CsGy3G003360 (gene) Cucumber (Gy14) v2.1

Overview
NameCsGy3G003360
Typegene
OrganismCucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
DescriptionTranscription initiation factor TFIID subunit 11
LocationGy14Chr3: 2701209 .. 2704390 (+)
RNA-Seq ExpressionCsGy3G003360
SyntenyCsGy3G003360
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATTTGGAAAAATAAAAGAAAAACCCCGAAGTCTATCGTTCATTCCCATTCTCTTCCCACACCCCATTCGGCGAACTATCTCACTCCTCATCGCCCGGCACAAACTACATCAGATCGTTCCTTGCGATCATTTTTAACCTAATTAGAAACATTTCACAAGAATGAAGCAATCGAAGGATCCATTTGAAGCCGCCTTCGAAGAGCAGGAGGAATCACCTCCGAACTCTCCTTCTGCTGCCGACGACCTCGAAATTCCGACCACTGTAGCCCCTTCTCCTGCCGACGCTTTTGATTTGCAAGACGGTGATGATGATCCAAAATCCGCTTCTGTCGCTACACATTCCGTTGCTCCTGCGTCCACCACTTCTATGTTTGTTTCCTCTTCCTCCCATGTATCTACCGCCCCTAAAACCAAAGAAGACGACGAGGAAGAAGAGGAAGAGAATGTTGAAGTTGAACTTGCAAAATTTCCCTCCAGCGGTGATCCGGATAAGATGGCAAAGATGCAGTATGTTCTCTTGGACCTCTCATATATAATTTTAAATTGGTTTTTCTGCTTCAAGATGAGCTAGCATAGTCTCAATGTTTACCCTTGTGGGAAAAAAGTACTCGATTTACTTGATGTTTAAAATGTTGGTAGCATGTAGCCCTTTGGTCGGGTTATTATCAGTTGATTTACATGTGTTGATTATGAACTAATTCTTTATTTAGTTTCTCCAATAGAAAATTTAGGAAGATAGAAATTTACGAATCCCTAATGCCTGCCTATATTTTGCTTTTGGACCTGGTGTAGCGTTTGGATCTTGCTGTTTGATCTTCTTCCAAATTATTAGGTGTTCCCATTAAGAATAGTGCAATAGCCTTACATTGATGTTCTTCATCCAGAGATCCAAAAGATGTCCTTTTCTCTGAGAAATCTCCGACCCCATTTGATTAGAAAAGCACGATTGTTTCTTAGTAGTGAGGTTGCTAATATCCAAACCTCCCATTTCAGTTGGAAGAGAGGTAGTTTCCCAATTAATCATATTAGTGACCCCGAACTCCTTACTACCTTTTCAGAAGAAGTCTCTAATAAGTTTCTCGAGCCAATTAATCACACTGTTGGGACAAAGAAATAGTAAAGTGGGATGCTAGCAAGAATAGACACAGCTGAAGTAATTTACCCCCTCTAGAGGAGAAGATTCTTCCAATGCTACAACTTTTGGTTGCAAAAAAGAGAAAGTCTTGAATTTACCACCAAGAGGCATGCCCACGTACTCAAGAGGCCATAAGCTAGCCACACAACCCCTCTCCTACGCCACTGTTGAAGCCTTCTACAAATATTAAGCCCAACCAAGAGAGTTTTTGAGAGATAAAACTCTTAAGCCTGACATCACCACATAACCTGTAACTATGTTCTTCAAGTTATTGAACAGGGGTAGATTGTAGTTCGAAAAGCGAAGCGTGTCATCAGCAAATTACACCTCTCCATCTCTAATGGGAAGGTCCTTCATGAAGTCATCCCTCAGAACTTTGTTAATAAGCCTGCCAAAGACATCCACTATCAACATGAAAGAGAGAGGGGCAAGCGGAACACCTTGCCTAAGCCCTTTAGCAGCTTTGATTTGTCCTCTTGGATCATAATAGAGGAGGTGTTAGAATGTTAGTGATAGAAGCTTTGATCCAACCAATCCAATGACCGCCATAGCCTTTACAATTTAGCACCTCAAGGAGAAAGTCCTAGATTCCTACCCAACCATATCCAAAGGCCCCTTCTCAAAATCCAGCTTGATGAAAACCCAACCCTTCTTCTTTCTATTAATAAAACCATCAAAAAACTTGTAAGCAACCAAAATCAAGAATTTGTCTTTTTTTTCCTTTTTCTTCTTCCTTTTGTTGTGCCTGCAACTTTAAAGATGAATATGCTAGATCATTTTTACTTTGGTATCTTTTTGAGTGAACTAACACATTATGAAATCTTCACTTAGAGAAAGAATCCTCTTGTAACTCGTCTTATCATTTTCCAGAGCAATTCTCTCACAATTTACAGAAGAACAGATGAGTCGTTACGAGTCCTTTCGCAGAGCTGGATTTCAGAAAGCTAATATGAAAAGGGTACGGATCTTAATATTTTCTCTTTTCGAAAAACCATAGATAGCCAAGGAAGGTTGGGGTGGAATGCATTCTAGGTATTGGTTGGTTGGATGGTTTGTTTTATTATTATTTTTTCAATTTCTGGTCTGAGACGTTAATCTTTTTGAACTTGAACCCAGCTCATCTTGTTTCATTTCACTTGTAAGCTGTAGCTGTTAGCAAGCATCTCGGGAACACAGAAAATTTCTGTACCGATGACAATCGTTGTGTCTGGTATAGCAAAGATGTTTGTTGGTGAACTCGTAGAAACAGGTATGTAAAAACCCAATTCCATTGTTCTTTCCAGTTACTTTTTATGTCAATGTGAAACATAGACCTAAGAATCTGAATTTTTTTAAAAAAATCTAACTTATTTCAATACTTTTTATTTTGTTTCAGCAAGAGTTGTTATGACAGAGCGTAATGATACGGGACCTATCAGACCATGCCATCTCAGAGAAGCATATAGAAGACTAAAGCTTGAAGGTAAGATTCCTAGGAAATCAGTGCCTAGGCTCTTTCGCTAATCACTCTGTTTAATTTAGGAGTTTTTGGAAGAAAATTTGAATACTACAGCATCAATATTAGGATGTTTATATATATATAACTGAAGTTCCTAACATATTTTTGTACGAATCGACTTCTCACTTTACTACATACACGAATTATTGGAAGGAGTAAAACACAAACATGGATTTTCCAGCACAACCTATACATTTAAATAGTAAAACACATTTGATGATTATATAGAGTTGGAATACAAAGACACATACTGGCGTGTTCGGGAGGATGGAATGAAATGAGTTTGTAATGAATTTTATTCCATGCCCATACAGATTTGAGCGTTTTGGGCTTGGTTTGTAATACTAAACTCATTTCTTTTTCACATTTTTCAATCCAACTATTTTCTTCGTAACGTTTCACTATCTCATTTTTGTTTTGCCCTCGATTATCCACTTATTCCAACTCTCCATATATTCCCACTAATCCTAATTATATTTCAATTTTCCTAAACCAGTATTTTGATAATAATAATACCCAATGTTGATATGTGACAATCTTATAATGTGT

mRNA sequence

ATTTGGAAAAATAAAAGAAAAACCCCGAAGTCTATCGTTCATTCCCATTCTCTTCCCACACCCCATTCGGCGAACTATCTCACTCCTCATCGCCCGGCACAAACTACATCAGATCGTTCCTTGCGATCATTTTTAACCTAATTAGAAACATTTCACAAGAATGAAGCAATCGAAGGATCCATTTGAAGCCGCCTTCGAAGAGCAGGAGGAATCACCTCCGAACTCTCCTTCTGCTGCCGACGACCTCGAAATTCCGACCACTGTAGCCCCTTCTCCTGCCGACGCTTTTGATTTGCAAGACGGTGATGATGATCCAAAATCCGCTTCTGTCGCTACACATTCCGTTGCTCCTGCGTCCACCACTTCTATGTTTGTTTCCTCTTCCTCCCATGTATCTACCGCCCCTAAAACCAAAGAAGACGACGAGGAAGAAGAGGAAGAGAATGTTGAAGTTGAACTTGCAAAATTTCCCTCCAGCGGTGATCCGGATAAGATGGCAAAGATGCAAGCAATTCTCTCACAATTTACAGAAGAACAGATGAGTCGTTACGAGTCCTTTCGCAGAGCTGGATTTCAGAAAGCTAATATGAAAAGGCTGTTAGCAAGCATCTCGGGAACACAGAAAATTTCTGTACCGATGACAATCGTTGTGTCTGGTATAGCAAAGATGTTTGTTGGTGAACTCGTAGAAACAGCAAGAGTTGTTATGACAGAGCGTAATGATACGGGACCTATCAGACCATGCCATCTCAGAGAAGCATATAGAAGACTAAAGCTTGAAGGTAAGATTCCTAGGAAATCAGTGCCTAGGCTCTTTCGCTAATCACTCTGTTTAATTTAGGAGTTTTTGGAAGAAAATTTGAATACTACAGCATCAATATTAGGATGTTTATATATATATAACTGAAGTTCCTAACATATTTTTGTACGAATCGACTTCTCACTTTACTACATACACGAATTATTGGAAGGAGTAAAACACAAACATGGATTTTCCAGCACAACCTATACATTTAAATAGTAAAACACATTTGATGATTATATAGAGTTGGAATACAAAGACACATACTGGCGTGTTCGGGAGGATGGAATGAAATGAGTTTGTAATGAATTTTATTCCATGCCCATACAGATTTGAGCGTTTTGGGCTTGGTTTGTAATACTAAACTCATTTCTTTTTCACATTTTTCAATCCAACTATTTTCTTCGTAACGTTTCACTATCTCATTTTTGTTTTGCCCTCGATTATCCACTTATTCCAACTCTCCATATATTCCCACTAATCCTAATTATATTTCAATTTTCCTAAACCAGTATTTTGATAATAATAATACCCAATGTTGATATGTGACAATCTTATAATGTGT

Coding sequence (CDS)

ATGAAGCAATCGAAGGATCCATTTGAAGCCGCCTTCGAAGAGCAGGAGGAATCACCTCCGAACTCTCCTTCTGCTGCCGACGACCTCGAAATTCCGACCACTGTAGCCCCTTCTCCTGCCGACGCTTTTGATTTGCAAGACGGTGATGATGATCCAAAATCCGCTTCTGTCGCTACACATTCCGTTGCTCCTGCGTCCACCACTTCTATGTTTGTTTCCTCTTCCTCCCATGTATCTACCGCCCCTAAAACCAAAGAAGACGACGAGGAAGAAGAGGAAGAGAATGTTGAAGTTGAACTTGCAAAATTTCCCTCCAGCGGTGATCCGGATAAGATGGCAAAGATGCAAGCAATTCTCTCACAATTTACAGAAGAACAGATGAGTCGTTACGAGTCCTTTCGCAGAGCTGGATTTCAGAAAGCTAATATGAAAAGGCTGTTAGCAAGCATCTCGGGAACACAGAAAATTTCTGTACCGATGACAATCGTTGTGTCTGGTATAGCAAAGATGTTTGTTGGTGAACTCGTAGAAACAGCAAGAGTTGTTATGACAGAGCGTAATGATACGGGACCTATCAGACCATGCCATCTCAGAGAAGCATATAGAAGACTAAAGCTTGAAGGTAAGATTCCTAGGAAATCAGTGCCTAGGCTCTTTCGCTAA

Protein sequence

MKQSKDPFEAAFEEQEESPPNSPSAADDLEIPTTVAPSPADAFDLQDGDDDPKSASVATHSVAPASTTSMFVSSSSHVSTAPKTKEDDEEEEEENVEVELAKFPSSGDPDKMAKMQAILSQFTEEQMSRYESFRRAGFQKANMKRLLASISGTQKISVPMTIVVSGIAKMFVGELVETARVVMTERNDTGPIRPCHLREAYRRLKLEGKIPRKSVPRLFR*
Homology
[Close]
BLAST of CsGy3G003360 vs. ExPASy Swiss-Prot
Match: Q9M565 (Transcription initiation factor TFIID subunit 11 OS=Arabidopsis thaliana OX=3702 GN=TAF11 PE=1 SV=1)

HSP 1 Score: 216.1 bits (549), Expect = 4.0e-55
Identity = 131/230 (56.96%), Postives = 160/230 (69.57%), Query Frame = 0 

Query: 1   MKQSKDPFEAAF-EEQEESPPNSP---------SAADDLEIPTTVAPSPADAFDLQDGDD 60
           MK SKDPFEAA  EEQEESPP SP         S    +EI  T           QD D+
Sbjct: 1   MKHSKDPFEAAIEEEQEESPPESPVGGGGGGDGSEDGRIEIDQT-----------QDEDE 60

Query: 61  DPKSASVATHSVAPASTTSMFVSSSSHVSTAPKTKEDDEEEEEENVEVELAKFPSSGDPD 120
            P    V        + TS+ V+ + +     K K++D+EEEEEN++VEL K+P+S DP 
Sbjct: 61  RP----VDVRRPMKKAKTSVVVTEAKN-----KDKDEDDEEEEENMDVELTKYPTSSDPA 120

Query: 121 KMAKMQAILSQFTEEQMSRYESFRRAGFQKANMKRLLASISGTQKISVPMTIVVSGIAKM 180
           KMAKMQ ILSQFTE+QMSRYESFRR+  Q+  MK+LL  ++G+QKI +PM IV  GIAKM
Sbjct: 121 KMAKMQTILSQFTEDQMSRYESFRRSALQRPQMKKLLIGVTGSQKIGMPMIIVACGIAKM 180

Query: 181 FVGELVETARVVMTERNDTGPIRPCHLREAYRRLKLEGKIPRKSVPRLFR 221
           FVGELVETARVVM ER ++GPIRPCH+RE+YRRLKLEGK+P++SVPRLFR
Sbjct: 181 FVGELVETARVVMAERKESGPIRPCHIRESYRRLKLEGKVPKRSVPRLFR 210

[Close]
BLAST of CsGy3G003360 vs. ExPASy Swiss-Prot
Match: F4HR03 (Transcription initiation factor TFIID subunit 11b OS=Arabidopsis thaliana OX=3702 GN=TAF11B PE=2 SV=1)

HSP 1 Score: 161.0 bits (406), Expect = 1.5e-38
Identity = 107/221 (48.42%), Postives = 131/221 (59.28%), Query Frame = 0 

Query: 1   MKQSKDPFEAAFEEQEESPPNSPSAADDLEIPTTVAPSPADAFDLQDGDDDPKSASVATH 60
           MK SKDPFEAA EEQEESP         +E   T+           +GD+          
Sbjct: 32  MKHSKDPFEAAMEEQEESP---------VETEQTL-----------EGDE---------- 91

Query: 61  SVAPASTTSMFVSSSSHVSTAPKTKEDDEEEEEENVEVELAKFPSSGDPDKMA-KMQAIL 120
                                 K K     E +   EVE  K  +  DP   A KMQ IL
Sbjct: 92  ------------------RAVKKCKTSVVAEAKNKDEVEFTKNITGADPVTRANKMQKIL 151

Query: 121 SQFTEEQMSRYESFRRAGFQKANMKRLLASISGTQKISVPMTIVVSGIAKMFVGELVETA 180
           SQFTEEQMSRYESFRR+GF+K++M++L+  I+G  K+   M IVV GIAKMFVG+LVETA
Sbjct: 152 SQFTEEQMSRYESFRRSGFKKSDMEKLVQRITGGPKMDDTMNIVVRGIAKMFVGDLVETA 204

Query: 181 RVVMTERNDTGPIRPCHLREAYRRLKLEGKIPRKSVPRLFR 221
           RVVM ER ++GPIRPCH+RE+YRRLKL+GK+P++SV RLFR
Sbjct: 212 RVVMRERKESGPIRPCHIRESYRRLKLQGKVPQRSVQRLFR 204

[Close]
BLAST of CsGy3G003360 vs. ExPASy Swiss-Prot
Match: Q5U1X0 (Transcription initiation factor TFIID subunit 11 OS=Rattus norvegicus OX=10116 GN=Taf11 PE=1 SV=1)

HSP 1 Score: 94.7 bits (234), Expect = 1.4e-18
Identity = 74/204 (36.27%), Postives = 117/204 (57.35%), Query Frame = 0 

Query: 9   EAAFEEQEESPPNSPSAADDLEIP-TTVAPSPADAFDLQDGDDDPKSASVATHSVAPAST 68
           E    E+  + P +P +AD   IP  T     AD+ +    + + KS  V+  + A    
Sbjct: 14  EPGESEETRATPGAPVSADTEGIPEETDQVGDADSKEAAAEESELKSQDVSDVTAAERED 73

Query: 69  TSMFVSSSSHVSTAPKTKEDDEEEEEENVEVELAKFPSSGDPDKMAKMQAILSQFTEEQM 128
            S+   +      A K K D ++++E+  +V         D D++ KMQ ++S F+EEQ+
Sbjct: 74  PSLLTPA------AKKLKLDTKDKKEKKQKV---------DEDEIQKMQILVSSFSEEQL 133

Query: 129 SRYESFRRAGFQKANMKRLLASISGTQKISVPMTIVVSGIAKMFVGELVETARVVMTERN 188
           +RYE +RR+ F KA +KRL+ SI+GT  +S  + I +SGI+K+FVGE+VE A  V  +  
Sbjct: 134 NRYEMYRRSAFPKAAIKRLIQSITGT-SVSQNVVIAMSGISKVFVGEVVEEALDVCEKWG 193

Query: 189 DTGPIRPCHLREAYRRLKLEGKIP 212
           +  P++P H+REA RRLK +G+IP
Sbjct: 194 EMPPLQPKHMREAVRRLKSKGQIP 201

[Close]
BLAST of CsGy3G003360 vs. ExPASy Swiss-Prot
Match: Q99JX1 (Transcription initiation factor TFIID subunit 11 OS=Mus musculus OX=10090 GN=Taf11 PE=1 SV=1)

HSP 1 Score: 94.4 bits (233), Expect = 1.8e-18
Identity = 75/204 (36.76%), Postives = 117/204 (57.35%), Query Frame = 0 

Query: 9   EAAFEEQEESPPNSPSAADDLEIP-TTVAPSPADAFDLQDGDDDPKSASVATHSVAPAST 68
           E    E+  + P +  AAD   IP  T     AD  +    + + KS  V+  + A    
Sbjct: 14  EPGESEETRATPGALVAADTEGIPEETDRDGDADLKEAAAEESELKSQDVSDVTAAEREN 73

Query: 69  TSMFVSSSSHVSTAPKTKEDDEEEEEENVEVELAKFPSSGDPDKMAKMQAILSQFTEEQM 128
           +S+   +      A K K D ++++E+  +V         D D++ KMQ ++S F+EEQ+
Sbjct: 74  SSLLTPA------AKKLKLDIKDKKEKKQKV---------DEDEIQKMQILVSSFSEEQL 133

Query: 129 SRYESFRRAGFQKANMKRLLASISGTQKISVPMTIVVSGIAKMFVGELVETARVVMTERN 188
           +RYE +RR+ F KA +KRL+ SI+GT  +S  + I +SGI+K+FVGE+VE A  V  +  
Sbjct: 134 NRYEMYRRSAFPKAAIKRLIQSITGT-SVSQNVVIAMSGISKVFVGEVVEEALDVCEKWG 193

Query: 189 DTGPIRPCHLREAYRRLKLEGKIP 212
           +T P++P H+REA RRLK +G+IP
Sbjct: 194 ETPPLQPKHMREAVRRLKSKGQIP 201

[Close]
BLAST of CsGy3G003360 vs. ExPASy Swiss-Prot
Match: Q5RA91 (Transcription initiation factor TFIID subunit 11 OS=Pongo abelii OX=9601 GN=TAF11 PE=2 SV=1)

HSP 1 Score: 93.2 bits (230), Expect = 3.9e-18
Identity = 72/204 (35.29%), Postives = 115/204 (56.37%), Query Frame = 0 

Query: 9   EAAFEEQEESPPNSPSAADDLEIP-TTVAPSPADAFDLQDGDDDPKSASVATHSVAPAST 68
           E    ++  + P  P A D   IP  T   + AD  +    + + KS  ++  +      
Sbjct: 14  ETGESDETAAAPGDPGATDTDGIPEDTDGDADADLKEAAAEEGELKSQDISDLTTVERED 73

Query: 69  TSMFVSSSSHVSTAPKTKEDDEEEEEENVEVELAKFPSSGDPDKMAKMQAILSQFTEEQM 128
           +S+   +      A K K D +E++E+  +V         D D++ KMQ ++S F+EEQ+
Sbjct: 74  SSLLTPA------AKKLKIDTKEKKEKKQKV---------DEDEIQKMQILVSSFSEEQL 133

Query: 129 SRYESFRRAGFQKANMKRLLASISGTQKISVPMTIVVSGIAKMFVGELVETARVVMTERN 188
           +RYE +RR+ F KA +KRL+ SI+GT  +S  + I +SGI+K+FVGE+VE A  V  +  
Sbjct: 134 NRYEMYRRSAFPKAAIKRLIQSITGT-SVSQNVVIAMSGISKVFVGEVVEEALDVCEKWG 193

Query: 189 DTGPIRPCHLREAYRRLKLEGKIP 212
           +  P++P H+REA RRLK +G+IP
Sbjct: 194 EMPPLQPKHMREAVRRLKSKGQIP 201

[Close]
BLAST of CsGy3G003360 vs. NCBI nr
Match: XP_004147964.1 (transcription initiation factor TFIID subunit 11 [Cucumis sativus])

HSP 1 Score: 407 bits (1045), Expect = 1.59e-142
Identity = 220/220 (100.00%), Postives = 220/220 (100.00%), Query Frame = 0 

Query: 1   MKQSKDPFEAAFEEQEESPPNSPSAADDLEIPTTVAPSPADAFDLQDGDDDPKSASVATH 60
           MKQSKDPFEAAFEEQEESPPNSPSAADDLEIPTTVAPSPADAFDLQDGDDDPKSASVATH
Sbjct: 1   MKQSKDPFEAAFEEQEESPPNSPSAADDLEIPTTVAPSPADAFDLQDGDDDPKSASVATH 60

Query: 61  SVAPASTTSMFVSSSSHVSTAPKTKEDDEEEEEENVEVELAKFPSSGDPDKMAKMQAILS 120
           SVAPASTTSMFVSSSSHVSTAPKTKEDDEEEEEENVEVELAKFPSSGDPDKMAKMQAILS
Sbjct: 61  SVAPASTTSMFVSSSSHVSTAPKTKEDDEEEEEENVEVELAKFPSSGDPDKMAKMQAILS 120

Query: 121 QFTEEQMSRYESFRRAGFQKANMKRLLASISGTQKISVPMTIVVSGIAKMFVGELVETAR 180
           QFTEEQMSRYESFRRAGFQKANMKRLLASISGTQKISVPMTIVVSGIAKMFVGELVETAR
Sbjct: 121 QFTEEQMSRYESFRRAGFQKANMKRLLASISGTQKISVPMTIVVSGIAKMFVGELVETAR 180

Query: 181 VVMTERNDTGPIRPCHLREAYRRLKLEGKIPRKSVPRLFR 220
           VVMTERNDTGPIRPCHLREAYRRLKLEGKIPRKSVPRLFR
Sbjct: 181 VVMTERNDTGPIRPCHLREAYRRLKLEGKIPRKSVPRLFR 220

[Close]
BLAST of CsGy3G003360 vs. NCBI nr
Match: TYK19451.1 (transcription initiation factor TFIID subunit 11 [Cucumis melo var. makuwa])

HSP 1 Score: 398 bits (1022), Expect = 5.10e-139
Identity = 215/220 (97.73%), Postives = 216/220 (98.18%), Query Frame = 0 

Query: 1   MKQSKDPFEAAFEEQEESPPNSPSAADDLEIPTTVAPSPADAFDLQDGDDDPKSASVATH 60
           MKQSKDPFEAAFEEQEESPPNSPSAADDLEIPTTVAP PADAFDLQDGDDDPKSASVATH
Sbjct: 1   MKQSKDPFEAAFEEQEESPPNSPSAADDLEIPTTVAPVPADAFDLQDGDDDPKSASVATH 60

Query: 61  SVAPASTTSMFVSSSSHVSTAPKTKEDDEEEEEENVEVELAKFPSSGDPDKMAKMQAILS 120
           SV P STTSMFVSSSSHVS APKTKEDDEEEEEENVEVELAKFPSSGDPDKMAKMQAILS
Sbjct: 61  SVTPVSTTSMFVSSSSHVSAAPKTKEDDEEEEEENVEVELAKFPSSGDPDKMAKMQAILS 120

Query: 121 QFTEEQMSRYESFRRAGFQKANMKRLLASISGTQKISVPMTIVVSGIAKMFVGELVETAR 180
           QFTEEQMSRYESFRRAGFQKANMKRLLASISGTQKISVPMTIVVSGIAKMFVGELVETAR
Sbjct: 121 QFTEEQMSRYESFRRAGFQKANMKRLLASISGTQKISVPMTIVVSGIAKMFVGELVETAR 180

Query: 181 VVMTERNDTGPIRPCHLREAYRRLKLEGKIPRKSVPRLFR 220
           VVMTERND+GPIRPCHLREAYRRLKLEGKIPRKSVPRLFR
Sbjct: 181 VVMTERNDSGPIRPCHLREAYRRLKLEGKIPRKSVPRLFR 220

[Close]
BLAST of CsGy3G003360 vs. NCBI nr
Match: XP_016900577.1 (PREDICTED: transcription initiation factor TFIID subunit 11 [Cucumis melo])

HSP 1 Score: 396 bits (1018), Expect = 2.08e-138
Identity = 214/220 (97.27%), Postives = 215/220 (97.73%), Query Frame = 0 

Query: 1   MKQSKDPFEAAFEEQEESPPNSPSAADDLEIPTTVAPSPADAFDLQDGDDDPKSASVATH 60
           MKQSKDPFEAAFEEQEESPPNSPSAADDLEIPTTVAP PADAFDLQDGDDDPKSASVATH
Sbjct: 1   MKQSKDPFEAAFEEQEESPPNSPSAADDLEIPTTVAPVPADAFDLQDGDDDPKSASVATH 60

Query: 61  SVAPASTTSMFVSSSSHVSTAPKTKEDDEEEEEENVEVELAKFPSSGDPDKMAKMQAILS 120
           SV P STTSMFVSSSSHVS APKTKEDDEEEEEENVEVELAKFPSSGDPDKMAKMQAILS
Sbjct: 61  SVTPVSTTSMFVSSSSHVSAAPKTKEDDEEEEEENVEVELAKFPSSGDPDKMAKMQAILS 120

Query: 121 QFTEEQMSRYESFRRAGFQKANMKRLLASISGTQKISVPMTIVVSGIAKMFVGELVETAR 180
           QFTEEQMSRYESFRRAGFQKANMKRLLASISGTQKISVPMTIVVSGIAKMFVGELVETAR
Sbjct: 121 QFTEEQMSRYESFRRAGFQKANMKRLLASISGTQKISVPMTIVVSGIAKMFVGELVETAR 180

Query: 181 VVMTERNDTGPIRPCHLREAYRRLKLEGKIPRKSVPRLFR 220
           VVMTERND+GPIRPCHLRE YRRLKLEGKIPRKSVPRLFR
Sbjct: 181 VVMTERNDSGPIRPCHLREVYRRLKLEGKIPRKSVPRLFR 220

[Close]
BLAST of CsGy3G003360 vs. NCBI nr
Match: XP_038904708.1 (transcription initiation factor TFIID subunit 11 isoform X2 [Benincasa hispida])

HSP 1 Score: 375 bits (963), Expect = 1.50e-129
Identity = 208/222 (93.69%), Postives = 214/222 (96.40%), Query Frame = 0 

Query: 1   MKQSKDPFEAAFEEQEESPPNSPSAADDLEIPTTVAPSPADAFDLQD-GDDDPKSASVAT 60
           MKQSKDPFEAAFEEQEESPPNSPSA DDLEIPT VAP+ ADAFDLQD GDDD KSA+VAT
Sbjct: 30  MKQSKDPFEAAFEEQEESPPNSPSAVDDLEIPTNVAPATADAFDLQDAGDDDSKSAAVAT 89

Query: 61  HSVAPASTTSMFVSSSSHVSTAPKTKEDDEEEEEENVEVELAKFPSSGDPDK-MAKMQAI 120
           HS APAS+TSMFVSSSS+VS APKTKEDD+EEEEENVEVELAKFPSSGDPDK MAKMQAI
Sbjct: 90  HSAAPASSTSMFVSSSSNVSAAPKTKEDDDEEEEENVEVELAKFPSSGDPDKNMAKMQAI 149

Query: 121 LSQFTEEQMSRYESFRRAGFQKANMKRLLASISGTQKISVPMTIVVSGIAKMFVGELVET 180
           LSQFTEEQMSRYESFRRAGFQKANMKRLLASISGTQKISVPMTIVVSGIAKMFVGELVET
Sbjct: 150 LSQFTEEQMSRYESFRRAGFQKANMKRLLASISGTQKISVPMTIVVSGIAKMFVGELVET 209

Query: 181 ARVVMTERNDTGPIRPCHLREAYRRLKLEGKIPRKSVPRLFR 220
           ARVVMTERND+GPIRPCHLREAYRRLKLEGKIPRKSVPRLFR
Sbjct: 210 ARVVMTERNDSGPIRPCHLREAYRRLKLEGKIPRKSVPRLFR 251

[Close]
BLAST of CsGy3G003360 vs. NCBI nr
Match: KAG7028341.1 (Transcription initiation factor TFIID subunit 11 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 353 bits (906), Expect = 2.68e-121
Identity = 201/223 (90.13%), Postives = 209/223 (93.72%), Query Frame = 0 

Query: 1   MKQSKDPFEAAFEEQEESPPNSPSAADDLEIPTTVAPSP-ADAFDLQDGDDDPKSASVA- 60
           MKQSKDPFEAAFEEQEESPPNSPSAADDLEI T VA +  ADA DL DGDD+PKSA+ A 
Sbjct: 1   MKQSKDPFEAAFEEQEESPPNSPSAADDLEIQTNVAATADADALDLHDGDDEPKSAAAAA 60

Query: 61  THSVAP-ASTTSMFVSSSSHVSTAPKTKEDDEEEEEENVEVELAKFPSSGDPDKMAKMQA 120
           T+S  P ASTTS+FVSSSS+VS APKTKEDD+EEEEENVEVELAKFPSSGDPDKMAKMQA
Sbjct: 61  TNSGIPSASTTSLFVSSSSNVSAAPKTKEDDDEEEEENVEVELAKFPSSGDPDKMAKMQA 120

Query: 121 ILSQFTEEQMSRYESFRRAGFQKANMKRLLASISGTQKISVPMTIVVSGIAKMFVGELVE 180
           ILSQFTEEQMSRYESFRRAGFQKANMKRLLASISGTQKISVPMTIVVSGIAKMFVGELVE
Sbjct: 121 ILSQFTEEQMSRYESFRRAGFQKANMKRLLASISGTQKISVPMTIVVSGIAKMFVGELVE 180

Query: 181 TARVVMTERNDTGPIRPCHLREAYRRLKLEGKIPRKSVPRLFR 220
           TARVVMTERND+G IRPCHLREAYRRLKLEGKIPRKSVPRLFR
Sbjct: 181 TARVVMTERNDSGAIRPCHLREAYRRLKLEGKIPRKSVPRLFR 223

[Close]
BLAST of CsGy3G003360 vs. ExPASy TrEMBL
Match: A0A0A0L5S4 (TAFII28 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G038160 PE=3 SV=1)

HSP 1 Score: 407 bits (1045), Expect = 7.70e-143
Identity = 220/220 (100.00%), Postives = 220/220 (100.00%), Query Frame = 0 

Query: 1   MKQSKDPFEAAFEEQEESPPNSPSAADDLEIPTTVAPSPADAFDLQDGDDDPKSASVATH 60
           MKQSKDPFEAAFEEQEESPPNSPSAADDLEIPTTVAPSPADAFDLQDGDDDPKSASVATH
Sbjct: 1   MKQSKDPFEAAFEEQEESPPNSPSAADDLEIPTTVAPSPADAFDLQDGDDDPKSASVATH 60

Query: 61  SVAPASTTSMFVSSSSHVSTAPKTKEDDEEEEEENVEVELAKFPSSGDPDKMAKMQAILS 120
           SVAPASTTSMFVSSSSHVSTAPKTKEDDEEEEEENVEVELAKFPSSGDPDKMAKMQAILS
Sbjct: 61  SVAPASTTSMFVSSSSHVSTAPKTKEDDEEEEEENVEVELAKFPSSGDPDKMAKMQAILS 120

Query: 121 QFTEEQMSRYESFRRAGFQKANMKRLLASISGTQKISVPMTIVVSGIAKMFVGELVETAR 180
           QFTEEQMSRYESFRRAGFQKANMKRLLASISGTQKISVPMTIVVSGIAKMFVGELVETAR
Sbjct: 121 QFTEEQMSRYESFRRAGFQKANMKRLLASISGTQKISVPMTIVVSGIAKMFVGELVETAR 180

Query: 181 VVMTERNDTGPIRPCHLREAYRRLKLEGKIPRKSVPRLFR 220
           VVMTERNDTGPIRPCHLREAYRRLKLEGKIPRKSVPRLFR
Sbjct: 181 VVMTERNDTGPIRPCHLREAYRRLKLEGKIPRKSVPRLFR 220

[Close]
BLAST of CsGy3G003360 vs. ExPASy TrEMBL
Match: A0A5D3D798 (Transcription initiation factor TFIID subunit 11 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold443G001040 PE=3 SV=1)

HSP 1 Score: 398 bits (1022), Expect = 2.47e-139
Identity = 215/220 (97.73%), Postives = 216/220 (98.18%), Query Frame = 0 

Query: 1   MKQSKDPFEAAFEEQEESPPNSPSAADDLEIPTTVAPSPADAFDLQDGDDDPKSASVATH 60
           MKQSKDPFEAAFEEQEESPPNSPSAADDLEIPTTVAP PADAFDLQDGDDDPKSASVATH
Sbjct: 1   MKQSKDPFEAAFEEQEESPPNSPSAADDLEIPTTVAPVPADAFDLQDGDDDPKSASVATH 60

Query: 61  SVAPASTTSMFVSSSSHVSTAPKTKEDDEEEEEENVEVELAKFPSSGDPDKMAKMQAILS 120
           SV P STTSMFVSSSSHVS APKTKEDDEEEEEENVEVELAKFPSSGDPDKMAKMQAILS
Sbjct: 61  SVTPVSTTSMFVSSSSHVSAAPKTKEDDEEEEEENVEVELAKFPSSGDPDKMAKMQAILS 120

Query: 121 QFTEEQMSRYESFRRAGFQKANMKRLLASISGTQKISVPMTIVVSGIAKMFVGELVETAR 180
           QFTEEQMSRYESFRRAGFQKANMKRLLASISGTQKISVPMTIVVSGIAKMFVGELVETAR
Sbjct: 121 QFTEEQMSRYESFRRAGFQKANMKRLLASISGTQKISVPMTIVVSGIAKMFVGELVETAR 180

Query: 181 VVMTERNDTGPIRPCHLREAYRRLKLEGKIPRKSVPRLFR 220
           VVMTERND+GPIRPCHLREAYRRLKLEGKIPRKSVPRLFR
Sbjct: 181 VVMTERNDSGPIRPCHLREAYRRLKLEGKIPRKSVPRLFR 220

[Close]
BLAST of CsGy3G003360 vs. ExPASy TrEMBL
Match: A0A1S4DX73 (transcription initiation factor TFIID subunit 11 OS=Cucumis melo OX=3656 GN=LOC103490961 PE=3 SV=1)

HSP 1 Score: 396 bits (1018), Expect = 1.00e-138
Identity = 214/220 (97.27%), Postives = 215/220 (97.73%), Query Frame = 0 

Query: 1   MKQSKDPFEAAFEEQEESPPNSPSAADDLEIPTTVAPSPADAFDLQDGDDDPKSASVATH 60
           MKQSKDPFEAAFEEQEESPPNSPSAADDLEIPTTVAP PADAFDLQDGDDDPKSASVATH
Sbjct: 1   MKQSKDPFEAAFEEQEESPPNSPSAADDLEIPTTVAPVPADAFDLQDGDDDPKSASVATH 60

Query: 61  SVAPASTTSMFVSSSSHVSTAPKTKEDDEEEEEENVEVELAKFPSSGDPDKMAKMQAILS 120
           SV P STTSMFVSSSSHVS APKTKEDDEEEEEENVEVELAKFPSSGDPDKMAKMQAILS
Sbjct: 61  SVTPVSTTSMFVSSSSHVSAAPKTKEDDEEEEEENVEVELAKFPSSGDPDKMAKMQAILS 120

Query: 121 QFTEEQMSRYESFRRAGFQKANMKRLLASISGTQKISVPMTIVVSGIAKMFVGELVETAR 180
           QFTEEQMSRYESFRRAGFQKANMKRLLASISGTQKISVPMTIVVSGIAKMFVGELVETAR
Sbjct: 121 QFTEEQMSRYESFRRAGFQKANMKRLLASISGTQKISVPMTIVVSGIAKMFVGELVETAR 180

Query: 181 VVMTERNDTGPIRPCHLREAYRRLKLEGKIPRKSVPRLFR 220
           VVMTERND+GPIRPCHLRE YRRLKLEGKIPRKSVPRLFR
Sbjct: 181 VVMTERNDSGPIRPCHLREVYRRLKLEGKIPRKSVPRLFR 220

[Close]
BLAST of CsGy3G003360 vs. ExPASy TrEMBL
Match: A0A6J1FLN4 (transcription initiation factor TFIID subunit 11 OS=Cucurbita moschata OX=3662 GN=LOC111446328 PE=3 SV=1)

HSP 1 Score: 353 bits (906), Expect = 1.30e-121
Identity = 201/223 (90.13%), Postives = 209/223 (93.72%), Query Frame = 0 

Query: 1   MKQSKDPFEAAFEEQEESPPNSPSAADDLEIPTTVAPS-PADAFDLQDGDDDPKSASVA- 60
           MKQSKDPFEAAFEEQEESPPNSPSAADDLEI T VA +  ADA DL DGDD+PKSA+ A 
Sbjct: 1   MKQSKDPFEAAFEEQEESPPNSPSAADDLEIQTNVAATVDADALDLHDGDDEPKSAAAAA 60

Query: 61  THSVAP-ASTTSMFVSSSSHVSTAPKTKEDDEEEEEENVEVELAKFPSSGDPDKMAKMQA 120
           T+S  P ASTTS+FVSSSS+VS APKTKEDD+EEEEENVEVELAKFPSSGDPDKMAKMQA
Sbjct: 61  TNSGIPSASTTSLFVSSSSNVSAAPKTKEDDDEEEEENVEVELAKFPSSGDPDKMAKMQA 120

Query: 121 ILSQFTEEQMSRYESFRRAGFQKANMKRLLASISGTQKISVPMTIVVSGIAKMFVGELVE 180
           ILSQFTEEQMSRYESFRRAGFQKANMKRLLASISGTQKISVPMTIVVSGIAKMFVGELVE
Sbjct: 121 ILSQFTEEQMSRYESFRRAGFQKANMKRLLASISGTQKISVPMTIVVSGIAKMFVGELVE 180

Query: 181 TARVVMTERNDTGPIRPCHLREAYRRLKLEGKIPRKSVPRLFR 220
           TARVVMTERND+G IRPCHLREAYRRLKLEGKIPRKSVPRLFR
Sbjct: 181 TARVVMTERNDSGAIRPCHLREAYRRLKLEGKIPRKSVPRLFR 223

[Close]
BLAST of CsGy3G003360 vs. ExPASy TrEMBL
Match: A0A6J1KZI1 (transcription initiation factor TFIID subunit 11 OS=Cucurbita maxima OX=3661 GN=LOC111498496 PE=3 SV=1)

HSP 1 Score: 353 bits (906), Expect = 1.35e-121
Identity = 200/224 (89.29%), Postives = 209/224 (93.30%), Query Frame = 0 

Query: 1   MKQSKDPFEAAFEEQEESPPNSPSAADDLEIPTTVAPSP-ADAFDLQDGDDDPKSASVA- 60
           MKQSKDPFEAAFEEQEESPPNSPSAADDLEI T VA +  ADA DL DGDDDPK+A+ A 
Sbjct: 1   MKQSKDPFEAAFEEQEESPPNSPSAADDLEIQTNVAATADADAIDLHDGDDDPKTAAAAA 60

Query: 61  -THSVAP-ASTTSMFVSSSSHVSTAPKTKEDDEEEEEENVEVELAKFPSSGDPDKMAKMQ 120
            T+S  P ASTTS+FVSSSS++S APKTKEDD+EEEEENVEVELAKFPSSGDPDKMAKMQ
Sbjct: 61  ATNSGVPSASTTSLFVSSSSNISAAPKTKEDDDEEEEENVEVELAKFPSSGDPDKMAKMQ 120

Query: 121 AILSQFTEEQMSRYESFRRAGFQKANMKRLLASISGTQKISVPMTIVVSGIAKMFVGELV 180
           AILSQFTEEQMSRYESFRRAGFQKANMKRLLASISGTQKISVPMTIVVSGIAKMFVGELV
Sbjct: 121 AILSQFTEEQMSRYESFRRAGFQKANMKRLLASISGTQKISVPMTIVVSGIAKMFVGELV 180

Query: 181 ETARVVMTERNDTGPIRPCHLREAYRRLKLEGKIPRKSVPRLFR 220
           ETARVVMTERND+G IRPCHLREAYRRLKLEGKIPRKSVPRLFR
Sbjct: 181 ETARVVMTERNDSGAIRPCHLREAYRRLKLEGKIPRKSVPRLFR 224

[Close]
BLAST of CsGy3G003360 vs. TAIR 10
Match: AT4G20280.1 (TBP-associated factor 11 )

HSP 1 Score: 216.1 bits (549), Expect = 2.9e-56
Identity = 131/230 (56.96%), Postives = 160/230 (69.57%), Query Frame = 0 

Query: 1   MKQSKDPFEAAF-EEQEESPPNSP---------SAADDLEIPTTVAPSPADAFDLQDGDD 60
           MK SKDPFEAA  EEQEESPP SP         S    +EI  T           QD D+
Sbjct: 1   MKHSKDPFEAAIEEEQEESPPESPVGGGGGGDGSEDGRIEIDQT-----------QDEDE 60

Query: 61  DPKSASVATHSVAPASTTSMFVSSSSHVSTAPKTKEDDEEEEEENVEVELAKFPSSGDPD 120
            P    V        + TS+ V+ + +     K K++D+EEEEEN++VEL K+P+S DP 
Sbjct: 61  RP----VDVRRPMKKAKTSVVVTEAKN-----KDKDEDDEEEEENMDVELTKYPTSSDPA 120

Query: 121 KMAKMQAILSQFTEEQMSRYESFRRAGFQKANMKRLLASISGTQKISVPMTIVVSGIAKM 180
           KMAKMQ ILSQFTE+QMSRYESFRR+  Q+  MK+LL  ++G+QKI +PM IV  GIAKM
Sbjct: 121 KMAKMQTILSQFTEDQMSRYESFRRSALQRPQMKKLLIGVTGSQKIGMPMIIVACGIAKM 180

Query: 181 FVGELVETARVVMTERNDTGPIRPCHLREAYRRLKLEGKIPRKSVPRLFR 221
           FVGELVETARVVM ER ++GPIRPCH+RE+YRRLKLEGK+P++SVPRLFR
Sbjct: 181 FVGELVETARVVMAERKESGPIRPCHIRESYRRLKLEGKVPKRSVPRLFR 210

[Close]
BLAST of CsGy3G003360 vs. TAIR 10
Match: AT1G20000.1 (TBP-associated factor 11B )

HSP 1 Score: 161.0 bits (406), Expect = 1.1e-39
Identity = 107/221 (48.42%), Postives = 131/221 (59.28%), Query Frame = 0 

Query: 1   MKQSKDPFEAAFEEQEESPPNSPSAADDLEIPTTVAPSPADAFDLQDGDDDPKSASVATH 60
           MK SKDPFEAA EEQEESP         +E   T+           +GD+          
Sbjct: 32  MKHSKDPFEAAMEEQEESP---------VETEQTL-----------EGDE---------- 91

Query: 61  SVAPASTTSMFVSSSSHVSTAPKTKEDDEEEEEENVEVELAKFPSSGDPDKMA-KMQAIL 120
                                 K K     E +   EVE  K  +  DP   A KMQ IL
Sbjct: 92  ------------------RAVKKCKTSVVAEAKNKDEVEFTKNITGADPVTRANKMQKIL 151

Query: 121 SQFTEEQMSRYESFRRAGFQKANMKRLLASISGTQKISVPMTIVVSGIAKMFVGELVETA 180
           SQFTEEQMSRYESFRR+GF+K++M++L+  I+G  K+   M IVV GIAKMFVG+LVETA
Sbjct: 152 SQFTEEQMSRYESFRRSGFKKSDMEKLVQRITGGPKMDDTMNIVVRGIAKMFVGDLVETA 204

Query: 181 RVVMTERNDTGPIRPCHLREAYRRLKLEGKIPRKSVPRLFR 221
           RVVM ER ++GPIRPCH+RE+YRRLKL+GK+P++SV RLFR
Sbjct: 212 RVVMRERKESGPIRPCHIRESYRRLKLQGKVPQRSVQRLFR 204

The following BLAST results are available for this feature:
BLAST of CsGy3G003360 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q9M5654.0e-5556.96Transcription initiation factor TFIID subunit 11 OS=Arabidopsis thaliana OX=3702... [more]
F4HR031.5e-3848.42Transcription initiation factor TFIID subunit 11b OS=Arabidopsis thaliana OX=370... [more]
Q5U1X01.4e-1836.27Transcription initiation factor TFIID subunit 11 OS=Rattus norvegicus OX=10116 G... [more]
Q99JX11.8e-1836.76Transcription initiation factor TFIID subunit 11 OS=Mus musculus OX=10090 GN=Taf... [more]
Q5RA913.9e-1835.29Transcription initiation factor TFIID subunit 11 OS=Pongo abelii OX=9601 GN=TAF1... [more]
BLAST of CsGy3G003360 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_004147964.11.59e-142100.00transcription initiation factor TFIID subunit 11 [Cucumis sativus][more]
TYK19451.15.10e-13997.73transcription initiation factor TFIID subunit 11 [Cucumis melo var. makuwa][more]
XP_016900577.12.08e-13897.27PREDICTED: transcription initiation factor TFIID subunit 11 [Cucumis melo][more]
XP_038904708.11.50e-12993.69transcription initiation factor TFIID subunit 11 isoform X2 [Benincasa hispida][more]
KAG7028341.12.68e-12190.13Transcription initiation factor TFIID subunit 11 [Cucurbita argyrosperma subsp. ... [more]
BLAST of CsGy3G003360 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0L5S47.70e-143100.00TAFII28 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G038160 PE=... [more]
A0A5D3D7982.47e-13997.73Transcription initiation factor TFIID subunit 11 OS=Cucumis melo var. makuwa OX=... [more]
A0A1S4DX731.00e-13897.27transcription initiation factor TFIID subunit 11 OS=Cucumis melo OX=3656 GN=LOC1... [more]
A0A6J1FLN41.30e-12190.13transcription initiation factor TFIID subunit 11 OS=Cucurbita moschata OX=3662 G... [more]
A0A6J1KZI11.35e-12189.29transcription initiation factor TFIID subunit 11 OS=Cucurbita maxima OX=3661 GN=... [more]
BLAST of CsGy3G003360 vs. TAIR 10
Match NameE-valueIdentityDescription
AT4G20280.12.9e-5656.96TBP-associated factor 11 [more]
AT1G20000.11.1e-3948.42TBP-associated factor 11B [more]
InterPro
Analysis Name: InterPro Annotations of Cucumber (Gy14) v2.1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR009072Histone-foldGENE3D1.10.20.10Histone, subunit Acoord: 122..211
e-value: 3.9E-32
score: 112.2
IPR009072Histone-foldSUPERFAMILY47113Histone-foldcoord: 122..211
IPR006809TAFII28-like protein domainPFAMPF04719TAFII28coord: 118..203
e-value: 3.5E-32
score: 110.3
IPR006809TAFII28-like protein domainCDDcd08048TAF11coord: 122..205
e-value: 1.3213E-41
score: 134.231
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 59..80
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..111
NoneNo IPR availablePANTHERPTHR13218:SF19TAFII28-LIKE PROTEIN-RELATEDcoord: 1..220
IPR045127Transcription initiation factor TFIID subunit 11-likePANTHERPTHR13218TRANSCRIPTION INITIATION FACTOR TFIID SUBUNIT 11-RELATEDcoord: 1..220

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsGy3G003360.1CsGy3G003360.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0045893 positive regulation of transcription, DNA-templated
biological_process GO:0051123 RNA polymerase II preinitiation complex assembly
biological_process GO:0006413 translational initiation
biological_process GO:0006367 transcription initiation from RNA polymerase II promoter
cellular_component GO:0005669 transcription factor TFIID complex
cellular_component GO:0005634 nucleus
molecular_function GO:0046982 protein heterodimerization activity
molecular_function GO:0003713 transcription coactivator activity
molecular_function GO:0003743 translation initiation factor activity