CsGy3G016350 (gene) Cucumber (Gy14) v2.1

Overview


Name	CsGy3G016350
Type	gene
Organism	Cucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
Description	embryo-specific protein ATS3B-like
Location	Gy14Chr3: 12126963 .. 12128683 (+)
RNA-Seq Expression	CsGy3G016350
Synteny	CsGy3G016350

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CAGTGCTCGACTCGTTACCGCCATTACCTTATAAAAACCCACACATCATTCAATCCCCTCACCATCCTTTTCTTCTCCCTAACGCTTTGTTAAACATGGACACGCCTCCCTCGTTTTTGATGCTGCTCCTCCTCCTCTCTTTTCTCGCCGTCGTCTGCTCCGCCGTCGTCCCCACTCCGATCACTTTGGACCCAGACGTTCCTCCATCGTCCCTTCCGATCGACTACATCCAGGTCCGCTTTTCAACTTTCTTTGTATTCTCAACTGTCGCTTTTCTAAGTTTATCTTTCAACTTTTCTGTAATCTTCTTCTCTTTGTTTCTTTTGTGTTGCTTAGGAAGTCGGAAGCTGCTCTTACGAGGTCACCGTTGAAACAAGCTGTGCATCTCCTTCATCCATCACTAGCGAAATCGGTGTTCTGTTTGGAGATACTTATGGAAATCAGGTTTTCTTTCTTTTCTATTTCTTTCAGTTTTTTTTTTCGGAGTGATGAAATTTCCATTTCCGGCCGTTTTGGGATTGGAAATTATCCAGAATGTGAATTAGTATGGTTTTAATTTATGAACTCTAGGCTTATTTTATTTCCCCAGATATAATCAAGGTCATGCGTTCTGTTTCTAGTCTTATACCAGAATGATTTTCGCCCGAATACTGAACTTCAGATTATGATCATTTTTATTTTGTTTTGTTGATCAAGCTCTGAATCTAAATAGATTGATCTTATTCCGCGGGACTTCTGTTTTGTGTTTGATTGTATAATTTCACAAATTGATAATAGATAATCGAGAAGAAGTTGGGTACTGGAGACAAGGTGTTTGGTAGTTGTAAGACAGATAGCTTTGTTCTGAAGGATCGACCCTGCATTATCCAAATCAGTTATATGTATATCTATAAGGATGGGGCTGACGATTGGCTTCCCAACTCTGTTGAAATCTCAGGCTCTGGAATCAATCCCCTTCTGTTTATCTTCAAATCCTCCATCCCAACAAACACTTGGTTTGGCTTCGATTTGCGTCAATATACTTTCCCACCGCCGCCCTCCGTCTTCCCAGCCCCTCCTCCTCCTTCCCATCCCTTGGTACCACCGCCGGAGCCAATCTTTTCATCACCGCCTCCTCCACCAAAGCCAATTCTTCCTCCACCGCCACCACCTCCTCAGCCTACTCCTCCATCGTCCTCCAGCAAGATCTCAGGTCAGAAGTGGGGTATGGTGTCTGTAATTTTGGGATTGTTGACTGCTCTTTTATGATTCTGCAGCAGCTGTTCGGTTTGCGTAGTAGGTAGATTTTGTAGTGGTGGGTGGGTGATAATGTTTTGTTGAAGTTTCTTCCCCCCATTTCATCATGTTGTAGGGAGTTCTGTGTAAGCTTTCAAAGCTCTAGTGAAACCTTTGTCTTTTCAGTTGTATGGGACTGATGCAATTCTACAGCTACTGCTTGTTCTGTGGCTGTTGGTTGAGAATGTTGGCTCTATATGGATGGGGATGATACTTTATTTTACGTTTCATCCCATTTTCCTCCATGCCTAAAGGTCTATGTAAGCTTCCAAAAAGCTTTTATGTTTTCATCTTTTCAGTTGTATGGGATAATATGTTTCTTTCCATGAGAGTGGGCTCAGTTATCTCAGTATTTCCATCTCTATAATTGTCTAGTATTTTCTTTTCATTTTCATCTTTTAAAAGAACTGTGATGGGTATGATGGCGATATCAATTTTTTTTTTTT

mRNA sequence

CAGTGCTCGACTCGTTACCGCCATTACCTTATAAAAACCCACACATCATTCAATCCCCTCACCATCCTTTTCTTCTCCCTAACGCTTTGTTAAACATGGACACGCCTCCCTCGTTTTTGATGCTGCTCCTCCTCCTCTCTTTTCTCGCCGTCGTCTGCTCCGCCGTCGTCCCCACTCCGATCACTTTGGACCCAGACGTTCCTCCATCGTCCCTTCCGATCGACTACATCCAGGAAGTCGGAAGCTGCTCTTACGAGGTCACCGTTGAAACAAGCTGTGCATCTCCTTCATCCATCACTAGCGAAATCGGTGTTCTGTTTGGAGATACTTATGGAAATCAGATAATCGAGAAGAAGTTGGGTACTGGAGACAAGGTGTTTGGTAGTTGTAAGACAGATAGCTTTGTTCTGAAGGATCGACCCTGCATTATCCAAATCAGTTATATGTATATCTATAAGGATGGGGCTGACGATTGGCTTCCCAACTCTGTTGAAATCTCAGGCTCTGGAATCAATCCCCTTCTGTTTATCTTCAAATCCTCCATCCCAACAAACACTTGGTTTGGCTTCGATTTGCGTCAATATACTTTCCCACCGCCGCCCTCCGTCTTCCCAGCCCCTCCTCCTCCTTCCCATCCCTTGGTACCACCGCCGGAGCCAATCTTTTCATCACCGCCTCCTCCACCAAAGCCAATTCTTCCTCCACCGCCACCACCTCCTCAGCCTACTCCTCCATCGTCCTCCAGCAAGATCTCAGGTCAGAAGTGGGGTATGGTGTCTGTAATTTTGGGATTGTTGACTGCTCTTTTATGATTCTGCAGCAGCTGTTCGGTTTGCGTAGTAGGTAGATTTTGTAGTGGTGGGTGGGTGATAATGTTTTGTTGAAGTTTCTTCCCCCCATTTCATCATGTTGTAGGGAGTTCTGTGTAAGCTTTCAAAGCTCTAGTGAAACCTTTGTCTTTTCAGTTGTATGGGACTGATGCAATTCTACAGCTACTGCTTGTTCTGTGGCTGTTGGTTGAGAATGTTGGCTCTATATGGATGGGGATGATACTTTATTTTACGTTTCATCCCATTTTCCTCCATGCCTAAAGGTCTATGTAAGCTTCCAAAAAGCTTTTATGTTTTCATCTTTTCAGTTGTATGGGATAATATGTTTCTTTCCATGAGAGTGGGCTCAGTTATCTCAGTATTTCCATCTCTATAATTGTCTAGTATTTTCTTTTCATTTTCATCTTTTAAAAGAACTGTGATGGGTATGATGGCGATATCAATTTTTTTTTTTT

Coding sequence (CDS)

ATGGACACGCCTCCCTCGTTTTTGATGCTGCTCCTCCTCCTCTCTTTTCTCGCCGTCGTCTGCTCCGCCGTCGTCCCCACTCCGATCACTTTGGACCCAGACGTTCCTCCATCGTCCCTTCCGATCGACTACATCCAGGAAGTCGGAAGCTGCTCTTACGAGGTCACCGTTGAAACAAGCTGTGCATCTCCTTCATCCATCACTAGCGAAATCGGTGTTCTGTTTGGAGATACTTATGGAAATCAGATAATCGAGAAGAAGTTGGGTACTGGAGACAAGGTGTTTGGTAGTTGTAAGACAGATAGCTTTGTTCTGAAGGATCGACCCTGCATTATCCAAATCAGTTATATGTATATCTATAAGGATGGGGCTGACGATTGGCTTCCCAACTCTGTTGAAATCTCAGGCTCTGGAATCAATCCCCTTCTGTTTATCTTCAAATCCTCCATCCCAACAAACACTTGGTTTGGCTTCGATTTGCGTCAATATACTTTCCCACCGCCGCCCTCCGTCTTCCCAGCCCCTCCTCCTCCTTCCCATCCCTTGGTACCACCGCCGGAGCCAATCTTTTCATCACCGCCTCCTCCACCAAAGCCAATTCTTCCTCCACCGCCACCACCTCCTCAGCCTACTCCTCCATCGTCCTCCAGCAAGATCTCAGGTCAGAAGTGGGGTATGGTGTCTGTAATTTTGGGATTGTTGACTGCTCTTTTATGA

Protein sequence

MDTPPSFLMLLLLLSFLAVVCSAVVPTPITLDPDVPPSSLPIDYIQEVGSCSYEVTVETSCASPSSITSEIGVLFGDTYGNQIIEKKLGTGDKVFGSCKTDSFVLKDRPCIIQISYMYIYKDGADDWLPNSVEISGSGINPLLFIFKSSIPTNTWFGFDLRQYTFPPPPSVFPAPPPPSHPLVPPPEPIFSSPPPPPKPILPPPPPPPQPTPPSSSSKISGQKWGMVSVILGLLTALL*

Homology

[Close]

BLAST of CsGy3G016350 vs. ExPASy Swiss-Prot
Match: Q6NPM5 (Embryo-specific protein ATS3B OS=Arabidopsis thaliana OX=3702 GN=ATS3B PE=1 SV=1)

HSP 1 Score: 106.3 bits (264), Expect = 4.9e-22
Identity = 55/156 (35.26%), Postives = 90/156 (57.69%), Query Frame = 0


Query: 6   SFLMLLLLLSFLAVVCSAVVPTPITLDPDVPPSSLPIDYIQEVG-SCSYEVTVETSCASP 65
           S  +   L+SF+ ++ ++V  + + LDP     S  +  IQ++G +C+Y V + TSC+S 
Sbjct: 3   SVRLFFTLISFVFIISTSVYESKV-LDPPHVAESFNVSLIQKLGNTCAYTVIISTSCSST 62

Query: 66  SSITSEIGVLFGDTYGNQIIEKKL-GTGDKVFGSCKTDSFVLKDRPCIIQISYMYIYKDG 125
                +I V FGD YGNQI   +L     K F  C +D+F + + PC  QI Y+Y+Y+ G
Sbjct: 63  RYTRDQISVAFGDGYGNQIYAPRLDDPSTKTFEQCSSDTFQI-NGPCTYQICYVYLYRSG 122

Query: 126 ADDWLPNSVEISGSGINPLLFIFKSSIPTNTWFGFD 160
            D W+PN+V+I   G   + F + + +P + W+GF+
Sbjct: 123 PDGWIPNTVKIYSHGSKAVTFPYNTYVPESVWYGFN 156

[Close]

BLAST of CsGy3G016350 vs. ExPASy Swiss-Prot
Match: Q681K2 (Embryo-specific protein ATS3A OS=Arabidopsis thaliana OX=3702 GN=ATS3A PE=1 SV=1)

HSP 1 Score: 99.8 bits (247), Expect = 4.6e-20
Identity = 48/157 (30.57%), Postives = 84/157 (53.50%), Query Frame = 0


Query: 5   PSFLMLLLLLSFLAVVCSAVVPTPITLDPDVPPSSLPIDYIQEVGSCSYEVTVETSCASP 64
           P FL  L   +  +   S +   P+ +D  +P   L     +   +CSY V ++TSC+S 
Sbjct: 7   PLFLFALCSFTLFSSARSFITTKPLPIDSFIPKPKL-----ENAAACSYTVIIKTSCSSV 66

Query: 65  SSITSEIGVLFGDTYGNQIIEKKL-GTGDKVFGSCKTDSFVLKDRPCIIQISYMYIYKDG 124
           S    +I + FGD YGN++  K+L     + F  C +D++ +   PC+  + Y+Y+ + G
Sbjct: 67  SYTRDKISISFGDVYGNEVYVKRLDDPSSRTFEKCSSDTYKISG-PCMRDVCYLYLLRQG 126

Query: 125 ADDWLPNSVEISGSGINPLLFIFKSSIPTNTWFGFDL 161
           +D W P +V+I GS I  + F +   +P + W+GF++
Sbjct: 127 SDGWKPENVKIYGSSIRSVTFYYNLFLPNSVWYGFNV 157

[Close]

BLAST of CsGy3G016350 vs. ExPASy Swiss-Prot
Match: Q9LYP6 (Embryo-specific protein ATS3 OS=Arabidopsis thaliana OX=3702 GN=ATS3 PE=2 SV=1)

HSP 1 Score: 87.0 bits (214), Expect = 3.1e-16
Identity = 60/155 (38.71%), Postives = 82/155 (52.90%), Query Frame = 0


Query: 49  GSCSYEVTVETSCASPSSITSEIGVLFGDTYGNQIIEKKLG---TGDKVFGSCKTDSFVL 108
           G+C Y V V TSC SP S   +I ++FGD  GN++   KLG    G    G C T++F +
Sbjct: 32  GTCPYTVVVMTSCLSPESTRDQISIVFGDADGNKVYAPKLGGLVRGPGGLGKCSTNTFQV 91

Query: 109 KDRPCIIQISYMYIYKDGADDWLPNSVEISGSGINPLLFIFKSSIP-TNTWFGFDLRQYT 168
           + +     I  +YI ++G D W+P S+EI   G   + F F  S+P  NTW+G +    T
Sbjct: 92  RGQCLNDPICSLYINRNGPDGWVPESIEIYSEGSKSVKFDFSKSVPQLNTWYGHNNCNTT 151

Query: 169 FPPPPSVFPAPPPPSHPLVPPPEPIFSSPPPPPKP 200
             P     P  PPP  P   PPE   + PPPPP+P
Sbjct: 152 GRPSS---PDLPPPHFPPEFPPETPTTPPPPPPRP 183

[Close]

BLAST of CsGy3G016350 vs. NCBI nr
Match: XP_004148123.1 (embryo-specific protein ATS3B [Cucumis sativus] >KGN57303.1 hypothetical protein Csa_011323 [Cucumis sativus])

HSP 1 Score: 454 bits (1167), Expect = 1.59e-160
Identity = 238/238 (100.00%), Postives = 238/238 (100.00%), Query Frame = 0


Query: 1   MDTPPSFLMLLLLLSFLAVVCSAVVPTPITLDPDVPPSSLPIDYIQEVGSCSYEVTVETS 60
           MDTPPSFLMLLLLLSFLAVVCSAVVPTPITLDPDVPPSSLPIDYIQEVGSCSYEVTVETS
Sbjct: 1   MDTPPSFLMLLLLLSFLAVVCSAVVPTPITLDPDVPPSSLPIDYIQEVGSCSYEVTVETS 60

Query: 61  CASPSSITSEIGVLFGDTYGNQIIEKKLGTGDKVFGSCKTDSFVLKDRPCIIQISYMYIY 120
           CASPSSITSEIGVLFGDTYGNQIIEKKLGTGDKVFGSCKTDSFVLKDRPCIIQISYMYIY
Sbjct: 61  CASPSSITSEIGVLFGDTYGNQIIEKKLGTGDKVFGSCKTDSFVLKDRPCIIQISYMYIY 120

Query: 121 KDGADDWLPNSVEISGSGINPLLFIFKSSIPTNTWFGFDLRQYTFPPPPSVFPAPPPPSH 180
           KDGADDWLPNSVEISGSGINPLLFIFKSSIPTNTWFGFDLRQYTFPPPPSVFPAPPPPSH
Sbjct: 121 KDGADDWLPNSVEISGSGINPLLFIFKSSIPTNTWFGFDLRQYTFPPPPSVFPAPPPPSH 180

Query: 181 PLVPPPEPIFSSPPPPPKPILPPPPPPPQPTPPSSSSKISGQKWGMVSVILGLLTALL 238
           PLVPPPEPIFSSPPPPPKPILPPPPPPPQPTPPSSSSKISGQKWGMVSVILGLLTALL
Sbjct: 181 PLVPPPEPIFSSPPPPPKPILPPPPPPPQPTPPSSSSKISGQKWGMVSVILGLLTALL 238

[Close]

BLAST of CsGy3G016350 vs. NCBI nr
Match: XP_008439123.1 (PREDICTED: sulfated surface glycoprotein 185-like [Cucumis melo])

HSP 1 Score: 387 bits (993), Expect = 7.20e-134
Identity = 213/247 (86.23%), Postives = 220/247 (89.07%), Query Frame = 0


Query: 1   MDTPPS-FLMLLLLLSFLAVVCSAVVPTPITLDPDVPPSSLPIDYIQEVGSCSYEVTVET 60
           MDTPPS F +LLL LSFLAVVCSAV+P PITLDP+V PSSLPI YIQEVGSCSY VTV T
Sbjct: 1   MDTPPSPFFLLLLPLSFLAVVCSAVLPAPITLDPEVAPSSLPIHYIQEVGSCSYYVTVAT 60

Query: 61  SCASPSSITSEIGVLFGDTYGNQIIEKKLGTGDKVFGSCKTDSFVLKDRPCIIQISYMYI 120
           SCASPSSI SEIGVLFGDTYGNQIIEKKL  GDKVFGSCKTDSFVLKDRPCI+QISYMYI
Sbjct: 61  SCASPSSIASEIGVLFGDTYGNQIIEKKLSNGDKVFGSCKTDSFVLKDRPCIVQISYMYI 120

Query: 121 YKDGADDWLPNSVEISGSGINPLLFIFKSSIPTNTWFGFDLRQYTFPPPP-SVFPAPP-- 180
           YKDG DDWLPNSVEISGSGINPLLFIFKSSIPTNTWFGFDLRQYTFPPPP SVFPAPP  
Sbjct: 121 YKDGDDDWLPNSVEISGSGINPLLFIFKSSIPTNTWFGFDLRQYTFPPPPPSVFPAPPLP 180

Query: 181 -----PPSHPLVPPPEPIFSSPPPPPKPILPPPPPPPQPTPPSSSSKISGQKWGMVSVIL 238
                PP +P VPPPEP+F  PPPPPKP+LPPPPPP  PTPPSSSSKISGQK GMVSVIL
Sbjct: 181 WLSPPPPPYPTVPPPEPVFPPPPPPPKPVLPPPPPPAHPTPPSSSSKISGQKSGMVSVIL 240

[Close]

BLAST of CsGy3G016350 vs. NCBI nr
Match: KAA0033580.1 (sulfated surface glycoprotein 185-like [Cucumis melo var. makuwa])

HSP 1 Score: 384 bits (985), Expect = 1.19e-132
Identity = 212/247 (85.83%), Postives = 219/247 (88.66%), Query Frame = 0


Query: 1   MDTPPS-FLMLLLLLSFLAVVCSAVVPTPITLDPDVPPSSLPIDYIQEVGSCSYEVTVET 60
           MDTPPS F +LLL LSFLAVVCSAV+P PITLDP+V PSSLPI YIQEVGSCSY VTV T
Sbjct: 1   MDTPPSPFFLLLLPLSFLAVVCSAVLPAPITLDPEVAPSSLPIHYIQEVGSCSYYVTVAT 60

Query: 61  SCASPSSITSEIGVLFGDTYGNQIIEKKLGTGDKVFGSCKTDSFVLKDRPCIIQISYMYI 120
           SCASPSSI SEIGVLFGDTYGNQIIEKKL  GDKVFGSCKTDSFVLKDRPCI+QISYMYI
Sbjct: 61  SCASPSSIASEIGVLFGDTYGNQIIEKKLSNGDKVFGSCKTDSFVLKDRPCIVQISYMYI 120

Query: 121 YKDGADDWLPNSVEISGSGINPLLFIFKSSIPTNTWFGFDLRQYTFPPPP-SVFPAPP-- 180
           YKDG DDWLPNSVEISGSGINPLLFIFKSSIPTNTWFGFDLRQYTFPPPP SVFPAPP  
Sbjct: 121 YKDGDDDWLPNSVEISGSGINPLLFIFKSSIPTNTWFGFDLRQYTFPPPPPSVFPAPPLP 180

Query: 181 -----PPSHPLVPPPEPIFSSPPPPPKPILPPPPPPPQPTPPSSSSKISGQKWGMVSVIL 238
                PP +P VPPPEP+F  PPPP KP+LPPPPPP  PTPPSSSSKISGQK GMVSVIL
Sbjct: 181 WLSPPPPPYPTVPPPEPVFPPPPPPSKPVLPPPPPPAHPTPPSSSSKISGQKSGMVSVIL 240

[Close]

BLAST of CsGy3G016350 vs. NCBI nr
Match: XP_038877437.1 (embryo-specific protein ATS3B-like [Benincasa hispida])

HSP 1 Score: 331 bits (848), Expect = 7.68e-112
Identity = 186/248 (75.00%), Postives = 203/248 (81.85%), Query Frame = 0


Query: 1   MDTPPSFLMLLLLLSFLAVVCSAVVPTPITLDPDVPPSSLPIDYIQEVGSCSYEVTVETS 60
           M+  PS L+LLLLLSFLAV+CSAV P PIT+ PDV P S+PI+YIQ+VGSCSY+VTV TS
Sbjct: 1   MEKAPSPLLLLLLLSFLAVICSAVEPAPITVKPDVAPVSIPINYIQKVGSCSYDVTVVTS 60

Query: 61  CASPSSITSEIGVLFGDTYGNQIIEKKLGTGDKVFGSCKTDSFVLKDRPCIIQISYMYIY 120
           CAS SSIT EIG+LFGD++GNQIIEKKL   DKVF SC TDSFVLKDRPC +Q+SYMYIY
Sbjct: 61  CASSSSITGEIGILFGDSHGNQIIEKKLSNEDKVFDSCNTDSFVLKDRPCSVQMSYMYIY 120

Query: 121 KDGADDWLPNSVEISGSGINPLLFIFKSSIPTNTWFGFDLRQYTFPPPPSVFPAPP---- 180
           KDGADDWLPNSVEISGSGI PLLFIFKSSIP NTWFGFDLRQ+ FP PPS  PAPP    
Sbjct: 121 KDGADDWLPNSVEISGSGIKPLLFIFKSSIPRNTWFGFDLRQFPFPSPPSYDPAPPLPWL 180

Query: 181 ------PPSHPLVPPPEPIFSSPPPPPKPILPPPPPPPQPTPPSSSSKISGQKWGMVSVI 238
                 PPS PL+PPPEPI   PPPPP+P+LPP PP    TPPSSSSKISG  WGMVSVI
Sbjct: 181 FPPPSPPPSFPLLPPPEPILP-PPPPPEPVLPPVPPS---TPPSSSSKISGHAWGMVSVI 240

[Close]

BLAST of CsGy3G016350 vs. NCBI nr
Match: KAG6576773.1 (Embryo-specific protein ATS3B, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 320 bits (821), Expect = 1.05e-107
Identity = 187/247 (75.71%), Postives = 199/247 (80.57%), Query Frame = 0


Query: 2   DTPPSFLMLLLLLSFLAVVCSAVVPTPITLDPDVPPSSLPIDYIQEVGSCSYEVTVETSC 61
            +PP  L LLLLLS LAVVCSAV P  IT+ PDV P SLPI+YIQEVGSCSYEVTV TSC
Sbjct: 5   SSPP--LSLLLLLSALAVVCSAVEPPQITVKPDVAPESLPINYIQEVGSCSYEVTVATSC 64

Query: 62  ASPSSITSEIGVLFGDTYGNQIIEKKLGTGDKVFGSCKTDSFVLKDRPCIIQISYMYIYK 121
           +SPS IT EIGVLFGD++GNQI+EKKL  GDKVF SC TD FVL DRPC +QISYMYIYK
Sbjct: 65  SSPSFITDEIGVLFGDSHGNQIVEKKLSNGDKVFDSCNTDRFVLNDRPCSVQISYMYIYK 124

Query: 122 DGADDWLPNSVEISGSGINPLLFIFKSSIPTNTWFGFDLRQYTFPPPPSV-----FPA-- 181
           DGADDWLPNSVEISGSGI PLLFIFKSSIP+NTWFGFDLRQY F  PPS      FP+  
Sbjct: 125 DGADDWLPNSVEISGSGIKPLLFIFKSSIPSNTWFGFDLRQYPFLSPPSYNPYPPFPSLS 184

Query: 182 ---PPPPSHPLVPPPEPIFSSPPPPPKPILPPPPPPPQPTPPSSSSKISGQKWGMVSVIL 238
              PPPP HPL PPPEPIFS PPPPPKP+LPP PPPP P  PSSSSKISG K   VSV+L
Sbjct: 185 PPPPPPPPHPLPPPPEPIFS-PPPPPKPVLPPSPPPPPP--PSSSSKISGLKLAKVSVVL 244

[Close]

BLAST of CsGy3G016350 vs. ExPASy TrEMBL
Match: A0A0A0L699 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G177960 PE=4 SV=1)

HSP 1 Score: 454 bits (1167), Expect = 7.71e-161
Identity = 238/238 (100.00%), Postives = 238/238 (100.00%), Query Frame = 0


Query: 1   MDTPPSFLMLLLLLSFLAVVCSAVVPTPITLDPDVPPSSLPIDYIQEVGSCSYEVTVETS 60
           MDTPPSFLMLLLLLSFLAVVCSAVVPTPITLDPDVPPSSLPIDYIQEVGSCSYEVTVETS
Sbjct: 1   MDTPPSFLMLLLLLSFLAVVCSAVVPTPITLDPDVPPSSLPIDYIQEVGSCSYEVTVETS 60

Query: 61  CASPSSITSEIGVLFGDTYGNQIIEKKLGTGDKVFGSCKTDSFVLKDRPCIIQISYMYIY 120
           CASPSSITSEIGVLFGDTYGNQIIEKKLGTGDKVFGSCKTDSFVLKDRPCIIQISYMYIY
Sbjct: 61  CASPSSITSEIGVLFGDTYGNQIIEKKLGTGDKVFGSCKTDSFVLKDRPCIIQISYMYIY 120

Query: 121 KDGADDWLPNSVEISGSGINPLLFIFKSSIPTNTWFGFDLRQYTFPPPPSVFPAPPPPSH 180
           KDGADDWLPNSVEISGSGINPLLFIFKSSIPTNTWFGFDLRQYTFPPPPSVFPAPPPPSH
Sbjct: 121 KDGADDWLPNSVEISGSGINPLLFIFKSSIPTNTWFGFDLRQYTFPPPPSVFPAPPPPSH 180

Query: 181 PLVPPPEPIFSSPPPPPKPILPPPPPPPQPTPPSSSSKISGQKWGMVSVILGLLTALL 238
           PLVPPPEPIFSSPPPPPKPILPPPPPPPQPTPPSSSSKISGQKWGMVSVILGLLTALL
Sbjct: 181 PLVPPPEPIFSSPPPPPKPILPPPPPPPQPTPPSSSSKISGQKWGMVSVILGLLTALL 238

[Close]

BLAST of CsGy3G016350 vs. ExPASy TrEMBL
Match: A0A1S3AYN6 (sulfated surface glycoprotein 185-like OS=Cucumis melo OX=3656 GN=LOC103484013 PE=4 SV=1)

HSP 1 Score: 387 bits (993), Expect = 3.49e-134
Identity = 213/247 (86.23%), Postives = 220/247 (89.07%), Query Frame = 0


Query: 1   MDTPPS-FLMLLLLLSFLAVVCSAVVPTPITLDPDVPPSSLPIDYIQEVGSCSYEVTVET 60
           MDTPPS F +LLL LSFLAVVCSAV+P PITLDP+V PSSLPI YIQEVGSCSY VTV T
Sbjct: 1   MDTPPSPFFLLLLPLSFLAVVCSAVLPAPITLDPEVAPSSLPIHYIQEVGSCSYYVTVAT 60

Query: 61  SCASPSSITSEIGVLFGDTYGNQIIEKKLGTGDKVFGSCKTDSFVLKDRPCIIQISYMYI 120
           SCASPSSI SEIGVLFGDTYGNQIIEKKL  GDKVFGSCKTDSFVLKDRPCI+QISYMYI
Sbjct: 61  SCASPSSIASEIGVLFGDTYGNQIIEKKLSNGDKVFGSCKTDSFVLKDRPCIVQISYMYI 120

Query: 121 YKDGADDWLPNSVEISGSGINPLLFIFKSSIPTNTWFGFDLRQYTFPPPP-SVFPAPP-- 180
           YKDG DDWLPNSVEISGSGINPLLFIFKSSIPTNTWFGFDLRQYTFPPPP SVFPAPP  
Sbjct: 121 YKDGDDDWLPNSVEISGSGINPLLFIFKSSIPTNTWFGFDLRQYTFPPPPPSVFPAPPLP 180

Query: 181 -----PPSHPLVPPPEPIFSSPPPPPKPILPPPPPPPQPTPPSSSSKISGQKWGMVSVIL 238
                PP +P VPPPEP+F  PPPPPKP+LPPPPPP  PTPPSSSSKISGQK GMVSVIL
Sbjct: 181 WLSPPPPPYPTVPPPEPVFPPPPPPPKPVLPPPPPPAHPTPPSSSSKISGQKSGMVSVIL 240

[Close]

BLAST of CsGy3G016350 vs. ExPASy TrEMBL
Match: A0A5A7SRP1 (Sulfated surface glycoprotein 185-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold239G00110 PE=4 SV=1)

HSP 1 Score: 384 bits (985), Expect = 5.76e-133
Identity = 212/247 (85.83%), Postives = 219/247 (88.66%), Query Frame = 0


Query: 1   MDTPPS-FLMLLLLLSFLAVVCSAVVPTPITLDPDVPPSSLPIDYIQEVGSCSYEVTVET 60
           MDTPPS F +LLL LSFLAVVCSAV+P PITLDP+V PSSLPI YIQEVGSCSY VTV T
Sbjct: 1   MDTPPSPFFLLLLPLSFLAVVCSAVLPAPITLDPEVAPSSLPIHYIQEVGSCSYYVTVAT 60

Query: 61  SCASPSSITSEIGVLFGDTYGNQIIEKKLGTGDKVFGSCKTDSFVLKDRPCIIQISYMYI 120
           SCASPSSI SEIGVLFGDTYGNQIIEKKL  GDKVFGSCKTDSFVLKDRPCI+QISYMYI
Sbjct: 61  SCASPSSIASEIGVLFGDTYGNQIIEKKLSNGDKVFGSCKTDSFVLKDRPCIVQISYMYI 120

Query: 121 YKDGADDWLPNSVEISGSGINPLLFIFKSSIPTNTWFGFDLRQYTFPPPP-SVFPAPP-- 180
           YKDG DDWLPNSVEISGSGINPLLFIFKSSIPTNTWFGFDLRQYTFPPPP SVFPAPP  
Sbjct: 121 YKDGDDDWLPNSVEISGSGINPLLFIFKSSIPTNTWFGFDLRQYTFPPPPPSVFPAPPLP 180

Query: 181 -----PPSHPLVPPPEPIFSSPPPPPKPILPPPPPPPQPTPPSSSSKISGQKWGMVSVIL 238
                PP +P VPPPEP+F  PPPP KP+LPPPPPP  PTPPSSSSKISGQK GMVSVIL
Sbjct: 181 WLSPPPPPYPTVPPPEPVFPPPPPPSKPVLPPPPPPAHPTPPSSSSKISGQKSGMVSVIL 240

[Close]

BLAST of CsGy3G016350 vs. ExPASy TrEMBL
Match: A0A6J1E5Y4 (embryo-specific protein ATS3B-like isoform X3 OS=Cucurbita moschata OX=3662 GN=LOC111430882 PE=4 SV=1)

HSP 1 Score: 317 bits (812), Expect = 2.21e-106
Identity = 187/265 (70.57%), Postives = 200/265 (75.47%), Query Frame = 0


Query: 2   DTPPSFLMLLLLLSFLAVVCSAVVPTPITLDPDVPPSSLPIDYIQEVGSCSYEVTVETSC 61
            +PP  L+LLLLLS LAVVCSAV P  IT+ PDV P SL I+YIQEVGSCSYEVTV TSC
Sbjct: 5   SSPP--LLLLLLLSALAVVCSAVEPPQITVKPDVAPESLQINYIQEVGSCSYEVTVATSC 64

Query: 62  ASPSSITSEIGVLFGDTYGNQIIEKKLGTGDKVFGSCKTDSFVLKDRPCIIQISYMYIYK 121
           +SPS IT EIGVLFGD++GNQI+EKKL  GDKVF SC TD FVL DRPC +QISYMYIYK
Sbjct: 65  SSPSFITDEIGVLFGDSHGNQIVEKKLSNGDKVFDSCNTDRFVLNDRPCSVQISYMYIYK 124

Query: 122 DGADDWLPNSVEISGSGINPLLFIFKSSIPTNTWFGFDLRQYTF---------------- 181
           DGADDWLPNSVEISGSGI P+LFIFKSSIP+NTWFGFDLRQY F                
Sbjct: 125 DGADDWLPNSVEISGSGIKPVLFIFKSSIPSNTWFGFDLRQYPFLSPPSYNPYPPFPSLS 184

Query: 182 PPPPSVFPAPPPPSHPLVPPPEPIFSSPPPPPKPILPPPPPPPQPTP------------P 238
           PPPP   P PPPP HPL PPPEPIFS PPPPPKP+LPPPPPPP P P            P
Sbjct: 185 PPPPP--PPPPPPPHPLPPPPEPIFS-PPPPPKPVLPPPPPPPPPKPVLPPPPPPPPPPP 244

[Close]

BLAST of CsGy3G016350 vs. ExPASy TrEMBL
Match: A0A6J1E5A6 (embryo-specific protein ATS3B-like isoform X4 OS=Cucurbita moschata OX=3662 GN=LOC111430882 PE=4 SV=1)

HSP 1 Score: 316 bits (809), Expect = 3.53e-106
Identity = 184/253 (72.73%), Postives = 197/253 (77.87%), Query Frame = 0


Query: 2   DTPPSFLMLLLLLSFLAVVCSAVVPTPITLDPDVPPSSLPIDYIQEVGSCSYEVTVETSC 61
            +PP  L+LLLLLS LAVVCSAV P  IT+ PDV P SL I+YIQEVGSCSYEVTV TSC
Sbjct: 5   SSPP--LLLLLLLSALAVVCSAVEPPQITVKPDVAPESLQINYIQEVGSCSYEVTVATSC 64

Query: 62  ASPSSITSEIGVLFGDTYGNQIIEKKLGTGDKVFGSCKTDSFVLKDRPCIIQISYMYIYK 121
           +SPS IT EIGVLFGD++GNQI+EKKL  GDKVF SC TD FVL DRPC +QISYMYIYK
Sbjct: 65  SSPSFITDEIGVLFGDSHGNQIVEKKLSNGDKVFDSCNTDRFVLNDRPCSVQISYMYIYK 124

Query: 122 DGADDWLPNSVEISGSGINPLLFIFKSSIPTNTWFGFDLRQYTF---------------- 181
           DGADDWLPNSVEISGSGI P+LFIFKSSIP+NTWFGFDLRQY F                
Sbjct: 125 DGADDWLPNSVEISGSGIKPVLFIFKSSIPSNTWFGFDLRQYPFLSPPSYNPYPPFPSLS 184

Query: 182 PPPPSVFPAPPPPSHPLVPPPEPIFSSPPPPPKPILPPPPPPPQPTPPSSSSKISGQKWG 238
           PPPP   P PPPP HPL PPPEPIFS PPPPPKP+LPPPPPPP     SSSSKISG K  
Sbjct: 185 PPPPP--PPPPPPPHPLPPPPEPIFS-PPPPPKPVLPPPPPPP-----SSSSKISGLKLA 244

[Close]

BLAST of CsGy3G016350 vs. TAIR 10
Match: AT5G62200.1 (Embryo-specific protein 3, (ATS3) )

HSP 1 Score: 106.3 bits (264), Expect = 3.5e-23
Identity = 55/156 (35.26%), Postives = 90/156 (57.69%), Query Frame = 0


Query: 6   SFLMLLLLLSFLAVVCSAVVPTPITLDPDVPPSSLPIDYIQEVG-SCSYEVTVETSCASP 65
           S  +   L+SF+ ++ ++V  + + LDP     S  +  IQ++G +C+Y V + TSC+S 
Sbjct: 3   SVRLFFTLISFVFIISTSVYESKV-LDPPHVAESFNVSLIQKLGNTCAYTVIISTSCSST 62

Query: 66  SSITSEIGVLFGDTYGNQIIEKKL-GTGDKVFGSCKTDSFVLKDRPCIIQISYMYIYKDG 125
                +I V FGD YGNQI   +L     K F  C +D+F + + PC  QI Y+Y+Y+ G
Sbjct: 63  RYTRDQISVAFGDGYGNQIYAPRLDDPSTKTFEQCSSDTFQI-NGPCTYQICYVYLYRSG 122

Query: 126 ADDWLPNSVEISGSGINPLLFIFKSSIPTNTWFGFD 160
            D W+PN+V+I   G   + F + + +P + W+GF+
Sbjct: 123 PDGWIPNTVKIYSHGSKAVTFPYNTYVPESVWYGFN 156

[Close]

BLAST of CsGy3G016350 vs. TAIR 10
Match: AT2G41475.1 (Embryo-specific protein 3, (ATS3) )

HSP 1 Score: 99.8 bits (247), Expect = 3.2e-21
Identity = 48/157 (30.57%), Postives = 84/157 (53.50%), Query Frame = 0


Query: 5   PSFLMLLLLLSFLAVVCSAVVPTPITLDPDVPPSSLPIDYIQEVGSCSYEVTVETSCASP 64
           P FL  L   +  +   S +   P+ +D  +P   L     +   +CSY V ++TSC+S 
Sbjct: 7   PLFLFALCSFTLFSSARSFITTKPLPIDSFIPKPKL-----ENAAACSYTVIIKTSCSSV 66

Query: 65  SSITSEIGVLFGDTYGNQIIEKKL-GTGDKVFGSCKTDSFVLKDRPCIIQISYMYIYKDG 124
           S    +I + FGD YGN++  K+L     + F  C +D++ +   PC+  + Y+Y+ + G
Sbjct: 67  SYTRDKISISFGDVYGNEVYVKRLDDPSSRTFEKCSSDTYKISG-PCMRDVCYLYLLRQG 126

Query: 125 ADDWLPNSVEISGSGINPLLFIFKSSIPTNTWFGFDL 161
           +D W P +V+I GS I  + F +   +P + W+GF++
Sbjct: 127 SDGWKPENVKIYGSSIRSVTFYYNLFLPNSVWYGFNV 157

[Close]

BLAST of CsGy3G016350 vs. TAIR 10
Match: AT5G62210.1 (Embryo-specific protein 3, (ATS3) )

HSP 1 Score: 88.6 bits (218), Expect = 7.5e-18
Identity = 82/225 (36.44%), Postives = 117/225 (52.00%), Query Frame = 0


Query: 1   MDTPPSFLMLLLLLSFLAVVCSAVVPTPITLDPDVPPSSLPIDYIQEVGSCSYEVTVETS 60
           M+   S ++LLL+L F   + S      +T +P +  SSL    + E  SC Y V V TS
Sbjct: 1   MECSLSSILLLLVLCFTHPIPS------LTFEPLI--SSLD---LHEEESCPYTVIVTTS 60

Query: 61  CASPSSITSEIGVLFGDTYGNQIIEKKLG---TGDKVFGSCKTDSFVLKDRPCIIQISYM 120
           C SP     ++ +  GD   NQ++  +L    +G   F  C +D+F +K + C+  I  +
Sbjct: 61  CFSPDWSRDQVTIALGDADDNQVVAPRLDKPLSGGGGFEKCSSDTFQVKGK-CLNTICSV 120

Query: 121 YIYKDGADDWLPNSVEISGSGINPLLFIFKSSIPTNTWFGFDLRQYTFPPPPSVFPAPPP 180
           YIY+ G D W+P +VEI   G   + F F  ++P N W+G +    T  PPPS      P
Sbjct: 121 YIYRSGTDGWIPETVEIYKEGSKSVKFDFNKNVPENIWYGNNYCNNTDLPPPS---PDFP 180

Query: 181 PSHPLVPPPEPIFSSPPPPPKPILPPPPPPPQPTPPSSSSKISGQ 223
           P  P +PPP P    P  PP+P   PPPPPP P P ++S + SGQ
Sbjct: 181 PFSPSIPPPSP----PYFPPEPPSIPPPPPPSP-PSAASGRGSGQ 205

[Close]

BLAST of CsGy3G016350 vs. TAIR 10
Match: AT5G07190.1 (seed gene 3 )

HSP 1 Score: 87.0 bits (214), Expect = 2.2e-17
Identity = 60/155 (38.71%), Postives = 82/155 (52.90%), Query Frame = 0


Query: 49  GSCSYEVTVETSCASPSSITSEIGVLFGDTYGNQIIEKKLG---TGDKVFGSCKTDSFVL 108
           G+C Y V V TSC SP S   +I ++FGD  GN++   KLG    G    G C T++F +
Sbjct: 32  GTCPYTVVVMTSCLSPESTRDQISIVFGDADGNKVYAPKLGGLVRGPGGLGKCSTNTFQV 91

Query: 109 KDRPCIIQISYMYIYKDGADDWLPNSVEISGSGINPLLFIFKSSIP-TNTWFGFDLRQYT 168
           + +     I  +YI ++G D W+P S+EI   G   + F F  S+P  NTW+G +    T
Sbjct: 92  RGQCLNDPICSLYINRNGPDGWVPESIEIYSEGSKSVKFDFSKSVPQLNTWYGHNNCNTT 151

Query: 169 FPPPPSVFPAPPPPSHPLVPPPEPIFSSPPPPPKP 200
             P     P  PPP  P   PPE   + PPPPP+P
Sbjct: 152 GRPSS---PDLPPPHFPPEFPPETPTTPPPPPPRP 183

[Close]

BLAST of CsGy3G016350 vs. TAIR 10
Match: AT5G07190.2 (seed gene 3 )

HSP 1 Score: 87.0 bits (214), Expect = 2.2e-17
Identity = 60/155 (38.71%), Postives = 82/155 (52.90%), Query Frame = 0


Query: 49  GSCSYEVTVETSCASPSSITSEIGVLFGDTYGNQIIEKKLG---TGDKVFGSCKTDSFVL 108
           G+C Y V V TSC SP S   +I ++FGD  GN++   KLG    G    G C T++F +
Sbjct: 4   GTCPYTVVVMTSCLSPESTRDQISIVFGDADGNKVYAPKLGGLVRGPGGLGKCSTNTFQV 63

Query: 109 KDRPCIIQISYMYIYKDGADDWLPNSVEISGSGINPLLFIFKSSIP-TNTWFGFDLRQYT 168
           + +     I  +YI ++G D W+P S+EI   G   + F F  S+P  NTW+G +    T
Sbjct: 64  RGQCLNDPICSLYINRNGPDGWVPESIEIYSEGSKSVKFDFSKSVPQLNTWYGHNNCNTT 123

Query: 169 FPPPPSVFPAPPPPSHPLVPPPEPIFSSPPPPPKP 200
             P     P  PPP  P   PPE   + PPPPP+P
Sbjct: 124 GRPSS---PDLPPPHFPPEFPPETPTTPPPPPPRP 155

The following BLAST results are available for this feature:

BLAST of CsGy3G016350 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q6NPM5	4.9e-22	35.26	Embryo-specific protein ATS3B OS=Arabidopsis thaliana OX=3702 GN=ATS3B PE=1 SV=1	[more]
Q681K2	4.6e-20	30.57	Embryo-specific protein ATS3A OS=Arabidopsis thaliana OX=3702 GN=ATS3A PE=1 SV=1	[more]
Q9LYP6	3.1e-16	38.71	Embryo-specific protein ATS3 OS=Arabidopsis thaliana OX=3702 GN=ATS3 PE=2 SV=1	[more]

BLAST of CsGy3G016350 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004148123.1	1.59e-160	100.00	embryo-specific protein ATS3B [Cucumis sativus] >KGN57303.1 hypothetical protein...	[more]
XP_008439123.1	7.20e-134	86.23	PREDICTED: sulfated surface glycoprotein 185-like [Cucumis melo]	[more]
KAA0033580.1	1.19e-132	85.83	sulfated surface glycoprotein 185-like [Cucumis melo var. makuwa]	[more]
XP_038877437.1	7.68e-112	75.00	embryo-specific protein ATS3B-like [Benincasa hispida]	[more]
KAG6576773.1	1.05e-107	75.71	Embryo-specific protein ATS3B, partial [Cucurbita argyrosperma subsp. sororia]	[more]

BLAST of CsGy3G016350 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L699	7.71e-161	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G177960 PE=4 SV=1	[more]
A0A1S3AYN6	3.49e-134	86.23	sulfated surface glycoprotein 185-like OS=Cucumis melo OX=3656 GN=LOC103484013 P...	[more]
A0A5A7SRP1	5.76e-133	85.83	Sulfated surface glycoprotein 185-like OS=Cucumis melo var. makuwa OX=1194695 GN...	[more]
A0A6J1E5Y4	2.21e-106	70.57	embryo-specific protein ATS3B-like isoform X3 OS=Cucurbita moschata OX=3662 GN=L...	[more]
A0A6J1E5A6	3.53e-106	72.73	embryo-specific protein ATS3B-like isoform X4 OS=Cucurbita moschata OX=3662 GN=L...	[more]

BLAST of CsGy3G016350 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G62200.1	3.5e-23	35.26	Embryo-specific protein 3, (ATS3)	[more]
AT2G41475.1	3.2e-21	30.57	Embryo-specific protein 3, (ATS3)	[more]
AT5G62210.1	7.5e-18	36.44	Embryo-specific protein 3, (ATS3)	[more]
AT5G07190.1	2.2e-17	38.71	seed gene 3	[more]
AT5G07190.2	2.2e-17	38.71	seed gene 3	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (Gy14) v2.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR010417	Embryo-specific ATS3	PFAM	PF06232	ATS3	coord: 47..159 e-value: 1.5E-30 score: 105.7
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 169..220
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 169..214
None	No IPR available	PANTHER	PTHR31718:SF32	EMBRYO-SPECIFIC PROTEIN ATS3B	coord: 8..235
None	No IPR available	PANTHER	PTHR31718	FAMILY NOT NAMED	coord: 8..235
IPR036392	PLAT/LH2 domain superfamily	SUPERFAMILY	49723	Lipase/lipooxygenase domain (PLAT/LH2 domain)	coord: 48..157

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsGy3G016350.1	CsGy3G016350.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005737	cytoplasm
molecular_function	GO:0005515	protein binding