CsGy2G017630 (gene) Cucumber (Gy14) v2.1

Overview
NameCsGy2G017630
Typegene
OrganismCucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
DescriptionUnknown protein
LocationGy14Chr2: 27584846 .. 27585492 (+)
RNA-Seq ExpressionCsGy2G017630
SyntenyCsGy2G017630
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGATCCAACGGCTACAAAAGCTTCGTCGTCGAAATCGAAGCTGCAACGTATTAGATTCCCGCTCCCGCCACAACACAGTCAGTAACTCGCATTCAACCTACACGTGTCATTTTATCCTTCAATTTCTCTTCCAATTTAGACAAATTCAAGCTTCTCCCTCTCGTATTTATCTTTTCCTAATTGTTAGTTTTTCTTAATTAGGTATGTGTTAAATTTGTTTTTATCGTGGTAATTCTGTTTTAGTTTTTCGCACTTTCCTGCTCTCTCTATTCTCTCTCCCCTCCTCGCGCTCTGAACTCGATCGGCAGGTTCCTTACATCTCCCTTCTCTCCTTCTCACTCTCTTGGAGTCGAATTTCCTCTCGAGGAAGATAATCTTTCTTCTCAAATTTCGTGTTTAGTTTCTACCTGGAGGAAGAAAAAGCTTCATATTCGAGGATTCGATTCCAAGAGATCCATTGTTTTGTTTTTTGGTTACTCCATTTTGCTTCGTAGGGTTTCGTTGTTCATCGAGATCACTTTGATCTTTTTTATTTGATTTCCTGTCATCACAGTCTCAGGTCTTCATTTTTGCACTCTCTCCGTCGACGTTTCTGCTTAAGTTTGCTTTTTTTGTTTCTGTCTTTTTTCCTGGTATTTGTGCTTGA

mRNA sequence

ATGATCCAACGGCTACAAAAGCTTCGTCGTCGAAATCGAAGCTGCAACGTATTAGATTCCCGCTCCCGCCACAACACATTTTTCGCACTTTCCTGCTCTCTCTATTCTCTCTCCCCTCCTCGCGCTCTGAACTCGATCGGCAGGTTCCTTACATCTCCCTTCTCTCCTTCTCACTCTCTTGGAGTCGAATTTCCTCTCGAGGAAGATAATCTTTCTTCTCAAATTTCGTGTTTAGTTTCTACCTGGAGGAAGAAAAAGCTTCATATTCGAGGATTCGATTCCAAGAGATCCATTTCTCAGGTCTTCATTTTTGCACTCTCTCCGTCGACGTTTCTGCTTAAGTTTGCTTTTTTTGTTTCTGTCTTTTTTCCTGGTATTTGTGCTTGA

Coding sequence (CDS)

ATGATCCAACGGCTACAAAAGCTTCGTCGTCGAAATCGAAGCTGCAACGTATTAGATTCCCGCTCCCGCCACAACACATTTTTCGCACTTTCCTGCTCTCTCTATTCTCTCTCCCCTCCTCGCGCTCTGAACTCGATCGGCAGGTTCCTTACATCTCCCTTCTCTCCTTCTCACTCTCTTGGAGTCGAATTTCCTCTCGAGGAAGATAATCTTTCTTCTCAAATTTCGTGTTTAGTTTCTACCTGGAGGAAGAAAAAGCTTCATATTCGAGGATTCGATTCCAAGAGATCCATTTCTCAGGTCTTCATTTTTGCACTCTCTCCGTCGACGTTTCTGCTTAAGTTTGCTTTTTTTGTTTCTGTCTTTTTTCCTGGTATTTGTGCTTGA

Protein sequence

MIQRLQKLRRRNRSCNVLDSRSRHNTFFALSCSLYSLSPPRALNSIGRFLTSPFSPSHSLGVEFPLEEDNLSSQISCLVSTWRKKKLHIRGFDSKRSISQVFIFALSPSTFLLKFAFFVSVFFPGICA*
Homology
[Close]
BLAST of CsGy2G017630 vs. NCBI nr
Match: KGN62355.1 (hypothetical protein Csa_018613 [Cucumis sativus])

HSP 1 Score: 252 bits (643), Expect = 3.01e-84
Identity = 128/128 (100.00%), Postives = 128/128 (100.00%), Query Frame = 0 

Query: 1   MIQRLQKLRRRNRSCNVLDSRSRHNTFFALSCSLYSLSPPRALNSIGRFLTSPFSPSHSL 60
           MIQRLQKLRRRNRSCNVLDSRSRHNTFFALSCSLYSLSPPRALNSIGRFLTSPFSPSHSL
Sbjct: 1   MIQRLQKLRRRNRSCNVLDSRSRHNTFFALSCSLYSLSPPRALNSIGRFLTSPFSPSHSL 60

Query: 61  GVEFPLEEDNLSSQISCLVSTWRKKKLHIRGFDSKRSISQVFIFALSPSTFLLKFAFFVS 120
           GVEFPLEEDNLSSQISCLVSTWRKKKLHIRGFDSKRSISQVFIFALSPSTFLLKFAFFVS
Sbjct: 61  GVEFPLEEDNLSSQISCLVSTWRKKKLHIRGFDSKRSISQVFIFALSPSTFLLKFAFFVS 120

Query: 121 VFFPGICA 128
           VFFPGICA
Sbjct: 121 VFFPGICA 128

[Close]
BLAST of CsGy2G017630 vs. ExPASy TrEMBL
Match: A0A0A0LKB6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G350380 PE=4 SV=1)

HSP 1 Score: 252 bits (643), Expect = 1.46e-84
Identity = 128/128 (100.00%), Postives = 128/128 (100.00%), Query Frame = 0 

Query: 1   MIQRLQKLRRRNRSCNVLDSRSRHNTFFALSCSLYSLSPPRALNSIGRFLTSPFSPSHSL 60
           MIQRLQKLRRRNRSCNVLDSRSRHNTFFALSCSLYSLSPPRALNSIGRFLTSPFSPSHSL
Sbjct: 1   MIQRLQKLRRRNRSCNVLDSRSRHNTFFALSCSLYSLSPPRALNSIGRFLTSPFSPSHSL 60

Query: 61  GVEFPLEEDNLSSQISCLVSTWRKKKLHIRGFDSKRSISQVFIFALSPSTFLLKFAFFVS 120
           GVEFPLEEDNLSSQISCLVSTWRKKKLHIRGFDSKRSISQVFIFALSPSTFLLKFAFFVS
Sbjct: 61  GVEFPLEEDNLSSQISCLVSTWRKKKLHIRGFDSKRSISQVFIFALSPSTFLLKFAFFVS 120

Query: 121 VFFPGICA 128
           VFFPGICA
Sbjct: 121 VFFPGICA 128

The following BLAST results are available for this feature:
BLAST of CsGy2G017630 vs.
Match NameE-valueIdentityDescription
BLAST of CsGy2G017630 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN62355.13.01e-84100.00hypothetical protein Csa_018613 [Cucumis sativus][more]
BLAST of CsGy2G017630 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LKB61.46e-84100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G350380 PE=4 SV=1[more]
BLAST of CsGy2G017630 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsGy2G017630.2CsGy2G017630.2mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0016021 integral component of membrane