CsGy3G005190 (gene) Cucumber (Gy14) v2.1

Overview
NameCsGy3G005190
Typegene
OrganismCucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
DescriptionNADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12
LocationGy14Chr3: 4143173 .. 4148527 (+)
RNA-Seq ExpressionCsGy3G005190
SyntenyCsGy3G005190
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
GTTCAAAGTTTTTTATTTTGATTGATATAACCCTAAATTTAGGTGTAGACGTAACACTTTGACATTGTTTCACATCTTCATCAACCCTTTTTCCTTCATCTTAAATTGTGTATTTATCCCAATTTTCTCTACAAAATAAACATCATATTCATACCGTAGGATCTTCGATACAAAATTCGATTCCGACTATTTTAATTCAGGGGACAAGAAGGAAGAAAAATCGAGGGATCTCCAAATTCAGAGCTTAAACTGAGAGAGAGCACGATCTTAAGGCAAGTCTACAATGGGGAGAGCATAATTTTTCTGGAGTGGAAGAGGAGAAAGAAATTTTGGGATATGAATGCTCTGTAATACCCCCATCAAACGGTGGTTGGAACGAAGATAATGTCGAAACTTTTTGGGAAAATTGCTGCTTTCTTCAGCAATAGAACTCTGGTGGGAGTGGACAAAGCGGGAAACAGATACTTCTTCGTAAAAGAAGAAATAGATGGTATAAGTAAGTAGGTCTAAATACCCTTTCTTTTCTATTTCTATATTTTCCTTTCTTAGATTGCATTTGATCGGAATGAGGGTCTTTCTTTGGCTTGCATTTTGAATTTCTAGATTTTTTCACTTATTTGTTTTTAAAAATTTGTTCTCTTTGTTTCTTTGTGCATTTCCTGTTCCATTGATCAATTTTAATTAAACAGTATTGGAAGTATGAAAGTACAGAAGAACTTAGCATCTAACTTATTTTGAACTGTGGAAAGCCAGCAGTTTTCTAAGCCCACCGTTGAGCCTTTGCAATTGAGTTTAAAAATTGTATGCCATGTGTTGTTTTTTAGTTTTTTGAAAATTAAGCCTCCGAACACCACTTCTACATCTAAATATCTTGCTTTGTTATCTACTTTTTAAAAATCAAGTGGCCTAGTGTTAAAAAATCTGTCTCAATAACTAATGAAGAATAACTAAGAGTTCATAGAATTAATTTCCTACTACTTTCCTTGACACCCAAATGTTCTAGGGACAGTTGGGTTCTCTCGGTGAGATTAGTTGAGGTGCCCGTAAGTTGCCCCAAACACTCGTGGATATGAAAAAAACTTGTTTTTGTTTTTGGAATTTGACATAGAATTCAACTTTTGTACTTGAAGAAATATGCAAGACATTGTAAGAAAATATCTTTTTGCACAGTTGTACTCAACATTAAGTGGATGATGTTCATGAGAAATGGAGAGAAAGCGCTCATGAATTAGGGTGATACATAGGTAGCTGCCTTTGTTGTTTATAGGATGAAACTTCTATCATTGGACATATACAGCTCACGCAATTTTCACTCTTTGGTTTGCTAGTGAAAGAGAAGAGATGGGTGCTATTTAAGGGTGAGGATGATCCAACATCAATTCCAGGTAAGCATTTATGGACCTATGTTTAAGACTTATGAATTAGGAGAAGGGCTTTGTTATTTGAATCATCCGATTATGTCATTTTTAAATCACGGTTTAAGATATAGTACCAGTTTTGGGAACATATCCAGTTTTGGGAACTTGAATGATTATTAACATGAGCTGGATATGTAGTCTAGAAAGAACCGAATTTGCTGATGTTAGGTTTTCCTGATGATGATTGCTTATATTTTATTGCTGCAGTGGAGTGGATATGTTGGTTAAATGGGCAGCGTAAAAAGGCTCCAACCCCAGAGGTAACCCATTACCTTCTTCCACGACCAACTGATCTTTGCATTCCACTTGAATGATCAGAGGATTTGTGATTGGTGTGCTAAGCAGGATTTGATATTTATATTGTTTGTTCTTTTGCCATTTTCTTCAGGAAATGAGGGAGCTAGAAGCTAGGCGTGAACGTGTACGACAAAATGTTGCTCGTATGTTGACTCTTCAATAAAATTTTGCATCTTATTACTTGGTTGTTCATGACTGAACATTTTTCTACATTATGTAATTATCATCGTCAACTTCTCTATATCAAAATTGTGACTTATATACAGGAAGAAAGGTATGAATTGCATTCTACCTGAAATTGCCACATAGAGGTCACCCAAACATATTCATATTTGAGAATTAATTCTCTTAGAGTCCCGTTTGGTAACTATTTCACTTTTTTTTTTTTTGGTTTTTGGAAATTAAGCCTATAAACACTTTTTACCCATGTTCTCATAAACGAAGTCAAATTTTGAAAACTAAGAAAAGTAGTCTTTAATAGCTTGTTTTTGTTTTTGGAATATGGCCAAGAATGCAACTCTTCTACTTGAAGATTGATACAAACCATGGTAAGAAAATCGGCTTATTTTCAAAAACCAAAATAAAAAAACAAAATGGTTACCAAATGAGGCTGTAGGAATTGATGATTGACTTTATAATCTTACTCAAGACATTCTTACCAAGGTCTTCTTTCCTGCCTTAGTAGATAAGTTTTTCTGTAACCATCTTTTTATGAGGTATAAAAGCAATTATCATTTGATTTTGCAGTTCAGAATTAAATTTTATTTGATACTTTTAGAAGAACCAATATCATTCTCATTCTTTGACTTAACATGGTCTAACTGAAAGTTATCTGTGATCAATTTAGTTCTCAAGAAAGAAGAGATGGAAAGAAACTCTAAAGAAGGCAATTTACGGAAAATCATCAGCACCGGTCAGTTGCTTATTGACAAAAACTTAAGTGCTTGTTACACTTGTAGCATATAGCTAATATTCATTTGCTGCATAGGTCAAGTTATGGGTCCTGACTTGAAAAGCTTTATCCGACAGGTCCCAACTGGTTCAGAAGGTATTGTTTGATTTCATTTTGTATTTTCTCACCCCCTTAATCTCCTCCCCACTCCTCACCAAGAGAAAAGAAATGTGATTACATTCAATCCTTAAATAGGATTTTTTTAAGAGCCATGGAGCTCAATGGTTTAAAAGGCTCTTGATATCAATGTTTTAAGAGGCTATTGAGGTTTATGCCTCCTTGAGGCTCGCCCCAAGGCAAGACTCTAACTTTTAACCTTGAGACTTGTGTTTATAAAAATGCACTGAGTGACTGAAGTTTAACGATTATAAAAATAATATTATTTTTCCCCATTCTTCAAATACATAAAAGGTTTGATTTGTGATAAATTGAGCTATTATTATTACAATTACTACAAAAAAATTATCATTGATATAACGGAAAGAAAATTAATGTTCAAGGGTTACAAACTCTCGAGTCTTGAAGGAAGTGAAAGTAAAACATAATCAGGAACTTTGAAACAATTACAGTTCTCTTCCTGATGCACTTTATTTTGAGCTATTACTAATTTCATATCGTGGCTTTAAGAGTGTCCAAACATAAAATTTTAGGATAAGTCAATCATATAATAATAGTAGTGATATTGATGTTAAAGATAACCTGTGGCACTTGGCAATGGTGATTATGTACACACACACTTTATGATTATGATGTTCAGTAACACCTAGTCAGTTCAATTTTAGGATTTGTAAAATATTTTCATCAAATTTGAGGCTTGCACCGCACCTAGAGGAAAGCCTCAAGATTGCATTTAGGCCTTTTCCCAATTGGAAAACAAAGCATTTTTTATTTTAAATAATCATTTGGAATGATCTAAGTTTTTCCTCTTGTTGGCTGATTAATTCCATGTACCTCTTCTGGTCATGTGTAACTCTCCCAAATTTGATAGTTCATTTCATTTGGACTTGAGTATATTATACCTATTGGATGTTTACACTCAGTTCATTCATTTTGGTATTTCTTGTTCAAAGGTGCCCAAGATGTGGAAGGATTGCCTACAAGGGATAGCCTGAGGTGGGCCATTCATTTTGAATTTTATACTGCTATTTTCTATATTGGTGAGGTGACATAAATATTGGTTAACTGTCTTCTTTTTTCTCAATGTTATGGGCATATCATGGGCAGAAATATTTAAATGTACTTTTCTGTGTAGTTCACCACTGATATTTCTCTATTTATTTTCTCCTCAATATTGCTCATTGGTCCAGTGTGCTAGGAGTTTGAGTTAATAGTTTGAATGCATCGAAGGACCAAGAATTTAGAGCAAGTCTATATTACCGAATGACTTATTGATTGTTATTCTTTCTGAGTTTGCTAGTTAAATAGTAGTATGATCATTATGTCATTGGTTTGCTGTTAAAAACATGTGAAACTTTCTGGTGCAATGTGCTTATGCTTAAAGAACTATTCCTCTCCTCTTGTAACGTGGATTTACCTTTGCTTCAACCACCAGGAACTCAAACGAAAAGGAGGCAGTTCAAGAGAAACCAATTCCCGAGTAAGTTGATTTTGTTTTTTTTTTTTCCCAACTCAATAGTCATAAATGTCAATATTAGATTGCATAGGATTCATGTTGACATTAGATACAAGGGATTATGAAGGTTGGCATATCTTTTACCTTTTCAGAAAAAAGGAAAACAACAAAGTGCCTATTGAATACCAAAAAGTTCCCATTCTTTCATATTCAGGTCCTCCGAGCCTGTTGGGTCTGGCCATACATTTAAACCAGGAACATGGCAGCCACCAACATGAATGGTGATTGCCCTTCAAGGAGAACTCGCCAACATTAAAGCTAGCAGTTCGTTCTATTCCCAACAATTTGGTAAGCTTCTGAGTTCCGATTCCTTACCTTCTACTTTTTCTGAGGACATGCCCTTCTACTTGACTGTATCAGATCCTGCCCTCCGAAGGTCTAAAACAAGATTGTCACTCTGCATTGCCTTGGTTTTCAAATGGTCATATGTAGTATTTGTCTGATGAAAAGCAGTTGTTACTTAAATTTTATGTAGTAAGTTCAATAAGTATCCTTATAGAATACTTGTGACAGTTTTGACCTCCCCCATTCTATCTAGAGGCTGAGAAAAGTAACTTGCAATTGTCGGTAGCAGCATTCCCTTGGAAGATTCACTGTGGGATTGATATCATTCCTGTTGGTTATGATTTGATTTGTAAAACATTTTATCCCAGATTGGTTGGAATTCATTGTAATAATGTTTTCAGGCTCAGCTTGAGGGATTAATAATGTTGATGCATTCGATATTTTGTTGTGTGCTCCCGCTACTAACATTTGTGGGGGTATAAGGATAGAAATGGGAAGCCTGAGAACATGATGTTAGGGCATAGGAATAGGATTAATGTGTGATTGTTTAGGCCTTTGAGAATGAGAATTTTGGAGATTTTTATTTCATTTGGCTGTCTAAACTATTATATTTTTGTCCTAAACTAATTCATTATATAAAGTTTATTTACCCTGTATGATAGGATCGGGGGTTTCGAAGCAAAAATCATATGATTGCTAACACATCAATATGTTAATCTCAATTTATTGTACAAATGTAAATCAACATTGTTGTTTTTATTTAATTCTAG

mRNA sequence

GTTCAAAGTTTTTTATTTTGATTGATATAACCCTAAATTTAGGTGTAGACGTAACACTTTGACATTGTTTCACATCTTCATCAACCCTTTTTCCTTCATCTTAAATTGTGTATTTATCCCAATTTTCTCTACAAAATAAACATCATATTCATACCGTAGGATCTTCGATACAAAATTCGATTCCGACTATTTTAATTCAGGGGACAAGAAGGAAGAAAAATCGAGGGATCTCCAAATTCAGAGCTTAAACTGAGAGAGAGCACGATCTTAAGGCAAGTCTACAATGGGGAGAGCATAATTTTTCTGGAGTGGAAGAGGAGAAAGAAATTTTGGGATATGAATGCTCTGTAATACCCCCATCAAACGGTGGTTGGAACGAAGATAATGTCGAAACTTTTTGGGAAAATTGCTGCTTTCTTCAGCAATAGAACTCTGGTGGGAGTGGACAAAGCGGGAAACAGATACTTCTTCGTAAAAGAAGAAATAGATGGTATAATGAAAGAGAAGAGATGGGTGCTATTTAAGGGTGAGGATGATCCAACATCAATTCCAGTGGAGTGGATATGTTGGTTAAATGGGCAGCGTAAAAAGGCTCCAACCCCAGAGGAAATGAGGGAGCTAGAAGCTAGGCGTGAACGTGTACGACAAAATGTTGCTCTTCTCAAGAAAGAAGAGATGGAAAGAAACTCTAAAGAAGGCAATTTACGGAAAATCATCAGCACCGGTCAAGTTATGGGTCCTGACTTGAAAAGCTTTATCCGACAGGTCCCAACTGGTTCAGAAGGTGCCCAAGATGTGGAAGGATTGCCTACAAGGGATAGCCTGAGGTGGGCCATTCATTTTGAATTTTATACTGCTATTTTCTATATTGGTGAGGTGACATAAATATTGGTTAACTGTCTTCTTTTTTCTCAATGTTATGGGCATATCATGGGCAGAAATATTTAAATGTACTTTTCTGTGTAGTTCACCACTGATATTTCTCTATTTATTTTCTCCTCAATATTGCTCATTGGTCCAGTGTGCTAGGAGTTTGAGTTAATAGTTTGAATGCATCGAAGGACCAAGAATTTAGAGCAAGTCTATATTACCGAATGACTTATTGATTGTTATTCTTTCTGAGTTTGCTAGTTAAATAGTAGTATGATCATTATGTCATTGGTTTGCTGTTAAAAACATGTGAAACTTTCTGGTGCAATGTGCTTATGCTTAAAGAACTATTCCTCTCCTCTTGTAACGTGGATTTACCTTTGCTTCAACCACCAGGAACTCAAACGAAAAGGAGGCAGTTCAAGAGAAACCAATTCCCGAGTCCTCCGAGCCTGTTGGGTCTGGCCATACATTTAAACCAGGAACATGGCAGCCACCAACATGAATGGTGATTGCCCTTCAAGGAGAACTCGCCAACATTAAAGCTAGCAGTTCGTTCTATTCCCAACAATTTGGTAAGCTTCTGAGTTCCGATTCCTTACCTTCTACTTTTTCTGAGGACATGCCCTTCTACTTGACTGTATCAGATCCTGCCCTCCGAAGGTCTAAAACAAGATTGTCACTCTGCATTGCCTTGGTTTTCAAATGGTCATATGTAGTATTTGTCTGATGAAAAGCAGTTGTTACTTAAATTTTATGTAGTAAGTTCAATAAGTATCCTTATAGAATACTTGTGACAGTTTTGACCTCCCCCATTCTATCTAGAGGCTGAGAAAAGTAACTTGCAATTGTCGGTAGCAGCATTCCCTTGGAAGATTCACTGTGGGATTGATATCATTCCTGTTGGTTATGATTTGATTTGTAAAACATTTTATCCCAGATTGGTTGGAATTCATTGTAATAATGTTTTCAGGCTCAGCTTGAGGGATTAATAATGTTGATGCATTCGATATTTTGTTGTGTGCTCCCGCTACTAACATTTGTGGGGGTATAAGGATAGAAATGGGAAGCCTGAGAACATGATGTTAGGGCATAGGAATAGGATTAATGTGTGATTGTTTAGGCCTTTGAGAATGAGAATTTTGGAGATTTTTATTTCATTTGGCTGTCTAAACTATTATATTTTTGTCCTAAACTAATTCATTATATAAAGTTTATTTACCCTGTATGATAGGATCGGGGGTTTCGAAGCAAAAATCATATGATTGCTAACACATCAATATGTTAATCTCAATTTATTGTACAAATGTAAATCAACATTGTTGTTTTTATTTAATTCTAG

Coding sequence (CDS)

ATGTCGAAACTTTTTGGGAAAATTGCTGCTTTCTTCAGCAATAGAACTCTGGTGGGAGTGGACAAAGCGGGAAACAGATACTTCTTCGTAAAAGAAGAAATAGATGGTATAATGAAAGAGAAGAGATGGGTGCTATTTAAGGGTGAGGATGATCCAACATCAATTCCAGTGGAGTGGATATGTTGGTTAAATGGGCAGCGTAAAAAGGCTCCAACCCCAGAGGAAATGAGGGAGCTAGAAGCTAGGCGTGAACGTGTACGACAAAATGTTGCTCTTCTCAAGAAAGAAGAGATGGAAAGAAACTCTAAAGAAGGCAATTTACGGAAAATCATCAGCACCGGTCAAGTTATGGGTCCTGACTTGAAAAGCTTTATCCGACAGGTCCCAACTGGTTCAGAAGGTGCCCAAGATGTGGAAGGATTGCCTACAAGGGATAGCCTGAGGTGGGCCATTCATTTTGAATTTTATACTGCTATTTTCTATATTGGTGAGGTGACATAA

Protein sequence

MSKLFGKIAAFFSNRTLVGVDKAGNRYFFVKEEIDGIMKEKRWVLFKGEDDPTSIPVEWICWLNGQRKKAPTPEEMRELEARRERVRQNVALLKKEEMERNSKEGNLRKIISTGQVMGPDLKSFIRQVPTGSEGAQDVEGLPTRDSLRWAIHFEFYTAIFYIGEVT*
Homology
BLAST of CsGy3G005190 vs. ExPASy Swiss-Prot
Match: Q54MV7 (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12 OS=Dictyostelium discoideum OX=44689 GN=ndufa12 PE=2 SV=2)

HSP 1 Score: 48.5 bits (114), Expect = 8.4e-05
Identity = 26/59 (44.07%), Postives = 36/59 (61.02%), Query Frame = 0

Query: 16 TLVGVDKAGNRYFFVKEEIDGIMKEKRWVLFKG--EDDPTSIPVEWICWLNGQRKKAPT 73
          TLVGVDK GNRY+  ++EI G     RWV +     +DPT+IP E+  W++    K P+
Sbjct: 33 TLVGVDKVGNRYYENRQEIYG---RHRWVEYGDYKSNDPTTIPPEYHSWIHHVSDKLPS 88

BLAST of CsGy3G005190 vs. NCBI nr
Match: XP_004152928.1 (uncharacterized protein LOC101214441 isoform X2 [Cucumis sativus] >KGN56129.1 hypothetical protein Csa_010369 [Cucumis sativus])

HSP 1 Score: 293 bits (751), Expect = 3.15e-99
Identity = 148/148 (100.00%), Postives = 148/148 (100.00%), Query Frame = 0

Query: 1   MSKLFGKIAAFFSNRTLVGVDKAGNRYFFVKEEIDGIMKEKRWVLFKGEDDPTSIPVEWI 60
           MSKLFGKIAAFFSNRTLVGVDKAGNRYFFVKEEIDGIMKEKRWVLFKGEDDPTSIPVEWI
Sbjct: 1   MSKLFGKIAAFFSNRTLVGVDKAGNRYFFVKEEIDGIMKEKRWVLFKGEDDPTSIPVEWI 60

Query: 61  CWLNGQRKKAPTPEEMRELEARRERVRQNVALLKKEEMERNSKEGNLRKIISTGQVMGPD 120
           CWLNGQRKKAPTPEEMRELEARRERVRQNVALLKKEEMERNSKEGNLRKIISTGQVMGPD
Sbjct: 61  CWLNGQRKKAPTPEEMRELEARRERVRQNVALLKKEEMERNSKEGNLRKIISTGQVMGPD 120

Query: 121 LKSFIRQVPTGSEGAQDVEGLPTRDSLR 148
           LKSFIRQVPTGSEGAQDVEGLPTRDSLR
Sbjct: 121 LKSFIRQVPTGSEGAQDVEGLPTRDSLR 148

BLAST of CsGy3G005190 vs. NCBI nr
Match: XP_031738721.1 (uncharacterized protein LOC101214441 isoform X1 [Cucumis sativus])

HSP 1 Score: 293 bits (751), Expect = 6.95e-99
Identity = 148/148 (100.00%), Postives = 148/148 (100.00%), Query Frame = 0

Query: 1   MSKLFGKIAAFFSNRTLVGVDKAGNRYFFVKEEIDGIMKEKRWVLFKGEDDPTSIPVEWI 60
           MSKLFGKIAAFFSNRTLVGVDKAGNRYFFVKEEIDGIMKEKRWVLFKGEDDPTSIPVEWI
Sbjct: 1   MSKLFGKIAAFFSNRTLVGVDKAGNRYFFVKEEIDGIMKEKRWVLFKGEDDPTSIPVEWI 60

Query: 61  CWLNGQRKKAPTPEEMRELEARRERVRQNVALLKKEEMERNSKEGNLRKIISTGQVMGPD 120
           CWLNGQRKKAPTPEEMRELEARRERVRQNVALLKKEEMERNSKEGNLRKIISTGQVMGPD
Sbjct: 61  CWLNGQRKKAPTPEEMRELEARRERVRQNVALLKKEEMERNSKEGNLRKIISTGQVMGPD 120

Query: 121 LKSFIRQVPTGSEGAQDVEGLPTRDSLR 148
           LKSFIRQVPTGSEGAQDVEGLPTRDSLR
Sbjct: 121 LKSFIRQVPTGSEGAQDVEGLPTRDSLR 148

BLAST of CsGy3G005190 vs. NCBI nr
Match: KAA0033972.1 (NDUFA12 domain-containing protein [Cucumis melo var. makuwa])

HSP 1 Score: 285 bits (729), Expect = 7.09e-96
Identity = 143/148 (96.62%), Postives = 145/148 (97.97%), Query Frame = 0

Query: 1   MSKLFGKIAAFFSNRTLVGVDKAGNRYFFVKEEIDGIMKEKRWVLFKGEDDPTSIPVEWI 60
           MSKLFGKIA FFSNRTLVGVDKAGNRYFFVKEEIDGIMKEKRWV+FKGEDDPTSIPVEWI
Sbjct: 1   MSKLFGKIAGFFSNRTLVGVDKAGNRYFFVKEEIDGIMKEKRWVVFKGEDDPTSIPVEWI 60

Query: 61  CWLNGQRKKAPTPEEMRELEARRERVRQNVALLKKEEMERNSKEGNLRKIISTGQVMGPD 120
           CWLNGQRKKAPTPEEM ELEARRERVRQNVALLKKEEMERNSKEG LRKIISTGQVMGPD
Sbjct: 61  CWLNGQRKKAPTPEEMMELEARRERVRQNVALLKKEEMERNSKEGKLRKIISTGQVMGPD 120

Query: 121 LKSFIRQVPTGSEGAQDVEGLPTRDSLR 148
           LKSFIRQVPTGSEGAQDVEGLPTRD+LR
Sbjct: 121 LKSFIRQVPTGSEGAQDVEGLPTRDTLR 148

BLAST of CsGy3G005190 vs. NCBI nr
Match: XP_038903174.1 (uncharacterized protein LOC120089839 isoform X2 [Benincasa hispida])

HSP 1 Score: 281 bits (719), Expect = 2.37e-94
Identity = 142/148 (95.95%), Postives = 143/148 (96.62%), Query Frame = 0

Query: 1   MSKLFGKIAAFFSNRTLVGVDKAGNRYFFVKEEIDGIMKEKRWVLFKGEDDPTSIPVEWI 60
           MSKLFGKIA FFSNRTLVGVDKAGNRYFFVKEEIDGIMKEKRWV+FKGEDDPTSIPVEWI
Sbjct: 1   MSKLFGKIAGFFSNRTLVGVDKAGNRYFFVKEEIDGIMKEKRWVVFKGEDDPTSIPVEWI 60

Query: 61  CWLNGQRKKAPTPEEMRELEARRERVRQNVALLKKEEMERNSKEGNLRKIISTGQVMGPD 120
           CWLNGQRKKAPTPEEM ELEARRERVRQNVALLKKEEMERNSKEGNLRKIISTGQV GPD
Sbjct: 61  CWLNGQRKKAPTPEEMMELEARRERVRQNVALLKKEEMERNSKEGNLRKIISTGQVAGPD 120

Query: 121 LKSFIRQVPTGSEGAQDVEGLPTRDSLR 148
           LKSFIRQ PTGSEGAQDVEGL TRDSLR
Sbjct: 121 LKSFIRQFPTGSEGAQDVEGLTTRDSLR 148

BLAST of CsGy3G005190 vs. NCBI nr
Match: XP_038903173.1 (uncharacterized protein LOC120089839 isoform X1 [Benincasa hispida])

HSP 1 Score: 281 bits (719), Expect = 3.01e-94
Identity = 142/148 (95.95%), Postives = 143/148 (96.62%), Query Frame = 0

Query: 1   MSKLFGKIAAFFSNRTLVGVDKAGNRYFFVKEEIDGIMKEKRWVLFKGEDDPTSIPVEWI 60
           MSKLFGKIA FFSNRTLVGVDKAGNRYFFVKEEIDGIMKEKRWV+FKGEDDPTSIPVEWI
Sbjct: 1   MSKLFGKIAGFFSNRTLVGVDKAGNRYFFVKEEIDGIMKEKRWVVFKGEDDPTSIPVEWI 60

Query: 61  CWLNGQRKKAPTPEEMRELEARRERVRQNVALLKKEEMERNSKEGNLRKIISTGQVMGPD 120
           CWLNGQRKKAPTPEEM ELEARRERVRQNVALLKKEEMERNSKEGNLRKIISTGQV GPD
Sbjct: 61  CWLNGQRKKAPTPEEMMELEARRERVRQNVALLKKEEMERNSKEGNLRKIISTGQVAGPD 120

Query: 121 LKSFIRQVPTGSEGAQDVEGLPTRDSLR 148
           LKSFIRQ PTGSEGAQDVEGL TRDSLR
Sbjct: 121 LKSFIRQFPTGSEGAQDVEGLTTRDSLR 148

BLAST of CsGy3G005190 vs. ExPASy TrEMBL
Match: A0A0A0L526 (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12 OS=Cucumis sativus OX=3659 GN=Csa_3G077630 PE=3 SV=1)

HSP 1 Score: 293 bits (751), Expect = 1.52e-99
Identity = 148/148 (100.00%), Postives = 148/148 (100.00%), Query Frame = 0

Query: 1   MSKLFGKIAAFFSNRTLVGVDKAGNRYFFVKEEIDGIMKEKRWVLFKGEDDPTSIPVEWI 60
           MSKLFGKIAAFFSNRTLVGVDKAGNRYFFVKEEIDGIMKEKRWVLFKGEDDPTSIPVEWI
Sbjct: 1   MSKLFGKIAAFFSNRTLVGVDKAGNRYFFVKEEIDGIMKEKRWVLFKGEDDPTSIPVEWI 60

Query: 61  CWLNGQRKKAPTPEEMRELEARRERVRQNVALLKKEEMERNSKEGNLRKIISTGQVMGPD 120
           CWLNGQRKKAPTPEEMRELEARRERVRQNVALLKKEEMERNSKEGNLRKIISTGQVMGPD
Sbjct: 61  CWLNGQRKKAPTPEEMRELEARRERVRQNVALLKKEEMERNSKEGNLRKIISTGQVMGPD 120

Query: 121 LKSFIRQVPTGSEGAQDVEGLPTRDSLR 148
           LKSFIRQVPTGSEGAQDVEGLPTRDSLR
Sbjct: 121 LKSFIRQVPTGSEGAQDVEGLPTRDSLR 148

BLAST of CsGy3G005190 vs. ExPASy TrEMBL
Match: A0A5A7SS01 (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold400G00330 PE=3 SV=1)

HSP 1 Score: 285 bits (729), Expect = 3.43e-96
Identity = 143/148 (96.62%), Postives = 145/148 (97.97%), Query Frame = 0

Query: 1   MSKLFGKIAAFFSNRTLVGVDKAGNRYFFVKEEIDGIMKEKRWVLFKGEDDPTSIPVEWI 60
           MSKLFGKIA FFSNRTLVGVDKAGNRYFFVKEEIDGIMKEKRWV+FKGEDDPTSIPVEWI
Sbjct: 1   MSKLFGKIAGFFSNRTLVGVDKAGNRYFFVKEEIDGIMKEKRWVVFKGEDDPTSIPVEWI 60

Query: 61  CWLNGQRKKAPTPEEMRELEARRERVRQNVALLKKEEMERNSKEGNLRKIISTGQVMGPD 120
           CWLNGQRKKAPTPEEM ELEARRERVRQNVALLKKEEMERNSKEG LRKIISTGQVMGPD
Sbjct: 61  CWLNGQRKKAPTPEEMMELEARRERVRQNVALLKKEEMERNSKEGKLRKIISTGQVMGPD 120

Query: 121 LKSFIRQVPTGSEGAQDVEGLPTRDSLR 148
           LKSFIRQVPTGSEGAQDVEGLPTRD+LR
Sbjct: 121 LKSFIRQVPTGSEGAQDVEGLPTRDTLR 148

BLAST of CsGy3G005190 vs. ExPASy TrEMBL
Match: A0A5D3BTS9 (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold925G00260 PE=3 SV=1)

HSP 1 Score: 261 bits (668), Expect = 6.09e-87
Identity = 133/148 (89.86%), Postives = 135/148 (91.22%), Query Frame = 0

Query: 1   MSKLFGKIAAFFSNRTLVGVDKAGNRYFFVKEEIDGIMKEKRWVLFKGEDDPTSIPVEWI 60
           MSKLFGKIA FFSNRTLVGVDKAGNRYFFVKEEIDGIMKEKRWV+FKGEDDPTSIPVEWI
Sbjct: 1   MSKLFGKIAGFFSNRTLVGVDKAGNRYFFVKEEIDGIMKEKRWVVFKGEDDPTSIPVEWI 60

Query: 61  CWLNGQRKKAPTPEEMRELEARRERVRQNVALLKKEEMERNSKEGNLRKIISTGQVMGPD 120
           CWLNGQRKKAPTPEEM ELEARRERVRQNVALLKKEEMERNSKEG LRKIISTGQVMGPD
Sbjct: 61  CWLNGQRKKAPTPEEMMELEARRERVRQNVALLKKEEMERNSKEGKLRKIISTGQVMGPD 120

Query: 121 LKSFIRQVPTGSEGAQDVEGLPTRDSLR 148
           LKSFIRQVPTGSEG Q       R+  R
Sbjct: 121 LKSFIRQVPTGSEGTQTKRSQFKRNQFR 148

BLAST of CsGy3G005190 vs. ExPASy TrEMBL
Match: A0A6J1DNE9 (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12 OS=Momordica charantia OX=3673 GN=LOC111022834 PE=3 SV=1)

HSP 1 Score: 249 bits (637), Expect = 3.54e-82
Identity = 123/148 (83.11%), Postives = 134/148 (90.54%), Query Frame = 0

Query: 1   MSKLFGKIAAFFSNRTLVGVDKAGNRYFFVKEEIDGIMKEKRWVLFKGEDDPTSIPVEWI 60
           MSKLFGKIA+FFS+RT+ GVDK+GN+YFF KEEIDG+MKEKRWV+FKGEDDPTSIPVEWI
Sbjct: 1   MSKLFGKIASFFSSRTMAGVDKSGNKYFFRKEEIDGLMKEKRWVVFKGEDDPTSIPVEWI 60

Query: 61  CWLNGQRKKAPTPEEMRELEARRERVRQNVALLKKEEMERNSKEGNLRKIISTGQVMGPD 120
           CWLNGQRKKAPTPEEM ELEARRERVRQNV LLKK+EMERNS+EGNLRK+IS  QV GPD
Sbjct: 61  CWLNGQRKKAPTPEEMMELEARRERVRQNVTLLKKQEMERNSREGNLRKVISADQVAGPD 120

Query: 121 LKSFIRQVPTGSEGAQDVEGLPTRDSLR 148
           L SFIRQ PTGSEGAQD EG   R+S R
Sbjct: 121 LNSFIRQFPTGSEGAQDEEGSAARNSPR 148

BLAST of CsGy3G005190 vs. ExPASy TrEMBL
Match: A0A6J1JVV8 (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12 OS=Cucurbita maxima OX=3661 GN=LOC111487996 PE=3 SV=1)

HSP 1 Score: 249 bits (636), Expect = 4.70e-82
Identity = 127/148 (85.81%), Postives = 135/148 (91.22%), Query Frame = 0

Query: 1   MSKLFGKIAAFFSNRTLVGVDKAGNRYFFVKEEIDGIMKEKRWVLFKGEDDPTSIPVEWI 60
           MSKLF KIA FF++RTL+GVDKAGNRYFFVKEEIDGIMKEKRWV+FKGEDDPTSIPVEWI
Sbjct: 1   MSKLFKKIAGFFTDRTLMGVDKAGNRYFFVKEEIDGIMKEKRWVVFKGEDDPTSIPVEWI 60

Query: 61  CWLNGQRKKAPTPEEMRELEARRERVRQNVALLKKEEMERNSKEGNLRKIISTGQVMGPD 120
           CWLNGQRKKAPTPEEM ELEARRERVRQNVALLKKEEMER SKE NLRK++ST  V GP+
Sbjct: 61  CWLNGQRKKAPTPEEMMELEARRERVRQNVALLKKEEMERKSKESNLRKVVST--VAGPN 120

Query: 121 LKSFIRQVPTGSEGAQDVEGLPTRDSLR 148
           LKSFIRQ PTGSEGAQD EG   +DSLR
Sbjct: 121 LKSFIRQFPTGSEGAQDNEGSAAKDSLR 146

BLAST of CsGy3G005190 vs. TAIR 10
Match: AT4G26965.1 (NADH:ubiquinone oxidoreductase, 17.2kDa subunit )

HSP 1 Score: 183.7 bits (465), Expect = 1.2e-46
Identity = 92/152 (60.53%), Postives = 113/152 (74.34%), Query Frame = 0

Query: 1   MSKLFGKIAAFFSNRTLVGVDKAGNRYFFVKEEIDGIMKEKRWVLFKGEDDPTSIPVEWI 60
           MS+L+ + A  FS+++ +GVDK GN+YF   EEIDG +KEKRWV F+ E+DPTSIPVEWI
Sbjct: 1   MSRLWARFAGLFSSKSFIGVDKTGNKYFSRMEEIDGFVKEKRWVKFRREEDPTSIPVEWI 60

Query: 61  CWLNGQRKKAPTPEEMRELEARRERVRQNVALLKKEEMERNSKEGNLRKIISTGQVMGPD 120
           CWLNGQRK+APTPEEM ELEARRERV+ NVALLKKEE E+ ++ G  RK I+ G+V GPD
Sbjct: 61  CWLNGQRKRAPTPEEMIELEARRERVKLNVALLKKEEEEKKARVGTGRK-ITIGKVDGPD 120

Query: 121 LKSFIRQVPTGSEGAQDVEGLPTRDSLRWAIH 153
           L SF+RQ P  S+G +  E     D  R   H
Sbjct: 121 LTSFVRQFPPDSKGGEPEEASEEADKSRAKEH 151

BLAST of CsGy3G005190 vs. TAIR 10
Match: AT4G26965.2 (NADH:ubiquinone oxidoreductase, 17.2kDa subunit )

HSP 1 Score: 143.7 bits (361), Expect = 1.4e-34
Identity = 74/115 (64.35%), Postives = 86/115 (74.78%), Query Frame = 0

Query: 38  MKEKRWVLFKGEDDPTSIPVEWICWLNGQRKKAPTPEEMRELEARRERVRQNVALLKKEE 97
           MKEKRWV F+ E+DPTSIPVEWICWLNGQRK+APTPEEM ELEARRERV+ NVALLKKEE
Sbjct: 1   MKEKRWVKFRREEDPTSIPVEWICWLNGQRKRAPTPEEMIELEARRERVKLNVALLKKEE 60

Query: 98  MERNSKEGNLRKIISTGQVMGPDLKSFIRQVPTGSEGAQDVEGLPTRDSLRWAIH 153
            E+ ++ G  RK I+ G+V GPDL SF+RQ P  S+G +  E     D  R   H
Sbjct: 61  EEKKARVGTGRK-ITIGKVDGPDLTSFVRQFPPDSKGGEPEEASEEADKSRAKEH 114

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Q54MV78.4e-0544.07NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12 OS=Dictyostelium d... [more]
Match NameE-valueIdentityDescription
XP_004152928.13.15e-99100.00uncharacterized protein LOC101214441 isoform X2 [Cucumis sativus] >KGN56129.1 hy... [more]
XP_031738721.16.95e-99100.00uncharacterized protein LOC101214441 isoform X1 [Cucumis sativus][more]
KAA0033972.17.09e-9696.62NDUFA12 domain-containing protein [Cucumis melo var. makuwa][more]
XP_038903174.12.37e-9495.95uncharacterized protein LOC120089839 isoform X2 [Benincasa hispida][more]
XP_038903173.13.01e-9495.95uncharacterized protein LOC120089839 isoform X1 [Benincasa hispida][more]
Match NameE-valueIdentityDescription
A0A0A0L5261.52e-99100.00NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12 OS=Cucumis sativus... [more]
A0A5A7SS013.43e-9696.62NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12 OS=Cucumis melo va... [more]
A0A5D3BTS96.09e-8789.86NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12 OS=Cucumis melo va... [more]
A0A6J1DNE93.54e-8283.11NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12 OS=Momordica chara... [more]
A0A6J1JVV84.70e-8285.81NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12 OS=Cucurbita maxim... [more]
Match NameE-valueIdentityDescription
AT4G26965.11.2e-4660.53NADH:ubiquinone oxidoreductase, 17.2kDa subunit [more]
AT4G26965.21.4e-3464.35NADH:ubiquinone oxidoreductase, 17.2kDa subunit [more]
InterPro
Analysis Name: InterPro Annotations of Cucumber (Gy14) v2.1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 76..96
NoneNo IPR availablePANTHERPTHR12910:SF1NADH DEHYDROGENASE [UBIQUINONE] 1 ALPHA SUBCOMPLEX SUBUNIT 12coord: 1..136
IPR007763NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12PFAMPF05071NDUFA12coord: 16..95
e-value: 2.5E-12
score: 47.6
IPR007763NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12PANTHERPTHR12910NADH-UBIQUINONE OXIDOREDUCTASE SUBUNIT B17.2coord: 1..136

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsGy3G005190.2CsGy3G005190.2mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0032981 mitochondrial respiratory chain complex I assembly
cellular_component GO:0005743 mitochondrial inner membrane
cellular_component GO:0070469 respirasome
cellular_component GO:0016020 membrane