CsGy2G008833 (gene) Cucumber (Gy14) v2.1

Overview
NameCsGy2G008833
Typegene
OrganismCucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
DescriptionUnknown protein
LocationGy14Chr2: 8005537 .. 8005740 (+)
RNA-Seq ExpressionCsGy2G008833
SyntenyCsGy2G008833
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAGCTCCTCCGTCTTCGATCACCTAATTCCATTATTTCCTCTCAACGAACTCCTCCATCCTTACTGTCTTCACCATTACAGTACATCTTCTTCTTCTTCCTTTTACATGCATTTGTTGTTGCACTTCATCCTGCTTACTGGTTATCTCACGAATGGAACAAAATCCCAAGATCGTCAAGTGACGGTTAATCGAAAACTGTAG

mRNA sequence

ATGAGCTCCTCCGTCTTCGATCACCTAATTCCATTATTTCCTCTCAACGAACTCCTCCATCCTTACTGTCTTCACCATTACAGTACATCTTCTTCTTCTTCCTTTTACATGCATTTGTTGTTGCACTTCATCCTGCTTACTGGTTATCTCACGAATGGAACAAAATCCCAAGATCGTCAAGTGACGGTTAATCGAAAACTGTAG

Coding sequence (CDS)

ATGAGCTCCTCCGTCTTCGATCACCTAATTCCATTATTTCCTCTCAACGAACTCCTCCATCCTTACTGTCTTCACCATTACAGTACATCTTCTTCTTCTTCCTTTTACATGCATTTGTTGTTGCACTTCATCCTGCTTACTGGTTATCTCACGAATGGAACAAAATCCCAAGATCGTCAAGTGACGGTTAATCGAAAACTGTAG

Protein sequence

MSSSVFDHLIPLFPLNELLHPYCLHHYSTSSSSSFYMHLLLHFILLTGYLTNGTKSQDRQVTVNRKL*
Homology
[Close]
BLAST of CsGy2G008833 vs. NCBI nr
Match: KGN61406.1 (hypothetical protein Csa_006281 [Cucumis sativus])

HSP 1 Score: 139 bits (350), Expect = 1.83e-41
Identity = 67/67 (100.00%), Postives = 67/67 (100.00%), Query Frame = 0 

Query: 1  MSSSVFDHLIPLFPLNELLHPYCLHHYSTSSSSSFYMHLLLHFILLTGYLTNGTKSQDRQ 60
          MSSSVFDHLIPLFPLNELLHPYCLHHYSTSSSSSFYMHLLLHFILLTGYLTNGTKSQDRQ
Sbjct: 1  MSSSVFDHLIPLFPLNELLHPYCLHHYSTSSSSSFYMHLLLHFILLTGYLTNGTKSQDRQ 60

Query: 61 VTVNRKL 67
          VTVNRKL
Sbjct: 61 VTVNRKL 67

[Close]
BLAST of CsGy2G008833 vs. ExPASy TrEMBL
Match: A0A0A0LN60 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G118290 PE=4 SV=1)

HSP 1 Score: 139 bits (350), Expect = 8.85e-42
Identity = 67/67 (100.00%), Postives = 67/67 (100.00%), Query Frame = 0 

Query: 1  MSSSVFDHLIPLFPLNELLHPYCLHHYSTSSSSSFYMHLLLHFILLTGYLTNGTKSQDRQ 60
          MSSSVFDHLIPLFPLNELLHPYCLHHYSTSSSSSFYMHLLLHFILLTGYLTNGTKSQDRQ
Sbjct: 1  MSSSVFDHLIPLFPLNELLHPYCLHHYSTSSSSSFYMHLLLHFILLTGYLTNGTKSQDRQ 60

Query: 61 VTVNRKL 67
          VTVNRKL
Sbjct: 61 VTVNRKL 67

The following BLAST results are available for this feature:
BLAST of CsGy2G008833 vs.
Match NameE-valueIdentityDescription
BLAST of CsGy2G008833 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN61406.11.83e-41100.00hypothetical protein Csa_006281 [Cucumis sativus][more]
BLAST of CsGy2G008833 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LN608.85e-42100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G118290 PE=4 SV=1[more]
BLAST of CsGy2G008833 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsGy2G008833.1CsGy2G008833.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0016021 integral component of membrane