCCTGCTTTTCCTAGTTTTCATTACACCTTCAACAAACGACGCCATTTCTTCGCATGTGCTCACGCGCCTAATACACTGGACGATGACGTGGCTGCCATGAACGCTTTCAAGGCTGTTTGGGAGGCTCTTAACAATAATAATGACGTGGCTGCTGAAGTGGCTTCCCCGGCATTACCTGGGTTTGGTCGGAGTCCGATGGTTGTTCGGCAGCTGAGAGTCACTGACTCCCCGTTTCCAGTGGCCGGAGGTGGCGATGAGGACTGCCATGTGGATAAAGCGGCAGAGGAATTTATAAATCGGTTTTACAAGGAATTGCGGTTGCAGAAGACAGCGGAGTAAAAAGGATTTTTTCAAAACAAAAAAAATCAATTGTCGACTGGCTGGCGGCCACCTTGCCTCCGATGGGTTGAAAATTGACGATGTTAAATTTTGTCTAATATTTGTGTTTTTTTCTTAAACAATATTAAGAACATGTAATATTTGTGTTAATATTATAATAAGAGAAATTTCCCTTAATTTTTAGTATAGTTTTTTTTATCTTTC CACCCTTTCCCTTTCCTTTCCTTTCCTTGTCCATTTCCCTTATATATATATATATGTAACCCTTCCAATTCTCTACCATTATCTCTCAATTCTCAACCAAAATACAAATCCCTTGTCTTCTCTAGAAATACCTCCTCATTTTTCCCCCTTTTCTTCTTCTTCTCAACATTCGAAGAATATACCAAAAAAAAAGGGGAGAAAATGGATCAAAGTTTGGAAGTGATATCAAAGAAAATATGCAACATGGTACGCATAGCTTATTACATGCTAAGGAAAGGTATTTTCAAAAGCAAGCTTATGGTTGATCTCACAAATCTCATCTCTAAACGCCGCAAGCTCACAGGAAAAGCTCTAAAGAATCTCATGTTCCACCACCACGACGGCGTCTCTGGTCTTGCCTTCTCCCTTGCCCCTTTCCGCCGCAACCACAACCTCGATCTCGCCGCCGCTGCCAGTCACTACGAATTTAGCTGCACCAACACCCCTGCTTTTCCTAGTTTTCATTACACCTTCAACAAACGACGCCATTTCTTCGCATGTGCTCACGCGCCTAATACACTGGACGATGACGTGGCTGCCATGAACGCTTTCAAGGCTGTTTGGGAGGCTCTTAACAATAATAATGACGTGGCTGCTGAAGTGGCTTCCCCGGCATTACCTGGGTTTGGTCGGAGTCCGATGGTTGTTCGGCAGCTGAGAGTCACTGACTCCCCGTTTCCAGTGGCCGGAGGTGGCGATGAGGACTGCCATGTGGATAAAGCGGCAGAGGAATTTATAAATCGGTTTTACAAGGAATTGCGGTTGCAGAAGACAGCGGAGTAAAAAGGATTTTTTCAAAACAAAAAAAATCAATTGTCGACTGGCTGGCGGCCACCTTGCCTCCGATGGGTTGAAAATTGACGATGTTAAATTTTGTCTAATATTTGTGTTTTTTTCTTAAACAATATTAAGAACATGTAATATTTGTGTTAATATTATAATAAGAGAAATTTCCCTTAATTTTTAGTATAGTTTTTTTTATCTTTC ATGGATCAAAGTTTGGAAGTGATATCAAAGAAAATATGCAACATGGTACGCATAGCTTATTACATGCTAAGGAAAGGTATTTTCAAAAGCAAGCTTATGGTTGATCTCACAAATCTCATCTCTAAACGCCGCAAGCTCACAGGAAAAGCTCTAAAGAATCTCATGTTCCACCACCACGACGGCGTCTCTGGTCTTGCCTTCTCCCTTGCCCCTTTCCGCCGCAACCACAACCTCGATCTCGCCGCCGCTGCCAGTCACTACGAATTTAGCTGCACCAACACCCCTGCTTTTCCTAGTTTTCATTACACCTTCAACAAACGACGCCATTTCTTCGCATGTGCTCACGCGCCTAATACACTGGACGATGACGTGGCTGCCATGAACGCTTTCAAGGCTGTTTGGGAGGCTCTTAACAATAATAATGACGTGGCTGCTGAAGTGGCTTCCCCGGCATTACCTGGGTTTGGTCGGAGTCCGATGGTTGTTCGGCAGCTGAGAGTCACTGACTCCCCGTTTCCAGTGGCCGGAGGTGGCGATGAGGACTGCCATGTGGATAAAGCGGCAGAGGAATTTATAAATCGGTTTTACAAGGAATTGCGGTTGCAGAAGACAGCGGAGTAA MDQSLEVISKKICNMVRIAYYMLRKGIFKSKLMVDLTNLISKRRKLTGKALKNLMFHHHDGVSGLAFSLAPFRRNHNLDLAAAASHYEFSCTNTPAFPSFHYTFNKRRHFFACAHAPNTLDDDVAAMNAFKAVWEALNNNNDVAAEVASPALPGFGRSPMVVRQLRVTDSPFPVAGGGDEDCHVDKAAEEFINRFYKELRLQKTAE* Homology
BLAST of CsGy3G022890 vs. NCBI nr
Match: XP_011651489.1 (uncharacterized protein LOC105434903 [Cucumis sativus] >KGN58047.1 hypothetical protein Csa_011780 [Cucumis sativus]) HSP 1 Score: 417 bits (1071), Expect = 5.91e-147 Identity = 206/206 (100.00%), Postives = 206/206 (100.00%), Query Frame = 0
BLAST of CsGy3G022890 vs. NCBI nr
Match: XP_016900382.1 (PREDICTED: uncharacterized protein LOC103490087 [Cucumis melo] >KAA0050813.1 Avr9/Cf-9 rapidly elicited protein [Cucumis melo var. makuwa] >TYK08532.1 Avr9/Cf-9 rapidly elicited protein [Cucumis melo var. makuwa]) HSP 1 Score: 389 bits (998), Expect = 8.58e-136 Identity = 197/208 (94.71%), Postives = 201/208 (96.63%), Query Frame = 0
BLAST of CsGy3G022890 vs. NCBI nr
Match: XP_038902794.1 (uncharacterized protein LOC120089410 [Benincasa hispida]) HSP 1 Score: 369 bits (947), Expect = 4.93e-128 Identity = 183/207 (88.41%), Postives = 194/207 (93.72%), Query Frame = 0
BLAST of CsGy3G022890 vs. NCBI nr
Match: XP_022955942.1 (uncharacterized protein LOC111457776 [Cucurbita moschata]) HSP 1 Score: 330 bits (847), Expect = 6.67e-113 Identity = 168/206 (81.55%), Postives = 182/206 (88.35%), Query Frame = 0
BLAST of CsGy3G022890 vs. NCBI nr
Match: KAG6581884.1 (hypothetical protein SDJN03_21886, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 330 bits (846), Expect = 9.80e-113 Identity = 165/206 (80.10%), Postives = 181/206 (87.86%), Query Frame = 0
BLAST of CsGy3G022890 vs. ExPASy TrEMBL
Match: A0A0A0LBN4 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G462680 PE=4 SV=1) HSP 1 Score: 417 bits (1071), Expect = 2.86e-147 Identity = 206/206 (100.00%), Postives = 206/206 (100.00%), Query Frame = 0
BLAST of CsGy3G022890 vs. ExPASy TrEMBL
Match: A0A5A7U4P4 (Avr9/Cf-9 rapidly elicited protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold323G00700 PE=4 SV=1) HSP 1 Score: 389 bits (998), Expect = 4.16e-136 Identity = 197/208 (94.71%), Postives = 201/208 (96.63%), Query Frame = 0
BLAST of CsGy3G022890 vs. ExPASy TrEMBL
Match: A0A1S4DWM0 (uncharacterized protein LOC103490087 OS=Cucumis melo OX=3656 GN=LOC103490087 PE=4 SV=1) HSP 1 Score: 389 bits (998), Expect = 4.16e-136 Identity = 197/208 (94.71%), Postives = 201/208 (96.63%), Query Frame = 0
BLAST of CsGy3G022890 vs. ExPASy TrEMBL
Match: A0A6J1GV04 (uncharacterized protein LOC111457776 OS=Cucurbita moschata OX=3662 GN=LOC111457776 PE=4 SV=1) HSP 1 Score: 330 bits (847), Expect = 3.23e-113 Identity = 168/206 (81.55%), Postives = 182/206 (88.35%), Query Frame = 0
BLAST of CsGy3G022890 vs. ExPASy TrEMBL
Match: A0A6J1IR97 (uncharacterized protein LOC111479283 OS=Cucurbita maxima OX=3661 GN=LOC111479283 PE=4 SV=1) HSP 1 Score: 322 bits (824), Expect = 1.10e-109 Identity = 164/207 (79.23%), Postives = 180/207 (86.96%), Query Frame = 0
BLAST of CsGy3G022890 vs. TAIR 10
Match: AT1G52140.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G16330.1); Has 114 Blast hits to 114 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 114; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 134.0 bits (336), Expect = 1.3e-31 Identity = 95/217 (43.78%), Postives = 123/217 (56.68%), Query Frame = 0
BLAST of CsGy3G022890 vs. TAIR 10
Match: AT3G16330.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G52140.1); Has 109 Blast hits to 109 proteins in 16 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 109; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 133.7 bits (335), Expect = 1.8e-31 Identity = 94/214 (43.93%), Postives = 111/214 (51.87%), Query Frame = 0
BLAST of CsGy3G022890 vs. TAIR 10
Match: AT4G29110.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to chitin; LOCATED IN: vacuole; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G52140.1); Has 109 Blast hits to 109 proteins in 16 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 109; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 92.8 bits (229), Expect = 3.4e-19 Identity = 74/203 (36.45%), Postives = 103/203 (50.74%), Query Frame = 0
BLAST of CsGy3G022890 vs. TAIR 10
Match: AT4G32860.1 (unknown protein; Has 46 Blast hits to 46 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 46; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 55.8 bits (133), Expect = 4.6e-08 Identity = 56/209 (26.79%), Postives = 90/209 (43.06%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (Gy14) v2.1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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