CsGy3G006030 (gene) Cucumber (Gy14) v2.1

Overview


Name	CsGy3G006030
Type	gene
Organism	Cucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
Description	U3 small nucleolar RNA-associated protein 14 B isoform 1
Location	Gy14Chr3: 5025885 .. 5028228 (-)
RNA-Seq Expression	CsGy3G006030
Synteny	CsGy3G006030

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGACAAGTTTCATCAGATTTTCTACCTTCAACATACTACACAACAATTTCTGCAACAAACCCACCAAATTCAATCCTCTTCCCCCTCCCAAGGTTGTCTTCTGCAAACCAAGTGGGCTTCGTTTGAGGTTTTATGGATGGAGATTGTTGTTTCCCGGTGGTGGTTGGGTTGACCAACGGGTTTTTGGAAAGCATGGAGGGTTTAAGGGAAAAAGAGGGCGGCTAATTGTTGCAAGGTTTAACCAGGGTTTTGGGTTTAACGGCGGCGGTGGTGACGGTGGTGACGGTGGTGACGGCGGAGACGACGGGGCAACTGCGAGGCTTGTGGGTAATATTGCTTTGGCTGCTGGCTTAACTTACCTCTCGGTGACAGGGCAGCTTGGCTGGGTTTTGGATGCCATTGTTTCCATTTGGGTCTGTATTCTTCTTCTTCTTCTCCCTTTCTCTCTCTGCTTCTGCTTTTGTTTCTGGAGTTTAAGATCTGTTTTTTCTCTTTGGAAAACTGGGTGAAATGTACTTGATTTGCTTGTGTTAAGCAGTTTTAGTTTTAGTGATTATTGATGAACATTTGAATGACACTATTCTTTTACTTGCTTTTTTGTTTTAATTTTGCTGGTATTATCAATTCTGCGTTCAACGTAGTCCATTTATCTTATTAAGACAATAAGATCCTCTGCATGTCTCAAAGATGGTGGGTTCATCAATCTTGGATATAAAATTCAATTTTTGTTTTTGGATTGAATATCAAAATCACTTACTTACCTAACAACTTAAACTAATGAAGTGATAATTTAATTATATCAACACTTCAACAATCCCTATAACTAGTTCTTATTCTGTATTTCTTAAACTTTCAAAAGAAACATAGAAATTTTCCTTTTAGTTGTGATGGAAGGGGAAGGGGAGCTTTTCCACCTTACATTAGAGGGCATTTTCTTTGATAGCTGTGGAGAGTAAAATGAGAATGGTTAGCTATTATATTAAATTTATCATTACCTACTAGTTTAAGCTTTTAAGTGAATAGGTGATTTAAGATGATATCAAAATAGGTTGTTTCAGAATGTCGTGGATTCAAGCCTCTACAATATTATTTCTTCCCCAATTAATATTTACTTGCTTGACTATTCTTCATATTTCATGTCTGCAAGTGAATGAAGTATTAGATATTATATTTAATTTATTCTTACCCATTAGCTTGAGCTTTTAAGCTTTTAGATGATTGGTGATTTAAGAACCATAAGTATATATAACATTCTTGCTGAGAGGTTGATTGAGAGAGTGTGGCTCACTTCAATCCCTCCCTTTAGATATATGCTATCGAGTTCTTTTATAAAATTTAGTTTTGTTTTGCATGGAATATCTCCAATCTGAAGTTTAGTTGTGTTTTTGGATGGAATATCTTTGATTTGCTTCCTCTGGCTCAGGCTTTGAAAACTGGTTTCTAGTGGGAGAAAAATGTGTGTATGTAGCTCTCTTTTGTTTGGATTCAAGAACTGGTGGAAGATGAATTCCTTTTTGTTTTAGCTTTTAGAGCCTTGGTTTAATCTGTTAACATATATGGCCATTCAGCTTGTTGCAGTTCTTGTACCAATTGTTGGAGTGGCCGCTTTTATATGGTGGGCAGGACGCGATATAGTTCAAAGCAATGTTAGTCTATATTATATCTTTTGCATTTTCAACCTCAAATCTTGAGCCTATATAACTTCTAAATGACATGCTGTCACTTCTTGTCTTGCATTTGCAGTGCCCTAACTGTGGAAATGAATTTCAAATATTCAAGTAAGTGATCTTGAAAGAACTCGTTTGAGGAGATTACTCGATTTTGAAATGATTAGCACACTTCATTTACCATCCATATTGCAGATCAACTCTGAATGAAGAGCTGCAACTGTGCCCTTTTTGTAGCCAACCTTTTTCTGGTAAATACCAAATTTTTATAGATCCCAAGTTCTTATTGTTGTTGGATCGTGAACTGTTAGTTTATCATGGTTTGGTTTGTTTCGTTTTCCTTTTCCTTATATGCAAGAACATCGAATACTGCATAACAACTTCTTATTTATTTGTGTATATTGATTCTTCCTTCACAAATTCAGTGGTGGATGACAAGTTTGTGAGGGACTCAGTGAAGTTCTCCAACAAAACTTCTTCCACCTTTGGACAAGCTTTTAGTGACTTTACTTCTCCAAGAAAAGGTAAGATTCTTCCTGGACTAAATCAATCTTCCCACCCCCCAAAGAAATATTCAACCTACTCGAAACCCAACCACCTCTTGTGATTGATTGAAGGGAAGGAAACTTCTGGTGCAGTTGTTGACATAGAAGCAGAAGTAAAAGATGTGGACTGA

mRNA sequence

ATGACAAGTTTCATCAGATTTTCTACCTTCAACATACTACACAACAATTTCTGCAACAAACCCACCAAATTCAATCCTCTTCCCCCTCCCAAGGTTGTCTTCTGCAAACCAAGTGGGCTTCGTTTGAGGTTTTATGGATGGAGATTGTTGTTTCCCGGTGGTGGTTGGGTTGACCAACGGGTTTTTGGAAAGCATGGAGGGTTTAAGGGAAAAAGAGGGCGGCTAATTGTTGCAAGGTTTAACCAGGGTTTTGGGTTTAACGGCGGCGGTGGTGACGGTGGTGACGGTGGTGACGGCGGAGACGACGGGGCAACTGCGAGGCTTGTGGGTAATATTGCTTTGGCTGCTGGCTTAACTTACCTCTCGGTGACAGGGCAGCTTGGCTGGGTTTTGGATGCCATTGTTTCCATTTGGCTTGTTGCAGTTCTTGTACCAATTGTTGGAGTGGCCGCTTTTATATGGTGGGCAGGACGCGATATAGTTCAAAGCAATTGCCCTAACTGTGGAAATGAATTTCAAATATTCAAATCAACTCTGAATGAAGAGCTGCAACTGTGCCCTTTTTGTAGCCAACCTTTTTCTGTGGTGGATGACAAGTTTGTGAGGGACTCAGTGAAGTTCTCCAACAAAACTTCTTCCACCTTTGGACAAGCTTTTAGTGACTTTACTTCTCCAAGAAAAGGGAAGGAAACTTCTGGTGCAGTTGTTGACATAGAAGCAGAAGTAAAAGATGTGGACTGA

Coding sequence (CDS)

ATGACAAGTTTCATCAGATTTTCTACCTTCAACATACTACACAACAATTTCTGCAACAAACCCACCAAATTCAATCCTCTTCCCCCTCCCAAGGTTGTCTTCTGCAAACCAAGTGGGCTTCGTTTGAGGTTTTATGGATGGAGATTGTTGTTTCCCGGTGGTGGTTGGGTTGACCAACGGGTTTTTGGAAAGCATGGAGGGTTTAAGGGAAAAAGAGGGCGGCTAATTGTTGCAAGGTTTAACCAGGGTTTTGGGTTTAACGGCGGCGGTGGTGACGGTGGTGACGGTGGTGACGGCGGAGACGACGGGGCAACTGCGAGGCTTGTGGGTAATATTGCTTTGGCTGCTGGCTTAACTTACCTCTCGGTGACAGGGCAGCTTGGCTGGGTTTTGGATGCCATTGTTTCCATTTGGCTTGTTGCAGTTCTTGTACCAATTGTTGGAGTGGCCGCTTTTATATGGTGGGCAGGACGCGATATAGTTCAAAGCAATTGCCCTAACTGTGGAAATGAATTTCAAATATTCAAATCAACTCTGAATGAAGAGCTGCAACTGTGCCCTTTTTGTAGCCAACCTTTTTCTGTGGTGGATGACAAGTTTGTGAGGGACTCAGTGAAGTTCTCCAACAAAACTTCTTCCACCTTTGGACAAGCTTTTAGTGACTTTACTTCTCCAAGAAAAGGGAAGGAAACTTCTGGTGCAGTTGTTGACATAGAAGCAGAAGTAAAAGATGTGGACTGA

Protein sequence

MTSFIRFSTFNILHNNFCNKPTKFNPLPPPKVVFCKPSGLRLRFYGWRLLFPGGGWVDQRVFGKHGGFKGKRGRLIVARFNQGFGFNGGGGDGGDGGDGGDDGATARLVGNIALAAGLTYLSVTGQLGWVLDAIVSIWLVAVLVPIVGVAAFIWWAGRDIVQSNCPNCGNEFQIFKSTLNEELQLCPFCSQPFSVVDDKFVRDSVKFSNKTSSTFGQAFSDFTSPRKGKETSGAVVDIEAEVKDVD*

Homology

[Close]

BLAST of CsGy3G006030 vs. NCBI nr
Match: XP_004149291.1 (uncharacterized protein LOC101205846 [Cucumis sativus] >KGN56214.1 hypothetical protein Csa_010420 [Cucumis sativus])

HSP 1 Score: 496 bits (1277), Expect = 5.00e-177
Identity = 246/246 (100.00%), Postives = 246/246 (100.00%), Query Frame = 0


Query: 1   MTSFIRFSTFNILHNNFCNKPTKFNPLPPPKVVFCKPSGLRLRFYGWRLLFPGGGWVDQR 60
           MTSFIRFSTFNILHNNFCNKPTKFNPLPPPKVVFCKPSGLRLRFYGWRLLFPGGGWVDQR
Sbjct: 1   MTSFIRFSTFNILHNNFCNKPTKFNPLPPPKVVFCKPSGLRLRFYGWRLLFPGGGWVDQR 60

Query: 61  VFGKHGGFKGKRGRLIVARFNQGFGFNGGGGDGGDGGDGGDDGATARLVGNIALAAGLTY 120
           VFGKHGGFKGKRGRLIVARFNQGFGFNGGGGDGGDGGDGGDDGATARLVGNIALAAGLTY
Sbjct: 61  VFGKHGGFKGKRGRLIVARFNQGFGFNGGGGDGGDGGDGGDDGATARLVGNIALAAGLTY 120

Query: 121 LSVTGQLGWVLDAIVSIWLVAVLVPIVGVAAFIWWAGRDIVQSNCPNCGNEFQIFKSTLN 180
           LSVTGQLGWVLDAIVSIWLVAVLVPIVGVAAFIWWAGRDIVQSNCPNCGNEFQIFKSTLN
Sbjct: 121 LSVTGQLGWVLDAIVSIWLVAVLVPIVGVAAFIWWAGRDIVQSNCPNCGNEFQIFKSTLN 180

Query: 181 EELQLCPFCSQPFSVVDDKFVRDSVKFSNKTSSTFGQAFSDFTSPRKGKETSGAVVDIEA 240
           EELQLCPFCSQPFSVVDDKFVRDSVKFSNKTSSTFGQAFSDFTSPRKGKETSGAVVDIEA
Sbjct: 181 EELQLCPFCSQPFSVVDDKFVRDSVKFSNKTSSTFGQAFSDFTSPRKGKETSGAVVDIEA 240

Query: 241 EVKDVD 246
           EVKDVD
Sbjct: 241 EVKDVD 246

[Close]

BLAST of CsGy3G006030 vs. NCBI nr
Match: XP_008452285.1 (PREDICTED: uncharacterized protein LOC103493356 [Cucumis melo] >KAA0046868.1 uncharacterized protein E6C27_scaffold230G00230 [Cucumis melo var. makuwa] >TYK03278.1 uncharacterized protein E5676_scaffold298G001050 [Cucumis melo var. makuwa])

HSP 1 Score: 457 bits (1177), Expect = 7.08e-162
Identity = 231/246 (93.90%), Postives = 233/246 (94.72%), Query Frame = 0


Query: 1   MTSFIRFSTFNILHNNFCNKPTKFNPLPPPKVVFCKPSGLRLRFYGWRLLFPGGGWVDQR 60
           MTSFIRFSTFNILHNNFCNKPTKFNPLPPPKVV C PSGLRLRFYG RL FPGGGWV+QR
Sbjct: 1   MTSFIRFSTFNILHNNFCNKPTKFNPLPPPKVVICNPSGLRLRFYGRRLFFPGGGWVEQR 60

Query: 61  VFGKHGGFKGKRGRLIVARFNQGFGFNGGGGDGGDGGDGGDDGATARLVGNIALAAGLTY 120
           VFGKH GFKGKRGRLIVARFNQGFGFNGGGGDGGD      DGATARL+GNIALAAGLTY
Sbjct: 61  VFGKHRGFKGKRGRLIVARFNQGFGFNGGGGDGGD------DGATARLLGNIALAAGLTY 120

Query: 121 LSVTGQLGWVLDAIVSIWLVAVLVPIVGVAAFIWWAGRDIVQSNCPNCGNEFQIFKSTLN 180
           LSVTGQLGWVLDAIVSIWLVAVLVPIVGVAAFIWWAGRDIVQSNCPNCGNEFQIFKSTLN
Sbjct: 121 LSVTGQLGWVLDAIVSIWLVAVLVPIVGVAAFIWWAGRDIVQSNCPNCGNEFQIFKSTLN 180

Query: 181 EELQLCPFCSQPFSVVDDKFVRDSVKFSNKTSSTFGQAFSDFTSPRKGKETSGAVVDIEA 240
           EELQLCPFCSQPFSVVDDKFVRDSV FS KTSSTFGQAFSDFTSPRKGKETSGAVVDIEA
Sbjct: 181 EELQLCPFCSQPFSVVDDKFVRDSVTFSKKTSSTFGQAFSDFTSPRKGKETSGAVVDIEA 240

Query: 241 EVKDVD 246
           EVKDVD
Sbjct: 241 EVKDVD 240

[Close]

BLAST of CsGy3G006030 vs. NCBI nr
Match: XP_038905451.1 (uncharacterized protein LOC120091477 isoform X2 [Benincasa hispida] >XP_038905452.1 uncharacterized protein LOC120091477 isoform X2 [Benincasa hispida])

HSP 1 Score: 399 bits (1026), Expect = 7.52e-139
Identity = 212/246 (86.18%), Postives = 218/246 (88.62%), Query Frame = 0


Query: 1   MTSFIRFSTFNILHNNFCNKPTKFNPLPPPKVVFCKPSGLRLRFYGWRLLFPGGGWVDQR 60
           MTSFIRFST NILH++FCNKPTKFNPLP PKV     +G RLR YG RL F      + R
Sbjct: 1   MTSFIRFSTLNILHDSFCNKPTKFNPLPAPKVASWDRNGFRLRVYGRRLSFLDVCRGNVR 60

Query: 61  VFGKHGGFKGKRGRLIVARFNQGFGFNGGGGDGGDGGDGGDDGATARLVGNIALAAGLTY 120
           VFGKHGG KGKRG LIVARFNQGFGFNGGGG GG    GGDDGATARL+GNIALA GLTY
Sbjct: 61  VFGKHGGSKGKRG-LIVARFNQGFGFNGGGGGGG----GGDDGATARLLGNIALAVGLTY 120

Query: 121 LSVTGQLGWVLDAIVSIWLVAVLVPIVGVAAFIWWAGRDIVQSNCPNCGNEFQIFKSTLN 180
           LSVTGQLGWVLDAIVSIWLVAVLVPIVGVAAFIWWAGRDIVQS CPNCGNEFQIFKSTLN
Sbjct: 121 LSVTGQLGWVLDAIVSIWLVAVLVPIVGVAAFIWWAGRDIVQSTCPNCGNEFQIFKSTLN 180

Query: 181 EELQLCPFCSQPFSVVDDKFVRDSVKFSNKTSSTFGQAFSDFTSPRKGKETSGAVVDIEA 240
           EELQLCPFCSQPFSVVDDKFVRDSVKFSNKTSSTFGQAF DFTSP+KGKETSGAVVDIEA
Sbjct: 181 EELQLCPFCSQPFSVVDDKFVRDSVKFSNKTSSTFGQAFGDFTSPQKGKETSGAVVDIEA 240

Query: 241 EVKDVD 246
           EVKDVD
Sbjct: 241 EVKDVD 241

[Close]

BLAST of CsGy3G006030 vs. NCBI nr
Match: KAG7015466.1 (hypothetical protein SDJN02_23102 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 399 bits (1025), Expect = 1.07e-138
Identity = 208/246 (84.55%), Postives = 218/246 (88.62%), Query Frame = 0


Query: 1   MTSFIRFSTFNILHNNFCNKPTKFNPLPPPKVVFCKPSGLRLRFYGWRLLFPGGGWVDQR 60
           MTSFIRFS+FN+LH+NF  KPT+FNPLPPPKV  C  +G RLR    +L F  GGW +  
Sbjct: 1   MTSFIRFSSFNLLHDNFYTKPTRFNPLPPPKVASCHRNGFRLRLCRGKLPFLSGGWGNNG 60

Query: 61  VFGKHGGFKGKRGRLIVARFNQGFGFNGGGGDGGDGGDGGDDGATARLVGNIALAAGLTY 120
           V GK+G FKGKRG LIVARFNQGFGFNGG    G GG GGDDGATARL+GNIALAAGLTY
Sbjct: 61  VSGKYGVFKGKRG-LIVARFNQGFGFNGG----GSGGGGGDDGATARLLGNIALAAGLTY 120

Query: 121 LSVTGQLGWVLDAIVSIWLVAVLVPIVGVAAFIWWAGRDIVQSNCPNCGNEFQIFKSTLN 180
           LSVTGQLGW+LDAIVSIWLVAVLVPIVGVAAFIWWAGRDIVQS CPNCGNEFQIFKSTLN
Sbjct: 121 LSVTGQLGWILDAIVSIWLVAVLVPIVGVAAFIWWAGRDIVQSTCPNCGNEFQIFKSTLN 180

Query: 181 EELQLCPFCSQPFSVVDDKFVRDSVKFSNKTSSTFGQAFSDFTSPRKGKETSGAVVDIEA 240
           EELQLCPFCSQPFSVVDDKFVRDSV FSNKTSSTFGQAFSDFTSPRKGKETSGAVVDIEA
Sbjct: 181 EELQLCPFCSQPFSVVDDKFVRDSVMFSNKTSSTFGQAFSDFTSPRKGKETSGAVVDIEA 240

Query: 241 EVKDVD 246
           EVKDVD
Sbjct: 241 EVKDVD 241

[Close]

BLAST of CsGy3G006030 vs. NCBI nr
Match: XP_023552443.1 (uncharacterized protein LOC111810103 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 399 bits (1025), Expect = 1.07e-138
Identity = 207/246 (84.15%), Postives = 219/246 (89.02%), Query Frame = 0


Query: 1   MTSFIRFSTFNILHNNFCNKPTKFNPLPPPKVVFCKPSGLRLRFYGWRLLFPGGGWVDQR 60
           MTSFIRFS+FN+LH+NF  KPT+FNPLPPPKV  C  +G RLR  G +L F  GGW +  
Sbjct: 1   MTSFIRFSSFNLLHDNFYTKPTRFNPLPPPKVASCHRNGFRLRLCGGKLPFLSGGWGNNG 60

Query: 61  VFGKHGGFKGKRGRLIVARFNQGFGFNGGGGDGGDGGDGGDDGATARLVGNIALAAGLTY 120
           V GK+G FKG+RG LIVARF+QGFGFNGG    G GG GGDDGATARL+GNIALAAGLTY
Sbjct: 61  VSGKYGVFKGRRG-LIVARFDQGFGFNGG----GSGGGGGDDGATARLLGNIALAAGLTY 120

Query: 121 LSVTGQLGWVLDAIVSIWLVAVLVPIVGVAAFIWWAGRDIVQSNCPNCGNEFQIFKSTLN 180
           LSVTGQLGW+LDAIVSIWLVAVLVPIVGVAAFIWWAGRDIVQS CPNCGNEFQIFKSTLN
Sbjct: 121 LSVTGQLGWILDAIVSIWLVAVLVPIVGVAAFIWWAGRDIVQSTCPNCGNEFQIFKSTLN 180

Query: 181 EELQLCPFCSQPFSVVDDKFVRDSVKFSNKTSSTFGQAFSDFTSPRKGKETSGAVVDIEA 240
           EELQLCPFCSQPFSVVDDKFVRDSV FSNKTSSTFGQAFSDFTSPRKGKETSGAVVDIEA
Sbjct: 181 EELQLCPFCSQPFSVVDDKFVRDSVMFSNKTSSTFGQAFSDFTSPRKGKETSGAVVDIEA 240

Query: 241 EVKDVD 246
           EVKDVD
Sbjct: 241 EVKDVD 241

[Close]

BLAST of CsGy3G006030 vs. ExPASy TrEMBL
Match: A0A0A0L5A4 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G099750 PE=4 SV=1)

HSP 1 Score: 496 bits (1277), Expect = 2.42e-177
Identity = 246/246 (100.00%), Postives = 246/246 (100.00%), Query Frame = 0


Query: 1   MTSFIRFSTFNILHNNFCNKPTKFNPLPPPKVVFCKPSGLRLRFYGWRLLFPGGGWVDQR 60
           MTSFIRFSTFNILHNNFCNKPTKFNPLPPPKVVFCKPSGLRLRFYGWRLLFPGGGWVDQR
Sbjct: 1   MTSFIRFSTFNILHNNFCNKPTKFNPLPPPKVVFCKPSGLRLRFYGWRLLFPGGGWVDQR 60

Query: 61  VFGKHGGFKGKRGRLIVARFNQGFGFNGGGGDGGDGGDGGDDGATARLVGNIALAAGLTY 120
           VFGKHGGFKGKRGRLIVARFNQGFGFNGGGGDGGDGGDGGDDGATARLVGNIALAAGLTY
Sbjct: 61  VFGKHGGFKGKRGRLIVARFNQGFGFNGGGGDGGDGGDGGDDGATARLVGNIALAAGLTY 120

Query: 121 LSVTGQLGWVLDAIVSIWLVAVLVPIVGVAAFIWWAGRDIVQSNCPNCGNEFQIFKSTLN 180
           LSVTGQLGWVLDAIVSIWLVAVLVPIVGVAAFIWWAGRDIVQSNCPNCGNEFQIFKSTLN
Sbjct: 121 LSVTGQLGWVLDAIVSIWLVAVLVPIVGVAAFIWWAGRDIVQSNCPNCGNEFQIFKSTLN 180

Query: 181 EELQLCPFCSQPFSVVDDKFVRDSVKFSNKTSSTFGQAFSDFTSPRKGKETSGAVVDIEA 240
           EELQLCPFCSQPFSVVDDKFVRDSVKFSNKTSSTFGQAFSDFTSPRKGKETSGAVVDIEA
Sbjct: 181 EELQLCPFCSQPFSVVDDKFVRDSVKFSNKTSSTFGQAFSDFTSPRKGKETSGAVVDIEA 240

Query: 241 EVKDVD 246
           EVKDVD
Sbjct: 241 EVKDVD 246

[Close]

BLAST of CsGy3G006030 vs. ExPASy TrEMBL
Match: A0A5A7TVG5 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold298G001050 PE=4 SV=1)

HSP 1 Score: 457 bits (1177), Expect = 3.43e-162
Identity = 231/246 (93.90%), Postives = 233/246 (94.72%), Query Frame = 0


Query: 1   MTSFIRFSTFNILHNNFCNKPTKFNPLPPPKVVFCKPSGLRLRFYGWRLLFPGGGWVDQR 60
           MTSFIRFSTFNILHNNFCNKPTKFNPLPPPKVV C PSGLRLRFYG RL FPGGGWV+QR
Sbjct: 1   MTSFIRFSTFNILHNNFCNKPTKFNPLPPPKVVICNPSGLRLRFYGRRLFFPGGGWVEQR 60

Query: 61  VFGKHGGFKGKRGRLIVARFNQGFGFNGGGGDGGDGGDGGDDGATARLVGNIALAAGLTY 120
           VFGKH GFKGKRGRLIVARFNQGFGFNGGGGDGGD      DGATARL+GNIALAAGLTY
Sbjct: 61  VFGKHRGFKGKRGRLIVARFNQGFGFNGGGGDGGD------DGATARLLGNIALAAGLTY 120

Query: 121 LSVTGQLGWVLDAIVSIWLVAVLVPIVGVAAFIWWAGRDIVQSNCPNCGNEFQIFKSTLN 180
           LSVTGQLGWVLDAIVSIWLVAVLVPIVGVAAFIWWAGRDIVQSNCPNCGNEFQIFKSTLN
Sbjct: 121 LSVTGQLGWVLDAIVSIWLVAVLVPIVGVAAFIWWAGRDIVQSNCPNCGNEFQIFKSTLN 180

Query: 181 EELQLCPFCSQPFSVVDDKFVRDSVKFSNKTSSTFGQAFSDFTSPRKGKETSGAVVDIEA 240
           EELQLCPFCSQPFSVVDDKFVRDSV FS KTSSTFGQAFSDFTSPRKGKETSGAVVDIEA
Sbjct: 181 EELQLCPFCSQPFSVVDDKFVRDSVTFSKKTSSTFGQAFSDFTSPRKGKETSGAVVDIEA 240

Query: 241 EVKDVD 246
           EVKDVD
Sbjct: 241 EVKDVD 240

[Close]

BLAST of CsGy3G006030 vs. ExPASy TrEMBL
Match: A0A1S3BUA7 (uncharacterized protein LOC103493356 OS=Cucumis melo OX=3656 GN=LOC103493356 PE=4 SV=1)

HSP 1 Score: 457 bits (1177), Expect = 3.43e-162
Identity = 231/246 (93.90%), Postives = 233/246 (94.72%), Query Frame = 0


Query: 1   MTSFIRFSTFNILHNNFCNKPTKFNPLPPPKVVFCKPSGLRLRFYGWRLLFPGGGWVDQR 60
           MTSFIRFSTFNILHNNFCNKPTKFNPLPPPKVV C PSGLRLRFYG RL FPGGGWV+QR
Sbjct: 1   MTSFIRFSTFNILHNNFCNKPTKFNPLPPPKVVICNPSGLRLRFYGRRLFFPGGGWVEQR 60

Query: 61  VFGKHGGFKGKRGRLIVARFNQGFGFNGGGGDGGDGGDGGDDGATARLVGNIALAAGLTY 120
           VFGKH GFKGKRGRLIVARFNQGFGFNGGGGDGGD      DGATARL+GNIALAAGLTY
Sbjct: 61  VFGKHRGFKGKRGRLIVARFNQGFGFNGGGGDGGD------DGATARLLGNIALAAGLTY 120

Query: 121 LSVTGQLGWVLDAIVSIWLVAVLVPIVGVAAFIWWAGRDIVQSNCPNCGNEFQIFKSTLN 180
           LSVTGQLGWVLDAIVSIWLVAVLVPIVGVAAFIWWAGRDIVQSNCPNCGNEFQIFKSTLN
Sbjct: 121 LSVTGQLGWVLDAIVSIWLVAVLVPIVGVAAFIWWAGRDIVQSNCPNCGNEFQIFKSTLN 180

Query: 181 EELQLCPFCSQPFSVVDDKFVRDSVKFSNKTSSTFGQAFSDFTSPRKGKETSGAVVDIEA 240
           EELQLCPFCSQPFSVVDDKFVRDSV FS KTSSTFGQAFSDFTSPRKGKETSGAVVDIEA
Sbjct: 181 EELQLCPFCSQPFSVVDDKFVRDSVTFSKKTSSTFGQAFSDFTSPRKGKETSGAVVDIEA 240

Query: 241 EVKDVD 246
           EVKDVD
Sbjct: 241 EVKDVD 240

[Close]

BLAST of CsGy3G006030 vs. ExPASy TrEMBL
Match: A0A6J1JCT5 (uncharacterized protein LOC111483302 OS=Cucurbita maxima OX=3661 GN=LOC111483302 PE=4 SV=1)

HSP 1 Score: 399 bits (1024), Expect = 7.34e-139
Identity = 209/247 (84.62%), Postives = 220/247 (89.07%), Query Frame = 0


Query: 1   MTSFIRFSTFNIL-HNNFCNKPTKFNPLPPPKVVFCKPSGLRLRFYGWRLLFPGGGWVDQ 60
           MTSFIRFS+FN+L H+NF  KPT+FNPLPPPKV  C  +G RLR  G +L F  GGW ++
Sbjct: 1   MTSFIRFSSFNLLLHDNFYKKPTRFNPLPPPKVASCDRNGFRLRLCGGKLPFLSGGWSNK 60

Query: 61  RVFGKHGGFKGKRGRLIVARFNQGFGFNGGGGDGGDGGDGGDDGATARLVGNIALAAGLT 120
            V GK+G FKGKRG LIVARFNQGFGFNGGGG GG     GDDGATARL+GNIALAAGLT
Sbjct: 61  GVLGKYGVFKGKRG-LIVARFNQGFGFNGGGGGGG-----GDDGATARLLGNIALAAGLT 120

Query: 121 YLSVTGQLGWVLDAIVSIWLVAVLVPIVGVAAFIWWAGRDIVQSNCPNCGNEFQIFKSTL 180
           YLSVTGQLGW+LDAIVSIWLVAVLVPIVGVAAFIWWAGRDIVQS CPNCGNEFQIFKSTL
Sbjct: 121 YLSVTGQLGWILDAIVSIWLVAVLVPIVGVAAFIWWAGRDIVQSTCPNCGNEFQIFKSTL 180

Query: 181 NEELQLCPFCSQPFSVVDDKFVRDSVKFSNKTSSTFGQAFSDFTSPRKGKETSGAVVDIE 240
           NEELQLCPFCSQPFSVVDDKFVRDSV FSNKTSSTFGQAFSDFTSPRKGKETSGAVVDIE
Sbjct: 181 NEELQLCPFCSQPFSVVDDKFVRDSVMFSNKTSSTFGQAFSDFTSPRKGKETSGAVVDIE 240

Query: 241 AEVKDVD 246
           AEVKDVD
Sbjct: 241 AEVKDVD 241

[Close]

BLAST of CsGy3G006030 vs. ExPASy TrEMBL
Match: A0A6J1EMN9 (uncharacterized protein LOC111435981 OS=Cucurbita moschata OX=3662 GN=LOC111435981 PE=4 SV=1)

HSP 1 Score: 397 bits (1021), Expect = 2.10e-138
Identity = 208/246 (84.55%), Postives = 218/246 (88.62%), Query Frame = 0


Query: 1   MTSFIRFSTFNILHNNFCNKPTKFNPLPPPKVVFCKPSGLRLRFYGWRLLFPGGGWVDQR 60
           MTSFIRFS+FN+LH+NF  KPT+FNPLPPPKV  C  +G RLR    +L F  GGW +  
Sbjct: 1   MTSFIRFSSFNLLHDNFYTKPTRFNPLPPPKVASCHRNGFRLRPCRGKLPFLSGGWGNNG 60

Query: 61  VFGKHGGFKGKRGRLIVARFNQGFGFNGGGGDGGDGGDGGDDGATARLVGNIALAAGLTY 120
           V GK+G FKGKRG LIVARFNQGFGFNGG    G GG GGDDGATARL+GNIALAAGLTY
Sbjct: 61  VSGKYGVFKGKRG-LIVARFNQGFGFNGG----GSGGGGGDDGATARLLGNIALAAGLTY 120

Query: 121 LSVTGQLGWVLDAIVSIWLVAVLVPIVGVAAFIWWAGRDIVQSNCPNCGNEFQIFKSTLN 180
           LSVTGQLGW+LDAIVSIWLVAVLVPIVGVAAFIWWAGRDIVQS CPNCGNEFQIFKSTLN
Sbjct: 121 LSVTGQLGWILDAIVSIWLVAVLVPIVGVAAFIWWAGRDIVQSTCPNCGNEFQIFKSTLN 180

Query: 181 EELQLCPFCSQPFSVVDDKFVRDSVKFSNKTSSTFGQAFSDFTSPRKGKETSGAVVDIEA 240
           EELQLCPFCSQPFSVVDDKFVRDSV FSNKTSSTFGQAFSDFTSPRKGKETSGAVVDIEA
Sbjct: 181 EELQLCPFCSQPFSVVDDKFVRDSVMFSNKTSSTFGQAFSDFTSPRKGKETSGAVVDIEA 240

Query: 241 EVKDVD 246
           EVKDVD
Sbjct: 241 EVKDVD 241

[Close]

BLAST of CsGy3G006030 vs. TAIR 10
Match: AT4G27390.1 (unknown protein; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 216.5 bits (550), Expect = 2.5e-56
Identity = 104/150 (69.33%), Postives = 130/150 (86.67%), Query Frame = 0


Query: 98  DGGDDGATARLVGNIALAAGLTYLSVTGQLGWVLDAIVSIWLVAVLVPIVGVAAFIWWAG 157
           +GGD+    R++GN+ALA GLTYLS+TGQLGW+LDAIVS+WL+ V+VPI+G+ AF WWA 
Sbjct: 87  NGGDNNGNGRILGNLALAIGLTYLSMTGQLGWILDAIVSVWLIVVIVPILGLGAFFWWAQ 146

Query: 158 RDIVQSNCPNCGNEFQIFKSTLNEELQLCPFCSQPFSVVDDKFVRDSVKFSNKTSSTFGQ 217
           RDIVQSNCPNCGNEFQIFKS +++E+QLCPFC+QPFSVVDDKFV++ VKFSN+T++ FGQ
Sbjct: 147 RDIVQSNCPNCGNEFQIFKSAMDDEVQLCPFCTQPFSVVDDKFVKEPVKFSNQTTA-FGQ 206

Query: 218 AFSDFTS-PRKGKETSGAVVDIEAEVKDVD 247
             + F+S P+KGK +S AVVDIEAEV D D
Sbjct: 207 DLNGFSSKPKKGKGSSTAVVDIEAEVTDAD 235

The following BLAST results are available for this feature:

BLAST of CsGy3G006030 vs.


Match Name	E-value	Identity	Description

BLAST of CsGy3G006030 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004149291.1	5.00e-177	100.00	uncharacterized protein LOC101205846 [Cucumis sativus] >KGN56214.1 hypothetical ...	[more]
XP_008452285.1	7.08e-162	93.90	PREDICTED: uncharacterized protein LOC103493356 [Cucumis melo] >KAA0046868.1 unc...	[more]
XP_038905451.1	7.52e-139	86.18	uncharacterized protein LOC120091477 isoform X2 [Benincasa hispida] >XP_03890545...	[more]
KAG7015466.1	1.07e-138	84.55	hypothetical protein SDJN02_23102 [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_023552443.1	1.07e-138	84.15	uncharacterized protein LOC111810103 [Cucurbita pepo subsp. pepo]	[more]

BLAST of CsGy3G006030 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L5A4	2.42e-177	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G099750 PE=4 SV=1	[more]
A0A5A7TVG5	3.43e-162	93.90	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A1S3BUA7	3.43e-162	93.90	uncharacterized protein LOC103493356 OS=Cucumis melo OX=3656 GN=LOC103493356 PE=...	[more]
A0A6J1JCT5	7.34e-139	84.62	uncharacterized protein LOC111483302 OS=Cucurbita maxima OX=3661 GN=LOC111483302...	[more]
A0A6J1EMN9	2.10e-138	84.55	uncharacterized protein LOC111435981 OS=Cucurbita moschata OX=3662 GN=LOC1114359...	[more]

BLAST of CsGy3G006030 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G27390.1	2.5e-56	69.33	unknown protein; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplas...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (Gy14) v2.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR36785	OS05G0502500 PROTEIN	coord: 9..246

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsGy3G006030.2	CsGy3G006030.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane