CsGy3G022715 (gene) Cucumber (Gy14) v2.1

Overview
NameCsGy3G022715
Typegene
OrganismCucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
DescriptionUnknown protein
LocationGy14Chr3: 21406958 .. 21408222 (-)
RNA-Seq ExpressionCsGy3G022715
SyntenyCsGy3G022715
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTTTGTATTTTAATACAAAAACTGTCCCAATTGATTTGCCATCTAACAAACTAAACAAATATTCCAACAAAAAGGAACGAGATGAGAATGTACCTACGCAATTCCAGCACCTTATCTCTTGTTGGGATCATCTAATCCGTCTTCTTCCTGCATCTTCCGCAAATCCTCTTAGGTTCTTTCCTCTCCTTTCTACACAAATTGATCACCCATGTTGTTCGCCAGAAAATGATGTAGATTCTTCGTATCTTGCCTGCATTGTCTTTGATTATAATATGATTGAAATTCACTTGTTGATTGGTTTTCAATTGTTAATTACTTTTGGTTTTGCTATTTAGTGATAATACGTTGTGAGATTTTTGTTCGTTTTTGGGTTTTTTGATGTGATTTTGTCCTACAGAATGAAGAGTATGCTACGTATGTCGTAACCTTGCGAGGGGAAATGTTACAGGTGGACCCAAAATGGAGGTAGGATTGATACGTGCAGTTTGAGTTGTGGTTTTGTGAGGATTTGACATTCGTTATATGAATTTTGTAATTAACTATGTCATTCGATTGATATTTATAACGGTGCGGTTGCTTTTTTTAGGTTGAGAATTTGGACTTAACGCCTCTTTCTATTCATGGTTAATTGATTTTATTTCTTCCTTTTTGTTGATTGAGATTGGTTGTAGAACTCGTTGATGCGTCTACGTTTTAATGTTGGCCTGTTTTTTATTTTTTCTCCCTCTCATTGGGAGCTCTCTTTTGTTTTTCTTTTGTTTTTCTTTTGTCTTTCTATGTTCTTAATAATCTTTTAACAGTTGAAGTTCTAATCAATGGATAATTATTTCTTTATTGTCTTGATATAGTTGATTTAAATCATCAATTGTGTTGACTGACATTGTCTTGATAATTATTTCTTTTCTTAATTGGTTTTATTTCTTCCTTCTTGTTGACTAAGAATCGTTATAGAACTCGTTGATGCATCTATGTTTTAATTTTGGCCTATTTTTGAATTTTTCTCCCTCTCATTGGAAGCTCTCTTTTGTTTTTCTTTTGTCTTGCTATGTTCTTAATACTCTTTTAACAGTTAAAGTTTCTAATCAATGGATAATTATTTCTTTATTGTCTTGATATAGTTGATTTGAATCATCAATCGTGATGGAAAATTTGAAGCTTGTTTCCTCAGTTTGCTTTTTCTTTGTGCGTATTTATTAGCTCGTTGAGCTTTGGGGACGCAGGAATCACCAGTACATTTATTCGATGAGAGTGGCCATCCATTGA

mRNA sequence

ATGTTTGAACGAGATGAGAATGTACCTACGCAATTCCAGCACCTTATCTCTTGTTGGGATCATCTAATCCGTCTTCTTCCTGCATCTTCCGCAAATCCTCTTAGGTTCTTTCCTCTCCTTTCTACACAAATTGATCACCCATGTTGTTCGCCAGAAAATGATGTAGATTCTTCGTATCTTGCCTGCATTAATGAAGAGTATGCTACGTATGTCGTAACCTTGCGAGGGGAAATGTTACAGGTGGACCCAAAATGGAGGAATCACCAGTACATTTATTCGATGAGAGTGGCCATCCATTGA

Coding sequence (CDS)

ATGTTTGAACGAGATGAGAATGTACCTACGCAATTCCAGCACCTTATCTCTTGTTGGGATCATCTAATCCGTCTTCTTCCTGCATCTTCCGCAAATCCTCTTAGGTTCTTTCCTCTCCTTTCTACACAAATTGATCACCCATGTTGTTCGCCAGAAAATGATGTAGATTCTTCGTATCTTGCCTGCATTAATGAAGAGTATGCTACGTATGTCGTAACCTTGCGAGGGGAAATGTTACAGGTGGACCCAAAATGGAGGAATCACCAGTACATTTATTCGATGAGAGTGGCCATCCATTGA

Protein sequence

MFERDENVPTQFQHLISCWDHLIRLLPASSANPLRFFPLLSTQIDHPCCSPENDVDSSYLACINEEYATYVVTLRGEMLQVDPKWRNHQYIYSMRVAIH*
Homology
[Close]
BLAST of CsGy3G022715 vs. NCBI nr
Match: KGN58026.1 (hypothetical protein Csa_009482 [Cucumis sativus])

HSP 1 Score: 163 bits (412), Expect = 4.39e-50
Identity = 76/86 (88.37%), Postives = 77/86 (89.53%), Query Frame = 0 

Query: 14 HLISCWDHLIRLLPASSANPLRFFPLLSTQIDHPCCSPENDVDSSYLACINEEYATYVVT 73
          HLISCWDHLIRLLPASS+NPLRFFPLLSTQIDHPCCSPEND         NEEYATYVVT
Sbjct: 12 HLISCWDHLIRLLPASSSNPLRFFPLLSTQIDHPCCSPEND---------NEEYATYVVT 71

Query: 74 LRGEMLQVDPKWRNHQYIYSMRVAIH 99
          LRGEMLQVDPKWRNHQYIYSMRVAIH
Sbjct: 72 LRGEMLQVDPKWRNHQYIYSMRVAIH 88

[Close]
BLAST of CsGy3G022715 vs. ExPASy TrEMBL
Match: A0A0A0LDA6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G442050 PE=4 SV=1)

HSP 1 Score: 163 bits (412), Expect = 2.13e-50
Identity = 76/86 (88.37%), Postives = 77/86 (89.53%), Query Frame = 0 

Query: 14 HLISCWDHLIRLLPASSANPLRFFPLLSTQIDHPCCSPENDVDSSYLACINEEYATYVVT 73
          HLISCWDHLIRLLPASS+NPLRFFPLLSTQIDHPCCSPEND         NEEYATYVVT
Sbjct: 12 HLISCWDHLIRLLPASSSNPLRFFPLLSTQIDHPCCSPEND---------NEEYATYVVT 71

Query: 74 LRGEMLQVDPKWRNHQYIYSMRVAIH 99
          LRGEMLQVDPKWRNHQYIYSMRVAIH
Sbjct: 72 LRGEMLQVDPKWRNHQYIYSMRVAIH 88

The following BLAST results are available for this feature:
BLAST of CsGy3G022715 vs.
Match NameE-valueIdentityDescription
BLAST of CsGy3G022715 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN58026.14.39e-5088.37hypothetical protein Csa_009482 [Cucumis sativus][more]
BLAST of CsGy3G022715 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LDA62.13e-5088.37Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G442050 PE=4 SV=1[more]
BLAST of CsGy3G022715 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsGy3G022715.1CsGy3G022715.1mRNA