CsGy3G006160 (gene) Cucumber (Gy14) v2.1

Overview
NameCsGy3G006160
Typegene
OrganismCucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
DescriptionPlant protein of unknown function (DUF247)
LocationGy14Chr3: 5221518 .. 5222297 (+)
RNA-Seq ExpressionCsGy3G006160
SyntenyCsGy3G006160
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCAACATCTATCGAAAGTGCTATGCGAGATGAATCCTAAGACTTATGTTCCTCAACTAATTTCCATTGGCCCTTTTCACCATGGCACTCCAAAAGATTTGATAGCCAATGAAAAATATAAGCTTCATGGTTTTATTAACTTTCTACGTCGTATCAATATTAAATCAACAGTGGAGGGTGGCATTTCTGAAACTGCCAGATCATTGAAGGACCTGCTGAAAACTGGAACATTGAAAGTTCTCGTGGAAAAAGCTCATGATTGGGTGAAAGAAGCTTTGAATTGCTATGCAACACCCATAAACATGGAAGAAAAGGATTTTATTATAATGATGGTTGTGGATGCTTGTTTCATAGTGGAGTTTTTTATACTAAAAGTTGATGAAAGCCATCCAATTTGTAAGTTCGATCTAATTCAAGAGAATGTAGATATTTCATTCCACGGAGGCATAGAGGTAGATATAACTGATGACATGATCAAGTTGGAAAATCAAGTTCCTTTTTTTCTTCTTGAACGCCTATTTGAGGAAATACCCAAAGAAAATGTCCCCATCCGCTCCAAATTTAGAGAAGAAAAAGAATTCCCCATCTCTTCTAGAGATGATAAAAATGTCCCCGTCCGCTCCAAATTTAGAGAAGAAAAAGAACTCCCCATCTCTAGAGATGATGAAAATGTCCCTATCTCCCTTAAAGATCTTGCACATTGGGCTCTAAAGTCTAGGTTGGTGAGGGACTGTGAGATCGATCTGAATAAAAACCAGACCACTTGGTTGATTTCTTAA

mRNA sequence

ATGCAACATCTATCGAAAGTGCTATGCGAGATGAATCCTAAGACTTATGTTCCTCAACTAATTTCCATTGGCCCTTTTCACCATGGCACTCCAAAAGATTTGATAGCCAATGAAAAATATAAGCTTCATGGTTTTATTAACTTTCTACGTCGTATCAATATTAAATCAACAGTGGAGGGTGGCATTTCTGAAACTGCCAGATCATTGAAGGACCTGCTGAAAACTGGAACATTGAAAGTTCTCGTGGAAAAAGCTCATGATTGGGTGAAAGAAGCTTTGAATTGCTATGCAACACCCATAAACATGGAAGAAAAGGATTTTATTATAATGATGGTTGTGGATGCTTGTTTCATAGTGGAGTTTTTTATACTAAAAGTTGATGAAAGCCATCCAATTTGTAAGTTCGATCTAATTCAAGAGAATGTAGATATTTCATTCCACGGAGGCATAGAGGTAGATATAACTGATGACATGATCAAGTTGGAAAATCAAGTTCCTTTTTTTCTTCTTGAACGCCTATTTGAGGAAATACCCAAAGAAAATGTCCCCATCCGCTCCAAATTTAGAGAAGAAAAAGAATTCCCCATCTCTTCTAGAGATGATAAAAATGTCCCCGTCCGCTCCAAATTTAGAGAAGAAAAAGAACTCCCCATCTCTAGAGATGATGAAAATGTCCCTATCTCCCTTAAAGATCTTGCACATTGGGCTCTAAAGTCTAGGTTGGTGAGGGACTGTGAGATCGATCTGAATAAAAACCAGACCACTTGGTTGATTTCTTAA

Coding sequence (CDS)

ATGCAACATCTATCGAAAGTGCTATGCGAGATGAATCCTAAGACTTATGTTCCTCAACTAATTTCCATTGGCCCTTTTCACCATGGCACTCCAAAAGATTTGATAGCCAATGAAAAATATAAGCTTCATGGTTTTATTAACTTTCTACGTCGTATCAATATTAAATCAACAGTGGAGGGTGGCATTTCTGAAACTGCCAGATCATTGAAGGACCTGCTGAAAACTGGAACATTGAAAGTTCTCGTGGAAAAAGCTCATGATTGGGTGAAAGAAGCTTTGAATTGCTATGCAACACCCATAAACATGGAAGAAAAGGATTTTATTATAATGATGGTTGTGGATGCTTGTTTCATAGTGGAGTTTTTTATACTAAAAGTTGATGAAAGCCATCCAATTTGTAAGTTCGATCTAATTCAAGAGAATGTAGATATTTCATTCCACGGAGGCATAGAGGTAGATATAACTGATGACATGATCAAGTTGGAAAATCAAGTTCCTTTTTTTCTTCTTGAACGCCTATTTGAGGAAATACCCAAAGAAAATGTCCCCATCCGCTCCAAATTTAGAGAAGAAAAAGAATTCCCCATCTCTTCTAGAGATGATAAAAATGTCCCCGTCCGCTCCAAATTTAGAGAAGAAAAAGAACTCCCCATCTCTAGAGATGATGAAAATGTCCCTATCTCCCTTAAAGATCTTGCACATTGGGCTCTAAAGTCTAGGTTGGTGAGGGACTGTGAGATCGATCTGAATAAAAACCAGACCACTTGGTTGATTTCTTAA

Protein sequence

MQHLSKVLCEMNPKTYVPQLISIGPFHHGTPKDLIANEKYKLHGFINFLRRINIKSTVEGGISETARSLKDLLKTGTLKVLVEKAHDWVKEALNCYATPINMEEKDFIIMMVVDACFIVEFFILKVDESHPICKFDLIQENVDISFHGGIEVDITDDMIKLENQVPFFLLERLFEEIPKENVPIRSKFREEKEFPISSRDDKNVPVRSKFREEKELPISRDDENVPISLKDLAHWALKSRLVRDCEIDLNKNQTTWLIS*
Homology
BLAST of CsGy3G006160 vs. ExPASy Swiss-Prot
Match: Q9SD53 (UPF0481 protein At3g47200 OS=Arabidopsis thaliana OX=3702 GN=At3g47200 PE=2 SV=1)

HSP 1 Score: 55.5 bits (132), Expect = 1.1e-06
Identity = 45/169 (26.63%), Postives = 76/169 (44.97%), Query Frame = 0

Query: 11  MNPKTYVPQLISIGPFHHGTPKDLIANEKYKLHGFINFLRRINIKSTVEGGISETARSLK 70
           +NPK Y P+++SIGP+H+G  K L   +++K      FL     K   E  + +    L+
Sbjct: 58  LNPKAYKPKVVSIGPYHYG-EKHLQMIQQHKPRLLQLFLDEAKKKDVEENVLVKAVVDLE 117

Query: 71  DLLKTGTLKVLVEKAHDWVKEALNCYATPINMEEKDFIIMMVVDACFIVEFFILKVDESH 130
           D ++    + L +  H                   D + MMV+D CFI+  F+       
Sbjct: 118 DKIRKSYSEEL-KTGH-------------------DLMFMMVLDGCFILMVFL------- 177

Query: 131 PICKFDLIQENVDISFHGGIEV-----DITDDMIKLENQVPFFLLERLF 175
                 ++  N+++S      +      I  D++ LENQVPFF+L+ L+
Sbjct: 178 ------IMSGNIELSEDPIFSIPWLLSSIQSDLLLLENQVPFFVLQTLY 192

BLAST of CsGy3G006160 vs. NCBI nr
Match: XP_031739483.1 (UPF0481 protein At3g47200-like [Cucumis sativus] >XP_031739484.1 UPF0481 protein At3g47200-like [Cucumis sativus] >XP_031739485.1 UPF0481 protein At3g47200-like [Cucumis sativus] >KGN56228.1 hypothetical protein Csa_011586 [Cucumis sativus])

HSP 1 Score: 521 bits (1341), Expect = 2.39e-186
Identity = 259/259 (100.00%), Postives = 259/259 (100.00%), Query Frame = 0

Query: 1   MQHLSKVLCEMNPKTYVPQLISIGPFHHGTPKDLIANEKYKLHGFINFLRRINIKSTVEG 60
           MQHLSKVLCEMNPKTYVPQLISIGPFHHGTPKDLIANEKYKLHGFINFLRRINIKSTVEG
Sbjct: 1   MQHLSKVLCEMNPKTYVPQLISIGPFHHGTPKDLIANEKYKLHGFINFLRRINIKSTVEG 60

Query: 61  GISETARSLKDLLKTGTLKVLVEKAHDWVKEALNCYATPINMEEKDFIIMMVVDACFIVE 120
           GISETARSLKDLLKTGTLKVLVEKAHDWVKEALNCYATPINMEEKDFIIMMVVDACFIVE
Sbjct: 61  GISETARSLKDLLKTGTLKVLVEKAHDWVKEALNCYATPINMEEKDFIIMMVVDACFIVE 120

Query: 121 FFILKVDESHPICKFDLIQENVDISFHGGIEVDITDDMIKLENQVPFFLLERLFEEIPKE 180
           FFILKVDESHPICKFDLIQENVDISFHGGIEVDITDDMIKLENQVPFFLLERLFEEIPKE
Sbjct: 121 FFILKVDESHPICKFDLIQENVDISFHGGIEVDITDDMIKLENQVPFFLLERLFEEIPKE 180

Query: 181 NVPIRSKFREEKEFPISSRDDKNVPVRSKFREEKELPISRDDENVPISLKDLAHWALKSR 240
           NVPIRSKFREEKEFPISSRDDKNVPVRSKFREEKELPISRDDENVPISLKDLAHWALKSR
Sbjct: 181 NVPIRSKFREEKEFPISSRDDKNVPVRSKFREEKELPISRDDENVPISLKDLAHWALKSR 240

Query: 241 LVRDCEIDLNKNQTTWLIS 259
           LVRDCEIDLNKNQTTWLIS
Sbjct: 241 LVRDCEIDLNKNQTTWLIS 259

BLAST of CsGy3G006160 vs. NCBI nr
Match: XP_038889346.1 (UPF0481 protein At3g47200-like [Benincasa hispida])

HSP 1 Score: 248 bits (634), Expect = 2.49e-76
Identity = 138/235 (58.72%), Postives = 163/235 (69.36%), Query Frame = 0

Query: 4   LSKVLCEMNPKTYVPQLISIGPFHHGTPKDLIANEKYKLHGFINFLRRIN---IKSTVEG 63
           ++K L EMNPK Y PQLISIGP HHGT KDLIANE+YKLHGF+NFLRR+N   I+S    
Sbjct: 46  VTKALREMNPKAYAPQLISIGPLHHGTRKDLIANEQYKLHGFMNFLRRMNNNMIESMDHV 105

Query: 64  GISETARSLKDLLKTGTLKVLVEKAHDWVKEALNCYATPINMEEKDFIIMMVVDACFIVE 123
           G  +T           TL VLVEKAH WVKEA NCYATPI M+E++F+ MM+VDACFIVE
Sbjct: 106 GFPQTR----------TLNVLVEKAHCWVKEARNCYATPIKMKEEEFVTMMLVDACFIVE 165

Query: 124 FFILKVDESHPICKFDLIQENVDISFHGGIEVDITDDMIKLENQVPFFLLERLFEEIPKE 183
           FFILK D+ HP CKF  IQENVDISF+ GIE+DI DD+IKLENQVPFFLL  LF+ IPK 
Sbjct: 166 FFILKFDDCHPNCKFVQIQENVDISFYEGIEMDIPDDLIKLENQVPFFLLRSLFDLIPKH 225

Query: 184 NVPIRSKFREEKEFPISSRDDKNVPVRS--KF---REEKELPISRDDENVPISLK 230
           NVP+ S F+          DDKN       KF   RE  E+ ++ + E++P   K
Sbjct: 226 NVPLISSFK----------DDKNYLPHCTLKFGLVRESHEIDLNEEPEHLPTKNK 260

BLAST of CsGy3G006160 vs. NCBI nr
Match: XP_038890800.1 (UPF0481 protein At3g47200-like [Benincasa hispida])

HSP 1 Score: 230 bits (586), Expect = 7.57e-69
Identity = 132/249 (53.01%), Postives = 153/249 (61.45%), Query Frame = 0

Query: 4   LSKVLCEMNPKTYVPQLISIGPFHHGTPKDLIANEKYKLHGFINFLRRINIKSTVEGGIS 63
           +SK LCE+N K Y PQLISIGP H GT KDLIANE YKL GFINFLRRIN         +
Sbjct: 56  ISKELCEVNRKAYTPQLISIGPIHCGTHKDLIANEPYKLQGFINFLRRIN---------N 115

Query: 64  ETARSLKDLLKTGTLKVLVEKAHDWVKEALNCYATPINMEEKD-FIIMMVVDACFIVEFF 123
               S++DLLKTG + +LVEKAH WVK+A NCYATP NM + D F++MM+VDACF+VEF 
Sbjct: 116 NKIESMEDLLKTGAVNILVEKAHHWVKKARNCYATPTNMMDIDEFVMMMLVDACFVVEFL 175

Query: 124 ILKVDESHPICKFDLIQENVDISFHGGIEVDITDDMIKLENQVPFFLLERLFEEIPKENV 183
           ILK D  HP CKF  IQ+NVDISF+ GI++ I  D+IKLENQVPFFLL  LF  IPK +V
Sbjct: 176 ILKFDCDHPDCKFFQIQDNVDISFYQGIDLHILYDLIKLENQVPFFLLRNLFNLIPKHDV 235

Query: 184 PIRSKFREEKEFPISSRDDKNVPVRSKFREEKELPISRDDENVPISLKDLAHWALKSRLV 243
           P+                                        +  S  DL H ALK RLV
Sbjct: 236 PM----------------------------------------IIFSFGDLTHKALKFRLV 255

Query: 244 RDCEIDLNK 251
           R  EIDL K
Sbjct: 296 RKYEIDLYK 255

BLAST of CsGy3G006160 vs. NCBI nr
Match: XP_038886585.1 (UPF0481 protein At3g47200-like [Benincasa hispida])

HSP 1 Score: 223 bits (567), Expect = 1.54e-65
Identity = 118/192 (61.46%), Postives = 142/192 (73.96%), Query Frame = 0

Query: 6   KVLCEMNPKTYVPQLISIGPFHHGTPKDLIANEKYKLHGFINFLRRINIKSTVEGGISET 65
           K L +MNPK Y PQLISIGP+HH T KDLIA E+YKL G INFLRRIN         +  
Sbjct: 57  KQLHDMNPKAYDPQLISIGPYHHFTRKDLIATEQYKLQGLINFLRRIN---------NNK 116

Query: 66  ARSLKDLLKTGTLKVLVEKAHDWVKEALNCYATPINMEEKDFIIMMVVDACFIVEFFILK 125
             SL+DLLK GTLK LVEKAH WVKEA NCYA  INM+E++F++MM+VDACFIVEFFIL 
Sbjct: 117 MESLEDLLKIGTLKALVEKAHCWVKEARNCYAAHINMKEEEFVMMMLVDACFIVEFFILY 176

Query: 126 VDESHPICKFDLIQENVDISFHGGIEVDITDDMIKLENQVPFFLLERLFEEIPKENVPIR 185
            D+ HP C+F  IQ NVD+SF+ GI   I  D+ KLENQVPFFLL  LF  IP+++VP+ 
Sbjct: 177 YDQGHPDCRFSQIQHNVDLSFYKGIVFHIFYDLTKLENQVPFFLLRSLFHLIPEDDVPMI 236

Query: 186 SKFREEKEFPIS 197
           S F ++++ PIS
Sbjct: 237 S-FIDDEDGPIS 238

BLAST of CsGy3G006160 vs. NCBI nr
Match: KAA0064943.1 (UPF0481 protein [Cucumis melo var. makuwa])

HSP 1 Score: 213 bits (541), Expect = 2.70e-62
Identity = 113/190 (59.47%), Postives = 142/190 (74.74%), Query Frame = 0

Query: 4   LSKVLCEMNPKTYVPQLISIGPFHHGTPKDLIANEKYKLHGFINFLRRINIKSTVEGGIS 63
           +SK L E+N K Y+PQLISIGP HHGT  DL+AN++YKL GFINFLRRINI +       
Sbjct: 39  ISKELLEINRKAYIPQLISIGPIHHGTNNDLVANQQYKLQGFINFLRRININN------- 98

Query: 64  ETARSLKDLLKTGTLKVLVEKAHDWVKEALNCYATP-INMEEKD-FIIMMVVDACFIVEF 123
           +   S++D+L+TGTL  LVEKAH WVKEA NCY +P IN  + D F+IMM+VDACFIVEF
Sbjct: 99  KQILSMEDILQTGTLNTLVEKAHHWVKEARNCYTSPPINTIDMDAFVIMMLVDACFIVEF 158

Query: 124 FILKVDESHPICKFDLIQENVDISFHGGIEVDITDDMIKLENQVPFFLLERLFEEIPKEN 183
            ILK D  HP  KF  IQ+N+DISF+ G+++ I  D+IKLENQVPFFLL+ LF+ IPK +
Sbjct: 159 LILKFDYDHPNGKFLQIQDNIDISFYQGMDLHILYDLIKLENQVPFFLLQYLFDLIPKHD 218

Query: 184 VPIR-SKFRE 190
           + +  S FR+
Sbjct: 219 ISMMISSFRD 221

BLAST of CsGy3G006160 vs. ExPASy TrEMBL
Match: A0A0A0L379 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G104330 PE=4 SV=1)

HSP 1 Score: 521 bits (1341), Expect = 1.16e-186
Identity = 259/259 (100.00%), Postives = 259/259 (100.00%), Query Frame = 0

Query: 1   MQHLSKVLCEMNPKTYVPQLISIGPFHHGTPKDLIANEKYKLHGFINFLRRINIKSTVEG 60
           MQHLSKVLCEMNPKTYVPQLISIGPFHHGTPKDLIANEKYKLHGFINFLRRINIKSTVEG
Sbjct: 1   MQHLSKVLCEMNPKTYVPQLISIGPFHHGTPKDLIANEKYKLHGFINFLRRINIKSTVEG 60

Query: 61  GISETARSLKDLLKTGTLKVLVEKAHDWVKEALNCYATPINMEEKDFIIMMVVDACFIVE 120
           GISETARSLKDLLKTGTLKVLVEKAHDWVKEALNCYATPINMEEKDFIIMMVVDACFIVE
Sbjct: 61  GISETARSLKDLLKTGTLKVLVEKAHDWVKEALNCYATPINMEEKDFIIMMVVDACFIVE 120

Query: 121 FFILKVDESHPICKFDLIQENVDISFHGGIEVDITDDMIKLENQVPFFLLERLFEEIPKE 180
           FFILKVDESHPICKFDLIQENVDISFHGGIEVDITDDMIKLENQVPFFLLERLFEEIPKE
Sbjct: 121 FFILKVDESHPICKFDLIQENVDISFHGGIEVDITDDMIKLENQVPFFLLERLFEEIPKE 180

Query: 181 NVPIRSKFREEKEFPISSRDDKNVPVRSKFREEKELPISRDDENVPISLKDLAHWALKSR 240
           NVPIRSKFREEKEFPISSRDDKNVPVRSKFREEKELPISRDDENVPISLKDLAHWALKSR
Sbjct: 181 NVPIRSKFREEKEFPISSRDDKNVPVRSKFREEKELPISRDDENVPISLKDLAHWALKSR 240

Query: 241 LVRDCEIDLNKNQTTWLIS 259
           LVRDCEIDLNKNQTTWLIS
Sbjct: 241 LVRDCEIDLNKNQTTWLIS 259

BLAST of CsGy3G006160 vs. ExPASy TrEMBL
Match: A0A5A7V9V0 (UPF0481 protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold82G002610 PE=4 SV=1)

HSP 1 Score: 213 bits (541), Expect = 1.31e-62
Identity = 113/190 (59.47%), Postives = 142/190 (74.74%), Query Frame = 0

Query: 4   LSKVLCEMNPKTYVPQLISIGPFHHGTPKDLIANEKYKLHGFINFLRRINIKSTVEGGIS 63
           +SK L E+N K Y+PQLISIGP HHGT  DL+AN++YKL GFINFLRRINI +       
Sbjct: 39  ISKELLEINRKAYIPQLISIGPIHHGTNNDLVANQQYKLQGFINFLRRININN------- 98

Query: 64  ETARSLKDLLKTGTLKVLVEKAHDWVKEALNCYATP-INMEEKD-FIIMMVVDACFIVEF 123
           +   S++D+L+TGTL  LVEKAH WVKEA NCY +P IN  + D F+IMM+VDACFIVEF
Sbjct: 99  KQILSMEDILQTGTLNTLVEKAHHWVKEARNCYTSPPINTIDMDAFVIMMLVDACFIVEF 158

Query: 124 FILKVDESHPICKFDLIQENVDISFHGGIEVDITDDMIKLENQVPFFLLERLFEEIPKEN 183
            ILK D  HP  KF  IQ+N+DISF+ G+++ I  D+IKLENQVPFFLL+ LF+ IPK +
Sbjct: 159 LILKFDYDHPNGKFLQIQDNIDISFYQGMDLHILYDLIKLENQVPFFLLQYLFDLIPKHD 218

Query: 184 VPIR-SKFRE 190
           + +  S FR+
Sbjct: 219 ISMMISSFRD 221

BLAST of CsGy3G006160 vs. ExPASy TrEMBL
Match: A0A1S3BCY5 (UPF0481 protein At3g47200-like OS=Cucumis melo OX=3656 GN=LOC103488292 PE=4 SV=1)

HSP 1 Score: 211 bits (536), Expect = 7.25e-62
Identity = 112/190 (58.95%), Postives = 142/190 (74.74%), Query Frame = 0

Query: 4   LSKVLCEMNPKTYVPQLISIGPFHHGTPKDLIANEKYKLHGFINFLRRINIKSTVEGGIS 63
           +SK L E+N K Y+PQLISIGP HHGT  DL+AN++YKL GFINFLRRINI +       
Sbjct: 39  VSKELLEINRKAYIPQLISIGPIHHGTNNDLVANQQYKLQGFINFLRRININN------- 98

Query: 64  ETARSLKDLLKTGTLKVLVEKAHDWVKEALNCYATP-INMEEKD-FIIMMVVDACFIVEF 123
           +   S++D+L+TGTL  LVEKAH WV+EA NCY +P IN  + D F+IMM+VDACFIVEF
Sbjct: 99  KQILSMEDILQTGTLNTLVEKAHHWVEEARNCYTSPPINTIDMDAFVIMMLVDACFIVEF 158

Query: 124 FILKVDESHPICKFDLIQENVDISFHGGIEVDITDDMIKLENQVPFFLLERLFEEIPKEN 183
            ILK D  HP  KF  IQ+N+DISF+ G+++ I  D+IKLENQVPFFLL+ LF+ IPK +
Sbjct: 159 LILKFDYDHPNGKFLQIQDNIDISFYQGMDLHILYDLIKLENQVPFFLLQYLFDLIPKHD 218

Query: 184 VPIR-SKFRE 190
           + +  S FR+
Sbjct: 219 ISMMISSFRD 221

BLAST of CsGy3G006160 vs. ExPASy TrEMBL
Match: A0A5A7VGS6 (UPF0481 protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold82G002590 PE=4 SV=1)

HSP 1 Score: 181 bits (458), Expect = 6.19e-50
Identity = 119/247 (48.18%), Postives = 143/247 (57.89%), Query Frame = 0

Query: 6   KVLCEMNPKTYVPQLISIGPFHHGTPKDLIANEKYKLHGFINFLRRINIKSTVEGGISET 65
           K L E+N K YVPQ ISIGPFH+ T KDLIANE YKL GF NFLR INI       + E 
Sbjct: 60  KELREINDKAYVPQFISIGPFHYRTRKDLIANEHYKLQGFYNFLRGININEKQVESLEE- 119

Query: 66  ARSLKDLLKTGTLKVLVEKAHDWVKEALNCYATPINMEEKDFIIMMVVDACFIVEFFIL- 125
                D +K  + KVLVEK+H W+KEA NCYA PI MEE++FIIMM+VDACFIVEFF+L 
Sbjct: 120 -----DQVKISS-KVLVEKSHSWMKEAWNCYAEPIKMEEEEFIIMMLVDACFIVEFFLLC 179

Query: 126 --KVDESHPICKFDLIQENVDISFHGGIEVDITDDMIKLENQVPFFLLERLFEEIPKENV 185
                E   + KF L        F+ G+  +I  D+IKLENQVPFFLL+ LF+ IPK+N 
Sbjct: 180 YGSFQEGDRLFKFSL--------FYYGVFYEILLDLIKLENQVPFFLLQNLFDLIPKDN- 239

Query: 186 PIRSKFREEKEFPISSRDDKNVPVRSKFREEKELPISRDDENVPISLKDLAHWALKS-RL 245
                            DD +  V              D E  PISL DL + ALK+   
Sbjct: 240 -----------------DDTSSIV--------------DYEAGPISLIDLTYMALKAFGF 259

Query: 246 VRDCEID 248
           VR+ EI+
Sbjct: 300 VREYEIN 259

BLAST of CsGy3G006160 vs. ExPASy TrEMBL
Match: A0A0A0LQ57 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G380610 PE=4 SV=1)

HSP 1 Score: 179 bits (454), Expect = 1.29e-49
Identity = 104/193 (53.89%), Postives = 130/193 (67.36%), Query Frame = 0

Query: 6   KVLCEMNPKTYVPQLISIGPFHHGTPKDLIANEKYKLHGFINFLRRINIKSTVEGGISET 65
           K L E+N K YVPQ ISIGPFH+ T KDLIANE YKL GF NFL RI+I       I+  
Sbjct: 47  KELREINDKAYVPQFISIGPFHYRTRKDLIANEHYKLQGFFNFLGRISI-------INSH 106

Query: 66  ARSLKDLLKTGTLKVLVEKAHDWVKEALNCYATPINMEEKDFIIMMVVDACFIVEFFILK 125
            + L++     + KVLVEK+HDWVKEA NCYA PI M++++FIIMM+VDACFIVEFF+L 
Sbjct: 107 IQLLEENQVNISSKVLVEKSHDWVKEAWNCYAEPIKMKDEEFIIMMLVDACFIVEFFLLY 166

Query: 126 VDESHPICKFDLIQENVDIS-FHGGIEVDITDDMIKLENQVPFFLLERLFEEIPKENVPI 185
               H   K      N ++S F+ G+  +I  D+IKLENQVPFFLL+ LF+ +PK+ V I
Sbjct: 167 YGSFHEDGKLF----NAELSLFYYGVFYEILLDLIKLENQVPFFLLQNLFDLMPKDKVDI 226

Query: 186 RSKFREEKEFPIS 197
            S     K+ PIS
Sbjct: 227 SSIIGGYKDSPIS 228

BLAST of CsGy3G006160 vs. TAIR 10
Match: AT4G31980.1 (unknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF247, plant (InterPro:IPR004158), Protein of unknown function DUF862, eukaryotic (InterPro:IPR008580); BEST Arabidopsis thaliana protein match is: Plant protein of unknown function (DUF247) (TAIR:AT5G11290.1); Has 1967 Blast hits to 1844 proteins in 183 species: Archae - 0; Bacteria - 6; Metazoa - 223; Fungi - 83; Plants - 1477; Viruses - 0; Other Eukaryotes - 178 (source: NCBI BLink). )

HSP 1 Score: 77.8 bits (190), Expect = 1.4e-14
Identity = 52/167 (31.14%), Postives = 81/167 (48.50%), Query Frame = 0

Query: 8   LCEMNPKTYVPQLISIGPFHHGTPKDLIANEKYKLHGFINFLRRINIKSTVEGGISETAR 67
           L  +NP  Y P+L+S GP H G  ++L A E  K    ++F+ R N              
Sbjct: 302 LRRLNPDAYTPRLVSFGPLHRG-KEELQAMEDQKYRYLLSFIPRTN-------------- 361

Query: 68  SLKDLLKTGTLKVLVEKAHDWVKEALNCYATPINMEEKDFIIMMVVDACFIVEFFILKVD 127
                    +L+ LV  A  W + A +CYA  + +   +F+ M+VVD  F+VE   L + 
Sbjct: 362 --------SSLEDLVRLARTWEQNARSCYAEDVKLHSDEFVEMLVVDGSFLVE---LLLR 421

Query: 128 ESHPICKFDLIQENVDISFHGGIEVDITDDMIKLENQVPFFLLERLF 175
             +P     L  EN  I  +  +  D+  DMI +ENQ+PFF+++ +F
Sbjct: 422 SHYP----RLRGENDRIFGNSMMITDVCRDMILIENQLPFFVVKEIF 438

BLAST of CsGy3G006160 vs. TAIR 10
Match: AT3G50170.1 (Plant protein of unknown function (DUF247) )

HSP 1 Score: 75.5 bits (184), Expect = 7.1e-14
Identity = 55/168 (32.74%), Postives = 81/168 (48.21%), Query Frame = 0

Query: 8   LCEMNPKTYVPQLISIGPFHHGTPKDLIANEKYKLHGFINFLRRINIKSTVEGGISETAR 67
           L E + K+Y PQ +S+GP+HHG  K L   E++K       L+R  +K  +E        
Sbjct: 122 LQENDKKSYFPQTVSLGPYHHG-KKRLRPMERHKWRALNKVLKR--LKQRIE-------- 181

Query: 68  SLKDLLKTGTLKVLVEKAHDWVKEALNCYATPINMEEKDFIIMMVVDACFIVEFFILKVD 127
                + T  ++ L EKA         CY  PI++   +F  M+V+D CF++E F   V+
Sbjct: 182 -----MYTNAMRELEEKAR-------ACYEGPISLSRNEFTEMLVLDGCFVLELFRGTVE 241

Query: 128 ESHPICKFDLIQENVDISFHGGIEVDITDDMIKLENQVPFFLLERLFE 176
               I        N  +    G+   I  DMI LENQ+P F+L+RL E
Sbjct: 242 GFTEIG----YARNDPVFAMRGLMHSIQRDMIMLENQLPLFVLDRLLE 262

BLAST of CsGy3G006160 vs. TAIR 10
Match: AT3G50170.2 (Plant protein of unknown function (DUF247) )

HSP 1 Score: 75.5 bits (184), Expect = 7.1e-14
Identity = 55/168 (32.74%), Postives = 81/168 (48.21%), Query Frame = 0

Query: 8   LCEMNPKTYVPQLISIGPFHHGTPKDLIANEKYKLHGFINFLRRINIKSTVEGGISETAR 67
           L E + K+Y PQ +S+GP+HHG  K L   E++K       L+R  +K  +E        
Sbjct: 122 LQENDKKSYFPQTVSLGPYHHG-KKRLRPMERHKWRALNKVLKR--LKQRIE-------- 181

Query: 68  SLKDLLKTGTLKVLVEKAHDWVKEALNCYATPINMEEKDFIIMMVVDACFIVEFFILKVD 127
                + T  ++ L EKA         CY  PI++   +F  M+V+D CF++E F   V+
Sbjct: 182 -----MYTNAMRELEEKAR-------ACYEGPISLSRNEFTEMLVLDGCFVLELFRGTVE 241

Query: 128 ESHPICKFDLIQENVDISFHGGIEVDITDDMIKLENQVPFFLLERLFE 176
               I        N  +    G+   I  DMI LENQ+P F+L+RL E
Sbjct: 242 GFTEIG----YARNDPVFAMRGLMHSIQRDMIMLENQLPLFVLDRLLE 262

BLAST of CsGy3G006160 vs. TAIR 10
Match: AT3G47210.1 (Plant protein of unknown function (DUF247) )

HSP 1 Score: 72.8 bits (177), Expect = 4.6e-13
Identity = 52/171 (30.41%), Postives = 78/171 (45.61%), Query Frame = 0

Query: 6   KVLCEMNPKTYVPQLISIGPFHHGTPKDLIANEKYKLHGFINFLRRINIKSTVEGGISET 65
           K   EMNP+ Y P+++SIGP+HHG  K L   +++KL     FLR  ++           
Sbjct: 100 KSFAEMNPEAYKPKVVSIGPYHHGR-KHLEMIQQHKLRFLHLFLRTASVDR--------- 159

Query: 66  ARSLKDLLKTGTLKVLVEKAHDWVKEALNCYATPINMEEKDFIIMMVVDACFIVEFFILK 125
                         VL     DW  E    Y+  +     + + MM++D CFI+   +L 
Sbjct: 160 -------------DVLFNAVVDWEDEIRKSYSEGLEGSPHELVYMMILDGCFIL-MLLLI 219

Query: 126 VDESHPICKFDLIQENVDISFHGGIEVDITDDMIKLENQVPFFLLERLFEE 177
           V       K +L +    I     I   I  D++ LENQVPFF+L+ LF++
Sbjct: 220 VSR-----KIELYESEDPILTIPWILPSIQSDLLLLENQVPFFVLQTLFDK 241

BLAST of CsGy3G006160 vs. TAIR 10
Match: AT3G50120.1 (Plant protein of unknown function (DUF247) )

HSP 1 Score: 72.4 bits (176), Expect = 6.0e-13
Identity = 48/168 (28.57%), Postives = 83/168 (49.40%), Query Frame = 0

Query: 8   LCEMNPKTYVPQLISIGPFHHGTPKDLIANEKYKLHGFINFLRRINIKSTVEGGISETAR 67
           L E + K+Y PQ +S+GP+HHG  K L + +++K       L+R N     +G       
Sbjct: 112 LQENDNKSYFPQTVSLGPYHHG-KKRLRSMDRHKWRAVNRVLKRTN-----QG------- 171

Query: 68  SLKDLLKTGTLKVLVEKAHDWVKEALNCYATPINMEEKDFIIMMVVDACFIVEFFILKVD 127
                     +K+ ++   +  ++A  CY  P+++   +FI M+V+D CF++E F   V+
Sbjct: 172 ----------IKMYIDAMRELEEKARACYEGPLSLSSNEFIEMLVLDGCFVLELFRGAVE 231

Query: 128 ESHPICKFDLIQENVDISFHGGIEVDITDDMIKLENQVPFFLLERLFE 176
                 +    + +   +  G +   I  DM+ LENQ+P F+L RL E
Sbjct: 232 ---GFTELGYARNDPVFAMRGSMH-SIQRDMVMLENQLPLFVLNRLLE 252

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Q9SD531.1e-0626.63UPF0481 protein At3g47200 OS=Arabidopsis thaliana OX=3702 GN=At3g47200 PE=2 SV=1[more]
Match NameE-valueIdentityDescription
XP_031739483.12.39e-186100.00UPF0481 protein At3g47200-like [Cucumis sativus] >XP_031739484.1 UPF0481 protein... [more]
XP_038889346.12.49e-7658.72UPF0481 protein At3g47200-like [Benincasa hispida][more]
XP_038890800.17.57e-6953.01UPF0481 protein At3g47200-like [Benincasa hispida][more]
XP_038886585.11.54e-6561.46UPF0481 protein At3g47200-like [Benincasa hispida][more]
KAA0064943.12.70e-6259.47UPF0481 protein [Cucumis melo var. makuwa][more]
Match NameE-valueIdentityDescription
A0A0A0L3791.16e-186100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G104330 PE=4 SV=1[more]
A0A5A7V9V01.31e-6259.47UPF0481 protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold82G00261... [more]
A0A1S3BCY57.25e-6258.95UPF0481 protein At3g47200-like OS=Cucumis melo OX=3656 GN=LOC103488292 PE=4 SV=1[more]
A0A5A7VGS66.19e-5048.18UPF0481 protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold82G00259... [more]
A0A0A0LQ571.29e-4953.89Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G380610 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
AT4G31980.11.4e-1431.14unknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF247,... [more]
AT3G50170.17.1e-1432.74Plant protein of unknown function (DUF247) [more]
AT3G50170.27.1e-1432.74Plant protein of unknown function (DUF247) [more]
AT3G47210.14.6e-1330.41Plant protein of unknown function (DUF247) [more]
AT3G50120.16.0e-1328.57Plant protein of unknown function (DUF247) [more]
InterPro
Analysis Name: InterPro Annotations of Cucumber (Gy14) v2.1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR004158Protein of unknown function DUF247, plantPFAMPF03140DUF247coord: 8..198
e-value: 6.5E-32
score: 111.3
IPR004158Protein of unknown function DUF247, plantPANTHERPTHR31549PROTEIN, PUTATIVE (DUF247)-RELATED-RELATEDcoord: 4..192
NoneNo IPR availablePANTHERPTHR31549:SF190UPF0481 PROTEIN-RELATEDcoord: 4..192

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsGy3G006160.2CsGy3G006160.2mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0016020 membrane