CsGy3G011960 (gene) Cucumber (Gy14) v2.1

Overview
NameCsGy3G011960
Typegene
OrganismCucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
Description60S ribosomal protein L14-2-like
LocationGy14Chr3: 9127159 .. 9131459 (+)
RNA-Seq ExpressionCsGy3G011960
SyntenyCsGy3G011960
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
GTTTTCTCAAAAAAAGAAAAAAAAAGTATTATAAATTTATAATATCCTTAGAACGATCATTTTATAAAAAAAAAAATGAAAAGAAATAATTGAGGGCCATGGGGGCTAAATCGTAAATAAGTTAAACAGTCGGTTTTTCCGTCGAAAGGATTATTTGGATCTACGTGGGAATAATAAACCCTAGTTTCGAGTTTCGACATTGGCGCTCTAAAATCTTCTTTCTTCTCTCGCCCCTCGCTGAAACTCATCTCACACCGAACATGGTAAGCATTCACCTCCATAGTTTCTCTCTTTCTAGCTACGAATTTATAGCATTTGTTGGTATAATTTTCTTCCTTTGATTTCTTTTCTTCTTCTGAATTTTATCTTCTTTCATTGCTTCTGCAGCCGTTCAAGAGATACGTTGAGATCGGAAGAGTCGCTCTCGTCAACTACGGCGAAGACTATGGAAAGCTTGTCGTCATTGTCGATGTTATCGACCAGAACAGAGTATGTTTCTTTTTCTTGCTATTTGTGGTTTTCATCGACGATTGCTTTTAATTCCTACACATTAGGAAGTTCCGGGATGTTTCACTCTTGTTATAGATTCATTTCTCCTGAATTTGAAGTTTACATTAGGATCTTAAAATATGCTTCTCAATTTCCTGTTATTTATCATTATGTAAATCACTCCTCAGCTTCTTCAACCGCGTCTACTTGTAGTGGTAATTGTTGATGTAAACTATAACATCGATTATTTAACTTCCGATTCGTTGAGTAGGTCGTTCTCGTTGTTTGGATATTATTGATCGTTAGAGTGGTTGCCTGTGCAAACTATGATATTCTCCGACGTCCTCCACCAGCTTAAAAAATGGATTTTTAGTTAATTTTTACTGTTTCTTCTACTTCCCATGAATTACAAATTCAGATTCATGTCACACAATCTTTGTGAAACTTTGAAGCTTGCAGTCTGATGGGAACTTTTTTTTTTCTTTCAACTGAATTTTATTCTGCAATATCAGTGTTTATTGGTTGAGAAAGAGTATCTGGATGAAATTATCATTTGTGTCCACAGTTTTGTTTTTAGTTTTGTATGTTTCGTTATCATTTCCTGGTGTATGTGTATCGGTTTTATTTTCTATTAGATTTTATTTGTTGTTCATTCTATGCATATTTTTCTATGCTACCACATACAGGCTTTGGTGGATGCTCCTGATATGGTCAGATCTCAAATGAACTTCAAGAGACTTTCTCTCACTGACATTAAAATTGACATTAAGAGAGTCCCTAGGAAGAAGGAACTCATGGAAGCTATGAAGGCTGCTGGTACCCTTCTTAACTTAATTCTCACTTATATAATCCTCATCACACCTGTGTTTCTTGTTTTTGTTTGTTCTAAGTTTAACCTATTGTTTTGATCATGTCAGATGTTCAGAAAAAGTGGGAGGATAGCTCTTGGGGAAGAAAGTTACTCGTGAAACAAAGAAGGGCATCACTTAATGATTTCGATAGGTTCAAACTTATGCTGGCTAAGATAAAGGTCAGTGACAATGTGATTCAATCTGTAGTTTGTTGCTTTCTTTTGTTTGTTCTTTTACCATTTCTTATGCATTGACACATGAAAAAGTGCAAAAGAAGTTATTTTAAATTTGCATGAAAGAGAGTGAGAGAAGTTTTGTTTAATTTGTCATTAAAAATTAATTTTCTATTTTATTGTTTCTTGCTATTTGTTTGATGATTACTCAATGATATGGATCAGCATTGTTTATTTATTTATTTATTTTTCCTTTGCAGAGAGCCGGATTGGTGAGGCAAGAACTTGCTAAGCTGAAAAAGAGTGCATCTTAGAAAGTGTGTTTCTTAAGCTTCAAATTTTGTTATGAGTTAAAGTTATCAGTTTTGGATTGTTCTCTCTTGTTTCTTTAGCCTTCAGGAGGCCGCGTTTGTTTTGAGGTCGATGGATTCTGGCATACAGTGTTGTGAGTTTTTTCTTAACTTTTTTCACAAGATATCCACACTACTCCAATTAAGCATTAATCTGAATCTGTTGATGTTTCTCTGCTTAATTTTTTAATTTGATTTCTGTGCCACCAGATTTGGTTTTTGTTTTCTGAATTTTATGTCTGACTTCCCTTGAGTGCCAATGCCGACGAAATATTTGGTACAGTAGTCATGCTACAAAATGCAATATTGTTTGCTATTTATACATCTGAATATGTGATTTCAAGTATGGCGTCATGGCTAAGCCTGCTTCATTTGGTTTTAACTTTTACCAAAAGTACTATCCTCTACAAAGGATATCCCATTTAGAAACATTTCGTTGCTAACGAAATCTTAGTGCAGTATCGTAGTCTCATTTCTACATTCATTGCATTTGTTAGAAACTCTTCTATATCATTCATCGCATTTATTAGAAGCTCTTCGAAATCCTGCTCTCGCTGGATGGTTAGGACTCAAAGCCGCGAGCTTTGAGCAAACTCCACCTAGAAAACTTGCTGGTTTCTCTTCCTCATCCTCAGGTTCAATTAGACAACCATCCTCTTCGATTGGGGGGCAGTCCCAAAGGTGTTTTCCATTGGTATTGAATTTGCTTGCAGGAGAGTTTTTGTCATTTCCCGTTCCTTTCCAAATATGCCTCTCAATGGCTTCCTCCGGGTATGAGAAGTTTTCAAATTTGTTTTCCCCGTGTAAATCACTCCACGCGGGGCTCGTAATTGTAGAATATGAATCAAATGATGAAGTTCTTGATGAACCGTATGAAAAGCTGGGTGAGAAGTTTGGTGAGAATGTTGATGACGACGAAGACGGGGATGAACTACTTCCAAATCCTTGAATTTCTCTTGTTATTTTCAGAGCTCTCAAACGTGATTCTTGTAAGATCTGGCCACCTTTCAGAAGTTGTAGTATCTTTTGTGACTTTTGGTGCATGATCTCACCCCAGTTAAACCTATCAATCACACCATTAGAAATCTAATCAATTATCTCTCAAGTAAAAGCCTTTCTTAGAACTTGGGTGCAACTCTGATTTTGATTAAAATCAATTTAGTACCCCCTTTCATCTATGTGTTTAAAAGTTCCAAGTTCTTCGATGATATATGAATCACACTTGAATTCGTCGGCTATTTCTTCTGGTCCGTGGGTTAACAAAAACTCAAGGAGTACCAGTGATTTGTAGGATTGTTTCCACTGCTTCCACTCAATGTTATGTAGCCTTGCAATTTACAAAAGTAAATAAATAAATAAAACAAATTTGTGACAACTTTCGATTGAGCCAACATGATAATGCATTGCAGGATGTAGTGGAGTGCTCTATGACGTAAGTGAAATGTTAGTTGTCATTAATTGTATAGGATGAACATAATTTCTTATTATTGAGCCATCTATATAAAAATCTTGAATGTTAATTATACTCACCGATTGTGAAGGACATCGACAATTCTCCAATAATCATCTACCTCAAAGGATGCCTCAGCTATTGTTGTCATTGTTTTAGCATCAGGGCTACATGGATCTTTGTTTGTAGCTTCCTCTGCCAACCTTGAGAAACAGATGAAAATAGAACACCAATTCTTAATCTAATTTTTTCTATGGCTGTGTGTTCATCAAAATTCTATATGTTCTTCGATACCAAATTATTCATTGGATATTCAACAATATAAGTGGATGAATATATCCATATAATTTGACATTCGGAAATAGTAAAGGAAATTTAAACGGAACAAACAAAAAAGGGGGGAAATGCTTACAATTCTGCCGGAGTAACATCAGTAAAAACAAGCCTGGCTACTTTGAATCTCTCGTGTAGGAAAGAAGAAGCTTGTTTCTTGAACTGATCAAGGGACATTCTTCGATCGAACTCCAATTTCTCTTTTCTTTTTTTAAGAAAAGTTATGAATTCGTGAATTATATATACGAGATGTTATTCTATGGACACCCTTGAGTGTAGGTAAGAAATTTGATGCAAAGATTCTCTAATTTTAGAAATTATACATGACTTGTTTTAGTCCCCAATCCTTCTATGTCTCTATATTTAGGCGGAGAAAAGAGCACCACCAAATTGAAGTGGACTTCAAATTCAATTCCTACACACACATACGTATGTACTTATAAGAACCTTCCAGCATTTTAGACATCACCATTCATTTTATTTCATTTGTTAATTAGATTAGTTTTGGCAAGGATATAATTCTATAGATAGTAAAGTCTGTTATAAGTTTTGCAATTAATTCAAACATTACCCTTCAGACCTTAACTCATTTCTATGTTCTAACAATATTTGGTTCGTACTAAGAAAACAAAATTTGAATGGTAGATATATACCT

mRNA sequence

GTTTTCTCAAAAAAAGAAAAAAAAAGTATTATAAATTTATAATATCCTTAGAACGATCATTTTATAAAAAAAAAAATGAAAAGAAATAATTGAGGGCCATGGGGGCTAAATCGTAAATAAGTTAAACAGTCGGTTTTTCCGTCGAAAGGATTATTTGGATCTACGTGGGAATAATAAACCCTAGTTTCGAGTTTCGACATTGGCGCTCTAAAATCTTCTTTCTTCTCTCGCCCCTCGCTGAAACTCATCTCACACCGAACATGCCGTTCAAGAGATACGTTGAGATCGGAAGAGTCGCTCTCGTCAACTACGGCGAAGACTATGGAAAGCTTGTCGTCATTGTCGATGTTATCGACCAGAACAGAGCTTTGGTGGATGCTCCTGATATGGTCAGATCTCAAATGAACTTCAAGAGACTTTCTCTCACTGACATTAAAATTGACATTAAGAGAGTCCCTAGGAAGAAGGAACTCATGGAAGCTATGAAGGCTGCTGATGTTCAGAAAAAGTGGGAGGATAGCTCTTGGGGAAGAAAGTTACTCGTGAAACAAAGAAGGGCATCACTTAATGATTTCGATAGGTTCAAACTTATGCTGGCTAAGATAAAGAGAGCCGGATTGGTGAGGCAAGAACTTGCTAAGCTGAAAAAGAGTGCATCTTAGAAAGTGTGTTTCTTAAGCTTCAAATTTTGTTATGAGTTAAAGTTATCAGTTTTGGATTGTTCTCTCTTGTTTCTTTAGCCTTCAGGAGGCCGCGTTTGTTTTGAGGTCGATGGATTCTGGCATACAGTGTTGTGAGTTTTTTCTTAACTTTTTTCACAAGATATCCACACTACTCCAATTAAGCATTAATCTGAATCTGTTGATGTTTCTCTGCTTAATTTTTTAATTTGATTTCTGTGCCACCAGATTTGGTTTTTGTTTTCTGAATTTTATGTCTGACTTCCCTTGAGTGCCAATGCCGACGAAATATTTGGTACAGTAGTCATGCTACAAAATGCAATATTGTTTGCTATTTATACATCTGAATATGTGATTTCAAGTATGGCGTCATGGCTAAGCCTGCTTCATTTGGTTTTAACTTTTACCAAAAGTACTATCCTCTACAAAGGATATCCCATTTAGAAACATTTCGTTGCTAACGAAATCTTAGTGCAGTATCGTAGTCTCATTTCTACATTCATTGCATTTGTTAGAAACTCTTCTATATCATTCATCGCATTTATTAGAAGCTCTTCGAAATCCTGCTCTCGCTGGATGGTTAGGACTCAAAGCCGCGAGCTTTGAGCAAACTCCACCTAGAAAACTTGCTGGTTTCTCTTCCTCATCCTCAGGTTCAATTAGACAACCATCCTCTTCGATTGGGGGGCAGTCCCAAAGGTGTTTTCCATTGGTATTGAATTTGCTTGCAGGAGAGTTTTTGTCATTTCCCGTTCCTTTCCAAATATGCCTCTCAATGGCTTCCTCCGGGTATGAGAAGTTTTCAAATTTGTTTTCCCCGTGTAAATCACTCCACGCGGGGCTCGTAATTGTAGAATATGAATCAAATGATGAAGTTCTTGATGAACCGTATGAAAAGCTGGGTGAGAAGTTTGGTGAGAATGTTGATGACGACGAAGACGGGGATGAACTACTTCCAAATCCTTGAATTTCTCTTGTTATTTTCAGAGCTCTCAAACGTGATTCTTGTAAGATCTGGCCACCTTTCAGAAGTTGTAGTATCTTTTGTGACTTTTGGTGCATGATCTCACCCCAGTTAAACCTATCAATCACACCATTAGAAATCTAATCAATTATCTCTCAAGTAAAAGCCTTTCTTAGAACTTGGGTGCAACTCTGATTTTGATTAAAATCAATTTAGTACCCCCTTTCATCTATGTGTTTAAAAGTTCCAAGTTCTTCGATGATATATGAATCACACTTGAATTCGTCGGCTATTTCTTCTGGTCCGTGGGTTAACAAAAACTCAAGGAGTACCAGTGATTTGTAGGATTGTTTCCACTGCTTCCACTCAATGTTATGTAGCCTTGCAATTTACAAAAGTAAATAAATAAATAAAACAAATTTGTGACAACTTTCGATTGAGCCAACATGATAATGCATTGCAGGATGTAGTGGAGTGCTCTATGACGTAAGTGAAATGTTAGTTGTCATTAATTGTATAGGATGAACATAATTTCTTATTATTGAGCCATCTATATAAAAATCTTGAATGTTAATTATACTCACCGATTGTGAAGGACATCGACAATTCTCCAATAATCATCTACCTCAAAGGATGCCTCAGCTATTGTTGTCATTGTTTTAGCATCAGGGCTACATGGATCTTTGTTTGTAGCTTCCTCTGCCAACCTTGAGAAACAGATGAAAATAGAACACCAATTCTTAATCTAATTTTTTCTATGGCTGTGTGTTCATCAAAATTCTATATGTTCTTCGATACCAAATTATTCATTGGATATTCAACAATATAAGTGGATGAATATATCCATATAATTTGACATTCGGAAATAGTAAAGGAAATTTAAACGGAACAAACAAAAAAGGGGGGAAATGCTTACAATTCTGCCGGAGTAACATCAGTAAAAACAAGCCTGGCTACTTTGAATCTCTCGTGTAGGAAAGAAGAAGCTTGTTTCTTGAACTGATCAAGGGACATTCTTCGATCGAACTCCAATTTCTCTTTTCTTTTTTTAAGAAAAGTTATGAATTCGTGAATTATATATACGAGATGTTATTCTATGGACACCCTTGAGTGTAGGTAAGAAATTTGATGCAAAGATTCTCTAATTTTAGAAATTATACATGACTTGTTTTAGTCCCCAATCCTTCTATGTCTCTATATTTAGGCGGAGAAAAGAGCACCACCAAATTGAAGTGGACTTCAAATTCAATTCCTACACACACATACGTATGTACTTATAAGAACCTTCCAGCATTTTAGACATCACCATTCATTTTATTTCATTTGTTAATTAGATTAGTTTTGGCAAGGATATAATTCTATAGATAGTAAAGTCTGTTATAAGTTTTGCAATTAATTCAAACATTACCCTTCAGACCTTAACTCATTTCTATGTTCTAACAATATTTGGTTCGTACTAAGAAAACAAAATTTGAATGGTAGATATATACCT

Coding sequence (CDS)

ATGCCGTTCAAGAGATACGTTGAGATCGGAAGAGTCGCTCTCGTCAACTACGGCGAAGACTATGGAAAGCTTGTCGTCATTGTCGATGTTATCGACCAGAACAGAGCTTTGGTGGATGCTCCTGATATGGTCAGATCTCAAATGAACTTCAAGAGACTTTCTCTCACTGACATTAAAATTGACATTAAGAGAGTCCCTAGGAAGAAGGAACTCATGGAAGCTATGAAGGCTGCTGATGTTCAGAAAAAGTGGGAGGATAGCTCTTGGGGAAGAAAGTTACTCGTGAAACAAAGAAGGGCATCACTTAATGATTTCGATAGGTTCAAACTTATGCTGGCTAAGATAAAGAGAGCCGGATTGGTGAGGCAAGAACTTGCTAAGCTGAAAAAGAGTGCATCTTAG

Protein sequence

MPFKRYVEIGRVALVNYGEDYGKLVVIVDVIDQNRALVDAPDMVRSQMNFKRLSLTDIKIDIKRVPRKKELMEAMKAADVQKKWEDSSWGRKLLVKQRRASLNDFDRFKLMLAKIKRAGLVRQELAKLKKSAS*
Homology
[Close]
BLAST of CsGy3G011960 vs. ExPASy Swiss-Prot
Match: Q9T043 (60S ribosomal protein L14-2 OS=Arabidopsis thaliana OX=3702 GN=RPL14B PE=1 SV=1)

HSP 1 Score: 210.7 bits (535), Expect = 1.0e-53
Identity = 108/130 (83.08%), Postives = 121/130 (93.08%), Query Frame = 0 

Query: 1   MPFKRYVEIGRVALVNYGEDYGKLVVIVDVIDQNRALVDAPDMVRSQMNFKRLSLTDIKI 60
           M FKRYVEIGRVALVNYGED+GKLVVIVDV+DQNRALVDAPDM R QMNFKRLSLTDI I
Sbjct: 1   MGFKRYVEIGRVALVNYGEDHGKLVVIVDVVDQNRALVDAPDMERIQMNFKRLSLTDIVI 60

Query: 61  DIKRVPRKKELMEAMKAADVQKKWEDSSWGRKLLVKQRRASLNDFDRFKLMLAKIKRAGL 120
           DI RVP+KK L+EAM+ ADV+ KWE SSWGRKL+V++RRA+LNDFDRFK+MLAKIK+AG+
Sbjct: 61  DINRVPKKKALIEAMEKADVKNKWEKSSWGRKLIVQKRRANLNDFDRFKIMLAKIKKAGV 120

Query: 121 VRQELAKLKK 131
           VRQELAKLKK
Sbjct: 121 VRQELAKLKK 130

[Close]
BLAST of CsGy3G011960 vs. ExPASy Swiss-Prot
Match: Q9SIM4 (60S ribosomal protein L14-1 OS=Arabidopsis thaliana OX=3702 GN=RPL14A PE=2 SV=1)

HSP 1 Score: 208.8 bits (530), Expect = 3.9e-53
Identity = 107/130 (82.31%), Postives = 120/130 (92.31%), Query Frame = 0 

Query: 1   MPFKRYVEIGRVALVNYGEDYGKLVVIVDVIDQNRALVDAPDMVRSQMNFKRLSLTDIKI 60
           M FKR+VEIGRVALVNYGEDYGKLVVIVDV+DQNRALVDAPDM R QMN KRLSLTDI I
Sbjct: 1   MGFKRFVEIGRVALVNYGEDYGKLVVIVDVVDQNRALVDAPDMERIQMNLKRLSLTDIVI 60

Query: 61  DIKRVPRKKELMEAMKAADVQKKWEDSSWGRKLLVKQRRASLNDFDRFKLMLAKIKRAGL 120
           DI RVP+KK L+EAM+ ADV+ KWE SSWGRKL+V++RRA+LNDFDRFK+MLAKIKRAG+
Sbjct: 61  DINRVPKKKVLIEAMEKADVKNKWEKSSWGRKLIVQKRRAALNDFDRFKIMLAKIKRAGI 120

Query: 121 VRQELAKLKK 131
           VRQELAKLK+
Sbjct: 121 VRQELAKLKR 130

[Close]
BLAST of CsGy3G011960 vs. ExPASy Swiss-Prot
Match: P55844 (Probable 60S ribosomal protein L14 OS=Pisum sativum OX=3888 PE=2 SV=1)

HSP 1 Score: 208.4 bits (529), Expect = 5.1e-53
Identity = 105/133 (78.95%), Postives = 124/133 (93.23%), Query Frame = 0 

Query: 1   MPFKRYVEIGRVALVNYGEDYGKLVVIVDVIDQNRALVDAPDMVRSQMNFKRLSLTDIKI 60
           MPFKR+VEIGRVAL+NYG+DYG+LVVIVDVIDQ RALVDAPDM RS +NFKRLSLTD+KI
Sbjct: 1   MPFKRFVEIGRVALINYGKDYGRLVVIVDVIDQTRALVDAPDMERSPINFKRLSLTDLKI 60

Query: 61  DIKRVPRKKELMEAMKAADVQKKWEDSSWGRKLLVKQRRASLNDFDRFKLMLAKIKRAGL 120
           DIKRVP+KK+L++A++AADV+ KW  SSWGRKL+VK+ RA+LNDFDRFK+MLAKIKRA  
Sbjct: 61  DIKRVPKKKDLIKALEAADVKNKWAKSSWGRKLIVKKTRAALNDFDRFKIMLAKIKRAAG 120

Query: 121 VRQELAKLKKSAS 134
           VRQELAKLKK+A+
Sbjct: 121 VRQELAKLKKTAA 133

[Close]
BLAST of CsGy3G011960 vs. ExPASy Swiss-Prot
Match: O46160 (60S ribosomal protein L14 OS=Lumbricus rubellus OX=35632 GN=RPL14 PE=3 SV=1)

HSP 1 Score: 118.6 bits (296), Expect = 5.3e-26
Identity = 65/133 (48.87%), Postives = 87/133 (65.41%), Query Frame = 0 

Query: 1   MPFKRYVEIGRVALVNYGEDYGKLVVIVDVIDQNRALVDAP--DMVRSQMNFKRLSLTDI 60
           M F+R+VEIGRVA   YG D GKLV IVDVIDQNRALVD P   + R  MNFK L LT++
Sbjct: 1   MSFRRFVEIGRVARAVYGPDQGKLVAIVDVIDQNRALVDGPCTHVARKSMNFKELELTNL 60

Query: 61  KIDIKRVPRKKELMEAMKAADVQKKWEDSSWGRKLLVKQRRASLNDFDRFKLMLAKIKRA 120
           K       +   + +A +  ++ KKWE+S   +K+  K++R +L DF+RFKLM AK  R 
Sbjct: 61  KAKFPHSAKTGVVKKAWEKDEISKKWEESHLAKKIAAKEKRKTLTDFERFKLMKAKQARN 120

Query: 121 GLVRQELAKLKKS 132
            L++ E  KL+K+
Sbjct: 121 RLIKIEFGKLRKA 133

[Close]
BLAST of CsGy3G011960 vs. ExPASy Swiss-Prot
Match: Q7XYA7 (60S ribosomal protein L14 OS=Griffithsia japonica OX=83288 GN=RPL14 PE=2 SV=1)

HSP 1 Score: 117.1 bits (292), Expect = 1.5e-25
Identity = 66/132 (50.00%), Postives = 92/132 (69.70%), Query Frame = 0 

Query: 1   MPFKRYVEIGRVALVNYGEDYGKLVVIVDVIDQNRALVDAPD--MVRSQMNFKRLSLTDI 60
           M F R+VE GRVALV+YGE   KLVVIVD++DQNR LVD+P   + R  +N KR++LT I
Sbjct: 1   MTFTRFVEAGRVALVSYGEHLNKLVVIVDILDQNRILVDSPSHGLKRKVINVKRIALTSI 60

Query: 61  KI-DIKRVPRKKELMEAMKAADVQKKWEDSSWGRKLLVKQRRASLNDFDRFKLMLAKIKR 120
           K+ DI R     E+     AA V + +  S WG+KL  +++RA+L+DF RFK+M+A++K+
Sbjct: 61  KVDDIARGAPVAEVKSKYTAAKVDETFAASGWGKKLAKREKRAALDDFGRFKVMVARMKK 120

Query: 121 AGLVRQELAKLK 130
           +  +  ELAKLK
Sbjct: 121 SKAINAELAKLK 132

[Close]
BLAST of CsGy3G011960 vs. NCBI nr
Match: XP_004134055.1 (60S ribosomal protein L14-2 [Cucumis sativus])

HSP 1 Score: 250 bits (638), Expect = 2.53e-83
Identity = 133/133 (100.00%), Postives = 133/133 (100.00%), Query Frame = 0 

Query: 1   MPFKRYVEIGRVALVNYGEDYGKLVVIVDVIDQNRALVDAPDMVRSQMNFKRLSLTDIKI 60
           MPFKRYVEIGRVALVNYGEDYGKLVVIVDVIDQNRALVDAPDMVRSQMNFKRLSLTDIKI
Sbjct: 1   MPFKRYVEIGRVALVNYGEDYGKLVVIVDVIDQNRALVDAPDMVRSQMNFKRLSLTDIKI 60

Query: 61  DIKRVPRKKELMEAMKAADVQKKWEDSSWGRKLLVKQRRASLNDFDRFKLMLAKIKRAGL 120
           DIKRVPRKKELMEAMKAADVQKKWEDSSWGRKLLVKQRRASLNDFDRFKLMLAKIKRAGL
Sbjct: 61  DIKRVPRKKELMEAMKAADVQKKWEDSSWGRKLLVKQRRASLNDFDRFKLMLAKIKRAGL 120

Query: 121 VRQELAKLKKSAS 133
           VRQELAKLKKSAS
Sbjct: 121 VRQELAKLKKSAS 133

[Close]
BLAST of CsGy3G011960 vs. NCBI nr
Match: XP_008438503.1 (PREDICTED: probable 60S ribosomal protein L14 [Cucumis melo] >KAA0049239.1 putative 60S ribosomal protein L14 [Cucumis melo var. makuwa] >TYK17319.1 putative 60S ribosomal protein L14 [Cucumis melo var. makuwa])

HSP 1 Score: 248 bits (634), Expect = 1.03e-82
Identity = 132/133 (99.25%), Postives = 133/133 (100.00%), Query Frame = 0 

Query: 1   MPFKRYVEIGRVALVNYGEDYGKLVVIVDVIDQNRALVDAPDMVRSQMNFKRLSLTDIKI 60
           MPFKRYVEIGRVALVNYGEDYGKLVVIVDVIDQNRALVDAPDMVRSQ+NFKRLSLTDIKI
Sbjct: 1   MPFKRYVEIGRVALVNYGEDYGKLVVIVDVIDQNRALVDAPDMVRSQINFKRLSLTDIKI 60

Query: 61  DIKRVPRKKELMEAMKAADVQKKWEDSSWGRKLLVKQRRASLNDFDRFKLMLAKIKRAGL 120
           DIKRVPRKKELMEAMKAADVQKKWEDSSWGRKLLVKQRRASLNDFDRFKLMLAKIKRAGL
Sbjct: 61  DIKRVPRKKELMEAMKAADVQKKWEDSSWGRKLLVKQRRASLNDFDRFKLMLAKIKRAGL 120

Query: 121 VRQELAKLKKSAS 133
           VRQELAKLKKSAS
Sbjct: 121 VRQELAKLKKSAS 133

[Close]
BLAST of CsGy3G011960 vs. NCBI nr
Match: XP_022947422.1 (60S ribosomal protein L14-2-like [Cucurbita moschata] >XP_022974503.1 60S ribosomal protein L14-2-like [Cucurbita maxima] >XP_023521269.1 60S ribosomal protein L14-2-like [Cucurbita pepo subsp. pepo] >XP_023521270.1 60S ribosomal protein L14-2-like [Cucurbita pepo subsp. pepo] >XP_023539135.1 60S ribosomal protein L14-2-like [Cucurbita pepo subsp. pepo] >KAG6597356.1 60S ribosomal protein L14-2, partial [Cucurbita argyrosperma subsp. sororia] >KAG7028820.1 60S ribosomal protein L14-2 [Cucurbita argyrosperma subsp. argyrosperma] >KAG6597357.1 60S ribosomal protein L14-2, partial [Cucurbita argyrosperma subsp. sororia] >KAG7028821.1 60S ribosomal protein L14-2, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 245 bits (625), Expect = 2.43e-81
Identity = 130/133 (97.74%), Postives = 132/133 (99.25%), Query Frame = 0 

Query: 1   MPFKRYVEIGRVALVNYGEDYGKLVVIVDVIDQNRALVDAPDMVRSQMNFKRLSLTDIKI 60
           MPFKRYVEIGRVALVNYGEDYGKLVVIVDVIDQNRALVDAPDMVRSQMNFKRLSLTDIKI
Sbjct: 1   MPFKRYVEIGRVALVNYGEDYGKLVVIVDVIDQNRALVDAPDMVRSQMNFKRLSLTDIKI 60

Query: 61  DIKRVPRKKELMEAMKAADVQKKWEDSSWGRKLLVKQRRASLNDFDRFKLMLAKIKRAGL 120
           DIKRVPRKKEL+EAMKAADVQKKWEDSSWGRKLLVK+RRASLNDFDRFKLMLAKIKRAGL
Sbjct: 61  DIKRVPRKKELIEAMKAADVQKKWEDSSWGRKLLVKKRRASLNDFDRFKLMLAKIKRAGL 120

Query: 121 VRQELAKLKKSAS 133
           VRQELAKLKKS S
Sbjct: 121 VRQELAKLKKSES 133

[Close]
BLAST of CsGy3G011960 vs. NCBI nr
Match: XP_038880451.1 (60S ribosomal protein L14-2-like [Benincasa hispida])

HSP 1 Score: 244 bits (623), Expect = 4.90e-81
Identity = 130/133 (97.74%), Postives = 131/133 (98.50%), Query Frame = 0 

Query: 1   MPFKRYVEIGRVALVNYGEDYGKLVVIVDVIDQNRALVDAPDMVRSQMNFKRLSLTDIKI 60
           MPFKRYVEIGRVALVNYGEDYGKLVVIVDVIDQNRALVDAPDMVRSQMNFKRLSLTDIKI
Sbjct: 1   MPFKRYVEIGRVALVNYGEDYGKLVVIVDVIDQNRALVDAPDMVRSQMNFKRLSLTDIKI 60

Query: 61  DIKRVPRKKELMEAMKAADVQKKWEDSSWGRKLLVKQRRASLNDFDRFKLMLAKIKRAGL 120
           DIKRVPRKKELMEAM AADVQKKWEDSSWGRKLLVK+RRASLNDFDRFKLMLAKIKRAGL
Sbjct: 61  DIKRVPRKKELMEAMTAADVQKKWEDSSWGRKLLVKKRRASLNDFDRFKLMLAKIKRAGL 120

Query: 121 VRQELAKLKKSAS 133
           VRQELAKLKKS S
Sbjct: 121 VRQELAKLKKSES 133

[Close]
BLAST of CsGy3G011960 vs. NCBI nr
Match: XP_038881110.1 (60S ribosomal protein L14-2-like [Benincasa hispida])

HSP 1 Score: 244 bits (622), Expect = 6.96e-81
Identity = 129/133 (96.99%), Postives = 132/133 (99.25%), Query Frame = 0 

Query: 1   MPFKRYVEIGRVALVNYGEDYGKLVVIVDVIDQNRALVDAPDMVRSQMNFKRLSLTDIKI 60
           MPFKRYVEIGRVALVNYGEDYGKLVVIVDVIDQNRALVDAPDMVRSQMNFKRLSLTDIKI
Sbjct: 1   MPFKRYVEIGRVALVNYGEDYGKLVVIVDVIDQNRALVDAPDMVRSQMNFKRLSLTDIKI 60

Query: 61  DIKRVPRKKELMEAMKAADVQKKWEDSSWGRKLLVKQRRASLNDFDRFKLMLAKIKRAGL 120
           DIKRVPRKKEL+EAMKAADVQKKWEDSSWGRKLLV++RRASLNDFDRFKLMLAKIKRAGL
Sbjct: 61  DIKRVPRKKELIEAMKAADVQKKWEDSSWGRKLLVRKRRASLNDFDRFKLMLAKIKRAGL 120

Query: 121 VRQELAKLKKSAS 133
           VRQELAKLKKS S
Sbjct: 121 VRQELAKLKKSES 133

[Close]
BLAST of CsGy3G011960 vs. ExPASy TrEMBL
Match: A0A0A0L4D3 (Ribosomal_L14e domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G134930 PE=3 SV=1)

HSP 1 Score: 250 bits (638), Expect = 1.22e-83
Identity = 133/133 (100.00%), Postives = 133/133 (100.00%), Query Frame = 0 

Query: 1   MPFKRYVEIGRVALVNYGEDYGKLVVIVDVIDQNRALVDAPDMVRSQMNFKRLSLTDIKI 60
           MPFKRYVEIGRVALVNYGEDYGKLVVIVDVIDQNRALVDAPDMVRSQMNFKRLSLTDIKI
Sbjct: 1   MPFKRYVEIGRVALVNYGEDYGKLVVIVDVIDQNRALVDAPDMVRSQMNFKRLSLTDIKI 60

Query: 61  DIKRVPRKKELMEAMKAADVQKKWEDSSWGRKLLVKQRRASLNDFDRFKLMLAKIKRAGL 120
           DIKRVPRKKELMEAMKAADVQKKWEDSSWGRKLLVKQRRASLNDFDRFKLMLAKIKRAGL
Sbjct: 61  DIKRVPRKKELMEAMKAADVQKKWEDSSWGRKLLVKQRRASLNDFDRFKLMLAKIKRAGL 120

Query: 121 VRQELAKLKKSAS 133
           VRQELAKLKKSAS
Sbjct: 121 VRQELAKLKKSAS 133

[Close]
BLAST of CsGy3G011960 vs. ExPASy TrEMBL
Match: A0A5D3D3E0 (Putative 60S ribosomal protein L14 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold434G001740 PE=3 SV=1)

HSP 1 Score: 248 bits (634), Expect = 4.99e-83
Identity = 132/133 (99.25%), Postives = 133/133 (100.00%), Query Frame = 0 

Query: 1   MPFKRYVEIGRVALVNYGEDYGKLVVIVDVIDQNRALVDAPDMVRSQMNFKRLSLTDIKI 60
           MPFKRYVEIGRVALVNYGEDYGKLVVIVDVIDQNRALVDAPDMVRSQ+NFKRLSLTDIKI
Sbjct: 1   MPFKRYVEIGRVALVNYGEDYGKLVVIVDVIDQNRALVDAPDMVRSQINFKRLSLTDIKI 60

Query: 61  DIKRVPRKKELMEAMKAADVQKKWEDSSWGRKLLVKQRRASLNDFDRFKLMLAKIKRAGL 120
           DIKRVPRKKELMEAMKAADVQKKWEDSSWGRKLLVKQRRASLNDFDRFKLMLAKIKRAGL
Sbjct: 61  DIKRVPRKKELMEAMKAADVQKKWEDSSWGRKLLVKQRRASLNDFDRFKLMLAKIKRAGL 120

Query: 121 VRQELAKLKKSAS 133
           VRQELAKLKKSAS
Sbjct: 121 VRQELAKLKKSAS 133

[Close]
BLAST of CsGy3G011960 vs. ExPASy TrEMBL
Match: A0A1S3AX66 (probable 60S ribosomal protein L14 OS=Cucumis melo OX=3656 GN=LOC103483582 PE=3 SV=1)

HSP 1 Score: 248 bits (634), Expect = 4.99e-83
Identity = 132/133 (99.25%), Postives = 133/133 (100.00%), Query Frame = 0 

Query: 1   MPFKRYVEIGRVALVNYGEDYGKLVVIVDVIDQNRALVDAPDMVRSQMNFKRLSLTDIKI 60
           MPFKRYVEIGRVALVNYGEDYGKLVVIVDVIDQNRALVDAPDMVRSQ+NFKRLSLTDIKI
Sbjct: 1   MPFKRYVEIGRVALVNYGEDYGKLVVIVDVIDQNRALVDAPDMVRSQINFKRLSLTDIKI 60

Query: 61  DIKRVPRKKELMEAMKAADVQKKWEDSSWGRKLLVKQRRASLNDFDRFKLMLAKIKRAGL 120
           DIKRVPRKKELMEAMKAADVQKKWEDSSWGRKLLVKQRRASLNDFDRFKLMLAKIKRAGL
Sbjct: 61  DIKRVPRKKELMEAMKAADVQKKWEDSSWGRKLLVKQRRASLNDFDRFKLMLAKIKRAGL 120

Query: 121 VRQELAKLKKSAS 133
           VRQELAKLKKSAS
Sbjct: 121 VRQELAKLKKSAS 133

[Close]
BLAST of CsGy3G011960 vs. ExPASy TrEMBL
Match: A0A6J1IGF2 (60S ribosomal protein L14-2-like OS=Cucurbita maxima OX=3661 GN=LOC111473179 PE=3 SV=1)

HSP 1 Score: 245 bits (625), Expect = 1.18e-81
Identity = 130/133 (97.74%), Postives = 132/133 (99.25%), Query Frame = 0 

Query: 1   MPFKRYVEIGRVALVNYGEDYGKLVVIVDVIDQNRALVDAPDMVRSQMNFKRLSLTDIKI 60
           MPFKRYVEIGRVALVNYGEDYGKLVVIVDVIDQNRALVDAPDMVRSQMNFKRLSLTDIKI
Sbjct: 1   MPFKRYVEIGRVALVNYGEDYGKLVVIVDVIDQNRALVDAPDMVRSQMNFKRLSLTDIKI 60

Query: 61  DIKRVPRKKELMEAMKAADVQKKWEDSSWGRKLLVKQRRASLNDFDRFKLMLAKIKRAGL 120
           DIKRVPRKKEL+EAMKAADVQKKWEDSSWGRKLLVK+RRASLNDFDRFKLMLAKIKRAGL
Sbjct: 61  DIKRVPRKKELIEAMKAADVQKKWEDSSWGRKLLVKKRRASLNDFDRFKLMLAKIKRAGL 120

Query: 121 VRQELAKLKKSAS 133
           VRQELAKLKKS S
Sbjct: 121 VRQELAKLKKSES 133

[Close]
BLAST of CsGy3G011960 vs. ExPASy TrEMBL
Match: A0A6J1G6E8 (60S ribosomal protein L14-2-like OS=Cucurbita moschata OX=3662 GN=LOC111451284 PE=3 SV=1)

HSP 1 Score: 245 bits (625), Expect = 1.18e-81
Identity = 130/133 (97.74%), Postives = 132/133 (99.25%), Query Frame = 0 

Query: 1   MPFKRYVEIGRVALVNYGEDYGKLVVIVDVIDQNRALVDAPDMVRSQMNFKRLSLTDIKI 60
           MPFKRYVEIGRVALVNYGEDYGKLVVIVDVIDQNRALVDAPDMVRSQMNFKRLSLTDIKI
Sbjct: 1   MPFKRYVEIGRVALVNYGEDYGKLVVIVDVIDQNRALVDAPDMVRSQMNFKRLSLTDIKI 60

Query: 61  DIKRVPRKKELMEAMKAADVQKKWEDSSWGRKLLVKQRRASLNDFDRFKLMLAKIKRAGL 120
           DIKRVPRKKEL+EAMKAADVQKKWEDSSWGRKLLVK+RRASLNDFDRFKLMLAKIKRAGL
Sbjct: 61  DIKRVPRKKELIEAMKAADVQKKWEDSSWGRKLLVKKRRASLNDFDRFKLMLAKIKRAGL 120

Query: 121 VRQELAKLKKSAS 133
           VRQELAKLKKS S
Sbjct: 121 VRQELAKLKKSES 133

[Close]
BLAST of CsGy3G011960 vs. TAIR 10
Match: AT4G27090.1 (Ribosomal protein L14 )

HSP 1 Score: 210.7 bits (535), Expect = 7.3e-55
Identity = 108/130 (83.08%), Postives = 121/130 (93.08%), Query Frame = 0 

Query: 1   MPFKRYVEIGRVALVNYGEDYGKLVVIVDVIDQNRALVDAPDMVRSQMNFKRLSLTDIKI 60
           M FKRYVEIGRVALVNYGED+GKLVVIVDV+DQNRALVDAPDM R QMNFKRLSLTDI I
Sbjct: 1   MGFKRYVEIGRVALVNYGEDHGKLVVIVDVVDQNRALVDAPDMERIQMNFKRLSLTDIVI 60

Query: 61  DIKRVPRKKELMEAMKAADVQKKWEDSSWGRKLLVKQRRASLNDFDRFKLMLAKIKRAGL 120
           DI RVP+KK L+EAM+ ADV+ KWE SSWGRKL+V++RRA+LNDFDRFK+MLAKIK+AG+
Sbjct: 61  DINRVPKKKALIEAMEKADVKNKWEKSSWGRKLIVQKRRANLNDFDRFKIMLAKIKKAGV 120

Query: 121 VRQELAKLKK 131
           VRQELAKLKK
Sbjct: 121 VRQELAKLKK 130

[Close]
BLAST of CsGy3G011960 vs. TAIR 10
Match: AT2G20450.1 (Ribosomal protein L14 )

HSP 1 Score: 208.8 bits (530), Expect = 2.8e-54
Identity = 107/130 (82.31%), Postives = 120/130 (92.31%), Query Frame = 0 

Query: 1   MPFKRYVEIGRVALVNYGEDYGKLVVIVDVIDQNRALVDAPDMVRSQMNFKRLSLTDIKI 60
           M FKR+VEIGRVALVNYGEDYGKLVVIVDV+DQNRALVDAPDM R QMN KRLSLTDI I
Sbjct: 1   MGFKRFVEIGRVALVNYGEDYGKLVVIVDVVDQNRALVDAPDMERIQMNLKRLSLTDIVI 60

Query: 61  DIKRVPRKKELMEAMKAADVQKKWEDSSWGRKLLVKQRRASLNDFDRFKLMLAKIKRAGL 120
           DI RVP+KK L+EAM+ ADV+ KWE SSWGRKL+V++RRA+LNDFDRFK+MLAKIKRAG+
Sbjct: 61  DINRVPKKKVLIEAMEKADVKNKWEKSSWGRKLIVQKRRAALNDFDRFKIMLAKIKRAGI 120

Query: 121 VRQELAKLKK 131
           VRQELAKLK+
Sbjct: 121 VRQELAKLKR 130

The following BLAST results are available for this feature:
BLAST of CsGy3G011960 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q9T0431.0e-5383.0860S ribosomal protein L14-2 OS=Arabidopsis thaliana OX=3702 GN=RPL14B PE=1 SV=1[more]
Q9SIM43.9e-5382.3160S ribosomal protein L14-1 OS=Arabidopsis thaliana OX=3702 GN=RPL14A PE=2 SV=1[more]
P558445.1e-5378.95Probable 60S ribosomal protein L14 OS=Pisum sativum OX=3888 PE=2 SV=1[more]
O461605.3e-2648.8760S ribosomal protein L14 OS=Lumbricus rubellus OX=35632 GN=RPL14 PE=3 SV=1[more]
Q7XYA71.5e-2550.0060S ribosomal protein L14 OS=Griffithsia japonica OX=83288 GN=RPL14 PE=2 SV=1[more]
BLAST of CsGy3G011960 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_004134055.12.53e-83100.0060S ribosomal protein L14-2 [Cucumis sativus][more]
XP_008438503.11.03e-8299.25PREDICTED: probable 60S ribosomal protein L14 [Cucumis melo] >KAA0049239.1 putat... [more]
XP_022947422.12.43e-8197.7460S ribosomal protein L14-2-like [Cucurbita moschata] >XP_022974503.1 60S riboso... [more]
XP_038880451.14.90e-8197.7460S ribosomal protein L14-2-like [Benincasa hispida][more]
XP_038881110.16.96e-8196.9960S ribosomal protein L14-2-like [Benincasa hispida][more]
BLAST of CsGy3G011960 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0L4D31.22e-83100.00Ribosomal_L14e domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G134... [more]
A0A5D3D3E04.99e-8399.25Putative 60S ribosomal protein L14 OS=Cucumis melo var. makuwa OX=1194695 GN=E56... [more]
A0A1S3AX664.99e-8399.25probable 60S ribosomal protein L14 OS=Cucumis melo OX=3656 GN=LOC103483582 PE=3 ... [more]
A0A6J1IGF21.18e-8197.7460S ribosomal protein L14-2-like OS=Cucurbita maxima OX=3661 GN=LOC111473179 PE=... [more]
A0A6J1G6E81.18e-8197.7460S ribosomal protein L14-2-like OS=Cucurbita moschata OX=3662 GN=LOC111451284 P... [more]
BLAST of CsGy3G011960 vs. TAIR 10
Match NameE-valueIdentityDescription
AT4G27090.17.3e-5583.08Ribosomal protein L14 [more]
AT2G20450.12.8e-5482.31Ribosomal protein L14 [more]
InterPro
Analysis Name: InterPro Annotations of Cucumber (Gy14) v2.1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR014722Ribosomal protein L2, domain 2GENE3D2.30.30.30coord: 1..84
e-value: 3.3E-38
score: 131.7
NoneNo IPR availableGENE3D6.10.250.2270coord: 92..127
e-value: 5.3E-12
score: 47.2
NoneNo IPR availablePANTHERPTHR11127:SF11RIBOSOMAL PROTEIN L14, PUTATIVE-RELATEDcoord: 1..132
IPR002784Ribosomal protein L14e domainPFAMPF01929Ribosomal_L14ecoord: 45..117
e-value: 7.4E-26
score: 90.5
IPR039660Ribosomal protein L14PANTHERPTHR1112760S RIBOSOMAL PROTEIN L14coord: 1..132
IPR041985Ribosomal protein L14, KOW motifCDDcd06088KOW_RPL14coord: 7..79
e-value: 8.78133E-22
score: 80.5974
IPR008991Translation protein SH3-like domain superfamilySUPERFAMILY50104Translation proteins SH3-like domaincoord: 5..93

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsGy3G011960.1CsGy3G011960.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0042273 ribosomal large subunit biogenesis
biological_process GO:0006412 translation
cellular_component GO:0022625 cytosolic large ribosomal subunit
cellular_component GO:0005840 ribosome
molecular_function GO:0003723 RNA binding
molecular_function GO:0003735 structural constituent of ribosome