CsGy2G012340 (gene) Cucumber (Gy14) v2.1

Overview
NameCsGy2G012340
Typegene
OrganismCucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
DescriptionUnknown protein
LocationGy14Chr2: 12270372 .. 12270698 (+)
RNA-Seq ExpressionCsGy2G012340
SyntenyCsGy2G012340
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAAATCATCTGCCGCCCGCCTTCTCCGTACCGTCTCTCTTCCTTATCTTCCAGCTCTCCTCCCCCCCTCTCTTTCTCTCTCTTACAGCTTCTTTCTCCATTTCTTCTCACACCAAACGCCGTCACCACACATCAGACCACCGCCCAATTCTCCTCCTCCTCCTCCGTCCTTCGGGTTCGATCTCTCTCTTTCCTCGCGCTGGTCGCCGCTTTGTTGTTCCCGTCGCCGGAACAACCAAGGCAGCATCAGATCTTCCATGTCCAGCTCGTGTTGTGGCGTTACAGCCTTCTTCGCGCTATTTTCTTGTTACCTGCAGTTCGTTTGA

mRNA sequence

ATGAAATCATCTGCCGCCCGCCTTCTCCGTACCGTCTCTCTTCCTTATCTTCCAGCTCTCCTCCCCCCCTCTCTTTCTCTCTCTTACAGCTTCTTTCTCCATTTCTTCTCACACCAAACGCCGTCACCACACATCAGACCACCGCCCAATTCTCCTCCTCCTCCTCCGTCCTTCGGGTTCGATCTCTCTCTTTCCTCGCGCTGGTCGCCGCTTTGTTGTTCCCGTCGCCGGAACAACCAAGGCAGCATCAGATCTTCCATGTCCAGCTCGTGTTGTGGCGTTACAGCCTTCTTCGCGCTATTTTCTTGTTACCTGCAGTTCGTTTGA

Coding sequence (CDS)

ATGAAATCATCTGCCGCCCGCCTTCTCCGTACCGTCTCTCTTCCTTATCTTCCAGCTCTCCTCCCCCCCTCTCTTTCTCTCTCTTACAGCTTCTTTCTCCATTTCTTCTCACACCAAACGCCGTCACCACACATCAGACCACCGCCCAATTCTCCTCCTCCTCCTCCGTCCTTCGGGTTCGATCTCTCTCTTTCCTCGCGCTGGTCGCCGCTTTGTTGTTCCCGTCGCCGGAACAACCAAGGCAGCATCAGATCTTCCATGTCCAGCTCGTGTTGTGGCGTTACAGCCTTCTTCGCGCTATTTTCTTGTTACCTGCAGTTCGTTTGA

Protein sequence

MKSSAARLLRTVSLPYLPALLPPSLSLSYSFFLHFFSHQTPSPHIRPPPNSPPPPPSFGFDLSLSSRWSPLCCSRRRNNQGSIRSSMSSSCCGVTAFFALFSCYLQFV*
Homology
[Close]
BLAST of CsGy2G012340 vs. NCBI nr
Match: KGN61809.1 (hypothetical protein Csa_006773 [Cucumis sativus])

HSP 1 Score: 217 bits (552), Expect = 5.21e-71
Identity = 108/108 (100.00%), Postives = 108/108 (100.00%), Query Frame = 0 

Query: 1   MKSSAARLLRTVSLPYLPALLPPSLSLSYSFFLHFFSHQTPSPHIRPPPNSPPPPPSFGF 60
           MKSSAARLLRTVSLPYLPALLPPSLSLSYSFFLHFFSHQTPSPHIRPPPNSPPPPPSFGF
Sbjct: 1   MKSSAARLLRTVSLPYLPALLPPSLSLSYSFFLHFFSHQTPSPHIRPPPNSPPPPPSFGF 60

Query: 61  DLSLSSRWSPLCCSRRRNNQGSIRSSMSSSCCGVTAFFALFSCYLQFV 108
           DLSLSSRWSPLCCSRRRNNQGSIRSSMSSSCCGVTAFFALFSCYLQFV
Sbjct: 61  DLSLSSRWSPLCCSRRRNNQGSIRSSMSSSCCGVTAFFALFSCYLQFV 108

[Close]
BLAST of CsGy2G012340 vs. ExPASy TrEMBL
Match: A0A0A0LL70 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G248660 PE=4 SV=1)

HSP 1 Score: 217 bits (552), Expect = 2.52e-71
Identity = 108/108 (100.00%), Postives = 108/108 (100.00%), Query Frame = 0 

Query: 1   MKSSAARLLRTVSLPYLPALLPPSLSLSYSFFLHFFSHQTPSPHIRPPPNSPPPPPSFGF 60
           MKSSAARLLRTVSLPYLPALLPPSLSLSYSFFLHFFSHQTPSPHIRPPPNSPPPPPSFGF
Sbjct: 1   MKSSAARLLRTVSLPYLPALLPPSLSLSYSFFLHFFSHQTPSPHIRPPPNSPPPPPSFGF 60

Query: 61  DLSLSSRWSPLCCSRRRNNQGSIRSSMSSSCCGVTAFFALFSCYLQFV 108
           DLSLSSRWSPLCCSRRRNNQGSIRSSMSSSCCGVTAFFALFSCYLQFV
Sbjct: 61  DLSLSSRWSPLCCSRRRNNQGSIRSSMSSSCCGVTAFFALFSCYLQFV 108

The following BLAST results are available for this feature:
BLAST of CsGy2G012340 vs.
Match NameE-valueIdentityDescription
BLAST of CsGy2G012340 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN61809.15.21e-71100.00hypothetical protein Csa_006773 [Cucumis sativus][more]
BLAST of CsGy2G012340 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LL702.52e-71100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G248660 PE=4 SV=1[more]
BLAST of CsGy2G012340 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsGy2G012340.2CsGy2G012340.2mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0016021 integral component of membrane