CsGy2G009800 (gene) Cucumber (Gy14) v2.1

Overview


Name	CsGy2G009800
Type	gene
Organism	Cucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
Description	Unknown protein
Location	Gy14Chr2: 9358465 .. 9358716 (+)
RNA-Seq Expression	CsGy2G009800
Synteny	CsGy2G009800

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAAGTGCACGTGGGAGAGAGGGTATGGAAAGTGAGAGGTAGGAAGGGAATTGGCGTTATTGGCAGGTGTTGGAAGGGAATAACTGGGAAGCCTCATGACCCCCACCTGACGTTGGTGAAGTCAAAAGACGGGAAGTTAGGGCAGGATTTGGATTTGAAAATAGGGTCAAATGGCTGCCCTAACTTGACCTGCCCCGACCTGCTTACGTGTGTCCTATGTTGGACTCCACGTGGGCAGATAGTGAAGTAA

mRNA sequence

ATGGAAGTGCACGTGGGAGAGAGGGTATGGAAAGTGAGAGGTAGGAAGGGAATTGGCGTTATTGGCAGGTGTTGGAAGGGAATAACTGGGAAGCCTCATGACCCCCACCTGACGTTGGTGAAGTCAAAAGACGGGAAGTTAGGGCAGGATTTGGATTTGAAAATAGGGTCAAATGGCTGCCCTAACTTGACCTGCCCCGACCTGCTTACGTGTGTCCTATGTTGGACTCCACGTGGGCAGATAGTGAAGTAA

Coding sequence (CDS)

ATGGAAGTGCACGTGGGAGAGAGGGTATGGAAAGTGAGAGGTAGGAAGGGAATTGGCGTTATTGGCAGGTGTTGGAAGGGAATAACTGGGAAGCCTCATGACCCCCACCTGACGTTGGTGAAGTCAAAAGACGGGAAGTTAGGGCAGGATTTGGATTTGAAAATAGGGTCAAATGGCTGCCCTAACTTGACCTGCCCCGACCTGCTTACGTGTGTCCTATGTTGGACTCCACGTGGGCAGATAGTGAAGTAA

Protein sequence

MEVHVGERVWKVRGRKGIGVIGRCWKGITGKPHDPHLTLVKSKDGKLGQDLDLKIGSNGCPNLTCPDLLTCVLCWTPRGQIVK*

Homology

[Close]

BLAST of CsGy2G009800 vs. NCBI nr
Match: KGN61527.1 (hypothetical protein Csa_006034 [Cucumis sativus])

HSP 1 Score: 186 bits (473), Expect = 9.54e-60
Identity = 83/83 (100.00%), Postives = 83/83 (100.00%), Query Frame = 0


Query: 1  MEVHVGERVWKVRGRKGIGVIGRCWKGITGKPHDPHLTLVKSKDGKLGQDLDLKIGSNGC 60
          MEVHVGERVWKVRGRKGIGVIGRCWKGITGKPHDPHLTLVKSKDGKLGQDLDLKIGSNGC
Sbjct: 1  MEVHVGERVWKVRGRKGIGVIGRCWKGITGKPHDPHLTLVKSKDGKLGQDLDLKIGSNGC 60

Query: 61 PNLTCPDLLTCVLCWTPRGQIVK 83
          PNLTCPDLLTCVLCWTPRGQIVK
Sbjct: 61 PNLTCPDLLTCVLCWTPRGQIVK 83

[Close]

BLAST of CsGy2G009800 vs. ExPASy TrEMBL
Match: A0A0A0LLD5 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G160610 PE=4 SV=1)

HSP 1 Score: 186 bits (473), Expect = 4.62e-60
Identity = 83/83 (100.00%), Postives = 83/83 (100.00%), Query Frame = 0


Query: 1  MEVHVGERVWKVRGRKGIGVIGRCWKGITGKPHDPHLTLVKSKDGKLGQDLDLKIGSNGC 60
          MEVHVGERVWKVRGRKGIGVIGRCWKGITGKPHDPHLTLVKSKDGKLGQDLDLKIGSNGC
Sbjct: 1  MEVHVGERVWKVRGRKGIGVIGRCWKGITGKPHDPHLTLVKSKDGKLGQDLDLKIGSNGC 60

Query: 61 PNLTCPDLLTCVLCWTPRGQIVK 83
          PNLTCPDLLTCVLCWTPRGQIVK
Sbjct: 61 PNLTCPDLLTCVLCWTPRGQIVK 83

The following BLAST results are available for this feature:

BLAST of CsGy2G009800 vs.


Match Name	E-value	Identity	Description

BLAST of CsGy2G009800 vs. NCBI nr


Match Name	E-value	Identity	Description
KGN61527.1	9.54e-60	100.00	hypothetical protein Csa_006034 [Cucumis sativus]	[more]

BLAST of CsGy2G009800 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LLD5	4.62e-60	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G160610 PE=4 SV=1	[more]

BLAST of CsGy2G009800 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsGy2G009800.2	CsGy2G009800.2	mRNA