CsGy3G010537 (gene) Cucumber (Gy14) v2.1

Overview


Name	CsGy3G010537
Type	gene
Organism	Cucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
Description	Unknown protein
Location	Gy14Chr3: 8310918 .. 8311145 (+)
RNA-Seq Expression	CsGy3G010537
Synteny	CsGy3G010537

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGATAGCATAATGGGAGATCCAAATGAAAATCGACAAAACGTGATTCTTATTTTTCTTCATTTGTTTCGTCATCTGCTTGTGAGATTACCGAATCAACATGGTTCTTTCTTCCTCCCTCATTTCTGGAATCAAAGATCGAAACTAAAGCGTGAATCAGTGCAAGATCCAACAGCCAACAGCAAGGAGCGAGAAGAAGAATTTGAAGGGGGAGTGAAGCAACTTTGA

mRNA sequence

ATGGATAGCATAATGGGAGATCCAAATGAAAATCGACAAAACGTGATTCTTATTTTTCTTCATTTGTTTCGTCATCTGCTTGTGAGATTACCGAATCAACATGGTTCTTTCTTCCTCCCTCATTTCTGGAATCAAAGATCGAAACTAAAGCGTGAATCAGTGCAAGATCCAACAGCCAACAGCAAGGAGCGAGAAGAAGAATTTGAAGGGGGAGTGAAGCAACTTTGA

Coding sequence (CDS)

ATGGATAGCATAATGGGAGATCCAAATGAAAATCGACAAAACGTGATTCTTATTTTTCTTCATTTGTTTCGTCATCTGCTTGTGAGATTACCGAATCAACATGGTTCTTTCTTCCTCCCTCATTTCTGGAATCAAAGATCGAAACTAAAGCGTGAATCAGTGCAAGATCCAACAGCCAACAGCAAGGAGCGAGAAGAAGAATTTGAAGGGGGAGTGAAGCAACTTTGA

Protein sequence

MDSIMGDPNENRQNVILIFLHLFRHLLVRLPNQHGSFFLPHFWNQRSKLKRESVQDPTANSKEREEEFEGGVKQL*

Homology

[Close]

BLAST of CsGy3G010537 vs. NCBI nr
Match: KGN56694.1 (hypothetical protein Csa_010969 [Cucumis sativus])

HSP 1 Score: 157 bits (398), Expect = 1.51e-48
Identity = 75/75 (100.00%), Postives = 75/75 (100.00%), Query Frame = 0


Query: 1  MDSIMGDPNENRQNVILIFLHLFRHLLVRLPNQHGSFFLPHFWNQRSKLKRESVQDPTAN 60
          MDSIMGDPNENRQNVILIFLHLFRHLLVRLPNQHGSFFLPHFWNQRSKLKRESVQDPTAN
Sbjct: 1  MDSIMGDPNENRQNVILIFLHLFRHLLVRLPNQHGSFFLPHFWNQRSKLKRESVQDPTAN 60

Query: 61 SKEREEEFEGGVKQL 75
          SKEREEEFEGGVKQL
Sbjct: 61 SKEREEEFEGGVKQL 75

[Close]

BLAST of CsGy3G010537 vs. ExPASy TrEMBL
Match: A0A0A0L6N2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G129510 PE=4 SV=1)

HSP 1 Score: 157 bits (398), Expect = 7.31e-49
Identity = 75/75 (100.00%), Postives = 75/75 (100.00%), Query Frame = 0


Query: 1  MDSIMGDPNENRQNVILIFLHLFRHLLVRLPNQHGSFFLPHFWNQRSKLKRESVQDPTAN 60
          MDSIMGDPNENRQNVILIFLHLFRHLLVRLPNQHGSFFLPHFWNQRSKLKRESVQDPTAN
Sbjct: 1  MDSIMGDPNENRQNVILIFLHLFRHLLVRLPNQHGSFFLPHFWNQRSKLKRESVQDPTAN 60

Query: 61 SKEREEEFEGGVKQL 75
          SKEREEEFEGGVKQL
Sbjct: 61 SKEREEEFEGGVKQL 75

The following BLAST results are available for this feature:

BLAST of CsGy3G010537 vs.


Match Name	E-value	Identity	Description

BLAST of CsGy3G010537 vs. NCBI nr


Match Name	E-value	Identity	Description
KGN56694.1	1.51e-48	100.00	hypothetical protein Csa_010969 [Cucumis sativus]	[more]

BLAST of CsGy3G010537 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L6N2	7.31e-49	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G129510 PE=4 SV=1	[more]

BLAST of CsGy3G010537 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Cucumber (Gy14) v2.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 49..75

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsGy3G010537.1	CsGy3G010537.1	mRNA