CsGy3G005780 (gene) Cucumber (Gy14) v2.1

Overview
NameCsGy3G005780
Typegene
OrganismCucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
DescriptionBeta-caryophyllene synthase
LocationGy14Chr3: 4805641 .. 4806462 (-)
RNA-Seq ExpressionCsGy3G005780
SyntenyCsGy3G005780
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAAAGAAAGAATTGAAAAGTTGAAAGAAGAAATAAGGATGGTGGTGATTGCTTCTGTGCAAAATCCATTGGTAAAGCTAAATTTGGTTGATTCAATCCAACGGCTGGGAGTATCTTATCATTTTGAAGATGAGATTGATCAATTCTTAGAACATATGTATGTGTCTTATAATAATTCCCTTTTATTCAGTAGCAACGATAGTGAAGATGATGATCTTCATATTTCTGCTCTTCTATTTCGACTTCTCAGGCAACATGGTTATAGGATTTCATGTGGTAAGTTAAATACACAAATATAATTGTTTTCTTATTTTTAGTTTTAAACATTATTCGAGGTCAAAGTGCAAAGAGTTAGAAACTTCCAAAATTAAGCATTTTTTAAATTCAATTAACTTAAGAACTCATCATGCGTTCTTTTTCACTCTTAATTTAAATTAAAAACAGATATATTTTTGAAGTTCATGGACAACAATGGAAAATTTAAAGAGTCATTGGTTGAGGATGAAAGAGGAATATTGAGCCTATATGAAGCATCCCATATGAGGGGGCATGGAGAAGCTTTACTTGAGGAAGCTCTTGAATTTACAACCACACATCTTAAAGCATATATTCATCTTTACTCAAATATTAATCCAAATTTTGCATCTGAAGTTAGTAATGCATTGAAATTGCCTATTAGAAAATGTGTTCCAAGAGTCAAGGCAAGAGAGTATTTTGAAATTTACCAGCAACAACCTTCTCACAATGAGACTTTGCTTACATTCTCAAAACAAACTGGACTTCAACATCTTACAAAAACATCACCAGAGGGAGATAGCTGA

mRNA sequence

ATGAAAGAAAGAATTGAAAAGTTGAAAGAAGAAATAAGGATGGTGGTGATTGCTTCTGTGCAAAATCCATTGGTAAAGCTAAATTTGGTTGATTCAATCCAACGGCTGGGAGTATCTTATCATTTTGAAGATGAGATTGATCAATTCTTAGAACATATGTATGTGTCTTATAATAATTCCCTTTTATTCAGTAGCAACGATAGTGAAGATGATGATCTTCATATTTCTGCTCTTCTATTTCGACTTCTCAGGCAACATGGTTATAGGATTTCATGTGATATATTTTTGAAGTTCATGGACAACAATGGAAAATTTAAAGAGTCATTGGTTGAGGATGAAAGAGGAATATTGAGCCTATATGAAGCATCCCATATGAGGGGGCATGGAGAAGCTTTACTTGAGGAAGCTCTTGAATTTACAACCACACATCTTAAAGCATATATTCATCTTTACTCAAATATTAATCCAAATTTTGCATCTGAAGTTAGTAATGCATTGAAATTGCCTATTAGAAAATGTGTTCCAAGAGTCAAGGCAAGAGAGTATTTTGAAATTTACCAGCAACAACCTTCTCACAATGAGACTTTGCTTACATTCTCAAAACAAACTGGACTTCAACATCTTACAAAAACATCACCAGAGGGAGATAGCTGA

Coding sequence (CDS)

ATGAAAGAAAGAATTGAAAAGTTGAAAGAAGAAATAAGGATGGTGGTGATTGCTTCTGTGCAAAATCCATTGGTAAAGCTAAATTTGGTTGATTCAATCCAACGGCTGGGAGTATCTTATCATTTTGAAGATGAGATTGATCAATTCTTAGAACATATGTATGTGTCTTATAATAATTCCCTTTTATTCAGTAGCAACGATAGTGAAGATGATGATCTTCATATTTCTGCTCTTCTATTTCGACTTCTCAGGCAACATGGTTATAGGATTTCATGTGATATATTTTTGAAGTTCATGGACAACAATGGAAAATTTAAAGAGTCATTGGTTGAGGATGAAAGAGGAATATTGAGCCTATATGAAGCATCCCATATGAGGGGGCATGGAGAAGCTTTACTTGAGGAAGCTCTTGAATTTACAACCACACATCTTAAAGCATATATTCATCTTTACTCAAATATTAATCCAAATTTTGCATCTGAAGTTAGTAATGCATTGAAATTGCCTATTAGAAAATGTGTTCCAAGAGTCAAGGCAAGAGAGTATTTTGAAATTTACCAGCAACAACCTTCTCACAATGAGACTTTGCTTACATTCTCAAAACAAACTGGACTTCAACATCTTACAAAAACATCACCAGAGGGAGATAGCTGA

Protein sequence

MKERIEKLKEEIRMVVIASVQNPLVKLNLVDSIQRLGVSYHFEDEIDQFLEHMYVSYNNSLLFSSNDSEDDDLHISALLFRLLRQHGYRISCDIFLKFMDNNGKFKESLVEDERGILSLYEASHMRGHGEALLEEALEFTTTHLKAYIHLYSNINPNFASEVSNALKLPIRKCVPRVKAREYFEIYQQQPSHNETLLTFSKQTGLQHLTKTSPEGDS*
Homology
[Close]
BLAST of CsGy3G005780 vs. ExPASy Swiss-Prot
Match: B2KSJ5 ((+)-gamma-cadinene synthase OS=Cucumis melo OX=3656 PE=1 SV=1)

HSP 1 Score: 342.0 bits (876), Expect = 4.8e-93
Identity = 170/201 (84.58%), Postives = 186/201 (92.54%), Query Frame = 0 

Query: 1   MKERIEKLKEEIRMVVIASVQNPLVKLNLVDSIQRLGVSYHFEDEIDQFLEHMYVSYNNS 60
           MKER EKLKEEIRM++IA V+N L+KLNLVDSIQRLGVSYHFEDE+D+FLEH+YVSYNNS
Sbjct: 52  MKERTEKLKEEIRMMMIAYVENQLIKLNLVDSIQRLGVSYHFEDEVDEFLEHIYVSYNNS 111

Query: 61  LLFSSNDSEDDDLHISALLFRLLRQHGYRISCDIFLKFMDNNGKFKESLVEDERGILSLY 120
           LL S+ +S  +DLHI+ALLFRLLRQ GYRISCDIFLKFMD+NGKFKESLVEDERG+LSLY
Sbjct: 112 LLLSNKNSNGEDLHITALLFRLLRQQGYRISCDIFLKFMDDNGKFKESLVEDERGLLSLY 171

Query: 121 EASHMRGHGEALLEEALEFTTTHLKAYIHLYSNINPNFASEVSNALKLPIRKCVPRVKAR 180
           EASHM GHGEALLEEALEFTTTHL+ YIH YSNINP+FASEVSNALKLPIRK VPR+KAR
Sbjct: 172 EASHMMGHGEALLEEALEFTTTHLQTYIHRYSNINPSFASEVSNALKLPIRKSVPRIKAR 231

Query: 181 EYFEIYQQQPSHNETLLTFSK 202
           EY EIYQQ PSHNETLL FSK
Sbjct: 232 EYLEIYQQHPSHNETLLEFSK 252

[Close]
BLAST of CsGy3G005780 vs. ExPASy Swiss-Prot
Match: Q6Q3H3 ((-)-germacrene D synthase OS=Vitis vinifera OX=29760 GN=VIT_19s0014g04930 PE=1 SV=1)

HSP 1 Score: 192.6 bits (488), Expect = 4.7e-48
Identity = 101/201 (50.25%), Postives = 143/201 (71.14%), Query Frame = 0 

Query: 1   MKERIEKLKEEIRMVVIASVQNPLVKLNLVDSIQRLGVSYHFEDEIDQFLEHMYVSYNNS 60
           +K+ +++LKEE+R +++A+  +   KL L+D+IQRLGV+YHFE EID+ L+HM   ++ S
Sbjct: 50  LKQHVQQLKEEVRKMLMAADDDSAQKLLLIDAIQRLGVAYHFESEIDEVLKHM---FDGS 109

Query: 61  LLFSSNDSEDDDLHISALLFRLLRQHGYRISCDIFLKFMDNNGKFKESLVEDERGILSLY 120
           ++     S ++D++ ++L FRLLRQ GY +SCD+F  F DN G FKESL  D RG+LSLY
Sbjct: 110 VV-----SAEEDVYTASLRFRLLRQQGYHVSCDLFNNFKDNEGNFKESLSSDVRGMLSLY 169

Query: 121 EASHMRGHGEALLEEALEFTTTHLKAYIHLYSNINPNFASEVSNALKLPIRKCVPRVKAR 180
           EA+H R HGE +L+EAL FTTTHL++     SN     A +V +ALK PIRK +PR++AR
Sbjct: 170 EATHFRVHGEDILDEALAFTTTHLQSATKHSSN---PLAEQVVHALKQPIRKGLPRLEAR 229

Query: 181 EYFEIYQQQPSHNETLLTFSK 202
            YF +YQ   SHN+ LL  +K
Sbjct: 230 HYFSVYQADDSHNKALLKLAK 239

[Close]
BLAST of CsGy3G005780 vs. ExPASy Swiss-Prot
Match: B9SCB6 (Probable terpene synthase 2 OS=Ricinus communis OX=3988 GN=TPS2 PE=3 SV=1)

HSP 1 Score: 190.7 bits (483), Expect = 1.8e-47
Identity = 98/201 (48.76%), Postives = 142/201 (70.65%), Query Frame = 0 

Query: 1   MKERIEKLKEEIRMVVIASVQNPLVKLNLVDSIQRLGVSYHFEDEIDQFLEHMYVSYNNS 60
           M++++E+LKEE++  +IAS   P   LNL+D +QRLGVSYHFE EI++ L+ +       
Sbjct: 45  MEQQVERLKEEVKK-MIASADEPSQILNLIDLLQRLGVSYHFEKEIEEALQQV------- 104

Query: 61  LLFSSNDSEDDDLHISALLFRLLRQHGYRISCDIFLKFMDNNGKFKESLVEDERGILSLY 120
           L  +S+  +DDDLH  AL FRLLR+ G  +SCD+F KF D NG F ++L  D +G+LSLY
Sbjct: 105 LNMNSDSDKDDDLHSVALRFRLLREQGLNVSCDVFNKFRDRNGHFIQTLKTDLQGMLSLY 164

Query: 121 EASHMRGHGEALLEEALEFTTTHLKAYIHLYSNINPNFASEVSNALKLPIRKCVPRVKAR 180
           EA+H R HGE +L++AL FTTT+L++ +    N++P  A+++S  L+ P+RK + RV+AR
Sbjct: 165 EAAHFRVHGEGILDDALAFTTTYLESIV---PNLSPPLAAQISRTLRQPLRKSLARVEAR 224

Query: 181 EYFEIYQQQPSHNETLLTFSK 202
            +  IYQ+  SHNE LLTF+K
Sbjct: 225 HFISIYQEDTSHNEVLLTFAK 234

[Close]
BLAST of CsGy3G005780 vs. ExPASy Swiss-Prot
Match: F6M8H4 (Probable sesquiterpene synthase OS=Santalum album OX=35974 GN=SesquiTPS1 PE=3 SV=1)

HSP 1 Score: 186.0 bits (471), Expect = 4.4e-46
Identity = 96/202 (47.52%), Postives = 144/202 (71.29%), Query Frame = 0 

Query: 2   KER-IEKLKEEIRMVVIASVQNPLVKLNLVDSIQRLGVSYHFEDEIDQFLEHMYV-SYNN 61
           KER +E+LKE++R  + A+V  PL + N++D+ QRLG++YHFE+EI++ LEH+Y+ +Y  
Sbjct: 47  KERQVEELKEQVRRELAATVDKPLQQQNIIDATQRLGIAYHFENEIEESLEHIYLHTYVE 106

Query: 62  SLLFSSNDSEDDDLHISALLFRLLRQHGYRISCDIFLKFMDNNGKFKESLVEDERGILSL 121
           +  F  +    DDL+  AL FRLLRQ+GYR+SCD+F KF DN G FK +L+ED +G+L L
Sbjct: 107 NTCFEGS----DDLYSVALWFRLLRQNGYRVSCDVFNKFRDNEGNFKNNLMEDAKGLLEL 166

Query: 122 YEASHMRGHGEALLEEALEFTTTHLKAYIHLYSNINPNFASEVSNALKLPIRKCVPRVKA 181
           YEA+H+  HGE +L++ALEFT T L++ +   S++N   A +V +AL  P+ K +PR++A
Sbjct: 167 YEATHLSVHGEEMLDDALEFTKTRLESVV---SHLNYPLAEQVRHALYQPLHKGLPRLEA 226

Query: 182 REYFEIYQQQPSHNETLLTFSK 202
             +F IY+   SHN+ LL  +K
Sbjct: 227 VYFFRIYEAHASHNKALLKLAK 241

[Close]
BLAST of CsGy3G005780 vs. ExPASy Swiss-Prot
Match: O49853 ((+)-delta-cadinene synthase isozyme C2 OS=Gossypium arboreum OX=29729 GN=CAD1-C2 PE=2 SV=1)

HSP 1 Score: 183.7 bits (465), Expect = 2.2e-45
Identity = 96/200 (48.00%), Postives = 140/200 (70.00%), Query Frame = 0 

Query: 2   KERIEKLKEEIRMVVIASVQNPLVKLNLVDSIQRLGVSYHFEDEIDQFLEHMYVSYNNSL 61
           ++R ++LKEE+R +++A + N   KL  +DS+QRLGVSYHF  EI+  LE++Y  +NN  
Sbjct: 49  EKRHQQLKEEVRKMIVAPMANSTQKLAFIDSVQRLGVSYHFTKEIEDELENIY--HNN-- 108

Query: 62  LFSSNDSEDDDLHISALLFRLLRQHGYRISCDIFLKFMDNNGKFKESLVEDERGILSLYE 121
               ND+E +DL+ ++L FRLLR+HGY +SCD+F KF D  G FK S+  D +G+L LY+
Sbjct: 109 ----NDAE-NDLYTTSLRFRLLREHGYNVSCDVFNKFKDEQGNFKSSVTSDVQGLLELYQ 168

Query: 122 ASHMRGHGEALLEEALEFTTTHLKAYIHLYSNINPNFASEVSNALKLPIRKCVPRVKARE 181
           AS++R HGE +L+EA+ FTT HL   +   S+++   + EVS+ALK  IR+ +PRV+AR 
Sbjct: 169 ASYLRVHGEDILDEAISFTTNHLSLAV---SSLDHPLSEEVSHALKQSIRRGLPRVEARH 228

Query: 182 YFEIYQQQPSHNETLLTFSK 202
           Y  +YQ   SHN+ LL F+K
Sbjct: 229 YLSVYQDIESHNKALLEFAK 236

[Close]
BLAST of CsGy3G005780 vs. NCBI nr
Match: KAE8650156.1 (hypothetical protein Csa_010514 [Cucumis sativus])

HSP 1 Score: 388 bits (996), Expect = 6.21e-133
Identity = 197/204 (96.57%), Postives = 197/204 (96.57%), Query Frame = 0 

Query: 14  MVVIASVQNPLVKLNLVDSIQRLGVSYHFEDEIDQFLEHMYVSYNNSLLFSSNDSEDDDL 73
           M VIASVQNPLVKLNLVDSIQRLGVSYHFEDEIDQFLEHMYVSYNNSLLFSSNDSEDDDL
Sbjct: 1   MEVIASVQNPLVKLNLVDSIQRLGVSYHFEDEIDQFLEHMYVSYNNSLLFSSNDSEDDDL 60

Query: 74  HISALLFRLLRQHGYRISCDIFLKFMDNNGKFKESLVEDERGILSLYEASHMRGHGEALL 133
                LFRLLRQHGYRISCDIFLKFMDNNGKFKESLVEDERGILSLYEASHMRGHGEALL
Sbjct: 61  -----LFRLLRQHGYRISCDIFLKFMDNNGKFKESLVEDERGILSLYEASHMRGHGEALL 120

Query: 134 EEALEFTTTHLKAYIHLYSNINPNFASEVSNALKLPIRKCVPRVKAREYFEIYQQQPSHN 193
           EEALEFTTTHLKAYIHLYSNINPNFASEVSNALK PIRKCVPRVKAREYFEIYQQQPSHN
Sbjct: 121 EEALEFTTTHLKAYIHLYSNINPNFASEVSNALKFPIRKCVPRVKAREYFEIYQQQPSHN 180

Query: 194 ETLLTFSKQTGLQHLTKTSPEGDS 217
           ETLLTFSKQTGLQHLTKTSPEGDS
Sbjct: 181 ETLLTFSKQTGLQHLTKTSPEGDS 199

[Close]
BLAST of CsGy3G005780 vs. NCBI nr
Match: NP_001292628.1 ((+)-gamma-cadinene synthase [Cucumis sativus] >AAU05952.1 beta-caryophyllene synthase [Cucumis sativus])

HSP 1 Score: 394 bits (1013), Expect = 1.20e-132
Identity = 199/201 (99.00%), Postives = 201/201 (100.00%), Query Frame = 0 

Query: 1   MKERIEKLKEEIRMVVIASVQNPLVKLNLVDSIQRLGVSYHFEDEIDQFLEHMYVSYNNS 60
           MKERIEKLKEEIRM+VIASVQNPLVKLNLVDSIQRLGVSYHFEDEIDQFLEHMYVSYNNS
Sbjct: 49  MKERIEKLKEEIRMMVIASVQNPLVKLNLVDSIQRLGVSYHFEDEIDQFLEHMYVSYNNS 108

Query: 61  LLFSSNDSEDDDLHISALLFRLLRQHGYRISCDIFLKFMDNNGKFKESLVEDERGILSLY 120
           LLFSSNDS+DDDLHISALLFRLLRQHGYRISCDIFLKFMDNNGKFKESLVEDERGILSLY
Sbjct: 109 LLFSSNDSQDDDLHISALLFRLLRQHGYRISCDIFLKFMDNNGKFKESLVEDERGILSLY 168

Query: 121 EASHMRGHGEALLEEALEFTTTHLKAYIHLYSNINPNFASEVSNALKLPIRKCVPRVKAR 180
           EASHMRGHGEALLEEALEFTTTHLKAYIHLYSNINPNFASEVSNALKLPIRKCVPRVKAR
Sbjct: 169 EASHMRGHGEALLEEALEFTTTHLKAYIHLYSNINPNFASEVSNALKLPIRKCVPRVKAR 228

Query: 181 EYFEIYQQQPSHNETLLTFSK 201
           EYFEIYQQQPSHNETLLTFSK
Sbjct: 229 EYFEIYQQQPSHNETLLTFSK 249

[Close]
BLAST of CsGy3G005780 vs. NCBI nr
Match: KAE8650158.1 (hypothetical protein Csa_009547 [Cucumis sativus])

HSP 1 Score: 394 bits (1013), Expect = 1.20e-132
Identity = 199/201 (99.00%), Postives = 201/201 (100.00%), Query Frame = 0 

Query: 1   MKERIEKLKEEIRMVVIASVQNPLVKLNLVDSIQRLGVSYHFEDEIDQFLEHMYVSYNNS 60
           MKERIEKLKEEIRM+VIASVQNPLVKLNLVDSIQRLGVSYHFEDEIDQFLEHMYVSYNNS
Sbjct: 49  MKERIEKLKEEIRMMVIASVQNPLVKLNLVDSIQRLGVSYHFEDEIDQFLEHMYVSYNNS 108

Query: 61  LLFSSNDSEDDDLHISALLFRLLRQHGYRISCDIFLKFMDNNGKFKESLVEDERGILSLY 120
           LLFSSNDS+DDDLHISALLFRLLRQHGYRISCDIFLKFMDNNGKFKESLVEDERGILSLY
Sbjct: 109 LLFSSNDSQDDDLHISALLFRLLRQHGYRISCDIFLKFMDNNGKFKESLVEDERGILSLY 168

Query: 121 EASHMRGHGEALLEEALEFTTTHLKAYIHLYSNINPNFASEVSNALKLPIRKCVPRVKAR 180
           EASHMRGHGEALLEEALEFTTTHLKAYIHLYSNINPNFASEVSNALKLPIRKCVPRVKAR
Sbjct: 169 EASHMRGHGEALLEEALEFTTTHLKAYIHLYSNINPNFASEVSNALKLPIRKCVPRVKAR 228

Query: 181 EYFEIYQQQPSHNETLLTFSK 201
           EYFEIYQQQPSHNETLLTFSK
Sbjct: 229 EYFEIYQQQPSHNETLLTFSK 249

[Close]
BLAST of CsGy3G005780 vs. NCBI nr
Match: XP_011650545.2 ((+)-gamma-cadinene synthase [Cucumis sativus] >KAE8650159.1 hypothetical protein Csa_010773 [Cucumis sativus])

HSP 1 Score: 360 bits (924), Expect = 2.55e-119
Identity = 179/199 (89.95%), Postives = 189/199 (94.97%), Query Frame = 0 

Query: 3   ERIEKLKEEIRMVVIASVQNPLVKLNLVDSIQRLGVSYHFEDEIDQFLEHMYVSYNNSLL 62
           ERIEKLKEEIRM+V AS++NPL  LNLVDSIQRLGVSYHFEDEI+QFLEH+YVSYNNSLL
Sbjct: 41  ERIEKLKEEIRMMVTASMENPLANLNLVDSIQRLGVSYHFEDEIEQFLEHIYVSYNNSLL 100

Query: 63  FSSNDSEDDDLHISALLFRLLRQHGYRISCDIFLKFMDNNGKFKESLVEDERGILSLYEA 122
            S+ DSEDDDLH +ALLFRLLRQ GYRISCDIFLKFMD NGKFKESLVEDERGILSLYEA
Sbjct: 101 LSNKDSEDDDLHFTALLFRLLRQQGYRISCDIFLKFMDKNGKFKESLVEDERGILSLYEA 160

Query: 123 SHMRGHGEALLEEALEFTTTHLKAYIHLYSNINPNFASEVSNALKLPIRKCVPRVKAREY 182
           SHMRGHGEALLEEALEFTTTHLKAYIHLYSNINPNFASEVSNALKLPIRKCVPR+KAREY
Sbjct: 161 SHMRGHGEALLEEALEFTTTHLKAYIHLYSNINPNFASEVSNALKLPIRKCVPRIKAREY 220

Query: 183 FEIYQQQPSHNETLLTFSK 201
           F+IYQQ PSH+ETLL FSK
Sbjct: 221 FQIYQQHPSHSETLLEFSK 239

[Close]
BLAST of CsGy3G005780 vs. NCBI nr
Match: NP_001284382.1 ((+)-gamma-cadinene synthase [Cucumis melo] >B2KSJ5.1 RecName: Full=(+)-gamma-cadinene synthase; Short=CmTpsNY; AltName: Full=(+)-delta-cadinene synthase [Cucumis melo] >ABX83200.1 terpene synthase [Cucumis melo])

HSP 1 Score: 341 bits (875), Expect = 9.07e-112
Identity = 170/201 (84.58%), Postives = 186/201 (92.54%), Query Frame = 0 

Query: 1   MKERIEKLKEEIRMVVIASVQNPLVKLNLVDSIQRLGVSYHFEDEIDQFLEHMYVSYNNS 60
           MKER EKLKEEIRM++IA V+N L+KLNLVDSIQRLGVSYHFEDE+D+FLEH+YVSYNNS
Sbjct: 52  MKERTEKLKEEIRMMMIAYVENQLIKLNLVDSIQRLGVSYHFEDEVDEFLEHIYVSYNNS 111

Query: 61  LLFSSNDSEDDDLHISALLFRLLRQHGYRISCDIFLKFMDNNGKFKESLVEDERGILSLY 120
           LL S+ +S  +DLHI+ALLFRLLRQ GYRISCDIFLKFMD+NGKFKESLVEDERG+LSLY
Sbjct: 112 LLLSNKNSNGEDLHITALLFRLLRQQGYRISCDIFLKFMDDNGKFKESLVEDERGLLSLY 171

Query: 121 EASHMRGHGEALLEEALEFTTTHLKAYIHLYSNINPNFASEVSNALKLPIRKCVPRVKAR 180
           EASHM GHGEALLEEALEFTTTHL+ YIH YSNINP+FASEVSNALKLPIRK VPR+KAR
Sbjct: 172 EASHMMGHGEALLEEALEFTTTHLQTYIHRYSNINPSFASEVSNALKLPIRKSVPRIKAR 231

Query: 181 EYFEIYQQQPSHNETLLTFSK 201
           EY EIYQQ PSHNETLL FSK
Sbjct: 232 EYLEIYQQHPSHNETLLEFSK 252

[Close]
BLAST of CsGy3G005780 vs. ExPASy TrEMBL
Match: Q66PX8 (Beta-caryophyllene synthase OS=Cucumis sativus OX=3659 PE=2 SV=1)

HSP 1 Score: 394 bits (1013), Expect = 5.82e-133
Identity = 199/201 (99.00%), Postives = 201/201 (100.00%), Query Frame = 0 

Query: 1   MKERIEKLKEEIRMVVIASVQNPLVKLNLVDSIQRLGVSYHFEDEIDQFLEHMYVSYNNS 60
           MKERIEKLKEEIRM+VIASVQNPLVKLNLVDSIQRLGVSYHFEDEIDQFLEHMYVSYNNS
Sbjct: 49  MKERIEKLKEEIRMMVIASVQNPLVKLNLVDSIQRLGVSYHFEDEIDQFLEHMYVSYNNS 108

Query: 61  LLFSSNDSEDDDLHISALLFRLLRQHGYRISCDIFLKFMDNNGKFKESLVEDERGILSLY 120
           LLFSSNDS+DDDLHISALLFRLLRQHGYRISCDIFLKFMDNNGKFKESLVEDERGILSLY
Sbjct: 109 LLFSSNDSQDDDLHISALLFRLLRQHGYRISCDIFLKFMDNNGKFKESLVEDERGILSLY 168

Query: 121 EASHMRGHGEALLEEALEFTTTHLKAYIHLYSNINPNFASEVSNALKLPIRKCVPRVKAR 180
           EASHMRGHGEALLEEALEFTTTHLKAYIHLYSNINPNFASEVSNALKLPIRKCVPRVKAR
Sbjct: 169 EASHMRGHGEALLEEALEFTTTHLKAYIHLYSNINPNFASEVSNALKLPIRKCVPRVKAR 228

Query: 181 EYFEIYQQQPSHNETLLTFSK 201
           EYFEIYQQQPSHNETLLTFSK
Sbjct: 229 EYFEIYQQQPSHNETLLTFSK 249

[Close]
BLAST of CsGy3G005780 vs. ExPASy TrEMBL
Match: A0A0A0L579 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G097040 PE=4 SV=1)

HSP 1 Score: 389 bits (999), Expect = 7.61e-131
Identity = 196/201 (97.51%), Postives = 200/201 (99.50%), Query Frame = 0 

Query: 1   MKERIEKLKEEIRMVVIASVQNPLVKLNLVDSIQRLGVSYHFEDEIDQFLEHMYVSYNNS 60
           MKERIEKLKEEIRM+VIASVQNPLVKLNLVDSIQRLGVSYHFEDEI+QF EH+YVSYNNS
Sbjct: 49  MKERIEKLKEEIRMMVIASVQNPLVKLNLVDSIQRLGVSYHFEDEIEQFSEHIYVSYNNS 108

Query: 61  LLFSSNDSEDDDLHISALLFRLLRQHGYRISCDIFLKFMDNNGKFKESLVEDERGILSLY 120
           LLFSSNDS+DDDLHISALLFRLLRQHGYRISCDIFLKFMDNNGKFKESLVEDERGILSLY
Sbjct: 109 LLFSSNDSQDDDLHISALLFRLLRQHGYRISCDIFLKFMDNNGKFKESLVEDERGILSLY 168

Query: 121 EASHMRGHGEALLEEALEFTTTHLKAYIHLYSNINPNFASEVSNALKLPIRKCVPRVKAR 180
           EASHMRGHGEALLEEALEFTTTHLKAYIHLYSNINPNFASEVSNALKLPIRKCVPRVKAR
Sbjct: 169 EASHMRGHGEALLEEALEFTTTHLKAYIHLYSNINPNFASEVSNALKLPIRKCVPRVKAR 228

Query: 181 EYFEIYQQQPSHNETLLTFSK 201
           EYFEIYQQQPSHNETLLTFSK
Sbjct: 229 EYFEIYQQQPSHNETLLTFSK 249

[Close]
BLAST of CsGy3G005780 vs. ExPASy TrEMBL
Match: A0A0A0L2I8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G097540 PE=4 SV=1)

HSP 1 Score: 360 bits (923), Expect = 1.75e-119
Identity = 179/199 (89.95%), Postives = 190/199 (95.48%), Query Frame = 0 

Query: 3   ERIEKLKEEIRMVVIASVQNPLVKLNLVDSIQRLGVSYHFEDEIDQFLEHMYVSYNNSLL 62
           ERIEKLKEEIRM+V AS++NPL  LNLVDSIQRLGVSY+FEDEI+QFLEH+YVSYNNSLL
Sbjct: 41  ERIEKLKEEIRMMVTASMENPLANLNLVDSIQRLGVSYNFEDEIEQFLEHIYVSYNNSLL 100

Query: 63  FSSNDSEDDDLHISALLFRLLRQHGYRISCDIFLKFMDNNGKFKESLVEDERGILSLYEA 122
            S+ DSEDDDLH +ALLFRLLRQ GYRISCDIFLKFMDNNGKFKESLVEDERGILSLYEA
Sbjct: 101 LSNKDSEDDDLHFTALLFRLLRQQGYRISCDIFLKFMDNNGKFKESLVEDERGILSLYEA 160

Query: 123 SHMRGHGEALLEEALEFTTTHLKAYIHLYSNINPNFASEVSNALKLPIRKCVPRVKAREY 182
           SHMRGHGEALLEEALEFTTTHLKAYIHLYSNINPNFASEVSNALKLPIRKCVPR+KAREY
Sbjct: 161 SHMRGHGEALLEEALEFTTTHLKAYIHLYSNINPNFASEVSNALKLPIRKCVPRIKAREY 220

Query: 183 FEIYQQQPSHNETLLTFSK 201
           F+IYQQ PSH+ETLL FSK
Sbjct: 221 FQIYQQHPSHSETLLEFSK 239

[Close]
BLAST of CsGy3G005780 vs. ExPASy TrEMBL
Match: A0A1S4DZR2 ((+)-gamma-cadinene synthase-like OS=Cucumis melo OX=3656 GN=LOC103493390 PE=4 SV=1)

HSP 1 Score: 345 bits (884), Expect = 1.88e-113
Identity = 175/201 (87.06%), Postives = 187/201 (93.03%), Query Frame = 0 

Query: 1   MKERIEKLKEEIRMVVIASVQNPLVKLNLVDSIQRLGVSYHFEDEIDQFLEHMYVSYNNS 60
           MKER EKLKEEIRM++IA V+N LVKLNLVDSIQRLGVSYHFEDEID+FLEH+YVSYNNS
Sbjct: 52  MKERTEKLKEEIRMMMIAYVENQLVKLNLVDSIQRLGVSYHFEDEIDEFLEHIYVSYNNS 111

Query: 61  LLFSSNDSEDDDLHISALLFRLLRQHGYRISCDIFLKFMDNNGKFKESLVEDERGILSLY 120
           LL S+ DSE +DLHI+ALLFRLLRQ GYRISCDIFLKFMD+NGKFKESLVEDERGILSLY
Sbjct: 112 LLLSNKDSEGEDLHITALLFRLLRQQGYRISCDIFLKFMDDNGKFKESLVEDERGILSLY 171

Query: 121 EASHMRGHGEALLEEALEFTTTHLKAYIHLYSNINPNFASEVSNALKLPIRKCVPRVKAR 180
           EASHM  HGEALLEEALEFTTTHL+ YIH YSNINP+FASEVSNALKLPIRK VPR+KAR
Sbjct: 172 EASHMMVHGEALLEEALEFTTTHLQTYIHRYSNINPSFASEVSNALKLPIRKGVPRIKAR 231

Query: 181 EYFEIYQQQPSHNETLLTFSK 201
           EY EIYQQ PSHNETLLTFSK
Sbjct: 232 EYLEIYQQHPSHNETLLTFSK 252

[Close]
BLAST of CsGy3G005780 vs. ExPASy TrEMBL
Match: A0A1S2X8Q6 ((+)-gamma-cadinene synthase OS=Cucumis melo OX=3656 GN=TPS PE=4 SV=1)

HSP 1 Score: 341 bits (875), Expect = 4.39e-112
Identity = 170/201 (84.58%), Postives = 186/201 (92.54%), Query Frame = 0 

Query: 1   MKERIEKLKEEIRMVVIASVQNPLVKLNLVDSIQRLGVSYHFEDEIDQFLEHMYVSYNNS 60
           MKER EKLKEEIRM++IA V+N L+KLNLVDSIQRLGVSYHFEDE+D+FLEH+YVSYNNS
Sbjct: 52  MKERTEKLKEEIRMMMIAYVENQLIKLNLVDSIQRLGVSYHFEDEVDEFLEHIYVSYNNS 111

Query: 61  LLFSSNDSEDDDLHISALLFRLLRQHGYRISCDIFLKFMDNNGKFKESLVEDERGILSLY 120
           LL S+ +S  +DLHI+ALLFRLLRQ GYRISCDIFLKFMD+NGKFKESLVEDERG+LSLY
Sbjct: 112 LLLSNKNSNGEDLHITALLFRLLRQQGYRISCDIFLKFMDDNGKFKESLVEDERGLLSLY 171

Query: 121 EASHMRGHGEALLEEALEFTTTHLKAYIHLYSNINPNFASEVSNALKLPIRKCVPRVKAR 180
           EASHM GHGEALLEEALEFTTTHL+ YIH YSNINP+FASEVSNALKLPIRK VPR+KAR
Sbjct: 172 EASHMMGHGEALLEEALEFTTTHLQTYIHRYSNINPSFASEVSNALKLPIRKSVPRIKAR 231

Query: 181 EYFEIYQQQPSHNETLLTFSK 201
           EY EIYQQ PSHNETLL FSK
Sbjct: 232 EYLEIYQQHPSHNETLLEFSK 252

[Close]
BLAST of CsGy3G005780 vs. TAIR 10
Match: AT5G23960.1 (terpene synthase 21 )

HSP 1 Score: 142.5 bits (358), Expect = 4.0e-34
Identity = 76/200 (38.00%), Postives = 122/200 (61.00%), Query Frame = 0 

Query: 2   KERIEKLKEEIRMVVIASVQNPLVKLNLVDSIQRLGVSYHFEDEIDQFLEHMYVSYNNSL 61
           KE+   LKE ++   ++S  NP+  +  +D++ RLGVSYHFE +I + L+  +   +   
Sbjct: 35  KEKHSTLKEAVKEAFMSSKANPIENIKFIDALCRLGVSYHFEKDIVEQLDKSFDCLDFPQ 94

Query: 62  LFSSNDSEDDDLHISALLFRLLRQHGYRISCDIFLKFMDNNGKFKESLVEDERGILSLYE 121
           +      E  DL+   ++F++ RQ G+++S D+F KF D NGKFK  LV D  G+LSLYE
Sbjct: 95  MVR---QEGCDLYTVGIIFQVFRQFGFKLSADVFEKFKDENGKFKGHLVTDAYGMLSLYE 154

Query: 122 ASHMRGHGEALLEEALEFTTTHLKAYIHLYSNINPNFASEVSNALKLPIRKCVPRVKARE 181
           A+    HGE +++EAL F+ +HL+    + S  +P+ A  + NALK P  K + R++ R+
Sbjct: 155 AAQWGTHGEDIIDEALAFSRSHLE---EISSRSSPHLAIRIKNALKHPYHKGISRIETRQ 214

Query: 182 YFEIYQQQPSHNETLLTFSK 202
           Y   Y+++ S + TLL F+K
Sbjct: 215 YISYYEEEESCDPTLLEFAK 228

[Close]
BLAST of CsGy3G005780 vs. TAIR 10
Match: AT5G23960.2 (terpene synthase 21 )

HSP 1 Score: 142.5 bits (358), Expect = 4.0e-34
Identity = 76/200 (38.00%), Postives = 122/200 (61.00%), Query Frame = 0 

Query: 2   KERIEKLKEEIRMVVIASVQNPLVKLNLVDSIQRLGVSYHFEDEIDQFLEHMYVSYNNSL 61
           KE+   LKE ++   ++S  NP+  +  +D++ RLGVSYHFE +I + L+  +   +   
Sbjct: 35  KEKHSTLKEAVKEAFMSSKANPIENIKFIDALCRLGVSYHFEKDIVEQLDKSFDCLDFPQ 94

Query: 62  LFSSNDSEDDDLHISALLFRLLRQHGYRISCDIFLKFMDNNGKFKESLVEDERGILSLYE 121
           +      E  DL+   ++F++ RQ G+++S D+F KF D NGKFK  LV D  G+LSLYE
Sbjct: 95  MVR---QEGCDLYTVGIIFQVFRQFGFKLSADVFEKFKDENGKFKGHLVTDAYGMLSLYE 154

Query: 122 ASHMRGHGEALLEEALEFTTTHLKAYIHLYSNINPNFASEVSNALKLPIRKCVPRVKARE 181
           A+    HGE +++EAL F+ +HL+    + S  +P+ A  + NALK P  K + R++ R+
Sbjct: 155 AAQWGTHGEDIIDEALAFSRSHLE---EISSRSSPHLAIRIKNALKHPYHKGISRIETRQ 214

Query: 182 YFEIYQQQPSHNETLLTFSK 202
           Y   Y+++ S + TLL F+K
Sbjct: 215 YISYYEEEESCDPTLLEFAK 228

[Close]
BLAST of CsGy3G005780 vs. TAIR 10
Match: AT3G14540.1 (Terpenoid cyclases/Protein prenyltransferases superfamily protein )

HSP 1 Score: 126.7 bits (317), Expect = 2.3e-29
Identity = 66/202 (32.67%), Postives = 119/202 (58.91%), Query Frame = 0 

Query: 1   MKERIEKLKEEIRMVVIASVQNPLVKLNLVDSIQRLGVSYHFEDEIDQFLEHMYVSYNNS 60
           ++  IE +K  ++ ++++S  +   K+ L+  +  LG SYHF+ EI   L+H +   +  
Sbjct: 87  LEREIETMKPLVKDMLMSSQSSDKEKIRLIHLLVSLGSSYHFDKEIQDILKHSFTKLDGI 146

Query: 61  LLFSSNDSEDDDLHISALLFRLLRQHGYRISCDIFLKFMDNNGKFKESLVEDERGILSLY 120
           ++      E+DDL   +++F + R +G+++SCD F +F   +G+FKESL +D RG+L L+
Sbjct: 147 IV------EEDDLETISIMFEVFRLYGHKMSCDAFDRFRGGDGRFKESLAKDVRGMLQLF 206

Query: 121 EASHMRGHGEALLEEALEFTTTHLKAYIH-LYSNINPNFASEVSNALKLPIRKCVPRVKA 180
           E +H+    E +++EAL FT  HL++      S+ +P+    + N+L +P    +  + A
Sbjct: 207 EVAHLGTLSEDIMDEALRFTRNHLESLTSGNVSSASPHILKHIQNSLYIPRYCNIEVLVA 266

Query: 181 REYFEIYQQQPSHNETLLTFSK 202
           REY   Y+Q+  +NE LL F+K
Sbjct: 267 REYISYYEQEEGYNEILLKFAK 282

[Close]
BLAST of CsGy3G005780 vs. TAIR 10
Match: AT4G15870.1 (terpene synthase 1 )

HSP 1 Score: 126.7 bits (317), Expect = 2.3e-29
Identity = 70/204 (34.31%), Postives = 121/204 (59.31%), Query Frame = 0 

Query: 1   MKERIEKLKEEIRMVVI---ASVQNPLVKLNLVDSIQRLGVSYHFEDEIDQFLEHMYVSY 60
           + + IE+LK E+  +++    S+++   ++  +  +  LGV++HFEDEI+Q LE  +   
Sbjct: 94  LAQEIERLKPEVGEMLMFSSKSIESTKKRILFIYMLVSLGVAFHFEDEIEQSLEEGFEKI 153

Query: 61  NNSLLFSSNDSEDDDLHISALLFRLLRQHGYRISCDIFLKFMDNNGKFKESLVEDERGIL 120
              +      + +DDL+  +++F + R +GY +S D+F +F   N KF ES+  D +G++
Sbjct: 154 QEMI------AGEDDLYTISIMFWVFRTYGYNMSTDVFKRFKGENEKFMESITSDVKGMV 213

Query: 121 SLYEASHMRGHGEALLEEALEFTTTHLKAYIHLYSNINPNFASEVSNALKLPIRKCVPRV 180
           SLYEA+H+R   E +LEEAL FTT +L++     ++ +P+    + NAL +P       +
Sbjct: 214 SLYEAAHLRTTREDILEEALSFTTRNLESLARAGAS-SPHILMRIRNALCMPQHYNAEMI 273

Query: 181 KAREYFEIYQQQPSHNETLLTFSK 202
            AREY   Y+Q+  HN+ LL F+K
Sbjct: 274 FAREYISFYEQEEDHNKMLLRFAK 290

[Close]
BLAST of CsGy3G005780 vs. TAIR 10
Match: AT5G44630.1 (Terpenoid cyclases/Protein prenyltransferases superfamily protein )

HSP 1 Score: 125.2 bits (313), Expect = 6.6e-29
Identity = 70/208 (33.65%), Postives = 120/208 (57.69%), Query Frame = 0 

Query: 1   MKERIEKLKEEIRMVVIAS-------VQNPLVKLNLVDSIQRLGVSYHFEDEIDQFLEHM 60
           ++  IE LK ++R  +  S       ++  ++ ++ +DS   LG+SYHFE EI++ L+H 
Sbjct: 40  LEREIEVLKPKVRENIFVSSSTDKDAMKKTILSIHFLDS---LGLSYHFEKEIEESLKHA 99

Query: 61  YVSYNNSLLFSSNDSEDDDLHISALLFRLLRQHGYRISCDIFLKFMDNNGKFKESLVEDE 120
           +    + +      ++++ LH  + +FR+ R +GY +S D+F  F  ++GKFKESL+ED 
Sbjct: 100 FEKIEDLI------ADENKLHTISTIFRVFRTYGYYMSSDVFKIFKGDDGKFKESLIEDV 159

Query: 121 RGILSLYEASHMRGHGEALLEEALEFTTTHLKAYIHLYSNINPNFASEVSNALKLPIRKC 180
           +G+LS YEA H     + +L+EAL FT  HL++         P+ +  + NAL +P  + 
Sbjct: 160 KGMLSFYEAVHFGTTTDHILDEALSFTLNHLESLATGRRASPPHISKLIQNALHIPQHRN 219

Query: 181 VPRVKAREYFEIYQQQPSHNETLLTFSK 202
           +  + AREY   Y+ +  H+ETLL  +K
Sbjct: 220 IQALVAREYISFYEHEEDHDETLLKLAK 238

The following BLAST results are available for this feature:
BLAST of CsGy3G005780 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
B2KSJ54.8e-9384.58(+)-gamma-cadinene synthase OS=Cucumis melo OX=3656 PE=1 SV=1[more]
Q6Q3H34.7e-4850.25(-)-germacrene D synthase OS=Vitis vinifera OX=29760 GN=VIT_19s0014g04930 PE=1 S... [more]
B9SCB61.8e-4748.76Probable terpene synthase 2 OS=Ricinus communis OX=3988 GN=TPS2 PE=3 SV=1[more]
F6M8H44.4e-4647.52Probable sesquiterpene synthase OS=Santalum album OX=35974 GN=SesquiTPS1 PE=3 SV... [more]
O498532.2e-4548.00(+)-delta-cadinene synthase isozyme C2 OS=Gossypium arboreum OX=29729 GN=CAD1-C2... [more]
BLAST of CsGy3G005780 vs. NCBI nr
Match NameE-valueIdentityDescription
KAE8650156.16.21e-13396.57hypothetical protein Csa_010514 [Cucumis sativus][more]
NP_001292628.11.20e-13299.00(+)-gamma-cadinene synthase [Cucumis sativus] >AAU05952.1 beta-caryophyllene syn... [more]
KAE8650158.11.20e-13299.00hypothetical protein Csa_009547 [Cucumis sativus][more]
XP_011650545.22.55e-11989.95(+)-gamma-cadinene synthase [Cucumis sativus] >KAE8650159.1 hypothetical protein... [more]
NP_001284382.19.07e-11284.58(+)-gamma-cadinene synthase [Cucumis melo] >B2KSJ5.1 RecName: Full=(+)-gamma-cad... [more]
BLAST of CsGy3G005780 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Q66PX85.82e-13399.00Beta-caryophyllene synthase OS=Cucumis sativus OX=3659 PE=2 SV=1[more]
A0A0A0L5797.61e-13197.51Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G097040 PE=4 SV=1[more]
A0A0A0L2I81.75e-11989.95Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G097540 PE=4 SV=1[more]
A0A1S4DZR21.88e-11387.06(+)-gamma-cadinene synthase-like OS=Cucumis melo OX=3656 GN=LOC103493390 PE=4 SV... [more]
A0A1S2X8Q64.39e-11284.58(+)-gamma-cadinene synthase OS=Cucumis melo OX=3656 GN=TPS PE=4 SV=1[more]
BLAST of CsGy3G005780 vs. TAIR 10
Match NameE-valueIdentityDescription
AT5G23960.14.0e-3438.00terpene synthase 21 [more]
AT5G23960.24.0e-3438.00terpene synthase 21 [more]
AT3G14540.12.3e-2932.67Terpenoid cyclases/Protein prenyltransferases superfamily protein [more]
AT4G15870.12.3e-2934.31terpene synthase 1 [more]
AT5G44630.16.6e-2933.65Terpenoid cyclases/Protein prenyltransferases superfamily protein [more]
InterPro
Analysis Name: InterPro Annotations of Cucumber (Gy14) v2.1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001906Terpene synthase, N-terminal domainPFAMPF01397Terpene_synthcoord: 1..166
e-value: 5.1E-53
score: 179.6
IPR036965Terpene synthase, N-terminal domain superfamilyGENE3D1.50.10.130coord: 20..191
e-value: 4.4E-70
score: 238.4
IPR008949Isoprenoid synthase domain superfamilyGENE3D1.10.600.10Farnesyl Diphosphate Synthasecoord: 2..201
e-value: 4.4E-70
score: 238.4
NoneNo IPR availablePANTHERPTHR31225:SF134(-)-GERMACRENE D SYNTHASE-LIKEcoord: 5..201
NoneNo IPR availablePANTHERPTHR31225OS04G0344100 PROTEIN-RELATEDcoord: 5..201
IPR008930Terpenoid cyclases/protein prenyltransferase alpha-alpha toroidSUPERFAMILY48239Terpenoid cyclases/Protein prenyltransferasescoord: 2..192

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsGy3G005780.2CsGy3G005780.2mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0016102 diterpenoid biosynthetic process
biological_process GO:0045338 farnesyl diphosphate metabolic process
biological_process GO:0051762 sesquiterpene biosynthetic process
cellular_component GO:0005737 cytoplasm
molecular_function GO:0047461 (+)-delta-cadinene synthase activity
molecular_function GO:0000287 magnesium ion binding
molecular_function GO:0016829 lyase activity
molecular_function GO:0010333 terpene synthase activity