CsGy2G023250 (gene) Cucumber (Gy14) v2.1

Overview
NameCsGy2G023250
Typegene
OrganismCucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
DescriptionRNA-dependent RNA polymerase
LocationGy14Chr2: 31303870 .. 31309538 (+)
RNA-Seq ExpressionCsGy2G023250
SyntenyCsGy2G023250
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CAACGATCTTCAAGACTATCCCATTAGAGTTCCAAAGAACCAAACCCACATCCCTAAAATTTAGGGTATTGTATTTAAAAAGATGCAAACCCAAATAACAAACGAAATAGTTACAAACGACCTCTTAGATTTCATTTTGGTATTGCAATTGGCCTGACTGTTCTAAAGAAAGAAAAATTTGGAAATACTGAAGCAGTTTGAAGAAAAATGTGGAAAGCCACCGGAAGTTGCCGCCCCGTCGAAAGATTTTCCGGTCGATTTCCTTTTCCTTTGTATTACGCTTTAGGGTTCCTTTTGCTAAGGGTCAATTCCGACATTTCATTGGCCAATTTGTTCAAAAAATTTGATCTTGAAAATTGTCCAATACTCTTTTTAATCCTCTTGTCATATTCCCAATAGTTTGTACAGTTGTAAGAAGTACAGAGACAAGAAACAAAGCAAAATCACGTAGTCATGGGCACGAAGACCGCTTTGCTCTCAGTCAATATTCCACCATAAATTATTACTTCACTCCTAAACCTTACTCAAGAAGCTATCCACCCATACCCATCAGCTTATATATTTAAAATCTTAATGTTCTCATTCTTCAGCAATCTGCAAAGATTTCTGATTCTTGGGAGTATCAGTTAGAGGAACCAAAATTCGCAAGTTATTGTTTCTTTGAGGTTAGTCGTTTCAATTTATCAAGAATGTCATTTCTTTTTCACTTTAAGAATTTGGGGTTTTTTGATATTGTTTGAAACTCTGTTTGGGAAAATGTGGGGTAAGGAATGGGTGAAACTGTTTGATGTTTATCATCTCATGGGTTTGGTAGATAAAAATTTACGTTTCTCCCTATTTAGCCTACTTCACAACCGCGGGGGGGCAGTTTTTGGAAATTTTGCCCTGTATGTATGACTTTACAAGAATCAGATAAGTTCAAAAGAATACAAGAAATCTGTTATGGGCAAATATTACTGAGAACTTGAGGATGAACTTCAACACTCAGTTTTCTGGAGTTGTTGATAGAACGGTTTTTTATTATTGTTTCATTATTTTATTTTACTTATGTATTCTGTGCTCATCAACTTAAGATTTTGTTTATAAAAGAAAACCTCTCAACTAATTTATTGAGTATTATGAGGAATTTAAATTGCCTTCTATTTTTCTCAGTCAGAGAAATAAATGGGGTCAGAAGAAGGTGAAAAGATAGTGGTAACTCAAGTCAGCTTTGGCGGATTTGACAGTGATGTTAAAGCTAGAGATCTTATGAGTTATCTGGAATCTGAGATTGGGCTTGTGGACAGATGTAGATTGAAAACTTCATGGACTCCTCCAGAATCGTACCCAGATTTTGAAGTCAGCAATGTTGCTAATGTTATAAAATCTGATGATTACAAGAAGGTGGTGCCTCATGCATTTGTACATTTTGTCTCACCTGACTCTGCTGCTGAGGCTCTACATGCTGCAGGTCGTGGTGAGCTTATTTTTAATGATAAATTGTTGAAGGCGAGTTTGGGGCCTGAGAGTCCTTTTCATATAAATCAGAGGCGAAGGACTAAGGTTCCCTTTAAGTTATCTGATGTGCAAGTTGATATAGGGAACTTAACTTGTCATGATGGGTTTTCAGTTGCTTGGAGAGGGCCTTCGAGTGGAATGGATTTTCTAGTGGATCCCTTTGATGGAACCTGTAAATTTTGTTTCACGAAGGATACTGCATTCTCTTTTAAAGATAACAACAAGCATACATTTTTGAAGTGTGATTACAAAATGGAGTTCATAGTGAGGGACATTAATCAGATCACAAGATATACGGATACTTCATGTTATGTTATTCTCTTGCAGCTTACATCATCACCCTGCATTTGGTATAGAACAGCAGATGATGATATTGCCAAATTAGTTCCATATGATTTGTTGGACGATGATGATCCATGGATCCGGACAACAGATTTCACGATTAGTGGAGCTATTGGTCGTTGTAATACTTTCAGAGTTTCAGTCCCACCCCGCTATGGCATCAAGCTGAATAATGCCATGAATTATTTAAAAGAACAAAGAGTGCACCAGGTCTCCCTCAACCGGCCTCCCAAGATCCTGAATGAACCAGATTATGGTGTGCAAATGACTGATCACTTCTTTTGCATCCTTTATAAAAAAGACATATCCTTTGAGATATTATTTCTGGTAAATGCCGTAATGCACAAAGGGATAATCAACCAGCACCAAATGTCTGATAGATTTTTTGATTTGCTAAGAAACCAGCCCAATGAAGTTAATTTGGCTGCTTTAAGTCATATTCATGCTTTTAGACGTCCTGTATTGGATGCCTGTAAGAAGCTAAAACTTGTACAAGAATGGTTGTTGAAGAACCCTACACTTTTGAAAAGATCTAAAGAGCTGGTAGATATTGTTGAAATCAGGAGACTAGTAATAACTCCTTCAAAAGCATATTGCTTTCCACCTGAAGTTGAACTGTCCAATAGGGTTTTGAGAAGATACAAGGATGTTGCCGATAGGTTCCTCAGGGTTACCTTCATGGATGAAGGCATGAAGAAAATCAATTCACACGTTTATACCTATTATGTTGCCCCTATAGTAAAGGAAATTACTTCAAGCTCCTTTCCCCAGAAGACTAAAATATTTGCAAGGATGAAACATATTCTGAAACATGGATTTCACTTGTGTGGTAGGAAATACTCCTTTTTGGCGTATTCATCCAACCAACTGAGGGACCAATCAGCTTGGTTTTTTGCTGAATGCAAAAGTATAAGTGTTGATGCTATTTTGGGTTGGATGGGAAAATTTACCAATAAAAATGTTGCAAAGTGTGCTGCTAGAATTGGTCAGTGCTTTTCATCTACTTATGCAACAATTGAAGTTCCAAGAAACATGGTCAATCATGATCTTTCTGATGTTGAGAGGAATGGATATGTTTTCTCTGATGGGATTGGAACCATTACTCCTGATCTTGCGCAGGAAGTTGCAGACAAACTAAAAATGGATGGGAGCCCGCCCTGCGCTTACCAAATTAGATATGCAGGTTACAAAGGTGTTGTTGCCACTTGGCCATCCAAGAAGGACGGAATCAGACTTGCTTTAAGGCCAAGCATGAATAAATTTGAATCAAATCATAGAATCTTGGAGATCTGTTCATGGACTAGATTTCAGCCAGGTTTTCTTAATAGGCAGATTATAACCCTCCTTTCTACACTAAGTGTCCCTGATGAAATTTTCTGGAGTATGCAGGAGACTATGATTTCAAAACTGGATAGAATGATCACCGATACAGATGTGGCGTTTGAAGTTCTCACTGCATCCTGTGCCGAGCAAGGAAATGCAGCGGCAATTATGTTGAGTGCTGGTTTTGAACCTCGAACCGAACCTCATCTAAGGGGCATGCTAATGTGTATAAGAGCAGCACAGCTGTGGGGCCTTCGGGAAAAAGCAAGGATTTTTGTTACTGAGGGGAGGTGGTGTATGGGGTGTTTCGACGAGAGCGGCGTGTTACAAGAAGGTCAATGCTTCATCCAAGTATCCACTCCATTGCTTGAGAAGTGTTTCTCCAAGCATGGGTCTCTCTTTGCTGAGACAAAGAACAATCTTACTGTAGTAAGAGGGACTGTAGTCATAGCCAAAAATCCGTGCCTTCATCCAGGAGATGTGAGAATTCTTGAAGCAGTTGATGCTCCCGAGTTGCATCATTTGTACGATTGCCTCGTGTTTCCTCGAAATGGTGAACGGCCCCATACCAATGAAGCTTCTGGAAGTGATTTGGATGGGGATCTCTACTTCACTACTTGGGATGGAAATCTTATTCCACCTAGTAAAAAAAGTTGGCCACCTATGGAGTATGCTCCAGCGGAAGTAAAGACTCTTCAACGTAAAATTACTCGATGGGTATTGTCCTCCAATTCAACTTTTTTTACCCTATGGTTGTTCTTCATTACCTGCATGCATTATTCTTTAATTCTTCCTGGACTCTTAAATAACTTCTTTACATGAACTAGAATGCCTACTCTGTTTCTTTTATTATTTATTGATATTCTTTTTTCTTCATTATTTCTTCGTATTTATCTTATCTTATCATTTTATTGTATTTATCTTATCATTTTATAGGATATAATGGAGTTCTTTGCGAAAAATATGATCAATGAGAGTCTGGGGACGATATGCAATGCGCATGTTGTTCATGCTGACCGCAGCAAGCATGGAGCTTTGGATGAGAACTGTATACAATTATCTGAATTAGCTGCCACAGCTGTTGATTTCCCCAAGACAGGGAAGCTCGTGACCATGCCTCCCCATTTAAAACCAAAACTATATCCAGATTTTATGGGAAAGGAAGCTACTCAATCATACAAGTCCACCAAAATTCTAGGAAAAATGTACCGCCGAATTAGAGATGCATATGATGATGATGATATGATCACATCACGTGAGCTAAATTTTACTCCTGGCGATGTCCATTACGATGTAGACCTCGAAGTGGCAGGAGCAGAAGATTTCATTGCAGAAGCATGGGATCAAAAATGCTCATACGATGGTCAGCTGAGCGGTTTACTGGGACAATATAAAGTTAATAGGGAAGAAGAGATTGTCACTGGACATATTTGGTCCATGCCAAAGTATGTTAGTAGGAAGCAAGGAGAGCTGAAGGAGAAGCTTAAACATTCTTATAGCACTCTTAAGAAAGACTTCAGGCAAGTTTTTGAGAATCTTGGGCCAGAGTTTGAGCAACTCACTTGTGATGAAAGGAATGCACTGTATGAAAAAAAGGCATCTGCCTGGTATCAGGTGGCATACCATCCAACTTGGTTGAAGAAATCATTGGAGCTGCGAGAACCCGACGCTCCTGAGGCCGTCCCGATGTTAAGCTTTCCTTGGATTGCTGCCGATTATCTTGCACGAATCAAAATCAAATGCAGGCGGACGAAAAGTTTTGACCCAACAAAGCCGATTAACTCTTTGGCAAGTTATCTCTCTGATCGAATGTGAACATCCGAATGGCTCTCGCACTTTTGTAGCTGATTTAGATAATCTGGTTGCAAGACCACTCTGCCAGTATAGAACATGATTGTTATGTAAACTTGTTGTAGCTTGTAATGTAGCAGTAGCAGTATCGGGTTGGATTGTACTATAAATTTCGAGGTGTTCCTTGAAACAATATTGTCATTTATATTTCTGAAGATTCAAAATGTTTGTATTAAAGGGGTAAACTATTTTTTCCTTTTTTTTTCTTTCCTAACGTTTTTGAACTTTTCTTTGCCAAAAAAATAAATGCAACCTATAATTCACTCAAGTATTGCTCTTTATTTGCGATCAACATGTACAAACTAGCTGCAATTTTATAGGATTTAATCTAGAGTATGACAAGCCAATGTGTGTCAAGAAGCAAATGTTTGTTAGTTTTGAAATGAGTGATCTGTTGAGATCCTAACTCTCATTATGCTCATCATCGCACCATCAAAGGCTATAATTTTCGTTTAGCATACTAACAAATTTCTTCGTTAAACTTTTTTGAAACAATCGTCAAAAGTTGTTGTGAAATATATATATTGAATTTACACGGTGGAAACGAAAGGTTTTCTGTTAAAACGAGAGAAAAAGAAAAAGAAAAGATGTTTGAAAATTGCAGAAAAGGGAGGGAAATAGAGTTGGAGTAGCAATGGCGGCAAAAGCTATGGGAG

mRNA sequence

CAACGATCTTCAAGACTATCCCATTAGAGTTCCAAAGAACCAAACCCACATCCCTAAAATTTAGGGTATTGTATTTAAAAAGATGCAAACCCAAATAACAAACGAAATAGTTACAAACGACCTCTTAGATTTCATTTTGGTATTGCAATTGGCCTGACTGTTCTAAAGAAAGAAAAATTTGGAAATACTGAAGCAGTTTGAAGAAAAATGTGGAAAGCCACCGGAAGTTGCCGCCCCGTCGAAAGATTTTCCGGTCGATTTCCTTTTCCTTTGTATTACGCTTTAGGGTTCCTTTTGCTAAGGGTCAATTCCGACATTTCATTGGCCAATTTGTTCAAAAAATTTGATCTTGAAAATTGTCCAATACTCTTTTTAATCCTCTTGTCATATTCCCAATAGTTTGTACAGTTGTAAGAAGTACAGAGACAAGAAACAAAGCAAAATCACGTAGTCATGGGCACGAAGACCGCTTTGCTCTCAGTCAATATTCCACCATAAATTATTACTTCACTCCTAAACCTTACTCAAGAAGCTATCCACCCATACCCATCAGCTTATATATTTAAAATCTTAATGTTCTCATTCTTCAGCAATCTGCAAAGATTTCTGATTCTTGGGAGTATCAGTTAGAGGAACCAAAATTCGCAAGTTATTGTTTCTTTGAGTCAGAGAAATAAATGGGGTCAGAAGAAGGTGAAAAGATAGTGGTAACTCAAGTCAGCTTTGGCGGATTTGACAGTGATGTTAAAGCTAGAGATCTTATGAGTTATCTGGAATCTGAGATTGGGCTTGTGGACAGATGTAGATTGAAAACTTCATGGACTCCTCCAGAATCGTACCCAGATTTTGAAGTCAGCAATGTTGCTAATGTTATAAAATCTGATGATTACAAGAAGGTGGTGCCTCATGCATTTGTACATTTTGTCTCACCTGACTCTGCTGCTGAGGCTCTACATGCTGCAGGTCGTGGTGAGCTTATTTTTAATGATAAATTGTTGAAGGCGAGTTTGGGGCCTGAGAGTCCTTTTCATATAAATCAGAGGCGAAGGACTAAGGTTCCCTTTAAGTTATCTGATGTGCAAGTTGATATAGGGAACTTAACTTGTCATGATGGGTTTTCAGTTGCTTGGAGAGGGCCTTCGAGTGGAATGGATTTTCTAGTGGATCCCTTTGATGGAACCTGTAAATTTTGTTTCACGAAGGATACTGCATTCTCTTTTAAAGATAACAACAAGCATACATTTTTGAAGTGTGATTACAAAATGGAGTTCATAGTGAGGGACATTAATCAGATCACAAGATATACGGATACTTCATGTTATGTTATTCTCTTGCAGCTTACATCATCACCCTGCATTTGGTATAGAACAGCAGATGATGATATTGCCAAATTAGTTCCATATGATTTGTTGGACGATGATGATCCATGGATCCGGACAACAGATTTCACGATTAGTGGAGCTATTGGTCGTTGTAATACTTTCAGAGTTTCAGTCCCACCCCGCTATGGCATCAAGCTGAATAATGCCATGAATTATTTAAAAGAACAAAGAGTGCACCAGGTCTCCCTCAACCGGCCTCCCAAGATCCTGAATGAACCAGATTATGGTGTGCAAATGACTGATCACTTCTTTTGCATCCTTTATAAAAAAGACATATCCTTTGAGATATTATTTCTGGTAAATGCCGTAATGCACAAAGGGATAATCAACCAGCACCAAATGTCTGATAGATTTTTTGATTTGCTAAGAAACCAGCCCAATGAAGTTAATTTGGCTGCTTTAAGTCATATTCATGCTTTTAGACGTCCTGTATTGGATGCCTGTAAGAAGCTAAAACTTGTACAAGAATGGTTGTTGAAGAACCCTACACTTTTGAAAAGATCTAAAGAGCTGGTAGATATTGTTGAAATCAGGAGACTAGTAATAACTCCTTCAAAAGCATATTGCTTTCCACCTGAAGTTGAACTGTCCAATAGGGTTTTGAGAAGATACAAGGATGTTGCCGATAGGTTCCTCAGGGTTACCTTCATGGATGAAGGCATGAAGAAAATCAATTCACACGTTTATACCTATTATGTTGCCCCTATAGTAAAGGAAATTACTTCAAGCTCCTTTCCCCAGAAGACTAAAATATTTGCAAGGATGAAACATATTCTGAAACATGGATTTCACTTGTGTGGTAGGAAATACTCCTTTTTGGCGTATTCATCCAACCAACTGAGGGACCAATCAGCTTGGTTTTTTGCTGAATGCAAAAGTATAAGTGTTGATGCTATTTTGGGTTGGATGGGAAAATTTACCAATAAAAATGTTGCAAAGTGTGCTGCTAGAATTGGTCAGTGCTTTTCATCTACTTATGCAACAATTGAAGTTCCAAGAAACATGGTCAATCATGATCTTTCTGATGTTGAGAGGAATGGATATGTTTTCTCTGATGGGATTGGAACCATTACTCCTGATCTTGCGCAGGAAGTTGCAGACAAACTAAAAATGGATGGGAGCCCGCCCTGCGCTTACCAAATTAGATATGCAGGTTACAAAGGTGTTGTTGCCACTTGGCCATCCAAGAAGGACGGAATCAGACTTGCTTTAAGGCCAAGCATGAATAAATTTGAATCAAATCATAGAATCTTGGAGATCTGTTCATGGACTAGATTTCAGCCAGGTTTTCTTAATAGGCAGATTATAACCCTCCTTTCTACACTAAGTGTCCCTGATGAAATTTTCTGGAGTATGCAGGAGACTATGATTTCAAAACTGGATAGAATGATCACCGATACAGATGTGGCGTTTGAAGTTCTCACTGCATCCTGTGCCGAGCAAGGAAATGCAGCGGCAATTATGTTGAGTGCTGGTTTTGAACCTCGAACCGAACCTCATCTAAGGGGCATGCTAATGTGTATAAGAGCAGCACAGCTGTGGGGCCTTCGGGAAAAAGCAAGGATTTTTGTTACTGAGGGGAGGTGGTGTATGGGGTGTTTCGACGAGAGCGGCGTGTTACAAGAAGGTCAATGCTTCATCCAAGTATCCACTCCATTGCTTGAGAAGTGTTTCTCCAAGCATGGGTCTCTCTTTGCTGAGACAAAGAACAATCTTACTGTAGTAAGAGGGACTGTAGTCATAGCCAAAAATCCGTGCCTTCATCCAGGAGATGTGAGAATTCTTGAAGCAGTTGATGCTCCCGAGTTGCATCATTTGTACGATTGCCTCGTGTTTCCTCGAAATGGTGAACGGCCCCATACCAATGAAGCTTCTGGAAGTGATTTGGATGGGGATCTCTACTTCACTACTTGGGATGGAAATCTTATTCCACCTAGTAAAAAAAGTTGGCCACCTATGGAGTATGCTCCAGCGGAAGTAAAGACTCTTCAACGTAAAATTACTCGATGGGATATAATGGAGTTCTTTGCGAAAAATATGATCAATGAGAGTCTGGGGACGATATGCAATGCGCATGTTGTTCATGCTGACCGCAGCAAGCATGGAGCTTTGGATGAGAACTGTATACAATTATCTGAATTAGCTGCCACAGCTGTTGATTTCCCCAAGACAGGGAAGCTCGTGACCATGCCTCCCCATTTAAAACCAAAACTATATCCAGATTTTATGGGAAAGGAAGCTACTCAATCATACAAGTCCACCAAAATTCTAGGAAAAATGTACCGCCGAATTAGAGATGCATATGATGATGATGATATGATCACATCACGTGAGCTAAATTTTACTCCTGGCGATGTCCATTACGATGTAGACCTCGAAGTGGCAGGAGCAGAAGATTTCATTGCAGAAGCATGGGATCAAAAATGCTCATACGATGGTCAGCTGAGCGGTTTACTGGGACAATATAAAGTTAATAGGGAAGAAGAGATTGTCACTGGACATATTTGGTCCATGCCAAAGTATGTTAGTAGGAAGCAAGGAGAGCTGAAGGAGAAGCTTAAACATTCTTATAGCACTCTTAAGAAAGACTTCAGGCAAGTTTTTGAGAATCTTGGGCCAGAGTTTGAGCAACTCACTTGTGATGAAAGGAATGCACTGTATGAAAAAAAGGCATCTGCCTGGTATCAGGTGGCATACCATCCAACTTGGTTGAAGAAATCATTGGAGCTGCGAGAACCCGACGCTCCTGAGGCCGTCCCGATGTTAAGCTTTCCTTGGATTGCTGCCGATTATCTTGCACGAATCAAAATCAAATGCAGGCGGACGAAAAGTTTTGACCCAACAAAGCCGATTAACTCTTTGGCAAGTTATCTCTCTGATCGAATGTGAACATCCGAATGGCTCTCGCACTTTTGTAGCTGATTTAGATAATCTGGTTGCAAGACCACTCTGCCAGTATAGAACATGATTGTTATGTAAACTTGTTGTAGCTTGTAATGTAGCAGTAGCAGTATCGGGTTGGATTGTACTATAAATTTCGAGGTGTTCCTTGAAACAATATTGTCATTTATATTTCTGAAGATTCAAAATGTTTGTATTAAAGGGGTAAACTATTTTTTCCTTTTTTTTTCTTTCCTAACGTTTTTGAACTTTTCTTTGCCAAAAAAATAAATGCAACCTATAATTCACTCAAGTATTGCTCTTTATTTGCGATCAACATGTACAAACTAGCTGCAATTTTATAGGATTTAATCTAGAGTATGACAAGCCAATGTGTGTCAAGAAGCAAATGTTTGTTAGTTTTGAAATGAGTGATCTGTTGAGATCCTAACTCTCATTATGCTCATCATCGCACCATCAAAGGCTATAATTTTCGTTTAGCATACTAACAAATTTCTTCGTTAAACTTTTTTGAAACAATCGTCAAAAGTTGTTGTGAAATATATATATTGAATTTACACGGTGGAAACGAAAGGTTTTCTGTTAAAACGAGAGAAAAAGAAAAAGAAAAGATGTTTGAAAATTGCAGAAAAGGGAGGGAAATAGAGTTGGAGTAGCAATGGCGGCAAAAGCTATGGGAG

Coding sequence (CDS)

ATGGGGTCAGAAGAAGGTGAAAAGATAGTGGTAACTCAAGTCAGCTTTGGCGGATTTGACAGTGATGTTAAAGCTAGAGATCTTATGAGTTATCTGGAATCTGAGATTGGGCTTGTGGACAGATGTAGATTGAAAACTTCATGGACTCCTCCAGAATCGTACCCAGATTTTGAAGTCAGCAATGTTGCTAATGTTATAAAATCTGATGATTACAAGAAGGTGGTGCCTCATGCATTTGTACATTTTGTCTCACCTGACTCTGCTGCTGAGGCTCTACATGCTGCAGGTCGTGGTGAGCTTATTTTTAATGATAAATTGTTGAAGGCGAGTTTGGGGCCTGAGAGTCCTTTTCATATAAATCAGAGGCGAAGGACTAAGGTTCCCTTTAAGTTATCTGATGTGCAAGTTGATATAGGGAACTTAACTTGTCATGATGGGTTTTCAGTTGCTTGGAGAGGGCCTTCGAGTGGAATGGATTTTCTAGTGGATCCCTTTGATGGAACCTGTAAATTTTGTTTCACGAAGGATACTGCATTCTCTTTTAAAGATAACAACAAGCATACATTTTTGAAGTGTGATTACAAAATGGAGTTCATAGTGAGGGACATTAATCAGATCACAAGATATACGGATACTTCATGTTATGTTATTCTCTTGCAGCTTACATCATCACCCTGCATTTGGTATAGAACAGCAGATGATGATATTGCCAAATTAGTTCCATATGATTTGTTGGACGATGATGATCCATGGATCCGGACAACAGATTTCACGATTAGTGGAGCTATTGGTCGTTGTAATACTTTCAGAGTTTCAGTCCCACCCCGCTATGGCATCAAGCTGAATAATGCCATGAATTATTTAAAAGAACAAAGAGTGCACCAGGTCTCCCTCAACCGGCCTCCCAAGATCCTGAATGAACCAGATTATGGTGTGCAAATGACTGATCACTTCTTTTGCATCCTTTATAAAAAAGACATATCCTTTGAGATATTATTTCTGGTAAATGCCGTAATGCACAAAGGGATAATCAACCAGCACCAAATGTCTGATAGATTTTTTGATTTGCTAAGAAACCAGCCCAATGAAGTTAATTTGGCTGCTTTAAGTCATATTCATGCTTTTAGACGTCCTGTATTGGATGCCTGTAAGAAGCTAAAACTTGTACAAGAATGGTTGTTGAAGAACCCTACACTTTTGAAAAGATCTAAAGAGCTGGTAGATATTGTTGAAATCAGGAGACTAGTAATAACTCCTTCAAAAGCATATTGCTTTCCACCTGAAGTTGAACTGTCCAATAGGGTTTTGAGAAGATACAAGGATGTTGCCGATAGGTTCCTCAGGGTTACCTTCATGGATGAAGGCATGAAGAAAATCAATTCACACGTTTATACCTATTATGTTGCCCCTATAGTAAAGGAAATTACTTCAAGCTCCTTTCCCCAGAAGACTAAAATATTTGCAAGGATGAAACATATTCTGAAACATGGATTTCACTTGTGTGGTAGGAAATACTCCTTTTTGGCGTATTCATCCAACCAACTGAGGGACCAATCAGCTTGGTTTTTTGCTGAATGCAAAAGTATAAGTGTTGATGCTATTTTGGGTTGGATGGGAAAATTTACCAATAAAAATGTTGCAAAGTGTGCTGCTAGAATTGGTCAGTGCTTTTCATCTACTTATGCAACAATTGAAGTTCCAAGAAACATGGTCAATCATGATCTTTCTGATGTTGAGAGGAATGGATATGTTTTCTCTGATGGGATTGGAACCATTACTCCTGATCTTGCGCAGGAAGTTGCAGACAAACTAAAAATGGATGGGAGCCCGCCCTGCGCTTACCAAATTAGATATGCAGGTTACAAAGGTGTTGTTGCCACTTGGCCATCCAAGAAGGACGGAATCAGACTTGCTTTAAGGCCAAGCATGAATAAATTTGAATCAAATCATAGAATCTTGGAGATCTGTTCATGGACTAGATTTCAGCCAGGTTTTCTTAATAGGCAGATTATAACCCTCCTTTCTACACTAAGTGTCCCTGATGAAATTTTCTGGAGTATGCAGGAGACTATGATTTCAAAACTGGATAGAATGATCACCGATACAGATGTGGCGTTTGAAGTTCTCACTGCATCCTGTGCCGAGCAAGGAAATGCAGCGGCAATTATGTTGAGTGCTGGTTTTGAACCTCGAACCGAACCTCATCTAAGGGGCATGCTAATGTGTATAAGAGCAGCACAGCTGTGGGGCCTTCGGGAAAAAGCAAGGATTTTTGTTACTGAGGGGAGGTGGTGTATGGGGTGTTTCGACGAGAGCGGCGTGTTACAAGAAGGTCAATGCTTCATCCAAGTATCCACTCCATTGCTTGAGAAGTGTTTCTCCAAGCATGGGTCTCTCTTTGCTGAGACAAAGAACAATCTTACTGTAGTAAGAGGGACTGTAGTCATAGCCAAAAATCCGTGCCTTCATCCAGGAGATGTGAGAATTCTTGAAGCAGTTGATGCTCCCGAGTTGCATCATTTGTACGATTGCCTCGTGTTTCCTCGAAATGGTGAACGGCCCCATACCAATGAAGCTTCTGGAAGTGATTTGGATGGGGATCTCTACTTCACTACTTGGGATGGAAATCTTATTCCACCTAGTAAAAAAAGTTGGCCACCTATGGAGTATGCTCCAGCGGAAGTAAAGACTCTTCAACGTAAAATTACTCGATGGGATATAATGGAGTTCTTTGCGAAAAATATGATCAATGAGAGTCTGGGGACGATATGCAATGCGCATGTTGTTCATGCTGACCGCAGCAAGCATGGAGCTTTGGATGAGAACTGTATACAATTATCTGAATTAGCTGCCACAGCTGTTGATTTCCCCAAGACAGGGAAGCTCGTGACCATGCCTCCCCATTTAAAACCAAAACTATATCCAGATTTTATGGGAAAGGAAGCTACTCAATCATACAAGTCCACCAAAATTCTAGGAAAAATGTACCGCCGAATTAGAGATGCATATGATGATGATGATATGATCACATCACGTGAGCTAAATTTTACTCCTGGCGATGTCCATTACGATGTAGACCTCGAAGTGGCAGGAGCAGAAGATTTCATTGCAGAAGCATGGGATCAAAAATGCTCATACGATGGTCAGCTGAGCGGTTTACTGGGACAATATAAAGTTAATAGGGAAGAAGAGATTGTCACTGGACATATTTGGTCCATGCCAAAGTATGTTAGTAGGAAGCAAGGAGAGCTGAAGGAGAAGCTTAAACATTCTTATAGCACTCTTAAGAAAGACTTCAGGCAAGTTTTTGAGAATCTTGGGCCAGAGTTTGAGCAACTCACTTGTGATGAAAGGAATGCACTGTATGAAAAAAAGGCATCTGCCTGGTATCAGGTGGCATACCATCCAACTTGGTTGAAGAAATCATTGGAGCTGCGAGAACCCGACGCTCCTGAGGCCGTCCCGATGTTAAGCTTTCCTTGGATTGCTGCCGATTATCTTGCACGAATCAAAATCAAATGCAGGCGGACGAAAAGTTTTGACCCAACAAAGCCGATTAACTCTTTGGCAAGTTATCTCTCTGATCGAATGTGA

Protein sequence

MGSEEGEKIVVTQVSFGGFDSDVKARDLMSYLESEIGLVDRCRLKTSWTPPESYPDFEVSNVANVIKSDDYKKVVPHAFVHFVSPDSAAEALHAAGRGELIFNDKLLKASLGPESPFHINQRRRTKVPFKLSDVQVDIGNLTCHDGFSVAWRGPSSGMDFLVDPFDGTCKFCFTKDTAFSFKDNNKHTFLKCDYKMEFIVRDINQITRYTDTSCYVILLQLTSSPCIWYRTADDDIAKLVPYDLLDDDDPWIRTTDFTISGAIGRCNTFRVSVPPRYGIKLNNAMNYLKEQRVHQVSLNRPPKILNEPDYGVQMTDHFFCILYKKDISFEILFLVNAVMHKGIINQHQMSDRFFDLLRNQPNEVNLAALSHIHAFRRPVLDACKKLKLVQEWLLKNPTLLKRSKELVDIVEIRRLVITPSKAYCFPPEVELSNRVLRRYKDVADRFLRVTFMDEGMKKINSHVYTYYVAPIVKEITSSSFPQKTKIFARMKHILKHGFHLCGRKYSFLAYSSNQLRDQSAWFFAECKSISVDAILGWMGKFTNKNVAKCAARIGQCFSSTYATIEVPRNMVNHDLSDVERNGYVFSDGIGTITPDLAQEVADKLKMDGSPPCAYQIRYAGYKGVVATWPSKKDGIRLALRPSMNKFESNHRILEICSWTRFQPGFLNRQIITLLSTLSVPDEIFWSMQETMISKLDRMITDTDVAFEVLTASCAEQGNAAAIMLSAGFEPRTEPHLRGMLMCIRAAQLWGLREKARIFVTEGRWCMGCFDESGVLQEGQCFIQVSTPLLEKCFSKHGSLFAETKNNLTVVRGTVVIAKNPCLHPGDVRILEAVDAPELHHLYDCLVFPRNGERPHTNEASGSDLDGDLYFTTWDGNLIPPSKKSWPPMEYAPAEVKTLQRKITRWDIMEFFAKNMINESLGTICNAHVVHADRSKHGALDENCIQLSELAATAVDFPKTGKLVTMPPHLKPKLYPDFMGKEATQSYKSTKILGKMYRRIRDAYDDDDMITSRELNFTPGDVHYDVDLEVAGAEDFIAEAWDQKCSYDGQLSGLLGQYKVNREEEIVTGHIWSMPKYVSRKQGELKEKLKHSYSTLKKDFRQVFENLGPEFEQLTCDERNALYEKKASAWYQVAYHPTWLKKSLELREPDAPEAVPMLSFPWIAADYLARIKIKCRRTKSFDPTKPINSLASYLSDRM*
Homology
[Close]
BLAST of CsGy2G023250 vs. ExPASy Swiss-Prot
Match: Q9SG02 (RNA-dependent RNA polymerase 6 OS=Arabidopsis thaliana OX=3702 GN=RDR6 PE=1 SV=1)

HSP 1 Score: 1659.8 bits (4297), Expect = 0.0e+00
Identity = 792/1199 (66.06%), Postives = 956/1199 (79.73%), Query Frame = 0 

Query: 1    MGSEEG-EKIVVTQVSFGGFDSDVKARDLMSYLESEIGLVDRCRLKTSWTPPESYPDFEV 60
            MGSE   +K VVTQVS GGF     A+ L  YLE E+G+V RCRLKTSWTPP SYP+FE+
Sbjct: 1    MGSEGNMKKSVVTQVSIGGFGESTTAKQLTDYLEDEVGIVWRCRLKTSWTPPGSYPNFEI 60

Query: 61   SNVANVIKSDDYKKVVPHAFVHFVSPDSAAEALHAAGRGELIFNDKLLKASLGPESPFHI 120
            ++ +N+   D+YKKV PHAFVHF   +SA  A+ AAG+  LI + + LK SLGP++P+ +
Sbjct: 61   ADTSNIPSIDEYKKVEPHAFVHFAVFESAGRAMDAAGQCNLILDGQPLKVSLGPKNPYSL 120

Query: 121  NQRRRTKVPFKLSDVQVDIGNLTCHDGFSVAWRGPSSGMDFLVDPFDGTCKFCFTKDTAF 180
            NQRRRT VP+KL+ + ++IG L   D F V+WR  + G+DFLVDPFD TCKFCF K TAF
Sbjct: 121  NQRRRTTVPYKLAGITLEIGTLVSRDDFFVSWR--AEGVDFLVDPFDNTCKFCFRKSTAF 180

Query: 181  SFKDNNKHTFLKCDYKMEFIVRDINQITRYTDTSCYVILLQLTSSPCIWYRTADDDIAKL 240
            SFKD   H  + CDYK+E +VRDI  + +Y     +V++LQL SSP +WYRTADDDI   
Sbjct: 181  SFKDAVMHAVINCDYKLELLVRDIQTVRQYKTLHGFVLILQLASSPRVWYRTADDDIYDT 240

Query: 241  VPYDLLDDDDPWIRTTDFTISGAIGRCNTFRVSVPPRYGIKLNNAMNYLKEQRVHQVSLN 300
            VP DLLDDDDPWIRTTDFT  GAIGRC+++RV + PRY  KL  A++Y + +RV +  + 
Sbjct: 241  VPGDLLDDDDPWIRTTDFTQVGAIGRCHSYRVLISPRYENKLRTALDYFRMRRVQEERVR 300

Query: 301  RPPKILNEPDYGVQMTDHFFCILYKKDISFEILFLVNAVMHKGIINQHQMSDRFFDLLRN 360
             PP+I NEP +G  ++DHFFCI +K+ ISFEI+FLVN+V+H+G+ NQ Q+++RFFDLLRN
Sbjct: 301  WPPRIRNEPCFGEPVSDHFFCIHHKEGISFEIMFLVNSVLHRGVFNQFQLTERFFDLLRN 360

Query: 361  QPNEVNLAALSHIHAFRRPVLDACKKLKLVQEWLLKNPTLLKRSKELVDIVEIRRLVITP 420
            QP +VN+A+L H+  ++RPV DA K+LKLVQEW+ KNP LL   ++  DI EIRRLVITP
Sbjct: 361  QPKDVNIASLKHLCTYKRPVFDAYKRLKLVQEWIQKNPKLLGSHEQSEDISEIRRLVITP 420

Query: 421  SKAYCFPPEVELSNRVLRRYKDVADRFLRVTFMDEGMKKINSHVYTYYVAPIVKEITSSS 480
            ++AYC PPEVELSNRVLRRYK VA+RFLRVTFMDE M+ INS+V +Y+VAPIVK++TSSS
Sbjct: 421  TRAYCLPPEVELSNRVLRRYKAVAERFLRVTFMDESMQTINSNVLSYFVAPIVKDLTSSS 480

Query: 481  FPQKTKIFARMKHILKHGFHLCGRKYSFLAYSSNQLRDQSAWFFAECKSISVDAILGWMG 540
            F QKT +F R+K IL  GF LCGRKYSFLA+S+NQLRD+SAWFFAE     V  I  WMG
Sbjct: 481  FSQKTYVFKRVKSILTDGFKLCGRKYSFLAFSANQLRDRSAWFFAEDGKTRVSDIKTWMG 540

Query: 541  KFTNKNVAKCAARIGQCFSSTYATIEVPRNMVNHDLSDVERNGYVFSDGIGTITPDLAQE 600
            KF +KNVAKCAAR+G CFSSTYAT++V  + V+ ++ D+ERNGYVFSDGIGTITPDLA E
Sbjct: 541  KFKDKNVAKCAARMGLCFSSTYATVDVMPHEVDTEVPDIERNGYVFSDGIGTITPDLADE 600

Query: 601  VADKLKMD-GSPPCAYQIRYAGYKGVVATWPSKKDGIRLALRPSMNKFESNHRILEICSW 660
            V +KLK+D    PCAYQIRYAG+KGVVA WPSK DGIRLALR SM KF S H ILEICSW
Sbjct: 601  VMEKLKLDVHYSPCAYQIRYAGFKGVVARWPSKSDGIRLALRDSMKKFFSKHTILEICSW 660

Query: 661  TRFQPGFLNRQIITLLSTLSVPDEIFWSMQETMISKLDRMITDTDVAFEVLTASCAEQGN 720
            TRFQPGFLNRQIITLLS L VPDEIFW MQE+M+ KL+R++ DTDVAFEVLTASCAEQGN
Sbjct: 661  TRFQPGFLNRQIITLLSVLGVPDEIFWDMQESMLYKLNRILDDTDVAFEVLTASCAEQGN 720

Query: 721  AAAIMLSAGFEPRTEPHLRGMLMCIRAAQLWGLREKARIFVTEGRWCMGCFDESGVLQEG 780
             AAIMLSAGF+P+TEPHLRGML  +R AQLWGLREK+RIFVT GRW MGC DE+G+L+ G
Sbjct: 721  TAAIMLSAGFKPKTEPHLRGMLSSVRIAQLWGLREKSRIFVTSGRWLMGCLDEAGILEHG 780

Query: 781  QCFIQVSTPLLEKCFSKHGSLFAETKNNLTVVRGTVVIAKNPCLHPGDVRILEAVDAPEL 840
            QCFIQVS P +E CFSKHGS F ETK +L VV+G V IAKNPCLHPGDVRILEAVD P+L
Sbjct: 781  QCFIQVSKPSIENCFSKHGSRFKETKTDLEVVKGYVAIAKNPCLHPGDVRILEAVDVPQL 840

Query: 841  HHLYDCLVFPRNGERPHTNEASGSDLDGDLYFTTWDGNLIPPSKKSWPPMEYAPAEVKTL 900
            HH+YDCL+FP+ G+RPHTNEASGSDLDGDLYF  WD  LIPP++KS+P M Y  AE K+L
Sbjct: 841  HHMYDCLIFPQKGDRPHTNEASGSDLDGDLYFVAWDQKLIPPNRKSYPAMHYDAAEEKSL 900

Query: 901  QRKITRWDIMEFFAKNMINESLGTICNAHVVHADRSKHGALDENCIQLSELAATAVDFPK 960
             R +   DI++FFA+N+ NE LGTICNAHVVHADRS++GA+DE C+ L+ELAATAVDFPK
Sbjct: 901  GRAVNHQDIIDFFARNLANEQLGTICNAHVVHADRSEYGAMDEECLLLAELAATAVDFPK 960

Query: 961  TGKLVTMPPHLKPKLYPDFMGKEATQSYKSTKILGKMYRRIRDAYDDDDMITSRELNFTP 1020
            TGK+V+MP HLKPKLYPDFMGKE  Q+YKS KILG++YRR+++ YD+D   +S E +  P
Sbjct: 961  TGKIVSMPFHLKPKLYPDFMGKEDYQTYKSNKILGRLYRRVKEVYDEDAEASSEE-STDP 1020

Query: 1021 GDVHYDVDLEVAGAEDFIAEAWDQKCSYDGQLSGLLGQYKVNREEEIVTGHIWSMPKYVS 1080
              + YD  LE+ G ED I EAW  KC YDGQL GLLGQYKV +EEEIVTGHIWSMPKY S
Sbjct: 1021 SAIPYDAVLEIPGFEDLIPEAWGHKCLYDGQLIGLLGQYKVQKEEEIVTGHIWSMPKYTS 1080

Query: 1081 RKQGELKEKLKHSYSTLKKDFRQVFENLGPEFEQLTCDERNALYEKKASAWYQVAYHPTW 1140
            +KQGELKE+LKHSY++LKK+FR+VFE   P+ E L+ +E+N LYEKKASAWY V YHP W
Sbjct: 1081 KKQGELKERLKHSYNSLKKEFRKVFEETIPDHENLSEEEKNILYEKKASAWYHVTYHPEW 1140

Query: 1141 LKKSLELREPDAPEAVPMLSFPWIAADYLARIKIKCRRTKSFDPTKPINSLASYLSDRM 1198
            +KKSLEL++PD      MLSF WIAADYLARIKI+ R   S D  KP++SLA +L+ R+
Sbjct: 1141 VKKSLELQDPDESSHAAMLSFAWIAADYLARIKIRSREMGSIDSAKPVDSLAKFLAQRL 1196

[Close]
BLAST of CsGy2G023250 vs. ExPASy Swiss-Prot
Match: Q8LHH9 (Probable RNA-dependent RNA polymerase SHL2 OS=Oryza sativa subsp. japonica OX=39947 GN=SHL2 PE=2 SV=1)

HSP 1 Score: 1412.9 bits (3656), Expect = 0.0e+00
Identity = 688/1200 (57.33%), Postives = 876/1200 (73.00%), Query Frame = 0 

Query: 9    IVVTQVSFGGFDSDVKARDLMSYLESEIGLVDRCRLKTSWTPPESYPDFEV----SNVAN 68
            +V TQVS GGFD+ V A DL  +LE E+GLV RCR+KTSWTPP+SYPDF +    ++ + 
Sbjct: 27   LVTTQVSLGGFDAGVAAGDLADFLEHEVGLVWRCRVKTSWTPPDSYPDFALPTAPASASA 86

Query: 69   VIKSDDYKKVVPHAFVHFVSPDSAAEALHAAGRGELIFNDKLLKASLGPESPFHINQRRR 128
                  Y +V PHAFVHF  P+ A  A   AG   LI   K L+ +  P+S   ++ RR 
Sbjct: 87   AAAPPRYDRVPPHAFVHFARPEGARRAADLAGETRLILRGKPLRVASAPDSSLRVS-RRS 146

Query: 129  TKVPFKLSDVQVDIGNLTCHDGFSVAWRGPSSGMDFLVDPFDGTCKFCFTKDTAFSFKDN 188
            +  PF+  DV++++G L     F  AWRGP +G+D  VDPFDG C+  FT+DTAF+F   
Sbjct: 147  SIAPFRFPDVRLEVGALPSPGAFLAAWRGPDAGLDLSVDPFDGCCRLVFTRDTAFTFPGF 206

Query: 189  NKHTFLKCDYKMEFIVRDINQITRY-TDTSCYVILLQLTSSPCIWYRTADDDIAKLVPYD 248
             +   ++CD K+EF VRD+ ++  Y  D S   +LL+L ++P + YRTADDD  + VP+D
Sbjct: 207  REVAAIRCDVKLEFPVRDVLEVRLYRLDCS---LLLRLAAAPLVHYRTADDDFHEPVPFD 266

Query: 249  LLDDDDPWIRTTDFTISGAIGRCNTFRVSVPPRYGIKLNNAMNYLKEQRVHQVSL----- 308
            LLDDDDPWIRTTD T SGAIGRC  +R+S   R+  K++ A++Y++E+RV  V       
Sbjct: 267  LLDDDDPWIRTTDITPSGAIGRCGVYRISFSARFWPKMDRALDYMRERRVAIVDCGGGWG 326

Query: 309  -NRPPKILNEPDYGVQMTDHFFCILYKKDISFEILFLVNAVMHKGIINQHQMSDRFFDLL 368
              R   + +E ++G  M D FFC+ + + + F +LF+VNA++HKGIINQHQ++  FF LL
Sbjct: 327  PRRGLTVRDELEFGEPMQDVFFCLQHAEGLKFPLLFMVNALVHKGIINQHQLTPEFFSLL 386

Query: 369  RNQPNEVNLAALSHIHAFRRPVLDACKKLKLVQEWLLKNPTLLKRSKELVDIVEIRRLVI 428
                  VN+AAL      + PV DAC +LK     + +NP LL  SK   D  E+RRLVI
Sbjct: 387  GRSEENVNVAALRDFWGDKFPVFDACGRLKKALNRVARNPKLL-CSKVGDDHAEVRRLVI 446

Query: 429  TPSKAYCFPPEVELSNRVLRRYKDVADRFLRVTFMDEGMKKINSHVYTYYVAPIVKEITS 488
            TP++AYC PPEVE SNRVLR Y +VADRFLRVTFMDEGM+ +N++V   + APIVK++ S
Sbjct: 447  TPTRAYCLPPEVERSNRVLRHYHEVADRFLRVTFMDEGMQVLNNNVLNSFTAPIVKDLMS 506

Query: 489  SSFPQKTKIFARMKHILKHGFHLCGRKYSFLAYSSNQLRDQSAWFFAECKSISVDAILGW 548
            + F QKT ++ R++ +L  GFH+CGRKYSFLA+SSNQLRD+SAWFFAE +  +V+AI  W
Sbjct: 507  NFFQQKTTVYKRVRMLLTEGFHMCGRKYSFLAFSSNQLRDKSAWFFAEDRKTTVEAIRKW 566

Query: 549  MGKFTNKNVAKCAARIGQCFSSTYATIEVPRNMVNHDLSDVERNGYVFSDGIGTITPDLA 608
            MG+FT+KNVAK AAR+GQCFSSTYAT+ +  + V+    DV  N Y+FSDGIG ITPDLA
Sbjct: 567  MGRFTSKNVAKHAARMGQCFSSTYATVTMRPDEVDESFDDVVHNEYIFSDGIGKITPDLA 626

Query: 609  QEVADKLKMDGSPPCAYQIRYAGYKGVVATWPSKKDGIRLALRPSMNKFESNHRILEICS 668
             EVA++L++  +PP AYQIR+AG+KGV+A W    DG RL LRPSM KFESNH +LE+ S
Sbjct: 627  LEVAERLQLTDNPPSAYQIRFAGFKGVIAVWQGHGDGTRLFLRPSMRKFESNHLVLEVVS 686

Query: 669  WTRFQPGFLNRQIITLLSTLSVPDEIFWSMQETMISKLDRMITDTDVAFEVLTASCAEQG 728
            WT+FQPGFLNRQII LLS+L+VPD IFW MQETM+S L+ +++D DVAFEVLT SCA+ G
Sbjct: 687  WTKFQPGFLNRQIIILLSSLNVPDSIFWQMQETMLSNLNNILSDRDVAFEVLTTSCADDG 746

Query: 729  NAAAIMLSAGFEPRTEPHLRGMLMCIRAAQLWGLREKARIFVTEGRWCMGCFDESGVLQE 788
            N AA+MLSAGFEPRTEPHL+ ML+ IR+AQL  L EKARIFV +GRW MGC DE GVL++
Sbjct: 747  NTAALMLSAGFEPRTEPHLKAMLLAIRSAQLQDLLEKARIFVPKGRWLMGCLDELGVLEQ 806

Query: 789  GQCFIQVSTPLLEKCFSKHGSLFAETKNNLTVVRGTVVIAKNPCLHPGDVRILEAVDAPE 848
            GQCFI+ + P L   F KHGS F+ T  N  V+ GTVVIAKNPCLHPGDVRILEAVD PE
Sbjct: 807  GQCFIRATVPSLNSYFVKHGSRFSSTDKNTEVILGTVVIAKNPCLHPGDVRILEAVDVPE 866

Query: 849  LHHLYDCLVFPRNGERPHTNEASGSDLDGDLYFTTWDGNLIPPSKKSWPPMEYAPAEVKT 908
            LHHL DCLVFP+ GERPH NEASGSDLDGDLYF TWD  LIPP KKSW PM+Y+P E K 
Sbjct: 867  LHHLVDCLVFPQKGERPHANEASGSDLDGDLYFVTWDEKLIPPGKKSWNPMDYSPPEAKQ 926

Query: 909  LQRKITRWDIMEFFAKNMINESLGTICNAHVVHADRSKHGALDENCIQLSELAATAVDFP 968
            L R++++ DI++FF KNMI+E+LG ICNAHVVHAD S++GA+DE CI L+ELAATAVDFP
Sbjct: 927  LPRQVSQHDIIDFFLKNMISENLGRICNAHVVHADLSEYGAMDEKCIHLAELAATAVDFP 986

Query: 969  KTGKLVTMPPHLKPKLYPDFMGKEATQSYKSTKILGKMYRRIRDAYDDDDMITSRELNFT 1028
            KTGKL  MPPHLKPK+YPDFMGKE  QSYKS KILG++YR I++A + D  + S+E+  T
Sbjct: 987  KTGKLAIMPPHLKPKVYPDFMGKEDGQSYKSEKILGRLYRSIQEASNGD--VVSQEV-CT 1046

Query: 1029 PGDVHYDVDLEVAGAEDFIAEAWDQKCSYDGQLSGLLGQYKVNREEEIVTGHIWSMPKYV 1088
            P D+ YD+DLEV GA DF+A AW  KCSYD QLS LL QY+V  E E+VTGHI  + K  
Sbjct: 1047 PNDLPYDIDLEVPGASDFLASAWQCKCSYDAQLSALLSQYRVRTEAELVTGHITFLVKNS 1106

Query: 1089 SRKQGELKEKLKHSYSTLKKDFRQVFENLGPEFEQLTCDERNALYEKKASAWYQVAYHPT 1148
            S+KQG++K++LK +YS L+K+F+  FE++  +  ++  DE+N LYE KASAWYQV YHP 
Sbjct: 1107 SKKQGDIKDRLKTAYSALRKEFKSTFESIASDQCEIGDDEKNLLYEMKASAWYQVTYHPK 1166

Query: 1149 WLKKSLELREPDAPEAVPMLSFPWIAADYLARIKIKCRRTKSFDPTKPINSLASYLSDRM 1198
            W++KS  +  PD  E    LSF WI  DYLARIK++C      +  KP+  LA+Y+S+R+
Sbjct: 1167 WVEKSRGILGPDGEEIPASLSFAWIPVDYLARIKLRCHGKVRVEGQKPVERLAAYISERI 1218

[Close]
BLAST of CsGy2G023250 vs. ExPASy Swiss-Prot
Match: Q9LQV2 (RNA-dependent RNA polymerase 1 OS=Arabidopsis thaliana OX=3702 GN=RDR1 PE=2 SV=1)

HSP 1 Score: 571.2 bits (1471), Expect = 2.7e-161
Identity = 355/1000 (35.50%), Postives = 540/1000 (54.00%), Query Frame = 0 

Query: 193  DYKMEFIVRDINQITRYT--DTSCYVILLQLTSSPCIWYRTADDDIAKLVPYDLLD---- 252
            DY++E    +I QI  ++    S   +++Q+  +P I+ +  +D    L+ + ++D    
Sbjct: 143  DYRLELSYENIWQIDLHSPQGRSSKFLVIQVIGAPKIFEK--EDQPINLL-FGIMDFYSD 202

Query: 253  -DDDPWIRTTDFTISGAIGRCNTFRVSVPPRYGIK--LNNAMNYLKEQRVHQVSLNRPPK 312
              D+ WIRTTDFT S  IG+   F + +P    +     N  NY  E R     +     
Sbjct: 203  GSDEQWIRTTDFTSSSCIGQSTAFCLELPVHLNVPDFRENFANY-AEHRASSFLIESGSS 262

Query: 313  ILNEPDYGVQMTDHFFCILYKKDISFEILFLVNAVMHKGIINQHQMSDRFFDLLRNQPNE 372
              +  +  V + D          + FEILF +N ++    ++   +   F+ LL  +  +
Sbjct: 263  YSSNANTLVPVVDP----PPGFSLPFEILFKLNTLVQNACLSGPALDLDFYRLLNQK--K 322

Query: 373  VNLAALSHIHAFRRPVLDACKK-----LKLVQEWLLKNPTLLKRSKELVD-IVEIRRLVI 432
             + A + H       + + C +         ++W+ K    L  +  L D +V + R+ +
Sbjct: 323  YDRALIDHCLEKLFHLGECCYEPAHWLRDEYKKWISKGKLPLSPTISLDDGLVYMYRVQV 382

Query: 433  TPSKAYCFPPEVELSNRVLRRYKDVADRFLRVTFMDEGMKKINSHVYTYYVAPIVKEITS 492
            TP++ Y   PEV +SNRVLR Y    + FLRV+F+DE ++K+ S          +     
Sbjct: 383  TPARVYFSGPEVNVSNRVLRHYSKYINNFLRVSFVDEDLEKVRS----------MDLSPR 442

Query: 493  SSFPQKTKIFARMKHILKHGFHLCGRKYSFLAYSSNQLRDQSAWFFAECKSISVDAILGW 552
            SS  ++TK++ R+  +L+ G  +  +K+ FLA+SS+QLR+ SAW FA    I+   I  W
Sbjct: 443  SSTQRRTKLYDRIYSVLRDGIVIGDKKFEFLAFSSSQLRENSAWMFAPIDRITAAHIRAW 502

Query: 553  MGKFTN-KNVAKCAARIGQCFSSTYATIEVPRNMVNHDLSDVE----RNGYVFSDGIGTI 612
            MG F + +NVAK AAR+GQ FSS+  T+ V  + +   + DVE       YVFSDGIG I
Sbjct: 503  MGDFDHIRNVAKYAARLGQSFSSSRETLNVRSDEI-EVIPDVEIISLGTRYVFSDGIGKI 562

Query: 613  TPDLAQEVADKLKMDGSPPCAYQIRYAGYKGVVATWPSKKDGIRLALRPSMNKFESNHRI 672
            + + A++VA K  +    P A+QIRY GYKGVVA  P+     +L+LR SM+KFES +  
Sbjct: 563  SAEFARKVARKCGLTEFSPSAFQIRYGGYKGVVAVDPNSSK--KLSLRKSMSKFESENTK 622

Query: 673  LEICSWTRFQPGFLNRQIITLLSTLSVPDEIFWSMQETMISKLDRMITDTDVAFEVL-TA 732
            L++ +W+++QP ++NRQ+ITLLSTL V D +F   Q  ++ +LD ++T    A E L   
Sbjct: 623  LDVLAWSKYQPCYMNRQLITLLSTLGVTDSVFEKKQREVVDRLDAILTHPLEAHEALGLM 682

Query: 733  SCAEQGNAAAIMLSAGFEPRTEPHLRGMLMCIRAAQLWGLREKARIFVTEGRWCMGCFDE 792
            +  E  N    ++  G++P  EP L  ML   RA++L  LR K RIF++ GR  MGC DE
Sbjct: 683  APGENTNILKALILCGYKPDAEPFLSMMLQNFRASKLLELRTKTRIFISGGRSMMGCLDE 742

Query: 793  SGVLQEGQCFIQVSTPLLEKCFSKHGSLFAETKNNLTVVRGTVVIAKNPCLHPGDVRILE 852
            +  L+ GQ  +Q S P+      + G  F        ++ G VV+AKNPCLHPGDVR+L+
Sbjct: 743  TRTLEYGQVVVQYSDPM------RPGRRF--------IITGPVVVAKNPCLHPGDVRVLQ 802

Query: 853  AVDAPELHHLYDCLVFPRNGERPHTNEASGSDLDGDLYFTTWDGNLIPPSKKSWPPMEYA 912
            AV+ P L+H+ DC+VFP+ G RPH NE SGSDLDGD+YF  WD  L+PP  ++  PM+Y 
Sbjct: 803  AVNVPALNHMVDCVVFPQKGLRPHPNECSGSDLDGDIYFVCWDQELVPP--RTSEPMDYT 862

Query: 913  PAEVKTLQRKITRWDIMEFFAKNMINESLGTICNAHVVHADRSKHGALDENCIQLSELAA 972
            P   + L   +T  ++ E+FA  ++N+SLG I NAH   AD+    A  + CI+L++  +
Sbjct: 863  PEPTQILDHDVTIEEVEEYFANYIVNDSLGIIANAHTAFADKEPLKAFSDPCIELAKKFS 922

Query: 973  TAVDFPKTGKLVTMPPHLKPKLYPDFMGKEATQSYKSTKILGKMYRRIRDAYDDDDMITS 1032
            TAVDFPKTG    +P HL  K YPDFM K    +Y+S  ++GK++R +++      +I+ 
Sbjct: 923  TAVDFPKTGVAAVIPQHLYVKEYPDFMEKPDKPTYESKNVIGKLFREVKER--APPLISI 982

Query: 1033 RELNFTPGDVHYDVDLEVAGAEDFIAEAWDQKCSYDGQLSGLLGQYKVNREEEIVTGHIW 1092
            +          YD D+EV G E+++ EA+ QK +YD +L  L+  Y +  E EI++G I 
Sbjct: 983  KSFTLDVASKSYDKDMEVDGFEEYVDEAFYQKANYDFKLGNLMDYYGIKTEAEILSGGIM 1042

Query: 1093 SMPKYVSRKQGELKEKLKHSYSTLKKDFRQVFENLGPEFEQLTCDERNALYEKKASAWYQ 1152
             M K  ++++    E +  +   L+K+   +F             E       KASAWY 
Sbjct: 1043 RMSKSFTKRRD--AESIGRAVRALRKETLSLF----------NASEEEENESAKASAWYH 1084

Query: 1153 VAYHPTWLKKSLELREPDAPEAVPMLSFPWIAADYLARIK 1172
            V YH ++     E    D       LSF W   D L RIK
Sbjct: 1103 VTYHSSYWGLYNEGLNRD-----HFLSFAWCVYDKLVRIK 1084

[Close]
BLAST of CsGy2G023250 vs. ExPASy Swiss-Prot
Match: Q7XM31 (Probable RNA-dependent RNA polymerase 2 OS=Oryza sativa subsp. japonica OX=39947 GN=RDR2 PE=2 SV=1)

HSP 1 Score: 558.9 bits (1439), Expect = 1.4e-157
Identity = 364/1021 (35.65%), Postives = 537/1021 (52.60%), Query Frame = 0 

Query: 194  YKMEFIVRDINQITRYTDTSCYVILLQLTSSPCIWYRTADDDIAKLVPYDLL-----DDD 253
            YK+E +  D+      T      ILLQL  +P I    +   +      D       D  
Sbjct: 155  YKLEVLFEDMKDCLGCTLDGMGAILLQLNYAPRIHTAISGPAVNSRFMDDRFHACKEDAK 214

Query: 254  DPWIRTTDFTISGAIGRCNTFRVSVPPRYGIKLNNAMNYLKEQRVHQVSLNRPPKILNEP 313
              W+R  DFT + + GRC+T          +KL  +       +    S N     +N  
Sbjct: 215  FSWVRALDFTPNYSFGRCSTL--------VLKLGKSALVSDILKSLPFSGNLGELTMNSM 274

Query: 314  DYGVQMTDHFFCILY---KKDISFEILFLVNAVMHKGIINQHQMSDRFFDLLRNQPNEVN 373
            D GV  + +   +++      + +E+LF +N++MH G I    ++   F  L+  P +V+
Sbjct: 275  D-GVGASSNVVPLVHCPRDYSVPYEVLFRLNSLMHMGKIVAKHVNADLFKALQELPVDVS 334

Query: 374  LAALSHIHAFRRP-------VLDACKKLKLVQEWLLKNPTLLKRSKELVDIVEIRRLVIT 433
                  +H            +      +K     LL N    +  ++L   ++  R+ IT
Sbjct: 335  RRIFEKMHKLESTCYGPLQFIQQEAYSMKRSHNVLLSNEGEGEGERKL---MKCYRVNIT 394

Query: 434  PSKAYCFPPEVELSNRVLRRYKDVADRFLRVTFMDEGMKKINSHVYTYYVAPIVKEITSS 493
            PSK +CF PE E++N V++ +   A  F+RVTF+DE   K++S+  +  +     E    
Sbjct: 395  PSKIFCFGPEEEVTNYVVKHHSAYASDFVRVTFVDEDWSKLSSNAISARI-----EQGFF 454

Query: 494  SFPQKTKIFARMKHILKHGFHLCGRKYSFLAYSSNQLRDQSAWFFAECKSISVDAILGWM 553
            S P KT ++ R+  ILK GF +  + + FLA+S++QLR  S W FA   S++   I  WM
Sbjct: 455  SKPFKTGLYYRILSILKKGFSIGPKNFEFLAFSASQLRGNSVWMFASNASLNAGGIRRWM 514

Query: 554  GKFTN-KNVAKCAARIGQCFSSTYATIEVPRNMVNHDLSDVE----RNGYVFSDGIGTIT 613
            G F N ++V+KCAAR+GQ FSS+  T EV R  V   + D+E     + Y+FSDGIG I+
Sbjct: 515  GHFENIRSVSKCAARMGQLFSSSRQTFEVLRWDV-EVIPDIEITTDGSKYIFSDGIGKIS 574

Query: 614  PDLAQEVADKLKMDGSP-PCAYQIRYAGYKGVVATWPSKKDGIRLALRPSMNKFESNHRI 673
               A+ VA  + +D +  P A+QIRY GYKGV+A  P     I L+LRPSM KFES  R+
Sbjct: 575  LRFAKRVAHHVGLDPTNLPSAFQIRYGGYKGVIAIDP--MSSIDLSLRPSMKKFESESRM 634

Query: 674  LEICSWTRFQPGFLNRQIITLLSTLSVPDEIFWSMQETMISKLDRMITDTDVAFEVLTAS 733
            L I SW++ QP ++NR+II+LLSTL + DEIF +MQ+  + + + M+T+ +VA  VL   
Sbjct: 635  LNITSWSKSQPCYVNREIISLLSTLGIRDEIFVAMQQDEMRETEEMLTNKEVALSVLGKL 694

Query: 734  CAEQGNAAAIMLSAGFEPRTEPHLRGMLMCIRAAQLWGLREKARIFVTEGRWCMGCFDES 793
               +   A  ML  G+EP +EP+L  +L   +  +L  +R + +I V +GR  +GC DE+
Sbjct: 695  GGSETKTAVKMLLQGYEPSSEPYLSMILKAHQENRLTDIRTRCKIHVPKGRVLIGCLDET 754

Query: 794  GVLQEGQCFIQVSTPLLEKCFSKHGSLFAETKNNLTVVRGTVVIAKNPCLHPGDVRILEA 853
            GVL+ GQ +I+++    E+  S     + +     TVV G V I KNPCLHPGD+R+LEA
Sbjct: 755  GVLEYGQVYIRITKNSKEQKDSNQSYFYNDDGKTATVV-GKVAITKNPCLHPGDIRVLEA 814

Query: 854  VDAPELHHLYDCLVFPRNGERPHTNEASGSDLDGDLYFTTWDGNLIPPSKKSWPPMEYAP 913
            +  P+L  + DCLVFP+ GERPH NE SG DLDGDLYF TWD  LIP  +K   PM+Y  
Sbjct: 815  IYDPDLVGMVDCLVFPQRGERPHPNECSGGDLDGDLYFITWDDKLIP--EKVDTPMDYTA 874

Query: 914  AEVKTLQRKITRWDIMEFFAKNMINESLGTICNAHVVHADRSKHGALDENCIQLSELAAT 973
               + +   +T  +I + F   MIN+SLG I  AH++HADRS   A    C+QL+ L + 
Sbjct: 875  TRPRIMDHVVTLEEIQKHFVDYMINDSLGAISTAHLIHADRSPLKARSPECLQLATLHSM 934

Query: 974  AVDFPKTGKLVTMPPHLKPKLYPDFMGKEATQSYKSTKILGKMYRRI---RDAYDDDDMI 1033
            AVDF KTG    MP  L+P+ YPDFM +     Y S  +LGK+YR      +   D   +
Sbjct: 935  AVDFAKTGAPAEMPRTLRPREYPDFMERWEKPMYISNGVLGKLYRSAMGHMEKSGDSGAL 994

Query: 1034 TSRELNFTPGDVHYDVDLEVAGAEDFIAEAWDQKCSYDGQLSGLLGQYKVNREEEIVTGH 1093
            +S     +P    YD DLEV G+++F+  A +    Y+ +L+ L+  Y+   E+EI+TG+
Sbjct: 995  SSSSAQPSP---TYDPDLEVPGSDEFLQAAEEYYELYEEKLTTLMNYYRAELEDEILTGN 1054

Query: 1094 IWSMPKYVSR---KQGELKEKLKHSYSTLKKDFRQVFENLGPEFEQLTCDERNALYEKKA 1153
            I +   Y+ R   +  E+K+++  +   L ++ R            L    +     + A
Sbjct: 1055 IRNKMLYLKRDNKRYFEMKDRIVAAVDALHREAR----------GWLLSSRKEEDASRMA 1114

Query: 1154 SAWYQVAYHPTWLKKSLELREPDAPEAVPMLSFPWIAADYLARIK----IKCRRTKSFDP 1184
            SAWY+V YH            PD        SFPWIA D L  IK    ++ RR K  D 
Sbjct: 1115 SAWYRVTYH------------PDRRRGKRFWSFPWIACDNLLAIKASSQLRRRRQKDDDS 1127

[Close]
BLAST of CsGy2G023250 vs. ExPASy Swiss-Prot
Match: Q0DXS3 (Probable RNA-dependent RNA polymerase 1 OS=Oryza sativa subsp. japonica OX=39947 GN=RDR1 PE=2 SV=2)

HSP 1 Score: 543.1 bits (1398), Expect = 7.8e-153
Identity = 310/770 (40.26%), Postives = 450/770 (58.44%), Query Frame = 0 

Query: 420  SKAYCFPPEVELSNRVLRRYKDVADRFLRVTFMDEGMKKINSHVYTYYVAPIVKEITSSS 479
            S  Y + PE+ +SNRV+R +    + FLR++F+DE  +K+ +         +     S  
Sbjct: 7    STVYFYGPEINVSNRVVRNFSSDIENFLRISFVDEDCEKLRA-------TDLSPRSASGH 66

Query: 480  FPQKTKIFARMKHILKHGFHLCGRKYSFLAYSSNQLRDQSAWFFAECKSISVDAILGWMG 539
               +T ++ R+  +L  G  + G+ + FLA+SS+QLRD SAW FA  + ++   I  WMG
Sbjct: 67   DANRTALYKRVLSVLSDGITIGGKNFEFLAFSSSQLRDNSAWMFASRQGLAASDIRTWMG 126

Query: 540  KFTN-KNVAKCAARIGQCFSSTYATIEVPRNMVNHDLSDVERNG--YVFSDGIGTITPDL 599
             F N +NVAK AAR+GQ FSS+  T++V +  V  ++SD+ +NG  +VFSDGIG I+   
Sbjct: 127  DFRNIRNVAKYAARLGQSFSSSTETLKVQKYEV-EEISDI-KNGTQHVFSDGIGKISSAF 186

Query: 600  AQEVADKLKMDGSPPCAYQIRYAGYKGVVATWPSKKDGIRLALRPSMNKFESNHRILEIC 659
            A EVA K  +    P A+QIRY GYKGVVA  P+ +   +L+LR SM KF+S++  +++ 
Sbjct: 187  ANEVAMKCNLKRFAPSAFQIRYGGYKGVVAVDPTSR--WKLSLRKSMLKFQSDNITVDVL 246

Query: 660  SWTRFQPGFLNRQIITLLSTLSVPDEIFWSMQETMISKLDRMITDTDVAFEVL-TASCAE 719
            +++++QPGFLNRQ+ITLLSTL V D +F   QE  +++L++M+TD   A E +      E
Sbjct: 247  AYSKYQPGFLNRQLITLLSTLGVRDSVFEQKQEEAVNQLNKMVTDPQAAIEAIELMPMGE 306

Query: 720  QGNAAAIMLSAGFEPRTEPHLRGMLMCIRAAQLWGLREKARIFVTEGRWCMGCFDESGVL 779
              NA   +L  G++P  EP+L  +L   RA++L  L+ K+RI + +GR  MGC DE+  L
Sbjct: 307  ITNAVKELLLCGYQPDDEPYLSMLLQTFRASKLLELKTKSRILIPKGRAMMGCLDETRTL 366

Query: 780  QEGQCFIQVSTPLLEKCFSKHGSLFAETKNNLTVVRGTVVIAKNPCLHPGDVRILEAVDA 839
            + GQ FI+ ++ +                N+   V G VVIAKNPCLHPGD+RIL AVD 
Sbjct: 367  KYGQVFIRATSGV--------------NDNDRFTVTGKVVIAKNPCLHPGDIRILHAVDV 426

Query: 840  PELHHLYDCLVFPRNGERPHTNEASGSDLDGDLYFTTWDGNLIPPSKKSWPPMEYAPAEV 899
            P LHH+++C+VFP+ G RPH NE SGSDLDGD+YF +WD +LIPP  +   PM+Y PA  
Sbjct: 427  PVLHHMFNCVVFPQQGPRPHPNECSGSDLDGDIYFVSWDPSLIPP--RMVTPMDYTPAPT 486

Query: 900  KTLQRKITRWDIMEFFAKNMINESLGTICNAHVVHADRSKHGALDENCIQLSELAATAVD 959
            +TL   +T  ++ E+F   ++NESLG I NAHVV AD+    A    CI+L++L + AVD
Sbjct: 487  ETLDHDVTIEEVEEYFTNYIVNESLGMIANAHVVFADKEDLKAESSPCIELAKLFSIAVD 546

Query: 960  FPKTGKLVTMPPHLKPKLYPDFMGKEATQSYKSTKILGKMYRRIRDAYDDDDMITSRELN 1019
            FPKTG    +PP L  K YPDFM K    +Y+S  ++GK+YR I+         T RE+ 
Sbjct: 547  FPKTGVPALIPPELHVKEYPDFMEKLDKVTYESKGVIGKLYREIKKHTPHIKHFT-REV- 606

Query: 1020 FTPGDVHYDVDLEVAGAEDFIAEAWDQKCSYDGQLSGLLGQYKVNREEEIVTGHIWSMPK 1079
                   YD D+ V G ED+I EA   K  YD +L  L+  Y +  E EI++G I  M K
Sbjct: 607  ---ARRSYDTDMIVDGYEDYITEAMALKDEYDFKLGNLMDHYGIKSEAEIISGCILKMAK 666

Query: 1080 YVSRKQGELKEKLKHSYSTLKKDFRQVFENLGPEFEQLTCDER---NALYEKKASAWYQV 1139
              ++K     + ++ +  +L+K+ R         F +++ D+    +   E KASAWY V
Sbjct: 667  NFTKKSD--ADAIRLAVRSLRKEARS-------RFSEMSLDDNGHGHDASEAKASAWYHV 726

Query: 1140 AYHPTWLKKSLELREPDAPEAVPMLSFPWIAADYLARIKIKCRRTKSFDP 1183
             YHP +     E       E    +SFPW   + L RIK + +  +   P
Sbjct: 727  TYHPEFWGCYNE-----GYERPHFISFPWCIYEKLLRIKQRRKFVRKMQP 730

[Close]
BLAST of CsGy2G023250 vs. NCBI nr
Match: NP_001267634.1 (RNA-dependent RNA polymerase 6-like [Cucumis sativus] >XP_011648568.1 RNA-dependent RNA polymerase 6-like isoform X1 [Cucumis sativus] >ADU77019.1 RNA-dependent RNA polymerase 6 [Cucumis sativus] >KGN62947.1 hypothetical protein Csa_022486 [Cucumis sativus])

HSP 1 Score: 2454 bits (6360), Expect = 0.0
Identity = 1196/1197 (99.92%), Postives = 1197/1197 (100.00%), Query Frame = 0 

Query: 1    MGSEEGEKIVVTQVSFGGFDSDVKARDLMSYLESEIGLVDRCRLKTSWTPPESYPDFEVS 60
            MGSEEGEKIVVTQVSFGGFDSDVKARDLMSYLESEIGLVDRCRLKTSWTPPESYPDFEVS
Sbjct: 1    MGSEEGEKIVVTQVSFGGFDSDVKARDLMSYLESEIGLVDRCRLKTSWTPPESYPDFEVS 60

Query: 61   NVANVIKSDDYKKVVPHAFVHFVSPDSAAEALHAAGRGELIFNDKLLKASLGPESPFHIN 120
            NVANVIKSDDYKKVVPHAFVHFVSPDSAAEALHAAGRGELIFNDKLLKASLGPESPFHIN
Sbjct: 61   NVANVIKSDDYKKVVPHAFVHFVSPDSAAEALHAAGRGELIFNDKLLKASLGPESPFHIN 120

Query: 121  QRRRTKVPFKLSDVQVDIGNLTCHDGFSVAWRGPSSGMDFLVDPFDGTCKFCFTKDTAFS 180
            QRRRTKVPFKLSDVQVDIGNLTCHDGFSVAWRGPSSGMDFLVDPFDGTCKFCFTKDTAFS
Sbjct: 121  QRRRTKVPFKLSDVQVDIGNLTCHDGFSVAWRGPSSGMDFLVDPFDGTCKFCFTKDTAFS 180

Query: 181  FKDNNKHTFLKCDYKMEFIVRDINQITRYTDTSCYVILLQLTSSPCIWYRTADDDIAKLV 240
            FKDNNKHTFLKCDYKMEFIVRDINQITRYTDTSCYVILLQLT+SPCIWYRTADDDIAKLV
Sbjct: 181  FKDNNKHTFLKCDYKMEFIVRDINQITRYTDTSCYVILLQLTASPCIWYRTADDDIAKLV 240

Query: 241  PYDLLDDDDPWIRTTDFTISGAIGRCNTFRVSVPPRYGIKLNNAMNYLKEQRVHQVSLNR 300
            PYDLLDDDDPWIRTTDFTISGAIGRCNTFRVSVPPRYGIKLNNAMNYLKEQRVHQVSLNR
Sbjct: 241  PYDLLDDDDPWIRTTDFTISGAIGRCNTFRVSVPPRYGIKLNNAMNYLKEQRVHQVSLNR 300

Query: 301  PPKILNEPDYGVQMTDHFFCILYKKDISFEILFLVNAVMHKGIINQHQMSDRFFDLLRNQ 360
            PPKILNEPDYGVQMTDHFFCILYKKDISFEILFLVNAVMHKGIINQHQMSDRFFDLLRNQ
Sbjct: 301  PPKILNEPDYGVQMTDHFFCILYKKDISFEILFLVNAVMHKGIINQHQMSDRFFDLLRNQ 360

Query: 361  PNEVNLAALSHIHAFRRPVLDACKKLKLVQEWLLKNPTLLKRSKELVDIVEIRRLVITPS 420
            PNEVNLAALSHIHAFRRPVLDACKKLKLVQEWLLKNPTLLKRSKELVDIVEIRRLVITPS
Sbjct: 361  PNEVNLAALSHIHAFRRPVLDACKKLKLVQEWLLKNPTLLKRSKELVDIVEIRRLVITPS 420

Query: 421  KAYCFPPEVELSNRVLRRYKDVADRFLRVTFMDEGMKKINSHVYTYYVAPIVKEITSSSF 480
            KAYCFPPEVELSNRVLRRYKDVADRFLRVTFMDEGMKKINSHVYTYYVAPIVKEITSSSF
Sbjct: 421  KAYCFPPEVELSNRVLRRYKDVADRFLRVTFMDEGMKKINSHVYTYYVAPIVKEITSSSF 480

Query: 481  PQKTKIFARMKHILKHGFHLCGRKYSFLAYSSNQLRDQSAWFFAECKSISVDAILGWMGK 540
            PQKTKIFARMKHILKHGFHLCGRKYSFLAYSSNQLRDQSAWFFAECKSISVDAILGWMGK
Sbjct: 481  PQKTKIFARMKHILKHGFHLCGRKYSFLAYSSNQLRDQSAWFFAECKSISVDAILGWMGK 540

Query: 541  FTNKNVAKCAARIGQCFSSTYATIEVPRNMVNHDLSDVERNGYVFSDGIGTITPDLAQEV 600
            FTNKNVAKCAARIGQCFSSTYATIEVPRNMVNHDLSDVERNGYVFSDGIGTITPDLAQEV
Sbjct: 541  FTNKNVAKCAARIGQCFSSTYATIEVPRNMVNHDLSDVERNGYVFSDGIGTITPDLAQEV 600

Query: 601  ADKLKMDGSPPCAYQIRYAGYKGVVATWPSKKDGIRLALRPSMNKFESNHRILEICSWTR 660
            ADKLKMDGSPPCAYQIRYAGYKGVVATWPSKKDGIRLALRPSMNKFESNHRILEICSWTR
Sbjct: 601  ADKLKMDGSPPCAYQIRYAGYKGVVATWPSKKDGIRLALRPSMNKFESNHRILEICSWTR 660

Query: 661  FQPGFLNRQIITLLSTLSVPDEIFWSMQETMISKLDRMITDTDVAFEVLTASCAEQGNAA 720
            FQPGFLNRQIITLLSTLSVPDEIFWSMQETMISKLDRMITDTDVAFEVLTASCAEQGNAA
Sbjct: 661  FQPGFLNRQIITLLSTLSVPDEIFWSMQETMISKLDRMITDTDVAFEVLTASCAEQGNAA 720

Query: 721  AIMLSAGFEPRTEPHLRGMLMCIRAAQLWGLREKARIFVTEGRWCMGCFDESGVLQEGQC 780
            AIMLSAGFEPRTEPHLRGMLMCIRAAQLWGLREKARIFVTEGRWCMGCFDESGVLQEGQC
Sbjct: 721  AIMLSAGFEPRTEPHLRGMLMCIRAAQLWGLREKARIFVTEGRWCMGCFDESGVLQEGQC 780

Query: 781  FIQVSTPLLEKCFSKHGSLFAETKNNLTVVRGTVVIAKNPCLHPGDVRILEAVDAPELHH 840
            FIQVSTPLLEKCFSKHGSLFAETKNNLTVVRGTVVIAKNPCLHPGDVRILEAVDAPELHH
Sbjct: 781  FIQVSTPLLEKCFSKHGSLFAETKNNLTVVRGTVVIAKNPCLHPGDVRILEAVDAPELHH 840

Query: 841  LYDCLVFPRNGERPHTNEASGSDLDGDLYFTTWDGNLIPPSKKSWPPMEYAPAEVKTLQR 900
            LYDCLVFPRNGERPHTNEASGSDLDGDLYFTTWDGNLIPPSKKSWPPMEYAPAEVKTLQR
Sbjct: 841  LYDCLVFPRNGERPHTNEASGSDLDGDLYFTTWDGNLIPPSKKSWPPMEYAPAEVKTLQR 900

Query: 901  KITRWDIMEFFAKNMINESLGTICNAHVVHADRSKHGALDENCIQLSELAATAVDFPKTG 960
            KITRWDIMEFFAKNMINESLGTICNAHVVHADRSKHGALDENCIQLSELAATAVDFPKTG
Sbjct: 901  KITRWDIMEFFAKNMINESLGTICNAHVVHADRSKHGALDENCIQLSELAATAVDFPKTG 960

Query: 961  KLVTMPPHLKPKLYPDFMGKEATQSYKSTKILGKMYRRIRDAYDDDDMITSRELNFTPGD 1020
            KLVTMPPHLKPKLYPDFMGKEATQSYKSTKILGKMYRRIRDAYDDDDMITSRELNFTPGD
Sbjct: 961  KLVTMPPHLKPKLYPDFMGKEATQSYKSTKILGKMYRRIRDAYDDDDMITSRELNFTPGD 1020

Query: 1021 VHYDVDLEVAGAEDFIAEAWDQKCSYDGQLSGLLGQYKVNREEEIVTGHIWSMPKYVSRK 1080
            VHYDVDLEVAGAEDFIAEAWDQKCSYDGQLSGLLGQYKVNREEEIVTGHIWSMPKYVSRK
Sbjct: 1021 VHYDVDLEVAGAEDFIAEAWDQKCSYDGQLSGLLGQYKVNREEEIVTGHIWSMPKYVSRK 1080

Query: 1081 QGELKEKLKHSYSTLKKDFRQVFENLGPEFEQLTCDERNALYEKKASAWYQVAYHPTWLK 1140
            QGELKEKLKHSYSTLKKDFRQVFENLGPEFEQLTCDERNALYEKKASAWYQVAYHPTWLK
Sbjct: 1081 QGELKEKLKHSYSTLKKDFRQVFENLGPEFEQLTCDERNALYEKKASAWYQVAYHPTWLK 1140

Query: 1141 KSLELREPDAPEAVPMLSFPWIAADYLARIKIKCRRTKSFDPTKPINSLASYLSDRM 1197
            KSLELREPDAPEAVPMLSFPWIAADYLARIKIKCRRTKSFDPTKPINSLASYLSDRM
Sbjct: 1141 KSLELREPDAPEAVPMLSFPWIAADYLARIKIKCRRTKSFDPTKPINSLASYLSDRM 1197

[Close]
BLAST of CsGy2G023250 vs. NCBI nr
Match: XP_008445204.1 (PREDICTED: RNA-dependent RNA polymerase 6 [Cucumis melo] >XP_016900057.1 PREDICTED: RNA-dependent RNA polymerase 6 [Cucumis melo] >KAA0064927.1 RNA-dependent RNA polymerase 6 [Cucumis melo var. makuwa])

HSP 1 Score: 2392 bits (6199), Expect = 0.0
Identity = 1163/1197 (97.16%), Postives = 1182/1197 (98.75%), Query Frame = 0 

Query: 1    MGSEEGEKIVVTQVSFGGFDSDVKARDLMSYLESEIGLVDRCRLKTSWTPPESYPDFEVS 60
            MGSEE EKIVVTQVSFGGFDSDVKARDLMSYLESEIGLVDRCRLKTSWTPPESYPDFEVS
Sbjct: 1    MGSEESEKIVVTQVSFGGFDSDVKARDLMSYLESEIGLVDRCRLKTSWTPPESYPDFEVS 60

Query: 61   NVANVIKSDDYKKVVPHAFVHFVSPDSAAEALHAAGRGELIFNDKLLKASLGPESPFHIN 120
            NVANVIKSDDYKKVVPHAFVHFVSPDSAAEALHAAGRGEL+FN KLLKASLGPESPFHIN
Sbjct: 61   NVANVIKSDDYKKVVPHAFVHFVSPDSAAEALHAAGRGELLFNGKLLKASLGPESPFHIN 120

Query: 121  QRRRTKVPFKLSDVQVDIGNLTCHDGFSVAWRGPSSGMDFLVDPFDGTCKFCFTKDTAFS 180
            QRRRTKVPFKLSDVQVDIGNLTCHDGFSVAWRGPSSGMDFLVDPFDGTCKFCFTKDTAFS
Sbjct: 121  QRRRTKVPFKLSDVQVDIGNLTCHDGFSVAWRGPSSGMDFLVDPFDGTCKFCFTKDTAFS 180

Query: 181  FKDNNKHTFLKCDYKMEFIVRDINQITRYTDTSCYVILLQLTSSPCIWYRTADDDIAKLV 240
            FKDNNK+T LKCDYK+EFIVRDINQI RYTDTSCYVILLQLTSSPCIWYRTADDDIAK V
Sbjct: 181  FKDNNKYTVLKCDYKLEFIVRDINQIKRYTDTSCYVILLQLTSSPCIWYRTADDDIAKSV 240

Query: 241  PYDLLDDDDPWIRTTDFTISGAIGRCNTFRVSVPPRYGIKLNNAMNYLKEQRVHQVSLNR 300
            PYDLLDDDDPWIRTTDFTISGAIGRCNTFRVSVPPRYGIKLNNAMNYLKEQRVHQVSLNR
Sbjct: 241  PYDLLDDDDPWIRTTDFTISGAIGRCNTFRVSVPPRYGIKLNNAMNYLKEQRVHQVSLNR 300

Query: 301  PPKILNEPDYGVQMTDHFFCILYKKDISFEILFLVNAVMHKGIINQHQMSDRFFDLLRNQ 360
            PPKILNEPDYGVQMTDHFFCI YK+DISFEILFLVNAVMHKGIINQHQMSDRFFDLLRNQ
Sbjct: 301  PPKILNEPDYGVQMTDHFFCIFYKEDISFEILFLVNAVMHKGIINQHQMSDRFFDLLRNQ 360

Query: 361  PNEVNLAALSHIHAFRRPVLDACKKLKLVQEWLLKNPTLLKRSKELVDIVEIRRLVITPS 420
            PNEVNLAALSHIH++RRPVLDACKKLKLVQEWLLKNPTL KRSKELVDIVEIRRLVITPS
Sbjct: 361  PNEVNLAALSHIHSYRRPVLDACKKLKLVQEWLLKNPTLWKRSKELVDIVEIRRLVITPS 420

Query: 421  KAYCFPPEVELSNRVLRRYKDVADRFLRVTFMDEGMKKINSHVYTYYVAPIVKEITSSSF 480
            KAYCFPPEVELSNRVLRRYKDVADRFLRVTFMDEGMKKINSHVYTYYVAPIVKEITSSSF
Sbjct: 421  KAYCFPPEVELSNRVLRRYKDVADRFLRVTFMDEGMKKINSHVYTYYVAPIVKEITSSSF 480

Query: 481  PQKTKIFARMKHILKHGFHLCGRKYSFLAYSSNQLRDQSAWFFAECKSISVDAILGWMGK 540
            PQKTKIFARMKHILKHGFHLCGRKYSFLAYSSNQLRDQSAWFFAECK+ISVD ILGWMGK
Sbjct: 481  PQKTKIFARMKHILKHGFHLCGRKYSFLAYSSNQLRDQSAWFFAECKNISVDGILGWMGK 540

Query: 541  FTNKNVAKCAARIGQCFSSTYATIEVPRNMVNHDLSDVERNGYVFSDGIGTITPDLAQEV 600
            FTNKNVAKCAARIGQCFSSTYATIEVPRNMVNH+L DVERNGYVFSDGIGTITPDLAQEV
Sbjct: 541  FTNKNVAKCAARIGQCFSSTYATIEVPRNMVNHNLQDVERNGYVFSDGIGTITPDLAQEV 600

Query: 601  ADKLKMDGSPPCAYQIRYAGYKGVVATWPSKKDGIRLALRPSMNKFESNHRILEICSWTR 660
            ADKLKMDGS PCAYQIRYAGYKGVVATWPSK+DGIRLALRPSMNKFES+HRILEICSWTR
Sbjct: 601  ADKLKMDGSLPCAYQIRYAGYKGVVATWPSKEDGIRLALRPSMNKFESDHRILEICSWTR 660

Query: 661  FQPGFLNRQIITLLSTLSVPDEIFWSMQETMISKLDRMITDTDVAFEVLTASCAEQGNAA 720
            FQPGFLNRQIITLLSTLSVPDEIFWSMQETMISKLDRMITDTDVAFEVLTASCAEQGNAA
Sbjct: 661  FQPGFLNRQIITLLSTLSVPDEIFWSMQETMISKLDRMITDTDVAFEVLTASCAEQGNAA 720

Query: 721  AIMLSAGFEPRTEPHLRGMLMCIRAAQLWGLREKARIFVTEGRWCMGCFDESGVLQEGQC 780
            AIMLSAGFEPRTEPHLRGMLMCIRAAQLWGLREKARIFVTEGRWCMGCFDESGVLQEGQC
Sbjct: 721  AIMLSAGFEPRTEPHLRGMLMCIRAAQLWGLREKARIFVTEGRWCMGCFDESGVLQEGQC 780

Query: 781  FIQVSTPLLEKCFSKHGSLFAETKNNLTVVRGTVVIAKNPCLHPGDVRILEAVDAPELHH 840
            FIQVSTPLLEKCFSKHGSLFAETKNNLTVVRGTVVIAKNPCLHPGDVRILEAVDAPELHH
Sbjct: 781  FIQVSTPLLEKCFSKHGSLFAETKNNLTVVRGTVVIAKNPCLHPGDVRILEAVDAPELHH 840

Query: 841  LYDCLVFPRNGERPHTNEASGSDLDGDLYFTTWDGNLIPPSKKSWPPMEYAPAEVKTLQR 900
            LYDCLVFP+NGERPHTNEASGSDLDGDLYFTTWD NLIPPSKKSWPPMEYAPA+VKTLQR
Sbjct: 841  LYDCLVFPQNGERPHTNEASGSDLDGDLYFTTWDENLIPPSKKSWPPMEYAPADVKTLQR 900

Query: 901  KITRWDIMEFFAKNMINESLGTICNAHVVHADRSKHGALDENCIQLSELAATAVDFPKTG 960
            KITR DIMEFFAKNMINESLGTICNAHVVHADRSK+GALDENCIQLSELAATAVDFPKTG
Sbjct: 901  KITRLDIMEFFAKNMINESLGTICNAHVVHADRSKYGALDENCIQLSELAATAVDFPKTG 960

Query: 961  KLVTMPPHLKPKLYPDFMGKEATQSYKSTKILGKMYRRIRDAYDDDDMITSRELNFTPGD 1020
            K+VTMPPHLKPKLYPDFMGKEATQSYKSTKILGKMYRRIRDAYDDDDMITSRELNFTPGD
Sbjct: 961  KIVTMPPHLKPKLYPDFMGKEATQSYKSTKILGKMYRRIRDAYDDDDMITSRELNFTPGD 1020

Query: 1021 VHYDVDLEVAGAEDFIAEAWDQKCSYDGQLSGLLGQYKVNREEEIVTGHIWSMPKYVSRK 1080
            VHYDVDLEVAGAEDFIAEAW+QKCSYDGQLSGLLGQYKVNREEEIVTGHIWSMPKYVSRK
Sbjct: 1021 VHYDVDLEVAGAEDFIAEAWNQKCSYDGQLSGLLGQYKVNREEEIVTGHIWSMPKYVSRK 1080

Query: 1081 QGELKEKLKHSYSTLKKDFRQVFENLGPEFEQLTCDERNALYEKKASAWYQVAYHPTWLK 1140
            QGELKEKLKHSYSTLKKDFRQVFEN+GPEFEQLTCDERNA YEKKASAWYQVAYHPTWLK
Sbjct: 1081 QGELKEKLKHSYSTLKKDFRQVFENIGPEFEQLTCDERNAFYEKKASAWYQVAYHPTWLK 1140

Query: 1141 KSLELREPDAPEAVPMLSFPWIAADYLARIKIKCRRTKSFDPTKPINSLASYLSDRM 1197
            KSLELREPDAPEA+PMLSFPWIAADYLARIKIKCRR KSFDPTKPINSL SYLS+R+
Sbjct: 1141 KSLELREPDAPEAIPMLSFPWIAADYLARIKIKCRRMKSFDPTKPINSLVSYLSERI 1197

[Close]
BLAST of CsGy2G023250 vs. NCBI nr
Match: XP_038885332.1 (RNA-dependent RNA polymerase 6 [Benincasa hispida] >XP_038885333.1 RNA-dependent RNA polymerase 6 [Benincasa hispida] >XP_038885334.1 RNA-dependent RNA polymerase 6 [Benincasa hispida] >XP_038885335.1 RNA-dependent RNA polymerase 6 [Benincasa hispida] >XP_038885336.1 RNA-dependent RNA polymerase 6 [Benincasa hispida] >XP_038885337.1 RNA-dependent RNA polymerase 6 [Benincasa hispida] >XP_038885339.1 RNA-dependent RNA polymerase 6 [Benincasa hispida])

HSP 1 Score: 2294 bits (5945), Expect = 0.0
Identity = 1108/1197 (92.56%), Postives = 1157/1197 (96.66%), Query Frame = 0 

Query: 1    MGSEEGEKIVVTQVSFGGFDSDVKARDLMSYLESEIGLVDRCRLKTSWTPPESYPDFEVS 60
            MGSEE EKIVVTQVS GGFDSDVKARDLMSYLESEIGLVDRCRLKTSWTPPESYPDF++S
Sbjct: 1    MGSEESEKIVVTQVSIGGFDSDVKARDLMSYLESEIGLVDRCRLKTSWTPPESYPDFDIS 60

Query: 61   NVANVIKSDDYKKVVPHAFVHFVSPDSAAEALHAAGRGELIFNDKLLKASLGPESPFHIN 120
            NVA+V+KSDDYKKVVPHAFVHF SPDSAA ALHAAGR EL  NDKLLK SLGPESP+HIN
Sbjct: 61   NVADVLKSDDYKKVVPHAFVHFASPDSAAGALHAAGRSELFLNDKLLKVSLGPESPYHIN 120

Query: 121  QRRRTKVPFKLSDVQVDIGNLTCHDGFSVAWRGPSSGMDFLVDPFDGTCKFCFTKDTAFS 180
            QRRRTKVPFKLSDVQVDIGNLTCHDGFSVAWRGPSSGM+FLVDPFDGTCKFCFTKDTAFS
Sbjct: 121  QRRRTKVPFKLSDVQVDIGNLTCHDGFSVAWRGPSSGMNFLVDPFDGTCKFCFTKDTAFS 180

Query: 181  FKDNNKHTFLKCDYKMEFIVRDINQITRYTDTSCYVILLQLTSSPCIWYRTADDDIAKLV 240
            FKDNNKHT LKCDYK+EF+VRDINQI RYTD SCYVILLQLTSSPCIWYRTADDDIAK V
Sbjct: 181  FKDNNKHTVLKCDYKVEFLVRDINQIKRYTDMSCYVILLQLTSSPCIWYRTADDDIAKSV 240

Query: 241  PYDLLDDDDPWIRTTDFTISGAIGRCNTFRVSVPPRYGIKLNNAMNYLKEQRVHQVSLNR 300
            PYDLLDDDDPWIRTTDFT SGAIGRCNT+RVSVPPRYGIKLNNAMNYLKEQRVHQ SLNR
Sbjct: 241  PYDLLDDDDPWIRTTDFTTSGAIGRCNTYRVSVPPRYGIKLNNAMNYLKEQRVHQASLNR 300

Query: 301  PPKILNEPDYGVQMTDHFFCILYKKDISFEILFLVNAVMHKGIINQHQMSDRFFDLLRNQ 360
            PPKILNEPDYGVQMTDHFFCI YK+D+SFEILFL+NAVMHKGIINQHQMSDRFFDLLRNQ
Sbjct: 301  PPKILNEPDYGVQMTDHFFCIHYKEDMSFEILFLINAVMHKGIINQHQMSDRFFDLLRNQ 360

Query: 361  PNEVNLAALSHIHAFRRPVLDACKKLKLVQEWLLKNPTLLKRSKELVDIVEIRRLVITPS 420
            PNEVNLAAL+HI+A+RRPV DACK+L LVQEWLLKNP L KRSK  VDI+EIRRLVITPS
Sbjct: 361  PNEVNLAALTHIYAYRRPVPDACKRLNLVQEWLLKNPRLWKRSKGQVDIIEIRRLVITPS 420

Query: 421  KAYCFPPEVELSNRVLRRYKDVADRFLRVTFMDEGMKKINSHVYTYYVAPIVKEITSSSF 480
            KAYCFPPEVELSNRVLRR+KDVADRFLRVTFMDEGMKKINSHVYTYYVAPIVKEITSSSF
Sbjct: 421  KAYCFPPEVELSNRVLRRFKDVADRFLRVTFMDEGMKKINSHVYTYYVAPIVKEITSSSF 480

Query: 481  PQKTKIFARMKHILKHGFHLCGRKYSFLAYSSNQLRDQSAWFFAECKSISVDAILGWMGK 540
            PQKTKIF RMKHILKHGF+LCGRKYSFLAYSSNQLRDQSAWFF+ECK+++VD+IL WMG+
Sbjct: 481  PQKTKIFGRMKHILKHGFYLCGRKYSFLAYSSNQLRDQSAWFFSECKNVTVDSILRWMGR 540

Query: 541  FTNKNVAKCAARIGQCFSSTYATIEVPRNMVNHDLSDVERNGYVFSDGIGTITPDLAQEV 600
            FT+KNVAKCAARIGQCFSSTYATIEVPRNMVNHDL DVERNGYVFSDGIGTITPDLAQEV
Sbjct: 541  FTHKNVAKCAARIGQCFSSTYATIEVPRNMVNHDLPDVERNGYVFSDGIGTITPDLAQEV 600

Query: 601  ADKLKMDGSPPCAYQIRYAGYKGVVATWPSKKDGIRLALRPSMNKFESNHRILEICSWTR 660
            ADKLK+DG+PPCAYQIRYAG KGVVATWPSK DGIRLALRPSMNKF+S+HRILEICSWTR
Sbjct: 601  ADKLKLDGTPPCAYQIRYAGCKGVVATWPSKGDGIRLALRPSMNKFQSDHRILEICSWTR 660

Query: 661  FQPGFLNRQIITLLSTLSVPDEIFWSMQETMISKLDRMITDTDVAFEVLTASCAEQGNAA 720
            FQPGFLNRQIITLLSTLSVPDEIFWSMQETM+SKLDRMITDTDVAF+VLTASCAEQGNAA
Sbjct: 661  FQPGFLNRQIITLLSTLSVPDEIFWSMQETMVSKLDRMITDTDVAFDVLTASCAEQGNAA 720

Query: 721  AIMLSAGFEPRTEPHLRGMLMCIRAAQLWGLREKARIFVTEGRWCMGCFDESGVLQEGQC 780
            AIMLSAGFEPRTEPHLRGMLMCIRAAQLWGLREKARIFVTEGRWCMGCFDESGVLQEGQC
Sbjct: 721  AIMLSAGFEPRTEPHLRGMLMCIRAAQLWGLREKARIFVTEGRWCMGCFDESGVLQEGQC 780

Query: 781  FIQVSTPLLEKCFSKHGSLFAETKNNLTVVRGTVVIAKNPCLHPGDVRILEAVDAPELHH 840
            FIQVSTPLL +CFSKHGSLFAE KNNLTVVRGTVVIAKNPCLHPGDVRILEAVDAPELHH
Sbjct: 781  FIQVSTPLLAQCFSKHGSLFAEIKNNLTVVRGTVVIAKNPCLHPGDVRILEAVDAPELHH 840

Query: 841  LYDCLVFPRNGERPHTNEASGSDLDGDLYFTTWDGNLIPPSKKSWPPMEYAPAEVKTLQR 900
            +YDCLVFP+NGERPHTNEASGSDLDGDLYF TWD NLIPPSK+SWPPMEYAPAEVKTL R
Sbjct: 841  MYDCLVFPQNGERPHTNEASGSDLDGDLYFITWDENLIPPSKRSWPPMEYAPAEVKTLTR 900

Query: 901  KITRWDIMEFFAKNMINESLGTICNAHVVHADRSKHGALDENCIQLSELAATAVDFPKTG 960
            ++TRWDIMEFFAKNMINESLGTICNAHVVHADRS++GALDENCIQLSELAATAVDFPKTG
Sbjct: 901  QVTRWDIMEFFAKNMINESLGTICNAHVVHADRSEYGALDENCIQLSELAATAVDFPKTG 960

Query: 961  KLVTMPPHLKPKLYPDFMGKEATQSYKSTKILGKMYRRIRDAYDDDDMITSRELNFTPGD 1020
            K+VTMPPHLKPKLYPDFMGKE TQSYKSTKILG+MYRRIRDAYDDD MITS ELNFTPGD
Sbjct: 961  KIVTMPPHLKPKLYPDFMGKEDTQSYKSTKILGRMYRRIRDAYDDD-MITSCELNFTPGD 1020

Query: 1021 VHYDVDLEVAGAEDFIAEAWDQKCSYDGQLSGLLGQYKVNREEEIVTGHIWSMPKYVSRK 1080
            VHYDVDLEVAGAEDFIAEAW+QKCSYDGQLSGLLGQYKVNREEEIVTGHIWSMPKY SRK
Sbjct: 1021 VHYDVDLEVAGAEDFIAEAWNQKCSYDGQLSGLLGQYKVNREEEIVTGHIWSMPKYSSRK 1080

Query: 1081 QGELKEKLKHSYSTLKKDFRQVFENLGPEFEQLTCDERNALYEKKASAWYQVAYHPTWLK 1140
            QGELKEKLKHSYSTLKK+FRQVFEN+GPE EQLT DERNALYE+KASAWYQVAYHPTWLK
Sbjct: 1081 QGELKEKLKHSYSTLKKEFRQVFENIGPEIEQLTDDERNALYERKASAWYQVAYHPTWLK 1140

Query: 1141 KSLELREPDAPEAVPMLSFPWIAADYLARIKIKCRRTKSFDPTKPINSLASYLSDRM 1197
            KS+ELREPD  E VPMLSFPWIAADYLARIKIKC+RTKSFDPTKPINSLASYLS+RM
Sbjct: 1141 KSMELREPDVLETVPMLSFPWIAADYLARIKIKCQRTKSFDPTKPINSLASYLSNRM 1196

[Close]
BLAST of CsGy2G023250 vs. NCBI nr
Match: KAG7029509.1 (RNA-dependent RNA polymerase 6, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 2250 bits (5830), Expect = 0.0
Identity = 1084/1197 (90.56%), Postives = 1145/1197 (95.66%), Query Frame = 0 

Query: 1    MGSEEGEKIVVTQVSFGGFDSDVKARDLMSYLESEIGLVDRCRLKTSWTPPESYPDFEVS 60
            MGSEE EKIVVTQVS GGFDSDVKA+DLMSYLESEIGLVDRCRLKTSWTPPESYPDF++ 
Sbjct: 1    MGSEESEKIVVTQVSIGGFDSDVKAQDLMSYLESEIGLVDRCRLKTSWTPPESYPDFDIV 60

Query: 61   NVANVIKSDDYKKVVPHAFVHFVSPDSAAEALHAAGRGELIFNDKLLKASLGPESPFHIN 120
            NVA+VIKSDDYKKVVPHAFVHF  PDSAA ALHAAGR EL  ND+LLK SLGPESP+H+N
Sbjct: 61   NVADVIKSDDYKKVVPHAFVHFALPDSAAGALHAAGRNELFLNDRLLKVSLGPESPYHVN 120

Query: 121  QRRRTKVPFKLSDVQVDIGNLTCHDGFSVAWRGPSSGMDFLVDPFDGTCKFCFTKDTAFS 180
            QRRRTKVPFKLS+V VDIGNLTC DGFSVAWRGPSSGMDFLVDPFDGTCKFCFT+DTAFS
Sbjct: 121  QRRRTKVPFKLSNVLVDIGNLTCQDGFSVAWRGPSSGMDFLVDPFDGTCKFCFTRDTAFS 180

Query: 181  FKDNNKHTFLKCDYKMEFIVRDINQITRYTDTSCYVILLQLTSSPCIWYRTADDDIAKLV 240
            FKDNNKHT LKCDYK+EF+VRDINQI RYTD SCYVILLQLTSSPCIWYRTADDDIAK V
Sbjct: 181  FKDNNKHTVLKCDYKVEFLVRDINQIKRYTDISCYVILLQLTSSPCIWYRTADDDIAKSV 240

Query: 241  PYDLLDDDDPWIRTTDFTISGAIGRCNTFRVSVPPRYGIKLNNAMNYLKEQRVHQVSLNR 300
            PYDLLDDDDPWIRTTDFTISGAIGRCNT+RVSVPPRYGIKLNNAMNYLKEQRVHQVSL R
Sbjct: 241  PYDLLDDDDPWIRTTDFTISGAIGRCNTYRVSVPPRYGIKLNNAMNYLKEQRVHQVSLKR 300

Query: 301  PPKILNEPDYGVQMTDHFFCILYKKDISFEILFLVNAVMHKGIINQHQMSDRFFDLLRNQ 360
            PPKILNEPDYGVQMTDHFFCI YK+DI FE+LFLVNAVMHKGIINQHQM+DRFFDLLRNQ
Sbjct: 301  PPKILNEPDYGVQMTDHFFCIHYKEDIPFELLFLVNAVMHKGIINQHQMTDRFFDLLRNQ 360

Query: 361  PNEVNLAALSHIHAFRRPVLDACKKLKLVQEWLLKNPTLLKRSKELVDIVEIRRLVITPS 420
            PNEV+LAAL+HIH +R PV DACK+LKLVQEWLLKNP L KRSKELVDI+EIRRLVITPS
Sbjct: 361  PNEVSLAALTHIHTYRHPVPDACKRLKLVQEWLLKNPRLWKRSKELVDIIEIRRLVITPS 420

Query: 421  KAYCFPPEVELSNRVLRRYKDVADRFLRVTFMDEGMKKINSHVYTYYVAPIVKEITSSSF 480
            KAYCFPPEVELSNRVLRR+KDVADRFLRVTFMDEGMKKINSHVYTYYVAPIVKEITSSSF
Sbjct: 421  KAYCFPPEVELSNRVLRRFKDVADRFLRVTFMDEGMKKINSHVYTYYVAPIVKEITSSSF 480

Query: 481  PQKTKIFARMKHILKHGFHLCGRKYSFLAYSSNQLRDQSAWFFAECKSISVDAILGWMGK 540
            PQKTKIF RMKHILKHGF+LCGRKYSFLAYSSNQLRDQSAWFF+ECK ++VD+IL WMG+
Sbjct: 481  PQKTKIFGRMKHILKHGFYLCGRKYSFLAYSSNQLRDQSAWFFSECKDVTVDSILRWMGR 540

Query: 541  FTNKNVAKCAARIGQCFSSTYATIEVPRNMVNHDLSDVERNGYVFSDGIGTITPDLAQEV 600
            FTNKNVAKCAARIGQCFSSTYATIEVPRNMVNH L DVERN Y+FSDGIGTITPDLAQEV
Sbjct: 541  FTNKNVAKCAARIGQCFSSTYATIEVPRNMVNHQLPDVERNDYIFSDGIGTITPDLAQEV 600

Query: 601  ADKLKMDGSPPCAYQIRYAGYKGVVATWPSKKDGIRLALRPSMNKFESNHRILEICSWTR 660
            ADKLK+ GSPPCAYQIRYAG KGVVA+WPSK DGIRLALRPSMNKF+S+HRILEICSWTR
Sbjct: 601  ADKLKLGGSPPCAYQIRYAGCKGVVASWPSKGDGIRLALRPSMNKFQSDHRILEICSWTR 660

Query: 661  FQPGFLNRQIITLLSTLSVPDEIFWSMQETMISKLDRMITDTDVAFEVLTASCAEQGNAA 720
            FQPGFLNRQIITLLSTL+VPDE FWSMQETM+SKLDRMITDTDVAF+VLTASCAEQGNAA
Sbjct: 661  FQPGFLNRQIITLLSTLNVPDENFWSMQETMVSKLDRMITDTDVAFDVLTASCAEQGNAA 720

Query: 721  AIMLSAGFEPRTEPHLRGMLMCIRAAQLWGLREKARIFVTEGRWCMGCFDESGVLQEGQC 780
            AIMLSAGFEP+TEPHLRGMLMCIRAAQLWGLREKARIFVT+GRWCMGCFDES VLQEGQC
Sbjct: 721  AIMLSAGFEPQTEPHLRGMLMCIRAAQLWGLREKARIFVTDGRWCMGCFDESAVLQEGQC 780

Query: 781  FIQVSTPLLEKCFSKHGSLFAETKNNLTVVRGTVVIAKNPCLHPGDVRILEAVDAPELHH 840
            FIQVSTPLLE+CFSKHGSLF ETKNNLTV+RGTVVIAKNPCLHPGDVRILEAVDAPELHH
Sbjct: 781  FIQVSTPLLERCFSKHGSLFDETKNNLTVIRGTVVIAKNPCLHPGDVRILEAVDAPELHH 840

Query: 841  LYDCLVFPRNGERPHTNEASGSDLDGDLYFTTWDGNLIPPSKKSWPPMEYAPAEVKTLQR 900
            LYDCLVFP+NGERPHTNEASGSDLDGDLYF TWD NLIPPS+KSWPPM+Y  AEVKTL R
Sbjct: 841  LYDCLVFPQNGERPHTNEASGSDLDGDLYFITWDENLIPPSRKSWPPMDYVAAEVKTLTR 900

Query: 901  KITRWDIMEFFAKNMINESLGTICNAHVVHADRSKHGALDENCIQLSELAATAVDFPKTG 960
            ++TR DIMEFFAKNMINESLGTICNAHVVHADRS++GALDENCI+LSELAATAVDFPKTG
Sbjct: 901  EVTRLDIMEFFAKNMINESLGTICNAHVVHADRSEYGALDENCIKLSELAATAVDFPKTG 960

Query: 961  KLVTMPPHLKPKLYPDFMGKEATQSYKSTKILGKMYRRIRDAYDDDDMITSRELNFTPGD 1020
            K+VTMPPHLKPKLYPDFMGK+ATQSYKSTKILG+MYRRIRD YD+D MIT+ ELNFTPGD
Sbjct: 961  KIVTMPPHLKPKLYPDFMGKQATQSYKSTKILGRMYRRIRDVYDED-MITACELNFTPGD 1020

Query: 1021 VHYDVDLEVAGAEDFIAEAWDQKCSYDGQLSGLLGQYKVNREEEIVTGHIWSMPKYVSRK 1080
            V+YDVDLEVAGA DFIAEAW+QKCSYDGQLSGLLGQYKV+REEEIVTGHIWSMPKY SRK
Sbjct: 1021 VYYDVDLEVAGAADFIAEAWNQKCSYDGQLSGLLGQYKVSREEEIVTGHIWSMPKYSSRK 1080

Query: 1081 QGELKEKLKHSYSTLKKDFRQVFENLGPEFEQLTCDERNALYEKKASAWYQVAYHPTWLK 1140
            QGELKEKLKHSYSTLKK+FRQVFEN+GPEF+QLT DERNALYE+KASAWYQVAYHPTWLK
Sbjct: 1081 QGELKEKLKHSYSTLKKEFRQVFENIGPEFDQLTDDERNALYERKASAWYQVAYHPTWLK 1140

Query: 1141 KSLELREPDAPEAVPMLSFPWIAADYLARIKIKCRRTKSFDPTKPINSLASYLSDRM 1197
            KS+ELREPD  EA PMLSFPWIAADYLARIKIKCR+ KSFDPTKPINSLASYLSDRM
Sbjct: 1141 KSMELREPDISEATPMLSFPWIAADYLARIKIKCRKMKSFDPTKPINSLASYLSDRM 1196

[Close]
BLAST of CsGy2G023250 vs. NCBI nr
Match: XP_022961927.1 (RNA-dependent RNA polymerase 6 [Cucurbita moschata])

HSP 1 Score: 2249 bits (5827), Expect = 0.0
Identity = 1083/1197 (90.48%), Postives = 1144/1197 (95.57%), Query Frame = 0 

Query: 1    MGSEEGEKIVVTQVSFGGFDSDVKARDLMSYLESEIGLVDRCRLKTSWTPPESYPDFEVS 60
            MGSEE EKIVVTQVS GGFDSDVKA+DLMSYLESEIGLVDRCRLKTSWTPPESYPDF++ 
Sbjct: 1    MGSEESEKIVVTQVSIGGFDSDVKAQDLMSYLESEIGLVDRCRLKTSWTPPESYPDFDIV 60

Query: 61   NVANVIKSDDYKKVVPHAFVHFVSPDSAAEALHAAGRGELIFNDKLLKASLGPESPFHIN 120
            NVA+V+KSDDYKKVVPHAFVHF  PDSAA ALHAAGR EL  ND+LLK SLGPESP+H+N
Sbjct: 61   NVADVVKSDDYKKVVPHAFVHFALPDSAAGALHAAGRNELFLNDRLLKVSLGPESPYHVN 120

Query: 121  QRRRTKVPFKLSDVQVDIGNLTCHDGFSVAWRGPSSGMDFLVDPFDGTCKFCFTKDTAFS 180
            QRRRTKVPFKLS+V VDIGNLTC DGFSVAWRGPSSGMDFLVDPFDGTCKFCFT+DTAFS
Sbjct: 121  QRRRTKVPFKLSNVLVDIGNLTCQDGFSVAWRGPSSGMDFLVDPFDGTCKFCFTRDTAFS 180

Query: 181  FKDNNKHTFLKCDYKMEFIVRDINQITRYTDTSCYVILLQLTSSPCIWYRTADDDIAKLV 240
            FKDNNKHT LKCDYK+EF+VRDINQI RYTD  CYVILLQLTSSPCIWYRTADDDIAK V
Sbjct: 181  FKDNNKHTVLKCDYKVEFLVRDINQIKRYTDILCYVILLQLTSSPCIWYRTADDDIAKSV 240

Query: 241  PYDLLDDDDPWIRTTDFTISGAIGRCNTFRVSVPPRYGIKLNNAMNYLKEQRVHQVSLNR 300
            PYDLLDDDDPWIRTTDFTISGAIGRCNT+RVSVPPRYGIKLNNAMNYLKEQRVHQ SL R
Sbjct: 241  PYDLLDDDDPWIRTTDFTISGAIGRCNTYRVSVPPRYGIKLNNAMNYLKEQRVHQASLKR 300

Query: 301  PPKILNEPDYGVQMTDHFFCILYKKDISFEILFLVNAVMHKGIINQHQMSDRFFDLLRNQ 360
            PPKILNEPDYGVQMTDHFFCI YK+DISFE+LFLVNAVMHKGIINQHQM+DRFFDLLRNQ
Sbjct: 301  PPKILNEPDYGVQMTDHFFCIHYKEDISFELLFLVNAVMHKGIINQHQMTDRFFDLLRNQ 360

Query: 361  PNEVNLAALSHIHAFRRPVLDACKKLKLVQEWLLKNPTLLKRSKELVDIVEIRRLVITPS 420
            PNEV+LAALSHIH +R PV DACK+LKLVQEWLLKNP L KRSKELVDI+EIRRLVITPS
Sbjct: 361  PNEVSLAALSHIHTYRHPVPDACKRLKLVQEWLLKNPRLWKRSKELVDIIEIRRLVITPS 420

Query: 421  KAYCFPPEVELSNRVLRRYKDVADRFLRVTFMDEGMKKINSHVYTYYVAPIVKEITSSSF 480
            KAYCFPPEVELSNRVLRR+KDVADRFLRVTFMDEGMKKINSHVYTYYVAPIVKEITSSSF
Sbjct: 421  KAYCFPPEVELSNRVLRRFKDVADRFLRVTFMDEGMKKINSHVYTYYVAPIVKEITSSSF 480

Query: 481  PQKTKIFARMKHILKHGFHLCGRKYSFLAYSSNQLRDQSAWFFAECKSISVDAILGWMGK 540
            PQKTK+F RMKHILKHGF+LCGRKYSFLAYSSNQLRDQSAWFF+ECK ++VD+IL WMG+
Sbjct: 481  PQKTKVFGRMKHILKHGFYLCGRKYSFLAYSSNQLRDQSAWFFSECKDVTVDSILRWMGR 540

Query: 541  FTNKNVAKCAARIGQCFSSTYATIEVPRNMVNHDLSDVERNGYVFSDGIGTITPDLAQEV 600
            FTNKNVAKCAARIGQCFSSTYATIEVPRNMVNH L DVERN Y+FSDGIGTITPDLAQEV
Sbjct: 541  FTNKNVAKCAARIGQCFSSTYATIEVPRNMVNHQLPDVERNDYIFSDGIGTITPDLAQEV 600

Query: 601  ADKLKMDGSPPCAYQIRYAGYKGVVATWPSKKDGIRLALRPSMNKFESNHRILEICSWTR 660
            ADKLK+ GSPPCAYQIRYAG KGVVA+WPSK DGIRLALRPSMNKF+S+HRILEICSWTR
Sbjct: 601  ADKLKLGGSPPCAYQIRYAGCKGVVASWPSKGDGIRLALRPSMNKFQSDHRILEICSWTR 660

Query: 661  FQPGFLNRQIITLLSTLSVPDEIFWSMQETMISKLDRMITDTDVAFEVLTASCAEQGNAA 720
            FQPGFLNRQIITLLSTL+VPDEIFWSMQETM+SKLDRMITDTDVAF+VLTASCAEQGNAA
Sbjct: 661  FQPGFLNRQIITLLSTLNVPDEIFWSMQETMVSKLDRMITDTDVAFDVLTASCAEQGNAA 720

Query: 721  AIMLSAGFEPRTEPHLRGMLMCIRAAQLWGLREKARIFVTEGRWCMGCFDESGVLQEGQC 780
            AIMLSAGFEP+TEPHLRGMLMCIRAAQLWGLREKARIFVT+GRWCMGCFDES VLQ GQC
Sbjct: 721  AIMLSAGFEPQTEPHLRGMLMCIRAAQLWGLREKARIFVTDGRWCMGCFDESAVLQGGQC 780

Query: 781  FIQVSTPLLEKCFSKHGSLFAETKNNLTVVRGTVVIAKNPCLHPGDVRILEAVDAPELHH 840
            FIQVSTPLLE+CFSKHGSLF ETKNNLTV+RGTVVIAKNPCLHPGDVRILEAVDAPELHH
Sbjct: 781  FIQVSTPLLERCFSKHGSLFDETKNNLTVIRGTVVIAKNPCLHPGDVRILEAVDAPELHH 840

Query: 841  LYDCLVFPRNGERPHTNEASGSDLDGDLYFTTWDGNLIPPSKKSWPPMEYAPAEVKTLQR 900
            LYDCLVFP+NGERPHTNEASGSDLDGDLYF TWD NLIPPS+KSWPPM Y  AEVKTL R
Sbjct: 841  LYDCLVFPQNGERPHTNEASGSDLDGDLYFITWDENLIPPSRKSWPPMNYVAAEVKTLTR 900

Query: 901  KITRWDIMEFFAKNMINESLGTICNAHVVHADRSKHGALDENCIQLSELAATAVDFPKTG 960
            ++TR DIMEFFAKNMINESLGTICNAHVVHADRS++GALDENCI+LSELAATAVDFPKTG
Sbjct: 901  EVTRLDIMEFFAKNMINESLGTICNAHVVHADRSEYGALDENCIKLSELAATAVDFPKTG 960

Query: 961  KLVTMPPHLKPKLYPDFMGKEATQSYKSTKILGKMYRRIRDAYDDDDMITSRELNFTPGD 1020
            K+VTMPPHLKPKLYPDFMGK+ATQSYKSTKILG+MYRRIRDAYD+D MIT+ ELNFTPGD
Sbjct: 961  KIVTMPPHLKPKLYPDFMGKQATQSYKSTKILGRMYRRIRDAYDED-MITACELNFTPGD 1020

Query: 1021 VHYDVDLEVAGAEDFIAEAWDQKCSYDGQLSGLLGQYKVNREEEIVTGHIWSMPKYVSRK 1080
            V+YDVDLEVAGA DFIAEAW+QKCSYDGQLSGLLGQYKV+REEEIVTGHIWSMPKY SRK
Sbjct: 1021 VYYDVDLEVAGAADFIAEAWNQKCSYDGQLSGLLGQYKVSREEEIVTGHIWSMPKYSSRK 1080

Query: 1081 QGELKEKLKHSYSTLKKDFRQVFENLGPEFEQLTCDERNALYEKKASAWYQVAYHPTWLK 1140
            QGELKEKLKHSYSTLKK+FRQVFEN+GPEFEQLT DERNALYE+KASAWYQVAYHPTWLK
Sbjct: 1081 QGELKEKLKHSYSTLKKEFRQVFENIGPEFEQLTDDERNALYERKASAWYQVAYHPTWLK 1140

Query: 1141 KSLELREPDAPEAVPMLSFPWIAADYLARIKIKCRRTKSFDPTKPINSLASYLSDRM 1197
            KS+ELREPD  EA PMLSFPWIAADYLARIKIKCR+ KSFDPTKPINSLASYLSDR+
Sbjct: 1141 KSMELREPDISEATPMLSFPWIAADYLARIKIKCRKMKSFDPTKPINSLASYLSDRI 1196

[Close]
BLAST of CsGy2G023250 vs. ExPASy TrEMBL
Match: E9NWL0 (RNA-dependent RNA polymerase OS=Cucumis sativus OX=3659 GN=Csa_2G381730 PE=2 SV=1)

HSP 1 Score: 2454 bits (6360), Expect = 0.0
Identity = 1196/1197 (99.92%), Postives = 1197/1197 (100.00%), Query Frame = 0 

Query: 1    MGSEEGEKIVVTQVSFGGFDSDVKARDLMSYLESEIGLVDRCRLKTSWTPPESYPDFEVS 60
            MGSEEGEKIVVTQVSFGGFDSDVKARDLMSYLESEIGLVDRCRLKTSWTPPESYPDFEVS
Sbjct: 1    MGSEEGEKIVVTQVSFGGFDSDVKARDLMSYLESEIGLVDRCRLKTSWTPPESYPDFEVS 60

Query: 61   NVANVIKSDDYKKVVPHAFVHFVSPDSAAEALHAAGRGELIFNDKLLKASLGPESPFHIN 120
            NVANVIKSDDYKKVVPHAFVHFVSPDSAAEALHAAGRGELIFNDKLLKASLGPESPFHIN
Sbjct: 61   NVANVIKSDDYKKVVPHAFVHFVSPDSAAEALHAAGRGELIFNDKLLKASLGPESPFHIN 120

Query: 121  QRRRTKVPFKLSDVQVDIGNLTCHDGFSVAWRGPSSGMDFLVDPFDGTCKFCFTKDTAFS 180
            QRRRTKVPFKLSDVQVDIGNLTCHDGFSVAWRGPSSGMDFLVDPFDGTCKFCFTKDTAFS
Sbjct: 121  QRRRTKVPFKLSDVQVDIGNLTCHDGFSVAWRGPSSGMDFLVDPFDGTCKFCFTKDTAFS 180

Query: 181  FKDNNKHTFLKCDYKMEFIVRDINQITRYTDTSCYVILLQLTSSPCIWYRTADDDIAKLV 240
            FKDNNKHTFLKCDYKMEFIVRDINQITRYTDTSCYVILLQLT+SPCIWYRTADDDIAKLV
Sbjct: 181  FKDNNKHTFLKCDYKMEFIVRDINQITRYTDTSCYVILLQLTASPCIWYRTADDDIAKLV 240

Query: 241  PYDLLDDDDPWIRTTDFTISGAIGRCNTFRVSVPPRYGIKLNNAMNYLKEQRVHQVSLNR 300
            PYDLLDDDDPWIRTTDFTISGAIGRCNTFRVSVPPRYGIKLNNAMNYLKEQRVHQVSLNR
Sbjct: 241  PYDLLDDDDPWIRTTDFTISGAIGRCNTFRVSVPPRYGIKLNNAMNYLKEQRVHQVSLNR 300

Query: 301  PPKILNEPDYGVQMTDHFFCILYKKDISFEILFLVNAVMHKGIINQHQMSDRFFDLLRNQ 360
            PPKILNEPDYGVQMTDHFFCILYKKDISFEILFLVNAVMHKGIINQHQMSDRFFDLLRNQ
Sbjct: 301  PPKILNEPDYGVQMTDHFFCILYKKDISFEILFLVNAVMHKGIINQHQMSDRFFDLLRNQ 360

Query: 361  PNEVNLAALSHIHAFRRPVLDACKKLKLVQEWLLKNPTLLKRSKELVDIVEIRRLVITPS 420
            PNEVNLAALSHIHAFRRPVLDACKKLKLVQEWLLKNPTLLKRSKELVDIVEIRRLVITPS
Sbjct: 361  PNEVNLAALSHIHAFRRPVLDACKKLKLVQEWLLKNPTLLKRSKELVDIVEIRRLVITPS 420

Query: 421  KAYCFPPEVELSNRVLRRYKDVADRFLRVTFMDEGMKKINSHVYTYYVAPIVKEITSSSF 480
            KAYCFPPEVELSNRVLRRYKDVADRFLRVTFMDEGMKKINSHVYTYYVAPIVKEITSSSF
Sbjct: 421  KAYCFPPEVELSNRVLRRYKDVADRFLRVTFMDEGMKKINSHVYTYYVAPIVKEITSSSF 480

Query: 481  PQKTKIFARMKHILKHGFHLCGRKYSFLAYSSNQLRDQSAWFFAECKSISVDAILGWMGK 540
            PQKTKIFARMKHILKHGFHLCGRKYSFLAYSSNQLRDQSAWFFAECKSISVDAILGWMGK
Sbjct: 481  PQKTKIFARMKHILKHGFHLCGRKYSFLAYSSNQLRDQSAWFFAECKSISVDAILGWMGK 540

Query: 541  FTNKNVAKCAARIGQCFSSTYATIEVPRNMVNHDLSDVERNGYVFSDGIGTITPDLAQEV 600
            FTNKNVAKCAARIGQCFSSTYATIEVPRNMVNHDLSDVERNGYVFSDGIGTITPDLAQEV
Sbjct: 541  FTNKNVAKCAARIGQCFSSTYATIEVPRNMVNHDLSDVERNGYVFSDGIGTITPDLAQEV 600

Query: 601  ADKLKMDGSPPCAYQIRYAGYKGVVATWPSKKDGIRLALRPSMNKFESNHRILEICSWTR 660
            ADKLKMDGSPPCAYQIRYAGYKGVVATWPSKKDGIRLALRPSMNKFESNHRILEICSWTR
Sbjct: 601  ADKLKMDGSPPCAYQIRYAGYKGVVATWPSKKDGIRLALRPSMNKFESNHRILEICSWTR 660

Query: 661  FQPGFLNRQIITLLSTLSVPDEIFWSMQETMISKLDRMITDTDVAFEVLTASCAEQGNAA 720
            FQPGFLNRQIITLLSTLSVPDEIFWSMQETMISKLDRMITDTDVAFEVLTASCAEQGNAA
Sbjct: 661  FQPGFLNRQIITLLSTLSVPDEIFWSMQETMISKLDRMITDTDVAFEVLTASCAEQGNAA 720

Query: 721  AIMLSAGFEPRTEPHLRGMLMCIRAAQLWGLREKARIFVTEGRWCMGCFDESGVLQEGQC 780
            AIMLSAGFEPRTEPHLRGMLMCIRAAQLWGLREKARIFVTEGRWCMGCFDESGVLQEGQC
Sbjct: 721  AIMLSAGFEPRTEPHLRGMLMCIRAAQLWGLREKARIFVTEGRWCMGCFDESGVLQEGQC 780

Query: 781  FIQVSTPLLEKCFSKHGSLFAETKNNLTVVRGTVVIAKNPCLHPGDVRILEAVDAPELHH 840
            FIQVSTPLLEKCFSKHGSLFAETKNNLTVVRGTVVIAKNPCLHPGDVRILEAVDAPELHH
Sbjct: 781  FIQVSTPLLEKCFSKHGSLFAETKNNLTVVRGTVVIAKNPCLHPGDVRILEAVDAPELHH 840

Query: 841  LYDCLVFPRNGERPHTNEASGSDLDGDLYFTTWDGNLIPPSKKSWPPMEYAPAEVKTLQR 900
            LYDCLVFPRNGERPHTNEASGSDLDGDLYFTTWDGNLIPPSKKSWPPMEYAPAEVKTLQR
Sbjct: 841  LYDCLVFPRNGERPHTNEASGSDLDGDLYFTTWDGNLIPPSKKSWPPMEYAPAEVKTLQR 900

Query: 901  KITRWDIMEFFAKNMINESLGTICNAHVVHADRSKHGALDENCIQLSELAATAVDFPKTG 960
            KITRWDIMEFFAKNMINESLGTICNAHVVHADRSKHGALDENCIQLSELAATAVDFPKTG
Sbjct: 901  KITRWDIMEFFAKNMINESLGTICNAHVVHADRSKHGALDENCIQLSELAATAVDFPKTG 960

Query: 961  KLVTMPPHLKPKLYPDFMGKEATQSYKSTKILGKMYRRIRDAYDDDDMITSRELNFTPGD 1020
            KLVTMPPHLKPKLYPDFMGKEATQSYKSTKILGKMYRRIRDAYDDDDMITSRELNFTPGD
Sbjct: 961  KLVTMPPHLKPKLYPDFMGKEATQSYKSTKILGKMYRRIRDAYDDDDMITSRELNFTPGD 1020

Query: 1021 VHYDVDLEVAGAEDFIAEAWDQKCSYDGQLSGLLGQYKVNREEEIVTGHIWSMPKYVSRK 1080
            VHYDVDLEVAGAEDFIAEAWDQKCSYDGQLSGLLGQYKVNREEEIVTGHIWSMPKYVSRK
Sbjct: 1021 VHYDVDLEVAGAEDFIAEAWDQKCSYDGQLSGLLGQYKVNREEEIVTGHIWSMPKYVSRK 1080

Query: 1081 QGELKEKLKHSYSTLKKDFRQVFENLGPEFEQLTCDERNALYEKKASAWYQVAYHPTWLK 1140
            QGELKEKLKHSYSTLKKDFRQVFENLGPEFEQLTCDERNALYEKKASAWYQVAYHPTWLK
Sbjct: 1081 QGELKEKLKHSYSTLKKDFRQVFENLGPEFEQLTCDERNALYEKKASAWYQVAYHPTWLK 1140

Query: 1141 KSLELREPDAPEAVPMLSFPWIAADYLARIKIKCRRTKSFDPTKPINSLASYLSDRM 1197
            KSLELREPDAPEAVPMLSFPWIAADYLARIKIKCRRTKSFDPTKPINSLASYLSDRM
Sbjct: 1141 KSLELREPDAPEAVPMLSFPWIAADYLARIKIKCRRTKSFDPTKPINSLASYLSDRM 1197

[Close]
BLAST of CsGy2G023250 vs. ExPASy TrEMBL
Match: A0A1S4DVP7 (RNA-dependent RNA polymerase OS=Cucumis melo OX=3656 GN=LOC103488305 PE=3 SV=1)

HSP 1 Score: 2392 bits (6199), Expect = 0.0
Identity = 1163/1197 (97.16%), Postives = 1182/1197 (98.75%), Query Frame = 0 

Query: 1    MGSEEGEKIVVTQVSFGGFDSDVKARDLMSYLESEIGLVDRCRLKTSWTPPESYPDFEVS 60
            MGSEE EKIVVTQVSFGGFDSDVKARDLMSYLESEIGLVDRCRLKTSWTPPESYPDFEVS
Sbjct: 1    MGSEESEKIVVTQVSFGGFDSDVKARDLMSYLESEIGLVDRCRLKTSWTPPESYPDFEVS 60

Query: 61   NVANVIKSDDYKKVVPHAFVHFVSPDSAAEALHAAGRGELIFNDKLLKASLGPESPFHIN 120
            NVANVIKSDDYKKVVPHAFVHFVSPDSAAEALHAAGRGEL+FN KLLKASLGPESPFHIN
Sbjct: 61   NVANVIKSDDYKKVVPHAFVHFVSPDSAAEALHAAGRGELLFNGKLLKASLGPESPFHIN 120

Query: 121  QRRRTKVPFKLSDVQVDIGNLTCHDGFSVAWRGPSSGMDFLVDPFDGTCKFCFTKDTAFS 180
            QRRRTKVPFKLSDVQVDIGNLTCHDGFSVAWRGPSSGMDFLVDPFDGTCKFCFTKDTAFS
Sbjct: 121  QRRRTKVPFKLSDVQVDIGNLTCHDGFSVAWRGPSSGMDFLVDPFDGTCKFCFTKDTAFS 180

Query: 181  FKDNNKHTFLKCDYKMEFIVRDINQITRYTDTSCYVILLQLTSSPCIWYRTADDDIAKLV 240
            FKDNNK+T LKCDYK+EFIVRDINQI RYTDTSCYVILLQLTSSPCIWYRTADDDIAK V
Sbjct: 181  FKDNNKYTVLKCDYKLEFIVRDINQIKRYTDTSCYVILLQLTSSPCIWYRTADDDIAKSV 240

Query: 241  PYDLLDDDDPWIRTTDFTISGAIGRCNTFRVSVPPRYGIKLNNAMNYLKEQRVHQVSLNR 300
            PYDLLDDDDPWIRTTDFTISGAIGRCNTFRVSVPPRYGIKLNNAMNYLKEQRVHQVSLNR
Sbjct: 241  PYDLLDDDDPWIRTTDFTISGAIGRCNTFRVSVPPRYGIKLNNAMNYLKEQRVHQVSLNR 300

Query: 301  PPKILNEPDYGVQMTDHFFCILYKKDISFEILFLVNAVMHKGIINQHQMSDRFFDLLRNQ 360
            PPKILNEPDYGVQMTDHFFCI YK+DISFEILFLVNAVMHKGIINQHQMSDRFFDLLRNQ
Sbjct: 301  PPKILNEPDYGVQMTDHFFCIFYKEDISFEILFLVNAVMHKGIINQHQMSDRFFDLLRNQ 360

Query: 361  PNEVNLAALSHIHAFRRPVLDACKKLKLVQEWLLKNPTLLKRSKELVDIVEIRRLVITPS 420
            PNEVNLAALSHIH++RRPVLDACKKLKLVQEWLLKNPTL KRSKELVDIVEIRRLVITPS
Sbjct: 361  PNEVNLAALSHIHSYRRPVLDACKKLKLVQEWLLKNPTLWKRSKELVDIVEIRRLVITPS 420

Query: 421  KAYCFPPEVELSNRVLRRYKDVADRFLRVTFMDEGMKKINSHVYTYYVAPIVKEITSSSF 480
            KAYCFPPEVELSNRVLRRYKDVADRFLRVTFMDEGMKKINSHVYTYYVAPIVKEITSSSF
Sbjct: 421  KAYCFPPEVELSNRVLRRYKDVADRFLRVTFMDEGMKKINSHVYTYYVAPIVKEITSSSF 480

Query: 481  PQKTKIFARMKHILKHGFHLCGRKYSFLAYSSNQLRDQSAWFFAECKSISVDAILGWMGK 540
            PQKTKIFARMKHILKHGFHLCGRKYSFLAYSSNQLRDQSAWFFAECK+ISVD ILGWMGK
Sbjct: 481  PQKTKIFARMKHILKHGFHLCGRKYSFLAYSSNQLRDQSAWFFAECKNISVDGILGWMGK 540

Query: 541  FTNKNVAKCAARIGQCFSSTYATIEVPRNMVNHDLSDVERNGYVFSDGIGTITPDLAQEV 600
            FTNKNVAKCAARIGQCFSSTYATIEVPRNMVNH+L DVERNGYVFSDGIGTITPDLAQEV
Sbjct: 541  FTNKNVAKCAARIGQCFSSTYATIEVPRNMVNHNLQDVERNGYVFSDGIGTITPDLAQEV 600

Query: 601  ADKLKMDGSPPCAYQIRYAGYKGVVATWPSKKDGIRLALRPSMNKFESNHRILEICSWTR 660
            ADKLKMDGS PCAYQIRYAGYKGVVATWPSK+DGIRLALRPSMNKFES+HRILEICSWTR
Sbjct: 601  ADKLKMDGSLPCAYQIRYAGYKGVVATWPSKEDGIRLALRPSMNKFESDHRILEICSWTR 660

Query: 661  FQPGFLNRQIITLLSTLSVPDEIFWSMQETMISKLDRMITDTDVAFEVLTASCAEQGNAA 720
            FQPGFLNRQIITLLSTLSVPDEIFWSMQETMISKLDRMITDTDVAFEVLTASCAEQGNAA
Sbjct: 661  FQPGFLNRQIITLLSTLSVPDEIFWSMQETMISKLDRMITDTDVAFEVLTASCAEQGNAA 720

Query: 721  AIMLSAGFEPRTEPHLRGMLMCIRAAQLWGLREKARIFVTEGRWCMGCFDESGVLQEGQC 780
            AIMLSAGFEPRTEPHLRGMLMCIRAAQLWGLREKARIFVTEGRWCMGCFDESGVLQEGQC
Sbjct: 721  AIMLSAGFEPRTEPHLRGMLMCIRAAQLWGLREKARIFVTEGRWCMGCFDESGVLQEGQC 780

Query: 781  FIQVSTPLLEKCFSKHGSLFAETKNNLTVVRGTVVIAKNPCLHPGDVRILEAVDAPELHH 840
            FIQVSTPLLEKCFSKHGSLFAETKNNLTVVRGTVVIAKNPCLHPGDVRILEAVDAPELHH
Sbjct: 781  FIQVSTPLLEKCFSKHGSLFAETKNNLTVVRGTVVIAKNPCLHPGDVRILEAVDAPELHH 840

Query: 841  LYDCLVFPRNGERPHTNEASGSDLDGDLYFTTWDGNLIPPSKKSWPPMEYAPAEVKTLQR 900
            LYDCLVFP+NGERPHTNEASGSDLDGDLYFTTWD NLIPPSKKSWPPMEYAPA+VKTLQR
Sbjct: 841  LYDCLVFPQNGERPHTNEASGSDLDGDLYFTTWDENLIPPSKKSWPPMEYAPADVKTLQR 900

Query: 901  KITRWDIMEFFAKNMINESLGTICNAHVVHADRSKHGALDENCIQLSELAATAVDFPKTG 960
            KITR DIMEFFAKNMINESLGTICNAHVVHADRSK+GALDENCIQLSELAATAVDFPKTG
Sbjct: 901  KITRLDIMEFFAKNMINESLGTICNAHVVHADRSKYGALDENCIQLSELAATAVDFPKTG 960

Query: 961  KLVTMPPHLKPKLYPDFMGKEATQSYKSTKILGKMYRRIRDAYDDDDMITSRELNFTPGD 1020
            K+VTMPPHLKPKLYPDFMGKEATQSYKSTKILGKMYRRIRDAYDDDDMITSRELNFTPGD
Sbjct: 961  KIVTMPPHLKPKLYPDFMGKEATQSYKSTKILGKMYRRIRDAYDDDDMITSRELNFTPGD 1020

Query: 1021 VHYDVDLEVAGAEDFIAEAWDQKCSYDGQLSGLLGQYKVNREEEIVTGHIWSMPKYVSRK 1080
            VHYDVDLEVAGAEDFIAEAW+QKCSYDGQLSGLLGQYKVNREEEIVTGHIWSMPKYVSRK
Sbjct: 1021 VHYDVDLEVAGAEDFIAEAWNQKCSYDGQLSGLLGQYKVNREEEIVTGHIWSMPKYVSRK 1080

Query: 1081 QGELKEKLKHSYSTLKKDFRQVFENLGPEFEQLTCDERNALYEKKASAWYQVAYHPTWLK 1140
            QGELKEKLKHSYSTLKKDFRQVFEN+GPEFEQLTCDERNA YEKKASAWYQVAYHPTWLK
Sbjct: 1081 QGELKEKLKHSYSTLKKDFRQVFENIGPEFEQLTCDERNAFYEKKASAWYQVAYHPTWLK 1140

Query: 1141 KSLELREPDAPEAVPMLSFPWIAADYLARIKIKCRRTKSFDPTKPINSLASYLSDRM 1197
            KSLELREPDAPEA+PMLSFPWIAADYLARIKIKCRR KSFDPTKPINSL SYLS+R+
Sbjct: 1141 KSLELREPDAPEAIPMLSFPWIAADYLARIKIKCRRMKSFDPTKPINSLVSYLSERI 1197

[Close]
BLAST of CsGy2G023250 vs. ExPASy TrEMBL
Match: A0A5A7VD22 (RNA-dependent RNA polymerase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold82G002450 PE=3 SV=1)

HSP 1 Score: 2392 bits (6199), Expect = 0.0
Identity = 1163/1197 (97.16%), Postives = 1182/1197 (98.75%), Query Frame = 0 

Query: 1    MGSEEGEKIVVTQVSFGGFDSDVKARDLMSYLESEIGLVDRCRLKTSWTPPESYPDFEVS 60
            MGSEE EKIVVTQVSFGGFDSDVKARDLMSYLESEIGLVDRCRLKTSWTPPESYPDFEVS
Sbjct: 1    MGSEESEKIVVTQVSFGGFDSDVKARDLMSYLESEIGLVDRCRLKTSWTPPESYPDFEVS 60

Query: 61   NVANVIKSDDYKKVVPHAFVHFVSPDSAAEALHAAGRGELIFNDKLLKASLGPESPFHIN 120
            NVANVIKSDDYKKVVPHAFVHFVSPDSAAEALHAAGRGEL+FN KLLKASLGPESPFHIN
Sbjct: 61   NVANVIKSDDYKKVVPHAFVHFVSPDSAAEALHAAGRGELLFNGKLLKASLGPESPFHIN 120

Query: 121  QRRRTKVPFKLSDVQVDIGNLTCHDGFSVAWRGPSSGMDFLVDPFDGTCKFCFTKDTAFS 180
            QRRRTKVPFKLSDVQVDIGNLTCHDGFSVAWRGPSSGMDFLVDPFDGTCKFCFTKDTAFS
Sbjct: 121  QRRRTKVPFKLSDVQVDIGNLTCHDGFSVAWRGPSSGMDFLVDPFDGTCKFCFTKDTAFS 180

Query: 181  FKDNNKHTFLKCDYKMEFIVRDINQITRYTDTSCYVILLQLTSSPCIWYRTADDDIAKLV 240
            FKDNNK+T LKCDYK+EFIVRDINQI RYTDTSCYVILLQLTSSPCIWYRTADDDIAK V
Sbjct: 181  FKDNNKYTVLKCDYKLEFIVRDINQIKRYTDTSCYVILLQLTSSPCIWYRTADDDIAKSV 240

Query: 241  PYDLLDDDDPWIRTTDFTISGAIGRCNTFRVSVPPRYGIKLNNAMNYLKEQRVHQVSLNR 300
            PYDLLDDDDPWIRTTDFTISGAIGRCNTFRVSVPPRYGIKLNNAMNYLKEQRVHQVSLNR
Sbjct: 241  PYDLLDDDDPWIRTTDFTISGAIGRCNTFRVSVPPRYGIKLNNAMNYLKEQRVHQVSLNR 300

Query: 301  PPKILNEPDYGVQMTDHFFCILYKKDISFEILFLVNAVMHKGIINQHQMSDRFFDLLRNQ 360
            PPKILNEPDYGVQMTDHFFCI YK+DISFEILFLVNAVMHKGIINQHQMSDRFFDLLRNQ
Sbjct: 301  PPKILNEPDYGVQMTDHFFCIFYKEDISFEILFLVNAVMHKGIINQHQMSDRFFDLLRNQ 360

Query: 361  PNEVNLAALSHIHAFRRPVLDACKKLKLVQEWLLKNPTLLKRSKELVDIVEIRRLVITPS 420
            PNEVNLAALSHIH++RRPVLDACKKLKLVQEWLLKNPTL KRSKELVDIVEIRRLVITPS
Sbjct: 361  PNEVNLAALSHIHSYRRPVLDACKKLKLVQEWLLKNPTLWKRSKELVDIVEIRRLVITPS 420

Query: 421  KAYCFPPEVELSNRVLRRYKDVADRFLRVTFMDEGMKKINSHVYTYYVAPIVKEITSSSF 480
            KAYCFPPEVELSNRVLRRYKDVADRFLRVTFMDEGMKKINSHVYTYYVAPIVKEITSSSF
Sbjct: 421  KAYCFPPEVELSNRVLRRYKDVADRFLRVTFMDEGMKKINSHVYTYYVAPIVKEITSSSF 480

Query: 481  PQKTKIFARMKHILKHGFHLCGRKYSFLAYSSNQLRDQSAWFFAECKSISVDAILGWMGK 540
            PQKTKIFARMKHILKHGFHLCGRKYSFLAYSSNQLRDQSAWFFAECK+ISVD ILGWMGK
Sbjct: 481  PQKTKIFARMKHILKHGFHLCGRKYSFLAYSSNQLRDQSAWFFAECKNISVDGILGWMGK 540

Query: 541  FTNKNVAKCAARIGQCFSSTYATIEVPRNMVNHDLSDVERNGYVFSDGIGTITPDLAQEV 600
            FTNKNVAKCAARIGQCFSSTYATIEVPRNMVNH+L DVERNGYVFSDGIGTITPDLAQEV
Sbjct: 541  FTNKNVAKCAARIGQCFSSTYATIEVPRNMVNHNLQDVERNGYVFSDGIGTITPDLAQEV 600

Query: 601  ADKLKMDGSPPCAYQIRYAGYKGVVATWPSKKDGIRLALRPSMNKFESNHRILEICSWTR 660
            ADKLKMDGS PCAYQIRYAGYKGVVATWPSK+DGIRLALRPSMNKFES+HRILEICSWTR
Sbjct: 601  ADKLKMDGSLPCAYQIRYAGYKGVVATWPSKEDGIRLALRPSMNKFESDHRILEICSWTR 660

Query: 661  FQPGFLNRQIITLLSTLSVPDEIFWSMQETMISKLDRMITDTDVAFEVLTASCAEQGNAA 720
            FQPGFLNRQIITLLSTLSVPDEIFWSMQETMISKLDRMITDTDVAFEVLTASCAEQGNAA
Sbjct: 661  FQPGFLNRQIITLLSTLSVPDEIFWSMQETMISKLDRMITDTDVAFEVLTASCAEQGNAA 720

Query: 721  AIMLSAGFEPRTEPHLRGMLMCIRAAQLWGLREKARIFVTEGRWCMGCFDESGVLQEGQC 780
            AIMLSAGFEPRTEPHLRGMLMCIRAAQLWGLREKARIFVTEGRWCMGCFDESGVLQEGQC
Sbjct: 721  AIMLSAGFEPRTEPHLRGMLMCIRAAQLWGLREKARIFVTEGRWCMGCFDESGVLQEGQC 780

Query: 781  FIQVSTPLLEKCFSKHGSLFAETKNNLTVVRGTVVIAKNPCLHPGDVRILEAVDAPELHH 840
            FIQVSTPLLEKCFSKHGSLFAETKNNLTVVRGTVVIAKNPCLHPGDVRILEAVDAPELHH
Sbjct: 781  FIQVSTPLLEKCFSKHGSLFAETKNNLTVVRGTVVIAKNPCLHPGDVRILEAVDAPELHH 840

Query: 841  LYDCLVFPRNGERPHTNEASGSDLDGDLYFTTWDGNLIPPSKKSWPPMEYAPAEVKTLQR 900
            LYDCLVFP+NGERPHTNEASGSDLDGDLYFTTWD NLIPPSKKSWPPMEYAPA+VKTLQR
Sbjct: 841  LYDCLVFPQNGERPHTNEASGSDLDGDLYFTTWDENLIPPSKKSWPPMEYAPADVKTLQR 900

Query: 901  KITRWDIMEFFAKNMINESLGTICNAHVVHADRSKHGALDENCIQLSELAATAVDFPKTG 960
            KITR DIMEFFAKNMINESLGTICNAHVVHADRSK+GALDENCIQLSELAATAVDFPKTG
Sbjct: 901  KITRLDIMEFFAKNMINESLGTICNAHVVHADRSKYGALDENCIQLSELAATAVDFPKTG 960

Query: 961  KLVTMPPHLKPKLYPDFMGKEATQSYKSTKILGKMYRRIRDAYDDDDMITSRELNFTPGD 1020
            K+VTMPPHLKPKLYPDFMGKEATQSYKSTKILGKMYRRIRDAYDDDDMITSRELNFTPGD
Sbjct: 961  KIVTMPPHLKPKLYPDFMGKEATQSYKSTKILGKMYRRIRDAYDDDDMITSRELNFTPGD 1020

Query: 1021 VHYDVDLEVAGAEDFIAEAWDQKCSYDGQLSGLLGQYKVNREEEIVTGHIWSMPKYVSRK 1080
            VHYDVDLEVAGAEDFIAEAW+QKCSYDGQLSGLLGQYKVNREEEIVTGHIWSMPKYVSRK
Sbjct: 1021 VHYDVDLEVAGAEDFIAEAWNQKCSYDGQLSGLLGQYKVNREEEIVTGHIWSMPKYVSRK 1080

Query: 1081 QGELKEKLKHSYSTLKKDFRQVFENLGPEFEQLTCDERNALYEKKASAWYQVAYHPTWLK 1140
            QGELKEKLKHSYSTLKKDFRQVFEN+GPEFEQLTCDERNA YEKKASAWYQVAYHPTWLK
Sbjct: 1081 QGELKEKLKHSYSTLKKDFRQVFENIGPEFEQLTCDERNAFYEKKASAWYQVAYHPTWLK 1140

Query: 1141 KSLELREPDAPEAVPMLSFPWIAADYLARIKIKCRRTKSFDPTKPINSLASYLSDRM 1197
            KSLELREPDAPEA+PMLSFPWIAADYLARIKIKCRR KSFDPTKPINSL SYLS+R+
Sbjct: 1141 KSLELREPDAPEAIPMLSFPWIAADYLARIKIKCRRMKSFDPTKPINSLVSYLSERI 1197

[Close]
BLAST of CsGy2G023250 vs. ExPASy TrEMBL
Match: A0A6J1HBE9 (RNA-dependent RNA polymerase OS=Cucurbita moschata OX=3662 GN=LOC111462552 PE=3 SV=1)

HSP 1 Score: 2249 bits (5827), Expect = 0.0
Identity = 1083/1197 (90.48%), Postives = 1144/1197 (95.57%), Query Frame = 0 

Query: 1    MGSEEGEKIVVTQVSFGGFDSDVKARDLMSYLESEIGLVDRCRLKTSWTPPESYPDFEVS 60
            MGSEE EKIVVTQVS GGFDSDVKA+DLMSYLESEIGLVDRCRLKTSWTPPESYPDF++ 
Sbjct: 1    MGSEESEKIVVTQVSIGGFDSDVKAQDLMSYLESEIGLVDRCRLKTSWTPPESYPDFDIV 60

Query: 61   NVANVIKSDDYKKVVPHAFVHFVSPDSAAEALHAAGRGELIFNDKLLKASLGPESPFHIN 120
            NVA+V+KSDDYKKVVPHAFVHF  PDSAA ALHAAGR EL  ND+LLK SLGPESP+H+N
Sbjct: 61   NVADVVKSDDYKKVVPHAFVHFALPDSAAGALHAAGRNELFLNDRLLKVSLGPESPYHVN 120

Query: 121  QRRRTKVPFKLSDVQVDIGNLTCHDGFSVAWRGPSSGMDFLVDPFDGTCKFCFTKDTAFS 180
            QRRRTKVPFKLS+V VDIGNLTC DGFSVAWRGPSSGMDFLVDPFDGTCKFCFT+DTAFS
Sbjct: 121  QRRRTKVPFKLSNVLVDIGNLTCQDGFSVAWRGPSSGMDFLVDPFDGTCKFCFTRDTAFS 180

Query: 181  FKDNNKHTFLKCDYKMEFIVRDINQITRYTDTSCYVILLQLTSSPCIWYRTADDDIAKLV 240
            FKDNNKHT LKCDYK+EF+VRDINQI RYTD  CYVILLQLTSSPCIWYRTADDDIAK V
Sbjct: 181  FKDNNKHTVLKCDYKVEFLVRDINQIKRYTDILCYVILLQLTSSPCIWYRTADDDIAKSV 240

Query: 241  PYDLLDDDDPWIRTTDFTISGAIGRCNTFRVSVPPRYGIKLNNAMNYLKEQRVHQVSLNR 300
            PYDLLDDDDPWIRTTDFTISGAIGRCNT+RVSVPPRYGIKLNNAMNYLKEQRVHQ SL R
Sbjct: 241  PYDLLDDDDPWIRTTDFTISGAIGRCNTYRVSVPPRYGIKLNNAMNYLKEQRVHQASLKR 300

Query: 301  PPKILNEPDYGVQMTDHFFCILYKKDISFEILFLVNAVMHKGIINQHQMSDRFFDLLRNQ 360
            PPKILNEPDYGVQMTDHFFCI YK+DISFE+LFLVNAVMHKGIINQHQM+DRFFDLLRNQ
Sbjct: 301  PPKILNEPDYGVQMTDHFFCIHYKEDISFELLFLVNAVMHKGIINQHQMTDRFFDLLRNQ 360

Query: 361  PNEVNLAALSHIHAFRRPVLDACKKLKLVQEWLLKNPTLLKRSKELVDIVEIRRLVITPS 420
            PNEV+LAALSHIH +R PV DACK+LKLVQEWLLKNP L KRSKELVDI+EIRRLVITPS
Sbjct: 361  PNEVSLAALSHIHTYRHPVPDACKRLKLVQEWLLKNPRLWKRSKELVDIIEIRRLVITPS 420

Query: 421  KAYCFPPEVELSNRVLRRYKDVADRFLRVTFMDEGMKKINSHVYTYYVAPIVKEITSSSF 480
            KAYCFPPEVELSNRVLRR+KDVADRFLRVTFMDEGMKKINSHVYTYYVAPIVKEITSSSF
Sbjct: 421  KAYCFPPEVELSNRVLRRFKDVADRFLRVTFMDEGMKKINSHVYTYYVAPIVKEITSSSF 480

Query: 481  PQKTKIFARMKHILKHGFHLCGRKYSFLAYSSNQLRDQSAWFFAECKSISVDAILGWMGK 540
            PQKTK+F RMKHILKHGF+LCGRKYSFLAYSSNQLRDQSAWFF+ECK ++VD+IL WMG+
Sbjct: 481  PQKTKVFGRMKHILKHGFYLCGRKYSFLAYSSNQLRDQSAWFFSECKDVTVDSILRWMGR 540

Query: 541  FTNKNVAKCAARIGQCFSSTYATIEVPRNMVNHDLSDVERNGYVFSDGIGTITPDLAQEV 600
            FTNKNVAKCAARIGQCFSSTYATIEVPRNMVNH L DVERN Y+FSDGIGTITPDLAQEV
Sbjct: 541  FTNKNVAKCAARIGQCFSSTYATIEVPRNMVNHQLPDVERNDYIFSDGIGTITPDLAQEV 600

Query: 601  ADKLKMDGSPPCAYQIRYAGYKGVVATWPSKKDGIRLALRPSMNKFESNHRILEICSWTR 660
            ADKLK+ GSPPCAYQIRYAG KGVVA+WPSK DGIRLALRPSMNKF+S+HRILEICSWTR
Sbjct: 601  ADKLKLGGSPPCAYQIRYAGCKGVVASWPSKGDGIRLALRPSMNKFQSDHRILEICSWTR 660

Query: 661  FQPGFLNRQIITLLSTLSVPDEIFWSMQETMISKLDRMITDTDVAFEVLTASCAEQGNAA 720
            FQPGFLNRQIITLLSTL+VPDEIFWSMQETM+SKLDRMITDTDVAF+VLTASCAEQGNAA
Sbjct: 661  FQPGFLNRQIITLLSTLNVPDEIFWSMQETMVSKLDRMITDTDVAFDVLTASCAEQGNAA 720

Query: 721  AIMLSAGFEPRTEPHLRGMLMCIRAAQLWGLREKARIFVTEGRWCMGCFDESGVLQEGQC 780
            AIMLSAGFEP+TEPHLRGMLMCIRAAQLWGLREKARIFVT+GRWCMGCFDES VLQ GQC
Sbjct: 721  AIMLSAGFEPQTEPHLRGMLMCIRAAQLWGLREKARIFVTDGRWCMGCFDESAVLQGGQC 780

Query: 781  FIQVSTPLLEKCFSKHGSLFAETKNNLTVVRGTVVIAKNPCLHPGDVRILEAVDAPELHH 840
            FIQVSTPLLE+CFSKHGSLF ETKNNLTV+RGTVVIAKNPCLHPGDVRILEAVDAPELHH
Sbjct: 781  FIQVSTPLLERCFSKHGSLFDETKNNLTVIRGTVVIAKNPCLHPGDVRILEAVDAPELHH 840

Query: 841  LYDCLVFPRNGERPHTNEASGSDLDGDLYFTTWDGNLIPPSKKSWPPMEYAPAEVKTLQR 900
            LYDCLVFP+NGERPHTNEASGSDLDGDLYF TWD NLIPPS+KSWPPM Y  AEVKTL R
Sbjct: 841  LYDCLVFPQNGERPHTNEASGSDLDGDLYFITWDENLIPPSRKSWPPMNYVAAEVKTLTR 900

Query: 901  KITRWDIMEFFAKNMINESLGTICNAHVVHADRSKHGALDENCIQLSELAATAVDFPKTG 960
            ++TR DIMEFFAKNMINESLGTICNAHVVHADRS++GALDENCI+LSELAATAVDFPKTG
Sbjct: 901  EVTRLDIMEFFAKNMINESLGTICNAHVVHADRSEYGALDENCIKLSELAATAVDFPKTG 960

Query: 961  KLVTMPPHLKPKLYPDFMGKEATQSYKSTKILGKMYRRIRDAYDDDDMITSRELNFTPGD 1020
            K+VTMPPHLKPKLYPDFMGK+ATQSYKSTKILG+MYRRIRDAYD+D MIT+ ELNFTPGD
Sbjct: 961  KIVTMPPHLKPKLYPDFMGKQATQSYKSTKILGRMYRRIRDAYDED-MITACELNFTPGD 1020

Query: 1021 VHYDVDLEVAGAEDFIAEAWDQKCSYDGQLSGLLGQYKVNREEEIVTGHIWSMPKYVSRK 1080
            V+YDVDLEVAGA DFIAEAW+QKCSYDGQLSGLLGQYKV+REEEIVTGHIWSMPKY SRK
Sbjct: 1021 VYYDVDLEVAGAADFIAEAWNQKCSYDGQLSGLLGQYKVSREEEIVTGHIWSMPKYSSRK 1080

Query: 1081 QGELKEKLKHSYSTLKKDFRQVFENLGPEFEQLTCDERNALYEKKASAWYQVAYHPTWLK 1140
            QGELKEKLKHSYSTLKK+FRQVFEN+GPEFEQLT DERNALYE+KASAWYQVAYHPTWLK
Sbjct: 1081 QGELKEKLKHSYSTLKKEFRQVFENIGPEFEQLTDDERNALYERKASAWYQVAYHPTWLK 1140

Query: 1141 KSLELREPDAPEAVPMLSFPWIAADYLARIKIKCRRTKSFDPTKPINSLASYLSDRM 1197
            KS+ELREPD  EA PMLSFPWIAADYLARIKIKCR+ KSFDPTKPINSLASYLSDR+
Sbjct: 1141 KSMELREPDISEATPMLSFPWIAADYLARIKIKCRKMKSFDPTKPINSLASYLSDRI 1196

[Close]
BLAST of CsGy2G023250 vs. ExPASy TrEMBL
Match: A0A6J1K8Y0 (RNA-dependent RNA polymerase OS=Cucurbita maxima OX=3661 GN=LOC111491746 PE=3 SV=1)

HSP 1 Score: 2236 bits (5795), Expect = 0.0
Identity = 1077/1197 (89.97%), Postives = 1140/1197 (95.24%), Query Frame = 0 

Query: 1    MGSEEGEKIVVTQVSFGGFDSDVKARDLMSYLESEIGLVDRCRLKTSWTPPESYPDFEVS 60
            MGSEE EKIVVTQVS GGFDSDVKA+DLMSYLESEIGLVDRCRLKTSWTPPESYPDF++ 
Sbjct: 1    MGSEESEKIVVTQVSIGGFDSDVKAQDLMSYLESEIGLVDRCRLKTSWTPPESYPDFDIV 60

Query: 61   NVANVIKSDDYKKVVPHAFVHFVSPDSAAEALHAAGRGELIFNDKLLKASLGPESPFHIN 120
            NVA+VIKSDDYKKVVPHAFVHF  PDSAA ALHAAGR EL  ND+LLK SLGPESP+H+N
Sbjct: 61   NVADVIKSDDYKKVVPHAFVHFALPDSAAGALHAAGRNELFLNDRLLKVSLGPESPYHVN 120

Query: 121  QRRRTKVPFKLSDVQVDIGNLTCHDGFSVAWRGPSSGMDFLVDPFDGTCKFCFTKDTAFS 180
            QRRRTKVPFKLS+V VDIGNLTC DGFSVAWRGPSSGMDFLVDPFDGTCKFCFT+DTAFS
Sbjct: 121  QRRRTKVPFKLSNVLVDIGNLTCQDGFSVAWRGPSSGMDFLVDPFDGTCKFCFTRDTAFS 180

Query: 181  FKDNNKHTFLKCDYKMEFIVRDINQITRYTDTSCYVILLQLTSSPCIWYRTADDDIAKLV 240
            FKDNNKHT LKCDYK+EF+VRDINQI RYTD SCYVILLQLTSSPCIWYRTADDDIAK V
Sbjct: 181  FKDNNKHTVLKCDYKVEFLVRDINQIKRYTDISCYVILLQLTSSPCIWYRTADDDIAKSV 240

Query: 241  PYDLLDDDDPWIRTTDFTISGAIGRCNTFRVSVPPRYGIKLNNAMNYLKEQRVHQVSLNR 300
            PYDLLDDDDPWIRTTDFTISGAIGRCNT+RVSVPPRYGIKLNNAMNYLKEQRVHQ SL R
Sbjct: 241  PYDLLDDDDPWIRTTDFTISGAIGRCNTYRVSVPPRYGIKLNNAMNYLKEQRVHQASLKR 300

Query: 301  PPKILNEPDYGVQMTDHFFCILYKKDISFEILFLVNAVMHKGIINQHQMSDRFFDLLRNQ 360
            PPKILNEPDYGVQ+TDHFFCI YK+DISFE+LFLVNAVMHKGIINQHQM+DRFFDLLRNQ
Sbjct: 301  PPKILNEPDYGVQITDHFFCIHYKEDISFELLFLVNAVMHKGIINQHQMTDRFFDLLRNQ 360

Query: 361  PNEVNLAALSHIHAFRRPVLDACKKLKLVQEWLLKNPTLLKRSKELVDIVEIRRLVITPS 420
            PNEV+LAALSHIH +R PV DACK+LK VQEWLLKNP L KRSKELVDI+EIRRLVITPS
Sbjct: 361  PNEVSLAALSHIHTYRHPVPDACKRLKHVQEWLLKNPRLWKRSKELVDIIEIRRLVITPS 420

Query: 421  KAYCFPPEVELSNRVLRRYKDVADRFLRVTFMDEGMKKINSHVYTYYVAPIVKEITSSSF 480
            KAYCFPPEVELSNRVLRR+KDVADRFLRVTFMDEGMKKINSHVYTYYVAPIVKEITSSSF
Sbjct: 421  KAYCFPPEVELSNRVLRRFKDVADRFLRVTFMDEGMKKINSHVYTYYVAPIVKEITSSSF 480

Query: 481  PQKTKIFARMKHILKHGFHLCGRKYSFLAYSSNQLRDQSAWFFAECKSISVDAILGWMGK 540
            PQKTKIF RMKHILKHGF+LCGRKYSFLAYSSNQLRDQSAWFF+ECK ++VD+IL WMG+
Sbjct: 481  PQKTKIFGRMKHILKHGFYLCGRKYSFLAYSSNQLRDQSAWFFSECKDVTVDSILRWMGR 540

Query: 541  FTNKNVAKCAARIGQCFSSTYATIEVPRNMVNHDLSDVERNGYVFSDGIGTITPDLAQEV 600
            FTNKNVAKCAARIGQCFSSTYATIEVPRNMV+H L DVERN Y+FSDGIGTITPDLAQEV
Sbjct: 541  FTNKNVAKCAARIGQCFSSTYATIEVPRNMVDHQLPDVERNDYIFSDGIGTITPDLAQEV 600

Query: 601  ADKLKMDGSPPCAYQIRYAGYKGVVATWPSKKDGIRLALRPSMNKFESNHRILEICSWTR 660
            ADKLK+ GSPPCAYQIRYAG KGVVA+WPSK DGIRLALRPSMNKF+S+HRILEICSWTR
Sbjct: 601  ADKLKLGGSPPCAYQIRYAGCKGVVASWPSKGDGIRLALRPSMNKFQSDHRILEICSWTR 660

Query: 661  FQPGFLNRQIITLLSTLSVPDEIFWSMQETMISKLDRMITDTDVAFEVLTASCAEQGNAA 720
            FQPGFLNRQIITLLSTL+VPDE FWSMQETM+SKLDRMITDT+VAF+VLTASCAEQGNAA
Sbjct: 661  FQPGFLNRQIITLLSTLNVPDENFWSMQETMVSKLDRMITDTNVAFDVLTASCAEQGNAA 720

Query: 721  AIMLSAGFEPRTEPHLRGMLMCIRAAQLWGLREKARIFVTEGRWCMGCFDESGVLQEGQC 780
            AIMLSAGFEP+TEPHLRGMLMCIRAAQLWGLREKARIFVT+GRWCMGCFDES VLQEGQC
Sbjct: 721  AIMLSAGFEPQTEPHLRGMLMCIRAAQLWGLREKARIFVTDGRWCMGCFDESAVLQEGQC 780

Query: 781  FIQVSTPLLEKCFSKHGSLFAETKNNLTVVRGTVVIAKNPCLHPGDVRILEAVDAPELHH 840
            FIQVSTPLLE+CFSKHGSLF ETKNNLTV+RGTVVIAKNPCLHPGDVRILEAVDAPELHH
Sbjct: 781  FIQVSTPLLERCFSKHGSLFDETKNNLTVIRGTVVIAKNPCLHPGDVRILEAVDAPELHH 840

Query: 841  LYDCLVFPRNGERPHTNEASGSDLDGDLYFTTWDGNLIPPSKKSWPPMEYAPAEVKTLQR 900
            LYDCLVFP+NGERPHTNEASGSDLDGDLYF TWD NLIPPS+KSWPPM Y  AEVKTL R
Sbjct: 841  LYDCLVFPQNGERPHTNEASGSDLDGDLYFITWDENLIPPSRKSWPPMNYVAAEVKTLTR 900

Query: 901  KITRWDIMEFFAKNMINESLGTICNAHVVHADRSKHGALDENCIQLSELAATAVDFPKTG 960
            ++TR DIMEFFAKNMINESLGTICNAHVVHADRS++GALDENCI+LSELAATAVDFPKTG
Sbjct: 901  EVTRLDIMEFFAKNMINESLGTICNAHVVHADRSEYGALDENCIKLSELAATAVDFPKTG 960

Query: 961  KLVTMPPHLKPKLYPDFMGKEATQSYKSTKILGKMYRRIRDAYDDDDMITSRELNFTPGD 1020
            K+VTMPPHLKPKLYPDFMGK+ATQSYKSTKILG+MYRRIRD YD+D MIT+ ELNFTPGD
Sbjct: 961  KIVTMPPHLKPKLYPDFMGKQATQSYKSTKILGRMYRRIRDVYDED-MITACELNFTPGD 1020

Query: 1021 VHYDVDLEVAGAEDFIAEAWDQKCSYDGQLSGLLGQYKVNREEEIVTGHIWSMPKYVSRK 1080
            V+YDVDLEVAGA DFIAEAW+QKCSYDGQLSGLLGQYKV+REEEIVTGHIWSMPKY SRK
Sbjct: 1021 VYYDVDLEVAGAADFIAEAWNQKCSYDGQLSGLLGQYKVSREEEIVTGHIWSMPKYSSRK 1080

Query: 1081 QGELKEKLKHSYSTLKKDFRQVFENLGPEFEQLTCDERNALYEKKASAWYQVAYHPTWLK 1140
            QGELKEKLKHSY+TLKK+FRQVFEN+GPEFEQLT DERNALYE+KASAWYQV YHPTWLK
Sbjct: 1081 QGELKEKLKHSYTTLKKEFRQVFENIGPEFEQLTDDERNALYERKASAWYQVTYHPTWLK 1140

Query: 1141 KSLELREPDAPEAVPMLSFPWIAADYLARIKIKCRRTKSFDPTKPINSLASYLSDRM 1197
            KS+ELREPD  EA PMLSFPW+A DYLARIKIKCR+ KS DPTKPINSLASYLSDRM
Sbjct: 1141 KSMELREPDIAEATPMLSFPWVAVDYLARIKIKCRKMKSVDPTKPINSLASYLSDRM 1196

[Close]
BLAST of CsGy2G023250 vs. TAIR 10
Match: AT3G49500.1 (RNA-dependent RNA polymerase 6 )

HSP 1 Score: 1659.8 bits (4297), Expect = 0.0e+00
Identity = 792/1199 (66.06%), Postives = 956/1199 (79.73%), Query Frame = 0 

Query: 1    MGSEEG-EKIVVTQVSFGGFDSDVKARDLMSYLESEIGLVDRCRLKTSWTPPESYPDFEV 60
            MGSE   +K VVTQVS GGF     A+ L  YLE E+G+V RCRLKTSWTPP SYP+FE+
Sbjct: 1    MGSEGNMKKSVVTQVSIGGFGESTTAKQLTDYLEDEVGIVWRCRLKTSWTPPGSYPNFEI 60

Query: 61   SNVANVIKSDDYKKVVPHAFVHFVSPDSAAEALHAAGRGELIFNDKLLKASLGPESPFHI 120
            ++ +N+   D+YKKV PHAFVHF   +SA  A+ AAG+  LI + + LK SLGP++P+ +
Sbjct: 61   ADTSNIPSIDEYKKVEPHAFVHFAVFESAGRAMDAAGQCNLILDGQPLKVSLGPKNPYSL 120

Query: 121  NQRRRTKVPFKLSDVQVDIGNLTCHDGFSVAWRGPSSGMDFLVDPFDGTCKFCFTKDTAF 180
            NQRRRT VP+KL+ + ++IG L   D F V+WR  + G+DFLVDPFD TCKFCF K TAF
Sbjct: 121  NQRRRTTVPYKLAGITLEIGTLVSRDDFFVSWR--AEGVDFLVDPFDNTCKFCFRKSTAF 180

Query: 181  SFKDNNKHTFLKCDYKMEFIVRDINQITRYTDTSCYVILLQLTSSPCIWYRTADDDIAKL 240
            SFKD   H  + CDYK+E +VRDI  + +Y     +V++LQL SSP +WYRTADDDI   
Sbjct: 181  SFKDAVMHAVINCDYKLELLVRDIQTVRQYKTLHGFVLILQLASSPRVWYRTADDDIYDT 240

Query: 241  VPYDLLDDDDPWIRTTDFTISGAIGRCNTFRVSVPPRYGIKLNNAMNYLKEQRVHQVSLN 300
            VP DLLDDDDPWIRTTDFT  GAIGRC+++RV + PRY  KL  A++Y + +RV +  + 
Sbjct: 241  VPGDLLDDDDPWIRTTDFTQVGAIGRCHSYRVLISPRYENKLRTALDYFRMRRVQEERVR 300

Query: 301  RPPKILNEPDYGVQMTDHFFCILYKKDISFEILFLVNAVMHKGIINQHQMSDRFFDLLRN 360
             PP+I NEP +G  ++DHFFCI +K+ ISFEI+FLVN+V+H+G+ NQ Q+++RFFDLLRN
Sbjct: 301  WPPRIRNEPCFGEPVSDHFFCIHHKEGISFEIMFLVNSVLHRGVFNQFQLTERFFDLLRN 360

Query: 361  QPNEVNLAALSHIHAFRRPVLDACKKLKLVQEWLLKNPTLLKRSKELVDIVEIRRLVITP 420
            QP +VN+A+L H+  ++RPV DA K+LKLVQEW+ KNP LL   ++  DI EIRRLVITP
Sbjct: 361  QPKDVNIASLKHLCTYKRPVFDAYKRLKLVQEWIQKNPKLLGSHEQSEDISEIRRLVITP 420

Query: 421  SKAYCFPPEVELSNRVLRRYKDVADRFLRVTFMDEGMKKINSHVYTYYVAPIVKEITSSS 480
            ++AYC PPEVELSNRVLRRYK VA+RFLRVTFMDE M+ INS+V +Y+VAPIVK++TSSS
Sbjct: 421  TRAYCLPPEVELSNRVLRRYKAVAERFLRVTFMDESMQTINSNVLSYFVAPIVKDLTSSS 480

Query: 481  FPQKTKIFARMKHILKHGFHLCGRKYSFLAYSSNQLRDQSAWFFAECKSISVDAILGWMG 540
            F QKT +F R+K IL  GF LCGRKYSFLA+S+NQLRD+SAWFFAE     V  I  WMG
Sbjct: 481  FSQKTYVFKRVKSILTDGFKLCGRKYSFLAFSANQLRDRSAWFFAEDGKTRVSDIKTWMG 540

Query: 541  KFTNKNVAKCAARIGQCFSSTYATIEVPRNMVNHDLSDVERNGYVFSDGIGTITPDLAQE 600
            KF +KNVAKCAAR+G CFSSTYAT++V  + V+ ++ D+ERNGYVFSDGIGTITPDLA E
Sbjct: 541  KFKDKNVAKCAARMGLCFSSTYATVDVMPHEVDTEVPDIERNGYVFSDGIGTITPDLADE 600

Query: 601  VADKLKMD-GSPPCAYQIRYAGYKGVVATWPSKKDGIRLALRPSMNKFESNHRILEICSW 660
            V +KLK+D    PCAYQIRYAG+KGVVA WPSK DGIRLALR SM KF S H ILEICSW
Sbjct: 601  VMEKLKLDVHYSPCAYQIRYAGFKGVVARWPSKSDGIRLALRDSMKKFFSKHTILEICSW 660

Query: 661  TRFQPGFLNRQIITLLSTLSVPDEIFWSMQETMISKLDRMITDTDVAFEVLTASCAEQGN 720
            TRFQPGFLNRQIITLLS L VPDEIFW MQE+M+ KL+R++ DTDVAFEVLTASCAEQGN
Sbjct: 661  TRFQPGFLNRQIITLLSVLGVPDEIFWDMQESMLYKLNRILDDTDVAFEVLTASCAEQGN 720

Query: 721  AAAIMLSAGFEPRTEPHLRGMLMCIRAAQLWGLREKARIFVTEGRWCMGCFDESGVLQEG 780
             AAIMLSAGF+P+TEPHLRGML  +R AQLWGLREK+RIFVT GRW MGC DE+G+L+ G
Sbjct: 721  TAAIMLSAGFKPKTEPHLRGMLSSVRIAQLWGLREKSRIFVTSGRWLMGCLDEAGILEHG 780

Query: 781  QCFIQVSTPLLEKCFSKHGSLFAETKNNLTVVRGTVVIAKNPCLHPGDVRILEAVDAPEL 840
            QCFIQVS P +E CFSKHGS F ETK +L VV+G V IAKNPCLHPGDVRILEAVD P+L
Sbjct: 781  QCFIQVSKPSIENCFSKHGSRFKETKTDLEVVKGYVAIAKNPCLHPGDVRILEAVDVPQL 840

Query: 841  HHLYDCLVFPRNGERPHTNEASGSDLDGDLYFTTWDGNLIPPSKKSWPPMEYAPAEVKTL 900
            HH+YDCL+FP+ G+RPHTNEASGSDLDGDLYF  WD  LIPP++KS+P M Y  AE K+L
Sbjct: 841  HHMYDCLIFPQKGDRPHTNEASGSDLDGDLYFVAWDQKLIPPNRKSYPAMHYDAAEEKSL 900

Query: 901  QRKITRWDIMEFFAKNMINESLGTICNAHVVHADRSKHGALDENCIQLSELAATAVDFPK 960
             R +   DI++FFA+N+ NE LGTICNAHVVHADRS++GA+DE C+ L+ELAATAVDFPK
Sbjct: 901  GRAVNHQDIIDFFARNLANEQLGTICNAHVVHADRSEYGAMDEECLLLAELAATAVDFPK 960

Query: 961  TGKLVTMPPHLKPKLYPDFMGKEATQSYKSTKILGKMYRRIRDAYDDDDMITSRELNFTP 1020
            TGK+V+MP HLKPKLYPDFMGKE  Q+YKS KILG++YRR+++ YD+D   +S E +  P
Sbjct: 961  TGKIVSMPFHLKPKLYPDFMGKEDYQTYKSNKILGRLYRRVKEVYDEDAEASSEE-STDP 1020

Query: 1021 GDVHYDVDLEVAGAEDFIAEAWDQKCSYDGQLSGLLGQYKVNREEEIVTGHIWSMPKYVS 1080
              + YD  LE+ G ED I EAW  KC YDGQL GLLGQYKV +EEEIVTGHIWSMPKY S
Sbjct: 1021 SAIPYDAVLEIPGFEDLIPEAWGHKCLYDGQLIGLLGQYKVQKEEEIVTGHIWSMPKYTS 1080

Query: 1081 RKQGELKEKLKHSYSTLKKDFRQVFENLGPEFEQLTCDERNALYEKKASAWYQVAYHPTW 1140
            +KQGELKE+LKHSY++LKK+FR+VFE   P+ E L+ +E+N LYEKKASAWY V YHP W
Sbjct: 1081 KKQGELKERLKHSYNSLKKEFRKVFEETIPDHENLSEEEKNILYEKKASAWYHVTYHPEW 1140

Query: 1141 LKKSLELREPDAPEAVPMLSFPWIAADYLARIKIKCRRTKSFDPTKPINSLASYLSDRM 1198
            +KKSLEL++PD      MLSF WIAADYLARIKI+ R   S D  KP++SLA +L+ R+
Sbjct: 1141 VKKSLELQDPDESSHAAMLSFAWIAADYLARIKIRSREMGSIDSAKPVDSLAKFLAQRL 1196

[Close]
BLAST of CsGy2G023250 vs. TAIR 10
Match: AT1G14790.1 (RNA-dependent RNA polymerase 1 )

HSP 1 Score: 571.2 bits (1471), Expect = 1.9e-162
Identity = 355/1000 (35.50%), Postives = 540/1000 (54.00%), Query Frame = 0 

Query: 193  DYKMEFIVRDINQITRYT--DTSCYVILLQLTSSPCIWYRTADDDIAKLVPYDLLD---- 252
            DY++E    +I QI  ++    S   +++Q+  +P I+ +  +D    L+ + ++D    
Sbjct: 143  DYRLELSYENIWQIDLHSPQGRSSKFLVIQVIGAPKIFEK--EDQPINLL-FGIMDFYSD 202

Query: 253  -DDDPWIRTTDFTISGAIGRCNTFRVSVPPRYGIK--LNNAMNYLKEQRVHQVSLNRPPK 312
              D+ WIRTTDFT S  IG+   F + +P    +     N  NY  E R     +     
Sbjct: 203  GSDEQWIRTTDFTSSSCIGQSTAFCLELPVHLNVPDFRENFANY-AEHRASSFLIESGSS 262

Query: 313  ILNEPDYGVQMTDHFFCILYKKDISFEILFLVNAVMHKGIINQHQMSDRFFDLLRNQPNE 372
              +  +  V + D          + FEILF +N ++    ++   +   F+ LL  +  +
Sbjct: 263  YSSNANTLVPVVDP----PPGFSLPFEILFKLNTLVQNACLSGPALDLDFYRLLNQK--K 322

Query: 373  VNLAALSHIHAFRRPVLDACKK-----LKLVQEWLLKNPTLLKRSKELVD-IVEIRRLVI 432
             + A + H       + + C +         ++W+ K    L  +  L D +V + R+ +
Sbjct: 323  YDRALIDHCLEKLFHLGECCYEPAHWLRDEYKKWISKGKLPLSPTISLDDGLVYMYRVQV 382

Query: 433  TPSKAYCFPPEVELSNRVLRRYKDVADRFLRVTFMDEGMKKINSHVYTYYVAPIVKEITS 492
            TP++ Y   PEV +SNRVLR Y    + FLRV+F+DE ++K+ S          +     
Sbjct: 383  TPARVYFSGPEVNVSNRVLRHYSKYINNFLRVSFVDEDLEKVRS----------MDLSPR 442

Query: 493  SSFPQKTKIFARMKHILKHGFHLCGRKYSFLAYSSNQLRDQSAWFFAECKSISVDAILGW 552
            SS  ++TK++ R+  +L+ G  +  +K+ FLA+SS+QLR+ SAW FA    I+   I  W
Sbjct: 443  SSTQRRTKLYDRIYSVLRDGIVIGDKKFEFLAFSSSQLRENSAWMFAPIDRITAAHIRAW 502

Query: 553  MGKFTN-KNVAKCAARIGQCFSSTYATIEVPRNMVNHDLSDVE----RNGYVFSDGIGTI 612
            MG F + +NVAK AAR+GQ FSS+  T+ V  + +   + DVE       YVFSDGIG I
Sbjct: 503  MGDFDHIRNVAKYAARLGQSFSSSRETLNVRSDEI-EVIPDVEIISLGTRYVFSDGIGKI 562

Query: 613  TPDLAQEVADKLKMDGSPPCAYQIRYAGYKGVVATWPSKKDGIRLALRPSMNKFESNHRI 672
            + + A++VA K  +    P A+QIRY GYKGVVA  P+     +L+LR SM+KFES +  
Sbjct: 563  SAEFARKVARKCGLTEFSPSAFQIRYGGYKGVVAVDPNSSK--KLSLRKSMSKFESENTK 622

Query: 673  LEICSWTRFQPGFLNRQIITLLSTLSVPDEIFWSMQETMISKLDRMITDTDVAFEVL-TA 732
            L++ +W+++QP ++NRQ+ITLLSTL V D +F   Q  ++ +LD ++T    A E L   
Sbjct: 623  LDVLAWSKYQPCYMNRQLITLLSTLGVTDSVFEKKQREVVDRLDAILTHPLEAHEALGLM 682

Query: 733  SCAEQGNAAAIMLSAGFEPRTEPHLRGMLMCIRAAQLWGLREKARIFVTEGRWCMGCFDE 792
            +  E  N    ++  G++P  EP L  ML   RA++L  LR K RIF++ GR  MGC DE
Sbjct: 683  APGENTNILKALILCGYKPDAEPFLSMMLQNFRASKLLELRTKTRIFISGGRSMMGCLDE 742

Query: 793  SGVLQEGQCFIQVSTPLLEKCFSKHGSLFAETKNNLTVVRGTVVIAKNPCLHPGDVRILE 852
            +  L+ GQ  +Q S P+      + G  F        ++ G VV+AKNPCLHPGDVR+L+
Sbjct: 743  TRTLEYGQVVVQYSDPM------RPGRRF--------IITGPVVVAKNPCLHPGDVRVLQ 802

Query: 853  AVDAPELHHLYDCLVFPRNGERPHTNEASGSDLDGDLYFTTWDGNLIPPSKKSWPPMEYA 912
            AV+ P L+H+ DC+VFP+ G RPH NE SGSDLDGD+YF  WD  L+PP  ++  PM+Y 
Sbjct: 803  AVNVPALNHMVDCVVFPQKGLRPHPNECSGSDLDGDIYFVCWDQELVPP--RTSEPMDYT 862

Query: 913  PAEVKTLQRKITRWDIMEFFAKNMINESLGTICNAHVVHADRSKHGALDENCIQLSELAA 972
            P   + L   +T  ++ E+FA  ++N+SLG I NAH   AD+    A  + CI+L++  +
Sbjct: 863  PEPTQILDHDVTIEEVEEYFANYIVNDSLGIIANAHTAFADKEPLKAFSDPCIELAKKFS 922

Query: 973  TAVDFPKTGKLVTMPPHLKPKLYPDFMGKEATQSYKSTKILGKMYRRIRDAYDDDDMITS 1032
            TAVDFPKTG    +P HL  K YPDFM K    +Y+S  ++GK++R +++      +I+ 
Sbjct: 923  TAVDFPKTGVAAVIPQHLYVKEYPDFMEKPDKPTYESKNVIGKLFREVKER--APPLISI 982

Query: 1033 RELNFTPGDVHYDVDLEVAGAEDFIAEAWDQKCSYDGQLSGLLGQYKVNREEEIVTGHIW 1092
            +          YD D+EV G E+++ EA+ QK +YD +L  L+  Y +  E EI++G I 
Sbjct: 983  KSFTLDVASKSYDKDMEVDGFEEYVDEAFYQKANYDFKLGNLMDYYGIKTEAEILSGGIM 1042

Query: 1093 SMPKYVSRKQGELKEKLKHSYSTLKKDFRQVFENLGPEFEQLTCDERNALYEKKASAWYQ 1152
             M K  ++++    E +  +   L+K+   +F             E       KASAWY 
Sbjct: 1043 RMSKSFTKRRD--AESIGRAVRALRKETLSLF----------NASEEEENESAKASAWYH 1084

Query: 1153 VAYHPTWLKKSLELREPDAPEAVPMLSFPWIAADYLARIK 1172
            V YH ++     E    D       LSF W   D L RIK
Sbjct: 1103 VTYHSSYWGLYNEGLNRD-----HFLSFAWCVYDKLVRIK 1084

[Close]
BLAST of CsGy2G023250 vs. TAIR 10
Match: AT4G11130.1 (RNA-dependent RNA polymerase 2 )

HSP 1 Score: 516.2 bits (1328), Expect = 7.3e-146
Identity = 347/1051 (33.02%), Postives = 532/1051 (50.62%), Query Frame = 0 

Query: 162  VDPFDGTCKFCFTKDTAFSFKDNNKHTFLKCDYKMEFIVRDINQITRYTDTSCYVILLQL 221
            ++ +DG   +  T+     F         K + + E I+  ++       +     LL+L
Sbjct: 126  LEKWDGVRCWILTEKRRVEFWVWESGDCYKIEVRFEDIIETLSCCVNGDASEIDAFLLKL 185

Query: 222  TSSPCIWYRTADDDIAKL----VPYDLLDDDDPWIRTTDFTISGAIGRCNTFRVSVPPRY 281
               P ++ R       K       +   D D  WIRTTDF+ S +IG    F + V    
Sbjct: 186  KYGPKVFKRVTVHIATKFKSDRYRFCKEDFDFMWIRTTDFSGSKSIGTSTCFCLEV--HN 245

Query: 282  GIKLNNAMNYLKEQRVHQVSLNRPPKILNEPDY--GVQMTDHFFCILYKKDISFEILFLV 341
            G  + +  + L   R   +SL      ++   +    Q+       +   +  +EILF +
Sbjct: 246  GSTMLDIFSGLPYYREDTLSLT----YVDGKTFASAAQIVPLLNAAILGLEFPYEILFQL 305

Query: 342  NAVMHKGIINQHQMSD-RFFDLLRNQPNEVNLAALSHIHAFRR----PVLDACKKLKLVQ 401
            NA++H   I+    SD     +LR    E  L  L  +H        PV     +++ V 
Sbjct: 306  NALVHAQKISLFAASDMELIKILRGMSLETALVILKKLHQQSSICYDPVFFVKTQMQSVV 365

Query: 402  EWLLKNPTLLKRSKELVDIVEIRRLVITPSKAYCFPPEVELSNRVLRRYKDVADRFLRVT 461
            + +  +P    +     +I+  +R  +TPSK Y   PE+E +N V++ + +    F+RVT
Sbjct: 366  KKMKHSPASAYKRLTEQNIMSCQRAYVTPSKIYLLGPELETANYVVKNFAEHVSDFMRVT 425

Query: 462  FMDEGMKKINSHVYT------YYVAPIVKEITSSSFPQKTKIFARMKHILKHGFHLCGRK 521
            F++E   K+ ++  +      Y+V            P +T I+ R+  IL  G  +  ++
Sbjct: 426  FVEEDWSKLPANALSVNSKEGYFVK-----------PSRTNIYNRVLSILGEGITVGPKR 485

Query: 522  YSFLAYSSNQLRDQSAWFFAECKSISVDAILGWMGKFTN-KNVAKCAARIGQCFSSTYAT 581
            + FLA+S++QLR  S W FA  + +  + I  WMG F   ++++KCAAR+GQ FS++  T
Sbjct: 486  FEFLAFSASQLRGNSVWMFASNEKVKAEDIREWMGCFRKIRSISKCAARMGQLFSASRQT 545

Query: 582  IEVPRNMVNHDLSDVERN----GYVFSDGIGTITPDLAQEVADKLKMDGSPPCAYQIRYA 641
            + V    V   + D+E       Y FSDGIG I+   A++VA K  +    P A+QIRY 
Sbjct: 546  LIVRAQDV-EQIPDIEVTTDGADYCFSDGIGKISLAFAKQVAQKCGL-SHVPSAFQIRYG 605

Query: 642  GYKGVVATWPSKKDGIRLALRPSMNKFESNHRILEICSWTRFQPGFLNRQIITLLSTLSV 701
            GYKGV+A    +    +L+LR SM KF+SN+R+L +  WT   P FLNR+II LLSTL +
Sbjct: 606  GYKGVIAV--DRSSFRKLSLRDSMLKFDSNNRMLNVTRWTESMPCFLNREIICLLSTLGI 665

Query: 702  PDEIFWSMQETMISKLDRMITDTDVAFEVLTASCAEQG-NAAAIMLSAGFEPRTEPHLRG 761
             D +F +MQ   +S L  M+ D D A  VL     E   N    ML  G+ P +EP+L  
Sbjct: 666  EDAMFEAMQAVHLSMLGNMLEDRDAALNVLQKLSGENSKNLLVKMLLQGYAPSSEPYLSM 725

Query: 762  MLMCIRAAQLWGLREKARIFVTEGRWCMGCFDESGVLQEGQCFIQVSTPLLEKCFSKHGS 821
            ML     +QL  L+ + RI V +GR  +GC DE G+L+ GQ +++V+    E   S+  S
Sbjct: 726  MLRVHHESQLSELKSRCRILVPKGRILIGCMDEMGILEYGQVYVRVTLTKAE-LKSRDQS 785

Query: 822  LFAETKNNLTVVRGTVVIAKNPCLHPGDVRILEAVDAPELHH----LYDCLVFPRNGERP 881
             F +     +VV G VV+ KNPCLHPGD+R+L+A+   E+H       DC++FP+ GERP
Sbjct: 786  YFRKIDEETSVVIGKVVVTKNPCLHPGDIRVLDAI--YEVHFEEKGYLDCIIFPQKGERP 845

Query: 882  HTNEASGSDLDGDLYFTTWDGNLIPPSKKSWPPMEYAPAEVKTLQRKITRWDIMEFFAKN 941
            H NE SG DLDGD +F +WD  +IP      PPM+YA +  + +   +T  +I +FF   
Sbjct: 846  HPNECSGGDLDGDQFFVSWDEKIIPSEMD--PPMDYAGSRPRLMDHDVTLEEIHKFFVDY 905

Query: 942  MINESLGTICNAHVVHADRSKHGALDENCIQLSELAATAVDFPKTGKLVTMPPHLKPKLY 1001
            MI+++LG I  AH+VHADR    A  + C++L+ L + AVDF KTG    MP  LKP+ +
Sbjct: 906  MISDTLGVISTAHLVHADRDPEKARSQKCLELANLHSRAVDFAKTGAPAEMPYALKPREF 965

Query: 1002 PDFMGKEATQSYKSTKILGKMYRRIRDAYDDDDMITSRELNFTPGD-VHYDVDLEVAGAE 1061
            PDF+ +    +Y S  + GK+YR ++ +      +  R+      D V YDV LE AG E
Sbjct: 966  PDFLERFEKPTYISESVFGKLYRAVKSS------LAQRKPEAESEDTVAYDVTLEEAGFE 1025

Query: 1062 DFIAEAWDQKCSYDGQLSGLLGQYKVNREEEIVTGHIWSMPKYV---SRKQGELKEKLKH 1121
             FI  A   +  Y  +L+ L+  Y    EEEI+TG + +   Y+   +R+ G++K+++  
Sbjct: 1026 SFIETAKAHRDMYGEKLTSLMIYYGAANEEEILTGILKTKEMYLARDNRRYGDMKDRITL 1085

Query: 1122 SYSTLKKDFRQVFENLGPEFEQLTCDERNALYEKKASAWYQVAYHPTWLKKSLELREPDA 1181
            S   L K+    FE         +C++     +K ASAWY V Y+P              
Sbjct: 1086 SVKDLHKEAMGWFEK--------SCEDEQQ-KKKLASAWYYVTYNPN-----------HR 1124

[Close]
BLAST of CsGy2G023250 vs. TAIR 10
Match: AT2G05370.1 (BEST Arabidopsis thaliana protein match is: RNA-dependent RNA polymerase 6 (TAIR:AT3G49500.1); Has 65 Blast hits to 37 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 65; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 167.5 bits (423), Expect = 6.3e-41
Identity = 104/289 (35.99%), Postives = 140/289 (48.44%), Query Frame = 0 

Query: 7   EKIVVTQVSFGGFDSDVKARDLMSYLESEIG-LVDRCRLKTSWTPPESYPDFEVSNVANV 66
           + +VV+QV+  GF    K ++L  YLE+++G LV RCRLKTSWTP  SYP+FE+ + +N+
Sbjct: 2   KNLVVSQVTISGFGESTKTKELTDYLENKVGLLVWRCRLKTSWTPHGSYPNFEIIDTSNI 61

Query: 67  IKSDDYKKVVPHAFVHFVSPDSAAEALHAAGRGELIFNDKLLKASLGPESPFHINQRRRT 126
            K D Y++VVPHAFVH    D+    + AA + +LI   + LK SL  E+P+ +N     
Sbjct: 62  PKFDCYERVVPHAFVHC---DAHKSLMDAAEQSKLILGGQPLKFSLSSENPYTLN----- 121

Query: 127 KVPFKLSDVQVDIGNLTCHDGFSVAWRGPSSGMDFLVDPFDGTCKFCFTKDTAFSFKDNN 186
             P+KL+ V ++IG                                              
Sbjct: 122 --PYKLTGVSLEIGT--------------------------------------------- 181

Query: 187 KHTFLKCDYKMEFIVRDINQITRYTDTSCYVILLQLTSSPCIWYRTADDDIAKLVPYDLL 246
                                              L SSP +WYRTADDDI +    DLL
Sbjct: 182 -----------------------------------LASSPRVWYRTADDDIYETSAVDLL 200

Query: 247 DDDDPWIRTTDFTISGAIGRCNTFRVSVPPRYGIKLNNAMNYLKEQRVH 295
           DD+DPWIRTTDFT SGAI RC  +RV + PR   K    ++YLK QRV+
Sbjct: 242 DDNDPWIRTTDFTQSGAIRRCLGYRVFISPRDHNKWTKVLDYLKTQRVN 200

[Close]
BLAST of CsGy2G023250 vs. TAIR 10
Match: AT2G05370.2 (FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: RNA-dependent RNA polymerase 6 (TAIR:AT3G49500.1); Has 31 Blast hits to 31 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 31; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 116.3 bits (290), Expect = 1.7e-25
Identity = 61/142 (42.96%), Postives = 91/142 (64.08%), Query Frame = 0 

Query: 7   EKIVVTQVSFGGFDSDVKARDLMSYLESEIG-LVDRCRLKTSWTPPESYPDFEVSNVANV 66
           + +VV+QV+  GF    K ++L  YLE+++G LV RCRLKTSWTP  SYP+FE+ + +N+
Sbjct: 8   KNLVVSQVTISGFGESTKTKELTDYLENKVGLLVWRCRLKTSWTPHGSYPNFEIIDTSNI 67

Query: 67  IKSDDYKKVVPHAFVHFVSPDSAAEALHAAGRGELIFNDKLLKASLGPESPFHINQRRRT 126
            K D Y++VVPHAFVH    D+    + AA + +LI   + LK SL  E+P+ +N     
Sbjct: 68  PKFDCYERVVPHAFVHC---DAHKSLMDAAEQSKLILGGQPLKFSLSSENPYTLN----- 127

Query: 127 KVPFKLSDVQVDIGNLTCHDGF 148
             P+KL+ V ++IG ++  D F
Sbjct: 128 --PYKLTGVSLEIGTVSQDDFF 139

The following BLAST results are available for this feature:
BLAST of CsGy2G023250 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q9SG020.0e+0066.06RNA-dependent RNA polymerase 6 OS=Arabidopsis thaliana OX=3702 GN=RDR6 PE=1 SV=1[more]
Q8LHH90.0e+0057.33Probable RNA-dependent RNA polymerase SHL2 OS=Oryza sativa subsp. japonica OX=39... [more]
Q9LQV22.7e-16135.50RNA-dependent RNA polymerase 1 OS=Arabidopsis thaliana OX=3702 GN=RDR1 PE=2 SV=1[more]
Q7XM311.4e-15735.65Probable RNA-dependent RNA polymerase 2 OS=Oryza sativa subsp. japonica OX=39947... [more]
Q0DXS37.8e-15340.26Probable RNA-dependent RNA polymerase 1 OS=Oryza sativa subsp. japonica OX=39947... [more]
BLAST of CsGy2G023250 vs. NCBI nr
Match NameE-valueIdentityDescription
NP_001267634.10.099.92RNA-dependent RNA polymerase 6-like [Cucumis sativus] >XP_011648568.1 RNA-depend... [more]
XP_008445204.10.097.16PREDICTED: RNA-dependent RNA polymerase 6 [Cucumis melo] >XP_016900057.1 PREDICT... [more]
XP_038885332.10.092.56RNA-dependent RNA polymerase 6 [Benincasa hispida] >XP_038885333.1 RNA-dependent... [more]
KAG7029509.10.090.56RNA-dependent RNA polymerase 6, partial [Cucurbita argyrosperma subsp. argyrospe... [more]
XP_022961927.10.090.48RNA-dependent RNA polymerase 6 [Cucurbita moschata][more]
BLAST of CsGy2G023250 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
E9NWL00.099.92RNA-dependent RNA polymerase OS=Cucumis sativus OX=3659 GN=Csa_2G381730 PE=2 SV=... [more]
A0A1S4DVP70.097.16RNA-dependent RNA polymerase OS=Cucumis melo OX=3656 GN=LOC103488305 PE=3 SV=1[more]
A0A5A7VD220.097.16RNA-dependent RNA polymerase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_sca... [more]
A0A6J1HBE90.090.48RNA-dependent RNA polymerase OS=Cucurbita moschata OX=3662 GN=LOC111462552 PE=3 ... [more]
A0A6J1K8Y00.089.97RNA-dependent RNA polymerase OS=Cucurbita maxima OX=3661 GN=LOC111491746 PE=3 SV... [more]
BLAST of CsGy2G023250 vs. TAIR 10
Match NameE-valueIdentityDescription
AT3G49500.10.0e+0066.06RNA-dependent RNA polymerase 6 [more]
AT1G14790.11.9e-16235.50RNA-dependent RNA polymerase 1 [more]
AT4G11130.17.3e-14633.02RNA-dependent RNA polymerase 2 [more]
AT2G05370.16.3e-4135.99BEST Arabidopsis thaliana protein match is: RNA-dependent RNA polymerase 6 (TAIR... [more]
AT2G05370.21.7e-2542.96FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknow... [more]
InterPro
Analysis Name: InterPro Annotations of Cucumber (Gy14) v2.1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR007855RNA-dependent RNA polymerase, eukaryotic-typePFAMPF05183RdRPcoord: 417..999
e-value: 1.2E-181
score: 605.3
IPR007855RNA-dependent RNA polymerase, eukaryotic-typePANTHERPTHR23079RNA-DEPENDENT RNA POLYMERASEcoord: 7..1197
NoneNo IPR availablePANTHERPTHR23079:SF18RNA-DEPENDENT RNA POLYMERASE 6coord: 7..1197
NoneNo IPR availableCDDcd00590RRM_SFcoord: 14..110
e-value: 0.00277175
score: 35.7437

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsGy2G023250.1CsGy2G023250.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0010492 maintenance of shoot apical meristem identity
biological_process GO:0070919 production of siRNA involved in gene silencing by small RNA
biological_process GO:0030422 production of siRNA involved in RNA interference
biological_process GO:0001172 transcription, RNA-templated
cellular_component GO:0031380 nuclear RNA-directed RNA polymerase complex
molecular_function GO:0003723 RNA binding
molecular_function GO:0003968 RNA-directed 5'-3' RNA polymerase activity