CsGy3G005190 (gene) Cucumber (Gy14) v2.1

Overview


Name	CsGy3G005190
Type	gene
Organism	Cucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
Description	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12
Location	Gy14Chr3: 4143173 .. 4148527 (+)
RNA-Seq Expression	CsGy3G005190
Synteny	CsGy3G005190

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GTTCAAAGTTTTTTATTTTGATTGATATAACCCTAAATTTAGGTGTAGACGTAACACTTTGACATTGTTTCACATCTTCATCAACCCTTTTTCCTTCATCTTAAATTGTGTATTTATCCCAATTTTCTCTACAAAATAAACATCATATTCATACCGTAGGATCTTCGATACAAAATTCGATTCCGACTATTTTAATTCAGGGGACAAGAAGGAAGAAAAATCGAGGGATCTCCAAATTCAGAGCTTAAACTGAGAGAGAGCACGATCTTAAGGCAAGTCTACAATGGGGAGAGCATAATTTTTCTGGAGTGGAAGAGGAGAAAGAAATTTTGGGATATGAATGCTCTGTAATACCCCCATCAAACGGTGGTTGGAACGAAGATAATGTCGAAACTTTTTGGGAAAATTGCTGCTTTCTTCAGCAATAGAACTCTGGTGGGAGTGGACAAAGCGGGAAACAGATACTTCTTCGTAAAAGAAGAAATAGATGGTATAAGTAAGTAGGTCTAAATACCCTTTCTTTTCTATTTCTATATTTTCCTTTCTTAGATTGCATTTGATCGGAATGAGGGTCTTTCTTTGGCTTGCATTTTGAATTTCTAGATTTTTTCACTTATTTGTTTTTAAAAATTTGTTCTCTTTGTTTCTTTGTGCATTTCCTGTTCCATTGATCAATTTTAATTAAACAGTATTGGAAGTATGAAAGTACAGAAGAACTTAGCATCTAACTTATTTTGAACTGTGGAAAGCCAGCAGTTTTCTAAGCCCACCGTTGAGCCTTTGCAATTGAGTTTAAAAATTGTATGCCATGTGTTGTTTTTTAGTTTTTTGAAAATTAAGCCTCCGAACACCACTTCTACATCTAAATATCTTGCTTTGTTATCTACTTTTTAAAAATCAAGTGGCCTAGTGTTAAAAAATCTGTCTCAATAACTAATGAAGAATAACTAAGAGTTCATAGAATTAATTTCCTACTACTTTCCTTGACACCCAAATGTTCTAGGGACAGTTGGGTTCTCTCGGTGAGATTAGTTGAGGTGCCCGTAAGTTGCCCCAAACACTCGTGGATATGAAAAAAACTTGTTTTTGTTTTTGGAATTTGACATAGAATTCAACTTTTGTACTTGAAGAAATATGCAAGACATTGTAAGAAAATATCTTTTTGCACAGTTGTACTCAACATTAAGTGGATGATGTTCATGAGAAATGGAGAGAAAGCGCTCATGAATTAGGGTGATACATAGGTAGCTGCCTTTGTTGTTTATAGGATGAAACTTCTATCATTGGACATATACAGCTCACGCAATTTTCACTCTTTGGTTTGCTAGTGAAAGAGAAGAGATGGGTGCTATTTAAGGGTGAGGATGATCCAACATCAATTCCAGGTAAGCATTTATGGACCTATGTTTAAGACTTATGAATTAGGAGAAGGGCTTTGTTATTTGAATCATCCGATTATGTCATTTTTAAATCACGGTTTAAGATATAGTACCAGTTTTGGGAACATATCCAGTTTTGGGAACTTGAATGATTATTAACATGAGCTGGATATGTAGTCTAGAAAGAACCGAATTTGCTGATGTTAGGTTTTCCTGATGATGATTGCTTATATTTTATTGCTGCAGTGGAGTGGATATGTTGGTTAAATGGGCAGCGTAAAAAGGCTCCAACCCCAGAGGTAACCCATTACCTTCTTCCACGACCAACTGATCTTTGCATTCCACTTGAATGATCAGAGGATTTGTGATTGGTGTGCTAAGCAGGATTTGATATTTATATTGTTTGTTCTTTTGCCATTTTCTTCAGGAAATGAGGGAGCTAGAAGCTAGGCGTGAACGTGTACGACAAAATGTTGCTCGTATGTTGACTCTTCAATAAAATTTTGCATCTTATTACTTGGTTGTTCATGACTGAACATTTTTCTACATTATGTAATTATCATCGTCAACTTCTCTATATCAAAATTGTGACTTATATACAGGAAGAAAGGTATGAATTGCATTCTACCTGAAATTGCCACATAGAGGTCACCCAAACATATTCATATTTGAGAATTAATTCTCTTAGAGTCCCGTTTGGTAACTATTTCACTTTTTTTTTTTTTGGTTTTTGGAAATTAAGCCTATAAACACTTTTTACCCATGTTCTCATAAACGAAGTCAAATTTTGAAAACTAAGAAAAGTAGTCTTTAATAGCTTGTTTTTGTTTTTGGAATATGGCCAAGAATGCAACTCTTCTACTTGAAGATTGATACAAACCATGGTAAGAAAATCGGCTTATTTTCAAAAACCAAAATAAAAAAACAAAATGGTTACCAAATGAGGCTGTAGGAATTGATGATTGACTTTATAATCTTACTCAAGACATTCTTACCAAGGTCTTCTTTCCTGCCTTAGTAGATAAGTTTTTCTGTAACCATCTTTTTATGAGGTATAAAAGCAATTATCATTTGATTTTGCAGTTCAGAATTAAATTTTATTTGATACTTTTAGAAGAACCAATATCATTCTCATTCTTTGACTTAACATGGTCTAACTGAAAGTTATCTGTGATCAATTTAGTTCTCAAGAAAGAAGAGATGGAAAGAAACTCTAAAGAAGGCAATTTACGGAAAATCATCAGCACCGGTCAGTTGCTTATTGACAAAAACTTAAGTGCTTGTTACACTTGTAGCATATAGCTAATATTCATTTGCTGCATAGGTCAAGTTATGGGTCCTGACTTGAAAAGCTTTATCCGACAGGTCCCAACTGGTTCAGAAGGTATTGTTTGATTTCATTTTGTATTTTCTCACCCCCTTAATCTCCTCCCCACTCCTCACCAAGAGAAAAGAAATGTGATTACATTCAATCCTTAAATAGGATTTTTTTAAGAGCCATGGAGCTCAATGGTTTAAAAGGCTCTTGATATCAATGTTTTAAGAGGCTATTGAGGTTTATGCCTCCTTGAGGCTCGCCCCAAGGCAAGACTCTAACTTTTAACCTTGAGACTTGTGTTTATAAAAATGCACTGAGTGACTGAAGTTTAACGATTATAAAAATAATATTATTTTTCCCCATTCTTCAAATACATAAAAGGTTTGATTTGTGATAAATTGAGCTATTATTATTACAATTACTACAAAAAAATTATCATTGATATAACGGAAAGAAAATTAATGTTCAAGGGTTACAAACTCTCGAGTCTTGAAGGAAGTGAAAGTAAAACATAATCAGGAACTTTGAAACAATTACAGTTCTCTTCCTGATGCACTTTATTTTGAGCTATTACTAATTTCATATCGTGGCTTTAAGAGTGTCCAAACATAAAATTTTAGGATAAGTCAATCATATAATAATAGTAGTGATATTGATGTTAAAGATAACCTGTGGCACTTGGCAATGGTGATTATGTACACACACACTTTATGATTATGATGTTCAGTAACACCTAGTCAGTTCAATTTTAGGATTTGTAAAATATTTTCATCAAATTTGAGGCTTGCACCGCACCTAGAGGAAAGCCTCAAGATTGCATTTAGGCCTTTTCCCAATTGGAAAACAAAGCATTTTTTATTTTAAATAATCATTTGGAATGATCTAAGTTTTTCCTCTTGTTGGCTGATTAATTCCATGTACCTCTTCTGGTCATGTGTAACTCTCCCAAATTTGATAGTTCATTTCATTTGGACTTGAGTATATTATACCTATTGGATGTTTACACTCAGTTCATTCATTTTGGTATTTCTTGTTCAAAGGTGCCCAAGATGTGGAAGGATTGCCTACAAGGGATAGCCTGAGGTGGGCCATTCATTTTGAATTTTATACTGCTATTTTCTATATTGGTGAGGTGACATAAATATTGGTTAACTGTCTTCTTTTTTCTCAATGTTATGGGCATATCATGGGCAGAAATATTTAAATGTACTTTTCTGTGTAGTTCACCACTGATATTTCTCTATTTATTTTCTCCTCAATATTGCTCATTGGTCCAGTGTGCTAGGAGTTTGAGTTAATAGTTTGAATGCATCGAAGGACCAAGAATTTAGAGCAAGTCTATATTACCGAATGACTTATTGATTGTTATTCTTTCTGAGTTTGCTAGTTAAATAGTAGTATGATCATTATGTCATTGGTTTGCTGTTAAAAACATGTGAAACTTTCTGGTGCAATGTGCTTATGCTTAAAGAACTATTCCTCTCCTCTTGTAACGTGGATTTACCTTTGCTTCAACCACCAGGAACTCAAACGAAAAGGAGGCAGTTCAAGAGAAACCAATTCCCGAGTAAGTTGATTTTGTTTTTTTTTTTTCCCAACTCAATAGTCATAAATGTCAATATTAGATTGCATAGGATTCATGTTGACATTAGATACAAGGGATTATGAAGGTTGGCATATCTTTTACCTTTTCAGAAAAAAGGAAAACAACAAAGTGCCTATTGAATACCAAAAAGTTCCCATTCTTTCATATTCAGGTCCTCCGAGCCTGTTGGGTCTGGCCATACATTTAAACCAGGAACATGGCAGCCACCAACATGAATGGTGATTGCCCTTCAAGGAGAACTCGCCAACATTAAAGCTAGCAGTTCGTTCTATTCCCAACAATTTGGTAAGCTTCTGAGTTCCGATTCCTTACCTTCTACTTTTTCTGAGGACATGCCCTTCTACTTGACTGTATCAGATCCTGCCCTCCGAAGGTCTAAAACAAGATTGTCACTCTGCATTGCCTTGGTTTTCAAATGGTCATATGTAGTATTTGTCTGATGAAAAGCAGTTGTTACTTAAATTTTATGTAGTAAGTTCAATAAGTATCCTTATAGAATACTTGTGACAGTTTTGACCTCCCCCATTCTATCTAGAGGCTGAGAAAAGTAACTTGCAATTGTCGGTAGCAGCATTCCCTTGGAAGATTCACTGTGGGATTGATATCATTCCTGTTGGTTATGATTTGATTTGTAAAACATTTTATCCCAGATTGGTTGGAATTCATTGTAATAATGTTTTCAGGCTCAGCTTGAGGGATTAATAATGTTGATGCATTCGATATTTTGTTGTGTGCTCCCGCTACTAACATTTGTGGGGGTATAAGGATAGAAATGGGAAGCCTGAGAACATGATGTTAGGGCATAGGAATAGGATTAATGTGTGATTGTTTAGGCCTTTGAGAATGAGAATTTTGGAGATTTTTATTTCATTTGGCTGTCTAAACTATTATATTTTTGTCCTAAACTAATTCATTATATAAAGTTTATTTACCCTGTATGATAGGATCGGGGGTTTCGAAGCAAAAATCATATGATTGCTAACACATCAATATGTTAATCTCAATTTATTGTACAAATGTAAATCAACATTGTTGTTTTTATTTAATTCTAG

mRNA sequence

GTTCAAAGTTTTTTATTTTGATTGATATAACCCTAAATTTAGGTGTAGACGTAACACTTTGACATTGTTTCACATCTTCATCAACCCTTTTTCCTTCATCTTAAATTGTGTATTTATCCCAATTTTCTCTACAAAATAAACATCATATTCATACCGTAGGATCTTCGATACAAAATTCGATTCCGACTATTTTAATTCAGGGGACAAGAAGGAAGAAAAATCGAGGGATCTCCAAATTCAGAGCTTAAACTGAGAGAGAGCACGATCTTAAGGCAAGTCTACAATGGGGAGAGCATAATTTTTCTGGAGTGGAAGAGGAGAAAGAAATTTTGGGATATGAATGCTCTGTAATACCCCCATCAAACGGTGGTTGGAACGAAGATAATGTCGAAACTTTTTGGGAAAATTGCTGCTTTCTTCAGCAATAGAACTCTGGTGGGAGTGGACAAAGCGGGAAACAGATACTTCTTCGTAAAAGAAGAAATAGATGGTATAATGAAAGAGAAGAGATGGGTGCTATTTAAGGGTGAGGATGATCCAACATCAATTCCAGTGGAGTGGATATGTTGGTTAAATGGGCAGCGTAAAAAGGCTCCAACCCCAGAGGAAATGAGGGAGCTAGAAGCTAGGCGTGAACGTGTACGACAAAATGTTGCTCTTCTCAAGAAAGAAGAGATGGAAAGAAACTCTAAAGAAGGCAATTTACGGAAAATCATCAGCACCGGTCAAGTTATGGGTCCTGACTTGAAAAGCTTTATCCGACAGGTCCCAACTGGTTCAGAAGGTGCCCAAGATGTGGAAGGATTGCCTACAAGGGATAGCCTGAGGTGGGCCATTCATTTTGAATTTTATACTGCTATTTTCTATATTGGTGAGGTGACATAAATATTGGTTAACTGTCTTCTTTTTTCTCAATGTTATGGGCATATCATGGGCAGAAATATTTAAATGTACTTTTCTGTGTAGTTCACCACTGATATTTCTCTATTTATTTTCTCCTCAATATTGCTCATTGGTCCAGTGTGCTAGGAGTTTGAGTTAATAGTTTGAATGCATCGAAGGACCAAGAATTTAGAGCAAGTCTATATTACCGAATGACTTATTGATTGTTATTCTTTCTGAGTTTGCTAGTTAAATAGTAGTATGATCATTATGTCATTGGTTTGCTGTTAAAAACATGTGAAACTTTCTGGTGCAATGTGCTTATGCTTAAAGAACTATTCCTCTCCTCTTGTAACGTGGATTTACCTTTGCTTCAACCACCAGGAACTCAAACGAAAAGGAGGCAGTTCAAGAGAAACCAATTCCCGAGTCCTCCGAGCCTGTTGGGTCTGGCCATACATTTAAACCAGGAACATGGCAGCCACCAACATGAATGGTGATTGCCCTTCAAGGAGAACTCGCCAACATTAAAGCTAGCAGTTCGTTCTATTCCCAACAATTTGGTAAGCTTCTGAGTTCCGATTCCTTACCTTCTACTTTTTCTGAGGACATGCCCTTCTACTTGACTGTATCAGATCCTGCCCTCCGAAGGTCTAAAACAAGATTGTCACTCTGCATTGCCTTGGTTTTCAAATGGTCATATGTAGTATTTGTCTGATGAAAAGCAGTTGTTACTTAAATTTTATGTAGTAAGTTCAATAAGTATCCTTATAGAATACTTGTGACAGTTTTGACCTCCCCCATTCTATCTAGAGGCTGAGAAAAGTAACTTGCAATTGTCGGTAGCAGCATTCCCTTGGAAGATTCACTGTGGGATTGATATCATTCCTGTTGGTTATGATTTGATTTGTAAAACATTTTATCCCAGATTGGTTGGAATTCATTGTAATAATGTTTTCAGGCTCAGCTTGAGGGATTAATAATGTTGATGCATTCGATATTTTGTTGTGTGCTCCCGCTACTAACATTTGTGGGGGTATAAGGATAGAAATGGGAAGCCTGAGAACATGATGTTAGGGCATAGGAATAGGATTAATGTGTGATTGTTTAGGCCTTTGAGAATGAGAATTTTGGAGATTTTTATTTCATTTGGCTGTCTAAACTATTATATTTTTGTCCTAAACTAATTCATTATATAAAGTTTATTTACCCTGTATGATAGGATCGGGGGTTTCGAAGCAAAAATCATATGATTGCTAACACATCAATATGTTAATCTCAATTTATTGTACAAATGTAAATCAACATTGTTGTTTTTATTTAATTCTAG

Coding sequence (CDS)

ATGTCGAAACTTTTTGGGAAAATTGCTGCTTTCTTCAGCAATAGAACTCTGGTGGGAGTGGACAAAGCGGGAAACAGATACTTCTTCGTAAAAGAAGAAATAGATGGTATAATGAAAGAGAAGAGATGGGTGCTATTTAAGGGTGAGGATGATCCAACATCAATTCCAGTGGAGTGGATATGTTGGTTAAATGGGCAGCGTAAAAAGGCTCCAACCCCAGAGGAAATGAGGGAGCTAGAAGCTAGGCGTGAACGTGTACGACAAAATGTTGCTCTTCTCAAGAAAGAAGAGATGGAAAGAAACTCTAAAGAAGGCAATTTACGGAAAATCATCAGCACCGGTCAAGTTATGGGTCCTGACTTGAAAAGCTTTATCCGACAGGTCCCAACTGGTTCAGAAGGTGCCCAAGATGTGGAAGGATTGCCTACAAGGGATAGCCTGAGGTGGGCCATTCATTTTGAATTTTATACTGCTATTTTCTATATTGGTGAGGTGACATAA

Protein sequence

MSKLFGKIAAFFSNRTLVGVDKAGNRYFFVKEEIDGIMKEKRWVLFKGEDDPTSIPVEWICWLNGQRKKAPTPEEMRELEARRERVRQNVALLKKEEMERNSKEGNLRKIISTGQVMGPDLKSFIRQVPTGSEGAQDVEGLPTRDSLRWAIHFEFYTAIFYIGEVT*

Homology

[Close]

BLAST of CsGy3G005190 vs. ExPASy Swiss-Prot
Match: Q54MV7 (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12 OS=Dictyostelium discoideum OX=44689 GN=ndufa12 PE=2 SV=2)

HSP 1 Score: 48.5 bits (114), Expect = 8.4e-05
Identity = 26/59 (44.07%), Postives = 36/59 (61.02%), Query Frame = 0


Query: 16 TLVGVDKAGNRYFFVKEEIDGIMKEKRWVLFKG--EDDPTSIPVEWICWLNGQRKKAPT 73
          TLVGVDK GNRY+  ++EI G     RWV +     +DPT+IP E+  W++    K P+
Sbjct: 33 TLVGVDKVGNRYYENRQEIYG---RHRWVEYGDYKSNDPTTIPPEYHSWIHHVSDKLPS 88

[Close]

BLAST of CsGy3G005190 vs. NCBI nr
Match: XP_004152928.1 (uncharacterized protein LOC101214441 isoform X2 [Cucumis sativus] >KGN56129.1 hypothetical protein Csa_010369 [Cucumis sativus])

HSP 1 Score: 293 bits (751), Expect = 3.15e-99
Identity = 148/148 (100.00%), Postives = 148/148 (100.00%), Query Frame = 0


Query: 1   MSKLFGKIAAFFSNRTLVGVDKAGNRYFFVKEEIDGIMKEKRWVLFKGEDDPTSIPVEWI 60
           MSKLFGKIAAFFSNRTLVGVDKAGNRYFFVKEEIDGIMKEKRWVLFKGEDDPTSIPVEWI
Sbjct: 1   MSKLFGKIAAFFSNRTLVGVDKAGNRYFFVKEEIDGIMKEKRWVLFKGEDDPTSIPVEWI 60

Query: 61  CWLNGQRKKAPTPEEMRELEARRERVRQNVALLKKEEMERNSKEGNLRKIISTGQVMGPD 120
           CWLNGQRKKAPTPEEMRELEARRERVRQNVALLKKEEMERNSKEGNLRKIISTGQVMGPD
Sbjct: 61  CWLNGQRKKAPTPEEMRELEARRERVRQNVALLKKEEMERNSKEGNLRKIISTGQVMGPD 120

Query: 121 LKSFIRQVPTGSEGAQDVEGLPTRDSLR 148
           LKSFIRQVPTGSEGAQDVEGLPTRDSLR
Sbjct: 121 LKSFIRQVPTGSEGAQDVEGLPTRDSLR 148

[Close]

BLAST of CsGy3G005190 vs. NCBI nr
Match: XP_031738721.1 (uncharacterized protein LOC101214441 isoform X1 [Cucumis sativus])

HSP 1 Score: 293 bits (751), Expect = 6.95e-99
Identity = 148/148 (100.00%), Postives = 148/148 (100.00%), Query Frame = 0


Query: 1   MSKLFGKIAAFFSNRTLVGVDKAGNRYFFVKEEIDGIMKEKRWVLFKGEDDPTSIPVEWI 60
           MSKLFGKIAAFFSNRTLVGVDKAGNRYFFVKEEIDGIMKEKRWVLFKGEDDPTSIPVEWI
Sbjct: 1   MSKLFGKIAAFFSNRTLVGVDKAGNRYFFVKEEIDGIMKEKRWVLFKGEDDPTSIPVEWI 60

Query: 61  CWLNGQRKKAPTPEEMRELEARRERVRQNVALLKKEEMERNSKEGNLRKIISTGQVMGPD 120
           CWLNGQRKKAPTPEEMRELEARRERVRQNVALLKKEEMERNSKEGNLRKIISTGQVMGPD
Sbjct: 61  CWLNGQRKKAPTPEEMRELEARRERVRQNVALLKKEEMERNSKEGNLRKIISTGQVMGPD 120

Query: 121 LKSFIRQVPTGSEGAQDVEGLPTRDSLR 148
           LKSFIRQVPTGSEGAQDVEGLPTRDSLR
Sbjct: 121 LKSFIRQVPTGSEGAQDVEGLPTRDSLR 148

[Close]

BLAST of CsGy3G005190 vs. NCBI nr
Match: KAA0033972.1 (NDUFA12 domain-containing protein [Cucumis melo var. makuwa])

HSP 1 Score: 285 bits (729), Expect = 7.09e-96
Identity = 143/148 (96.62%), Postives = 145/148 (97.97%), Query Frame = 0


Query: 1   MSKLFGKIAAFFSNRTLVGVDKAGNRYFFVKEEIDGIMKEKRWVLFKGEDDPTSIPVEWI 60
           MSKLFGKIA FFSNRTLVGVDKAGNRYFFVKEEIDGIMKEKRWV+FKGEDDPTSIPVEWI
Sbjct: 1   MSKLFGKIAGFFSNRTLVGVDKAGNRYFFVKEEIDGIMKEKRWVVFKGEDDPTSIPVEWI 60

Query: 61  CWLNGQRKKAPTPEEMRELEARRERVRQNVALLKKEEMERNSKEGNLRKIISTGQVMGPD 120
           CWLNGQRKKAPTPEEM ELEARRERVRQNVALLKKEEMERNSKEG LRKIISTGQVMGPD
Sbjct: 61  CWLNGQRKKAPTPEEMMELEARRERVRQNVALLKKEEMERNSKEGKLRKIISTGQVMGPD 120

Query: 121 LKSFIRQVPTGSEGAQDVEGLPTRDSLR 148
           LKSFIRQVPTGSEGAQDVEGLPTRD+LR
Sbjct: 121 LKSFIRQVPTGSEGAQDVEGLPTRDTLR 148

[Close]

BLAST of CsGy3G005190 vs. NCBI nr
Match: XP_038903174.1 (uncharacterized protein LOC120089839 isoform X2 [Benincasa hispida])

HSP 1 Score: 281 bits (719), Expect = 2.37e-94
Identity = 142/148 (95.95%), Postives = 143/148 (96.62%), Query Frame = 0


Query: 1   MSKLFGKIAAFFSNRTLVGVDKAGNRYFFVKEEIDGIMKEKRWVLFKGEDDPTSIPVEWI 60
           MSKLFGKIA FFSNRTLVGVDKAGNRYFFVKEEIDGIMKEKRWV+FKGEDDPTSIPVEWI
Sbjct: 1   MSKLFGKIAGFFSNRTLVGVDKAGNRYFFVKEEIDGIMKEKRWVVFKGEDDPTSIPVEWI 60

Query: 61  CWLNGQRKKAPTPEEMRELEARRERVRQNVALLKKEEMERNSKEGNLRKIISTGQVMGPD 120
           CWLNGQRKKAPTPEEM ELEARRERVRQNVALLKKEEMERNSKEGNLRKIISTGQV GPD
Sbjct: 61  CWLNGQRKKAPTPEEMMELEARRERVRQNVALLKKEEMERNSKEGNLRKIISTGQVAGPD 120

Query: 121 LKSFIRQVPTGSEGAQDVEGLPTRDSLR 148
           LKSFIRQ PTGSEGAQDVEGL TRDSLR
Sbjct: 121 LKSFIRQFPTGSEGAQDVEGLTTRDSLR 148

[Close]

BLAST of CsGy3G005190 vs. NCBI nr
Match: XP_038903173.1 (uncharacterized protein LOC120089839 isoform X1 [Benincasa hispida])

HSP 1 Score: 281 bits (719), Expect = 3.01e-94
Identity = 142/148 (95.95%), Postives = 143/148 (96.62%), Query Frame = 0


Query: 1   MSKLFGKIAAFFSNRTLVGVDKAGNRYFFVKEEIDGIMKEKRWVLFKGEDDPTSIPVEWI 60
           MSKLFGKIA FFSNRTLVGVDKAGNRYFFVKEEIDGIMKEKRWV+FKGEDDPTSIPVEWI
Sbjct: 1   MSKLFGKIAGFFSNRTLVGVDKAGNRYFFVKEEIDGIMKEKRWVVFKGEDDPTSIPVEWI 60

Query: 61  CWLNGQRKKAPTPEEMRELEARRERVRQNVALLKKEEMERNSKEGNLRKIISTGQVMGPD 120
           CWLNGQRKKAPTPEEM ELEARRERVRQNVALLKKEEMERNSKEGNLRKIISTGQV GPD
Sbjct: 61  CWLNGQRKKAPTPEEMMELEARRERVRQNVALLKKEEMERNSKEGNLRKIISTGQVAGPD 120

Query: 121 LKSFIRQVPTGSEGAQDVEGLPTRDSLR 148
           LKSFIRQ PTGSEGAQDVEGL TRDSLR
Sbjct: 121 LKSFIRQFPTGSEGAQDVEGLTTRDSLR 148

[Close]

BLAST of CsGy3G005190 vs. ExPASy TrEMBL
Match: A0A0A0L526 (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12 OS=Cucumis sativus OX=3659 GN=Csa_3G077630 PE=3 SV=1)

HSP 1 Score: 293 bits (751), Expect = 1.52e-99
Identity = 148/148 (100.00%), Postives = 148/148 (100.00%), Query Frame = 0


Query: 1   MSKLFGKIAAFFSNRTLVGVDKAGNRYFFVKEEIDGIMKEKRWVLFKGEDDPTSIPVEWI 60
           MSKLFGKIAAFFSNRTLVGVDKAGNRYFFVKEEIDGIMKEKRWVLFKGEDDPTSIPVEWI
Sbjct: 1   MSKLFGKIAAFFSNRTLVGVDKAGNRYFFVKEEIDGIMKEKRWVLFKGEDDPTSIPVEWI 60

Query: 61  CWLNGQRKKAPTPEEMRELEARRERVRQNVALLKKEEMERNSKEGNLRKIISTGQVMGPD 120
           CWLNGQRKKAPTPEEMRELEARRERVRQNVALLKKEEMERNSKEGNLRKIISTGQVMGPD
Sbjct: 61  CWLNGQRKKAPTPEEMRELEARRERVRQNVALLKKEEMERNSKEGNLRKIISTGQVMGPD 120

Query: 121 LKSFIRQVPTGSEGAQDVEGLPTRDSLR 148
           LKSFIRQVPTGSEGAQDVEGLPTRDSLR
Sbjct: 121 LKSFIRQVPTGSEGAQDVEGLPTRDSLR 148

[Close]

BLAST of CsGy3G005190 vs. ExPASy TrEMBL
Match: A0A5A7SS01 (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold400G00330 PE=3 SV=1)

HSP 1 Score: 285 bits (729), Expect = 3.43e-96
Identity = 143/148 (96.62%), Postives = 145/148 (97.97%), Query Frame = 0


Query: 1   MSKLFGKIAAFFSNRTLVGVDKAGNRYFFVKEEIDGIMKEKRWVLFKGEDDPTSIPVEWI 60
           MSKLFGKIA FFSNRTLVGVDKAGNRYFFVKEEIDGIMKEKRWV+FKGEDDPTSIPVEWI
Sbjct: 1   MSKLFGKIAGFFSNRTLVGVDKAGNRYFFVKEEIDGIMKEKRWVVFKGEDDPTSIPVEWI 60

Query: 61  CWLNGQRKKAPTPEEMRELEARRERVRQNVALLKKEEMERNSKEGNLRKIISTGQVMGPD 120
           CWLNGQRKKAPTPEEM ELEARRERVRQNVALLKKEEMERNSKEG LRKIISTGQVMGPD
Sbjct: 61  CWLNGQRKKAPTPEEMMELEARRERVRQNVALLKKEEMERNSKEGKLRKIISTGQVMGPD 120

Query: 121 LKSFIRQVPTGSEGAQDVEGLPTRDSLR 148
           LKSFIRQVPTGSEGAQDVEGLPTRD+LR
Sbjct: 121 LKSFIRQVPTGSEGAQDVEGLPTRDTLR 148

[Close]

BLAST of CsGy3G005190 vs. ExPASy TrEMBL
Match: A0A5D3BTS9 (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold925G00260 PE=3 SV=1)

HSP 1 Score: 261 bits (668), Expect = 6.09e-87
Identity = 133/148 (89.86%), Postives = 135/148 (91.22%), Query Frame = 0


Query: 1   MSKLFGKIAAFFSNRTLVGVDKAGNRYFFVKEEIDGIMKEKRWVLFKGEDDPTSIPVEWI 60
           MSKLFGKIA FFSNRTLVGVDKAGNRYFFVKEEIDGIMKEKRWV+FKGEDDPTSIPVEWI
Sbjct: 1   MSKLFGKIAGFFSNRTLVGVDKAGNRYFFVKEEIDGIMKEKRWVVFKGEDDPTSIPVEWI 60

Query: 61  CWLNGQRKKAPTPEEMRELEARRERVRQNVALLKKEEMERNSKEGNLRKIISTGQVMGPD 120
           CWLNGQRKKAPTPEEM ELEARRERVRQNVALLKKEEMERNSKEG LRKIISTGQVMGPD
Sbjct: 61  CWLNGQRKKAPTPEEMMELEARRERVRQNVALLKKEEMERNSKEGKLRKIISTGQVMGPD 120

Query: 121 LKSFIRQVPTGSEGAQDVEGLPTRDSLR 148
           LKSFIRQVPTGSEG Q       R+  R
Sbjct: 121 LKSFIRQVPTGSEGTQTKRSQFKRNQFR 148

[Close]

BLAST of CsGy3G005190 vs. ExPASy TrEMBL
Match: A0A6J1DNE9 (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12 OS=Momordica charantia OX=3673 GN=LOC111022834 PE=3 SV=1)

HSP 1 Score: 249 bits (637), Expect = 3.54e-82
Identity = 123/148 (83.11%), Postives = 134/148 (90.54%), Query Frame = 0


Query: 1   MSKLFGKIAAFFSNRTLVGVDKAGNRYFFVKEEIDGIMKEKRWVLFKGEDDPTSIPVEWI 60
           MSKLFGKIA+FFS+RT+ GVDK+GN+YFF KEEIDG+MKEKRWV+FKGEDDPTSIPVEWI
Sbjct: 1   MSKLFGKIASFFSSRTMAGVDKSGNKYFFRKEEIDGLMKEKRWVVFKGEDDPTSIPVEWI 60

Query: 61  CWLNGQRKKAPTPEEMRELEARRERVRQNVALLKKEEMERNSKEGNLRKIISTGQVMGPD 120
           CWLNGQRKKAPTPEEM ELEARRERVRQNV LLKK+EMERNS+EGNLRK+IS  QV GPD
Sbjct: 61  CWLNGQRKKAPTPEEMMELEARRERVRQNVTLLKKQEMERNSREGNLRKVISADQVAGPD 120

Query: 121 LKSFIRQVPTGSEGAQDVEGLPTRDSLR 148
           L SFIRQ PTGSEGAQD EG   R+S R
Sbjct: 121 LNSFIRQFPTGSEGAQDEEGSAARNSPR 148

[Close]

BLAST of CsGy3G005190 vs. ExPASy TrEMBL
Match: A0A6J1JVV8 (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12 OS=Cucurbita maxima OX=3661 GN=LOC111487996 PE=3 SV=1)

HSP 1 Score: 249 bits (636), Expect = 4.70e-82
Identity = 127/148 (85.81%), Postives = 135/148 (91.22%), Query Frame = 0


Query: 1   MSKLFGKIAAFFSNRTLVGVDKAGNRYFFVKEEIDGIMKEKRWVLFKGEDDPTSIPVEWI 60
           MSKLF KIA FF++RTL+GVDKAGNRYFFVKEEIDGIMKEKRWV+FKGEDDPTSIPVEWI
Sbjct: 1   MSKLFKKIAGFFTDRTLMGVDKAGNRYFFVKEEIDGIMKEKRWVVFKGEDDPTSIPVEWI 60

Query: 61  CWLNGQRKKAPTPEEMRELEARRERVRQNVALLKKEEMERNSKEGNLRKIISTGQVMGPD 120
           CWLNGQRKKAPTPEEM ELEARRERVRQNVALLKKEEMER SKE NLRK++ST  V GP+
Sbjct: 61  CWLNGQRKKAPTPEEMMELEARRERVRQNVALLKKEEMERKSKESNLRKVVST--VAGPN 120

Query: 121 LKSFIRQVPTGSEGAQDVEGLPTRDSLR 148
           LKSFIRQ PTGSEGAQD EG   +DSLR
Sbjct: 121 LKSFIRQFPTGSEGAQDNEGSAAKDSLR 146

[Close]

BLAST of CsGy3G005190 vs. TAIR 10
Match: AT4G26965.1 (NADH:ubiquinone oxidoreductase, 17.2kDa subunit )

HSP 1 Score: 183.7 bits (465), Expect = 1.2e-46
Identity = 92/152 (60.53%), Postives = 113/152 (74.34%), Query Frame = 0


Query: 1   MSKLFGKIAAFFSNRTLVGVDKAGNRYFFVKEEIDGIMKEKRWVLFKGEDDPTSIPVEWI 60
           MS+L+ + A  FS+++ +GVDK GN+YF   EEIDG +KEKRWV F+ E+DPTSIPVEWI
Sbjct: 1   MSRLWARFAGLFSSKSFIGVDKTGNKYFSRMEEIDGFVKEKRWVKFRREEDPTSIPVEWI 60

Query: 61  CWLNGQRKKAPTPEEMRELEARRERVRQNVALLKKEEMERNSKEGNLRKIISTGQVMGPD 120
           CWLNGQRK+APTPEEM ELEARRERV+ NVALLKKEE E+ ++ G  RK I+ G+V GPD
Sbjct: 61  CWLNGQRKRAPTPEEMIELEARRERVKLNVALLKKEEEEKKARVGTGRK-ITIGKVDGPD 120

Query: 121 LKSFIRQVPTGSEGAQDVEGLPTRDSLRWAIH 153
           L SF+RQ P  S+G +  E     D  R   H
Sbjct: 121 LTSFVRQFPPDSKGGEPEEASEEADKSRAKEH 151

[Close]

BLAST of CsGy3G005190 vs. TAIR 10
Match: AT4G26965.2 (NADH:ubiquinone oxidoreductase, 17.2kDa subunit )

HSP 1 Score: 143.7 bits (361), Expect = 1.4e-34
Identity = 74/115 (64.35%), Postives = 86/115 (74.78%), Query Frame = 0


Query: 38  MKEKRWVLFKGEDDPTSIPVEWICWLNGQRKKAPTPEEMRELEARRERVRQNVALLKKEE 97
           MKEKRWV F+ E+DPTSIPVEWICWLNGQRK+APTPEEM ELEARRERV+ NVALLKKEE
Sbjct: 1   MKEKRWVKFRREEDPTSIPVEWICWLNGQRKRAPTPEEMIELEARRERVKLNVALLKKEE 60

Query: 98  MERNSKEGNLRKIISTGQVMGPDLKSFIRQVPTGSEGAQDVEGLPTRDSLRWAIH 153
            E+ ++ G  RK I+ G+V GPDL SF+RQ P  S+G +  E     D  R   H
Sbjct: 61  EEKKARVGTGRK-ITIGKVDGPDLTSFVRQFPPDSKGGEPEEASEEADKSRAKEH 114

The following BLAST results are available for this feature:

BLAST of CsGy3G005190 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q54MV7	8.4e-05	44.07	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12 OS=Dictyostelium d...	[more]

BLAST of CsGy3G005190 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004152928.1	3.15e-99	100.00	uncharacterized protein LOC101214441 isoform X2 [Cucumis sativus] >KGN56129.1 hy...	[more]
XP_031738721.1	6.95e-99	100.00	uncharacterized protein LOC101214441 isoform X1 [Cucumis sativus]	[more]
KAA0033972.1	7.09e-96	96.62	NDUFA12 domain-containing protein [Cucumis melo var. makuwa]	[more]
XP_038903174.1	2.37e-94	95.95	uncharacterized protein LOC120089839 isoform X2 [Benincasa hispida]	[more]
XP_038903173.1	3.01e-94	95.95	uncharacterized protein LOC120089839 isoform X1 [Benincasa hispida]	[more]

BLAST of CsGy3G005190 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L526	1.52e-99	100.00	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12 OS=Cucumis sativus...	[more]
A0A5A7SS01	3.43e-96	96.62	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12 OS=Cucumis melo va...	[more]
A0A5D3BTS9	6.09e-87	89.86	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12 OS=Cucumis melo va...	[more]
A0A6J1DNE9	3.54e-82	83.11	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12 OS=Momordica chara...	[more]
A0A6J1JVV8	4.70e-82	85.81	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12 OS=Cucurbita maxim...	[more]

BLAST of CsGy3G005190 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G26965.1	1.2e-46	60.53	NADH:ubiquinone oxidoreductase, 17.2kDa subunit	[more]
AT4G26965.2	1.4e-34	64.35	NADH:ubiquinone oxidoreductase, 17.2kDa subunit	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (Gy14) v2.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 76..96
None	No IPR available	PANTHER	PTHR12910:SF1	NADH DEHYDROGENASE [UBIQUINONE] 1 ALPHA SUBCOMPLEX SUBUNIT 12	coord: 1..136
IPR007763	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12	PFAM	PF05071	NDUFA12	coord: 16..95 e-value: 2.5E-12 score: 47.6
IPR007763	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12	PANTHER	PTHR12910	NADH-UBIQUINONE OXIDOREDUCTASE SUBUNIT B17.2	coord: 1..136

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsGy3G005190.2	CsGy3G005190.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0032981	mitochondrial respiratory chain complex I assembly
cellular_component	GO:0005743	mitochondrial inner membrane
cellular_component	GO:0070469	respirasome
cellular_component	GO:0016020	membrane