CsGy2G014390 (gene) Cucumber (Gy14) v2.1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGGGGTTTGTGCTTCCACTCAAACACCACTAACAAGGAATCCCAAATGCGGAGTCAAATTCCCCAAACAACAACAACAACAGCAACAATTATTGAATCTAGATTCAATCAAGGTCGTTCACATGGACGGCTTCATCGAGGAATTTTCCGATCCAATCAAAGCCTCCAAAATCACATCTCGTAACCCTAATTTCTTCCTCTGTAACTCAGAGCAAATGTTAATCGGTAGCTGTGTTCCTTCTCTTTCCAGCGACGAAAATCTTCAAATGGGTCAAATCTACTTCCTCCTCCCTCTCTCTCTCGCTCATTCCCCTCTTTCTCTCCCTGATCTCTGCAATTTCGCCATTAAAGCTTCCTCTGCTCTTCGAAACATTCAATCTTCCTTATTCAGGTAA ATGGGGGTTTGTGCTTCCACTCAAACACCACTAACAAGGAATCCCAAATGCGGAGTCAAATTCCCCAAACAACAACAACAACAGCAACAATTATTGAATCTAGATTCAATCAAGGTCGTTCACATGGACGGCTTCATCGAGGAATTTTCCGATCCAATCAAAGCCTCCAAAATCACATCTCGTAACCCTAATTTCTTCCTCTGTAACTCAGAGCAAATGTTAATCGGTAGCTGTGTTCCTTCTCTTTCCAGCGACGAAAATCTTCAAATGGGTCAAATCTACTTCCTCCTCCCTCTCTCTCTCGCTCATTCCCCTCTTTCTCTCCCTGATCTCTGCAATTTCGCCATTAAAGCTTCCTCTGCTCTTCGAAACATTCAATCTTCCTTATTCAGGTAA ATGGGGGTTTGTGCTTCCACTCAAACACCACTAACAAGGAATCCCAAATGCGGAGTCAAATTCCCCAAACAACAACAACAACAGCAACAATTATTGAATCTAGATTCAATCAAGGTCGTTCACATGGACGGCTTCATCGAGGAATTTTCCGATCCAATCAAAGCCTCCAAAATCACATCTCGTAACCCTAATTTCTTCCTCTGTAACTCAGAGCAAATGTTAATCGGTAGCTGTGTTCCTTCTCTTTCCAGCGACGAAAATCTTCAAATGGGTCAAATCTACTTCCTCCTCCCTCTCTCTCTCGCTCATTCCCCTCTTTCTCTCCCTGATCTCTGCAATTTCGCCATTAAAGCTTCCTCTGCTCTTCGAAACATTCAATCTTCCTTATTCAGGTAA MGVCASTQTPLTRNPKCGVKFPKQQQQQQQLLNLDSIKVVHMDGFIEEFSDPIKASKITSRNPNFFLCNSEQMLIGSCVPSLSSDENLQMGQIYFLLPLSLAHSPLSLPDLCNFAIKASSALRNIQSSLFR* Homology
BLAST of CsGy2G014390 vs. NCBI nr
Match: KAE8651930.1 (hypothetical protein Csa_006329 [Cucumis sativus]) HSP 1 Score: 261 bits (667), Expect = 1.04e-87 Identity = 131/131 (100.00%), Postives = 131/131 (100.00%), Query Frame = 0
BLAST of CsGy2G014390 vs. NCBI nr
Match: XP_008457799.2 (PREDICTED: uncharacterized protein LOC103497401 [Cucumis melo]) HSP 1 Score: 244 bits (622), Expect = 6.63e-81 Identity = 123/134 (91.79%), Postives = 127/134 (94.78%), Query Frame = 0
BLAST of CsGy2G014390 vs. NCBI nr
Match: KAG6571421.1 (hypothetical protein SDJN03_30336, partial [Cucurbita argyrosperma subsp. sororia] >KAG7011186.1 hypothetical protein SDJN02_27984, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 184 bits (466), Expect = 3.17e-57 Identity = 96/132 (72.73%), Postives = 108/132 (81.82%), Query Frame = 0
BLAST of CsGy2G014390 vs. NCBI nr
Match: KAA0045798.1 (DUF4228 domain-containing protein [Cucumis melo var. makuwa] >TYJ99483.1 DUF4228 domain-containing protein [Cucumis melo var. makuwa]) HSP 1 Score: 173 bits (439), Expect = 1.29e-53 Identity = 86/90 (95.56%), Postives = 87/90 (96.67%), Query Frame = 0
BLAST of CsGy2G014390 vs. NCBI nr
Match: XP_022158695.1 (uncharacterized protein LOC111025158 [Momordica charantia]) HSP 1 Score: 165 bits (417), Expect = 8.89e-50 Identity = 88/132 (66.67%), Postives = 103/132 (78.03%), Query Frame = 0
BLAST of CsGy2G014390 vs. ExPASy TrEMBL
Match: A0A0A0LJJ9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G287070 PE=4 SV=1) HSP 1 Score: 261 bits (667), Expect = 3.98e-88 Identity = 131/131 (100.00%), Postives = 131/131 (100.00%), Query Frame = 0
BLAST of CsGy2G014390 vs. ExPASy TrEMBL
Match: A0A1S3C6C0 (uncharacterized protein LOC103497401 OS=Cucumis melo OX=3656 GN=LOC103497401 PE=4 SV=1) HSP 1 Score: 244 bits (622), Expect = 3.21e-81 Identity = 123/134 (91.79%), Postives = 127/134 (94.78%), Query Frame = 0
BLAST of CsGy2G014390 vs. ExPASy TrEMBL
Match: A0A5A7TSG7 (DUF4228 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold123G00490 PE=4 SV=1) HSP 1 Score: 173 bits (439), Expect = 6.23e-54 Identity = 86/90 (95.56%), Postives = 87/90 (96.67%), Query Frame = 0
BLAST of CsGy2G014390 vs. ExPASy TrEMBL
Match: A0A6J1DWJ0 (uncharacterized protein LOC111025158 OS=Momordica charantia OX=3673 GN=LOC111025158 PE=4 SV=1) HSP 1 Score: 165 bits (417), Expect = 4.31e-50 Identity = 88/132 (66.67%), Postives = 103/132 (78.03%), Query Frame = 0
BLAST of CsGy2G014390 vs. ExPASy TrEMBL
Match: A0A6J0ZM23 (uncharacterized protein LOC110410065 OS=Herrania umbratica OX=108875 GN=LOC110410065 PE=4 SV=1) HSP 1 Score: 122 bits (307), Expect = 3.25e-33 Identity = 66/126 (52.38%), Postives = 82/126 (65.08%), Query Frame = 0
BLAST of CsGy2G014390 vs. TAIR 10
Match: AT5G66580.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G50800.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). ) HSP 1 Score: 84.0 bits (206), Expect = 1.0e-16 Identity = 38/94 (40.43%), Postives = 63/94 (67.02%), Query Frame = 0
BLAST of CsGy2G014390 vs. TAIR 10
Match: AT2G23690.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: petal differentiation and expansion stage; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G37240.1); Has 243 Blast hits to 243 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 241; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). ) HSP 1 Score: 78.2 bits (191), Expect = 5.6e-15 Identity = 36/85 (42.35%), Postives = 54/85 (63.53%), Query Frame = 0
BLAST of CsGy2G014390 vs. TAIR 10
Match: AT4G37240.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G23690.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). ) HSP 1 Score: 76.3 bits (186), Expect = 2.1e-14 Identity = 36/85 (42.35%), Postives = 53/85 (62.35%), Query Frame = 0
BLAST of CsGy2G014390 vs. TAIR 10
Match: AT3G50800.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G66580.1); Has 249 Blast hits to 249 proteins in 14 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 249; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 74.3 bits (181), Expect = 8.1e-14 Identity = 34/88 (38.64%), Postives = 57/88 (64.77%), Query Frame = 0
BLAST of CsGy2G014390 vs. TAIR 10
Match: AT1G21010.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G76600.1); Has 206 Blast hits to 206 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 206; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 67.0 bits (162), Expect = 1.3e-11 Identity = 33/102 (32.35%), Postives = 62/102 (60.78%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (Gy14) v2.1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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