CsGy2G017855 (gene) Cucumber (Gy14) v2.1

Overview
NameCsGy2G017855
Typegene
OrganismCucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
DescriptionUnknown protein
LocationGy14Chr2: 27738617 .. 27739256 (-)
RNA-Seq ExpressionCsGy2G017855
SyntenyCsGy2G017855
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTTTGCCATTTTGCTTCTCTTCGTGTGGAATAGGTTTCAGCTGGCTCGTGTAGGAAGGAACCGTGGATGTTGCAGGGGAGCCACAGATTGTTCCTGTTTCCTTATATCCTTTGAAACTCATTGGCTTTTTCAATATTATGTACTTAATATTCTTGGTTGTGTTCAATTGGTTTGTGGTTTTTTTTTTTGTTCATCCATGGTTTTATTTGCAGGCATGTTCAGAGAAAGGAAACCTGCGAGAAGATTCAGTCATATTCTTATTTCTTTACCATTAACGTAAGACTAATTATTCCATTCATTAATTGGAACCCAATAACTGTTATTCATTTGAAATGTACGAGTCTGCCAAATCTTTTCCCTTAAAGTATGTTTGATGCTCACTACTTTTTGTGGAGGATAACAAAACGCAGCTATATCATAACTCAGGGAATAGATTCCTGATAAAATTGTATTAGATCTTGAAAGGCTATTGGTCCTTGGTTGATAGTTCTTGTTTGAGCTTAATGATGTTAAGCTCAGCTATGTAAAATGGAACAAACACAAGTTTAGAAATTCAGGCTTCATTAACTGAGTAGAATTCTTTTATGATTTTCTGTACTGTTGGTTGATGGATATCCTTTGGTGGCAGAAGAAGATAA

mRNA sequence

ATGTTTGCCATTTTGCTTCTCTTCGTGTGGAATAGGTTTCAGCTGGCTCGTGTAGGAAGGAACCGTGGATGTTGCAGGGGAGCCACAGATTGTTCCTGTTTCCTTATATCCTTTGAAACTCATTGGCTTTTTCAATATTATGTACTTAATATTCTTGGTTGTGTTCAATTGGTTTGTGGCATGTTCAGAGAAAGGAAACCTGCGAGAAGATTCAGTCATATTCTTATTTCTTTACCATTAACAAGAAGATAA

Coding sequence (CDS)

ATGTTTGCCATTTTGCTTCTCTTCGTGTGGAATAGGTTTCAGCTGGCTCGTGTAGGAAGGAACCGTGGATGTTGCAGGGGAGCCACAGATTGTTCCTGTTTCCTTATATCCTTTGAAACTCATTGGCTTTTTCAATATTATGTACTTAATATTCTTGGTTGTGTTCAATTGGTTTGTGGCATGTTCAGAGAAAGGAAACCTGCGAGAAGATTCAGTCATATTCTTATTTCTTTACCATTAACAAGAAGATAA

Protein sequence

MFAILLLFVWNRFQLARVGRNRGCCRGATDCSCFLISFETHWLFQYYVLNILGCVQLVCGMFRERKPARRFSHILISLPLTRR*
Homology
[Close]
BLAST of CsGy2G017855 vs. NCBI nr
Match: KGN62382.1 (hypothetical protein Csa_018701 [Cucumis sativus])

HSP 1 Score: 171 bits (433), Expect = 1.75e-53
Identity = 83/95 (87.37%), Postives = 83/95 (87.37%), Query Frame = 0 

Query: 1  MFAILLLFVWNRFQLARVGRNRGCCRGATDCSCFLISFETHWLFQYYVLNILGCVQLVCG 60
          MFAILLLFVWNRFQLARVGRNRGCCRGATDCSCFLISFETHWLFQYYVLNILGCVQLVCG
Sbjct: 1  MFAILLLFVWNRFQLARVGRNRGCCRGATDCSCFLISFETHWLFQYYVLNILGCVQLVCG 60

Query: 61 ------------MFRERKPARRFSHILISLPLTRR 83
                      MFRERKPARRFSHILISLPLTRR
Sbjct: 61 FFFCSSMVLFAGMFRERKPARRFSHILISLPLTRR 95

[Close]
BLAST of CsGy2G017855 vs. ExPASy TrEMBL
Match: A0A0A0LNJ9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G351630 PE=4 SV=1)

HSP 1 Score: 171 bits (433), Expect = 8.49e-54
Identity = 83/95 (87.37%), Postives = 83/95 (87.37%), Query Frame = 0 

Query: 1  MFAILLLFVWNRFQLARVGRNRGCCRGATDCSCFLISFETHWLFQYYVLNILGCVQLVCG 60
          MFAILLLFVWNRFQLARVGRNRGCCRGATDCSCFLISFETHWLFQYYVLNILGCVQLVCG
Sbjct: 1  MFAILLLFVWNRFQLARVGRNRGCCRGATDCSCFLISFETHWLFQYYVLNILGCVQLVCG 60

Query: 61 ------------MFRERKPARRFSHILISLPLTRR 83
                      MFRERKPARRFSHILISLPLTRR
Sbjct: 61 FFFCSSMVLFAGMFRERKPARRFSHILISLPLTRR 95

The following BLAST results are available for this feature:
BLAST of CsGy2G017855 vs.
Match NameE-valueIdentityDescription
BLAST of CsGy2G017855 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN62382.11.75e-5387.37hypothetical protein Csa_018701 [Cucumis sativus][more]
BLAST of CsGy2G017855 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LNJ98.49e-5487.37Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G351630 PE=4 SV=1[more]
BLAST of CsGy2G017855 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsGy2G017855.1CsGy2G017855.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0016021 integral component of membrane