Sequences
The following sequences are available for this feature:
Gene sequence (with intron) Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. ATGGTTGCAGATCGAAAGCGAAACACCTTCAAGACGACGCCTGTAGCAATTTCATCGTTAACGGCAAGCGAAACGAAAGTGAGATGGCAGAAGACAATGGCTGAAACTAAGAATAAAGTTTATAGGGAGAGAGAGAGTTATCATAGAGGAGTCTACAGGGAGGGAGGGAGAGAGCAATGA mRNA sequence ATGGTTGCAGATCGAAAGCGAAACACCTTCAAGACGACGCCTGTAGCAATTTCATCGTTAACGGCAAGCGAAACGAAAGTGAGATGGCAGAAGACAATGGCTGAAACTAAGAATAAAGTTTATAGGGAGAGAGAGAGTTATCATAGAGGAGTCTACAGGGAGGGAGGGAGAGAGCAATGA Coding sequence (CDS) ATGGTTGCAGATCGAAAGCGAAACACCTTCAAGACGACGCCTGTAGCAATTTCATCGTTAACGGCAAGCGAAACGAAAGTGAGATGGCAGAAGACAATGGCTGAAACTAAGAATAAAGTTTATAGGGAGAGAGAGAGTTATCATAGAGGAGTCTACAGGGAGGGAGGGAGAGAGCAATGA Protein sequence MVADRKRNTFKTTPVAISSLTASETKVRWQKTMAETKNKVYRERESYHRGVYREGGREQ*
Homology
BLAST of CsGy2G008680 vs. NCBI nr
Match: KAE8651751.1 (hypothetical protein Csa_006260 [Cucumis sativus]) HSP 1 Score: 108 bits (269), Expect = 1.81e-28 Identity = 55/56 (98.21%), Postives = 56/56 (100.00%), Query Frame = 0
Query: 4 DRKRNTFKTTPVAISSLTASETKVRWQKTMAETKNKVYRERESYHRGVYREGGREQ 59
+RKRNTFKTTPVAISSLTASETKVRWQKTMAETKNKVYRERESYHRGVYREGGREQ
Sbjct: 75 NRKRNTFKTTPVAISSLTASETKVRWQKTMAETKNKVYRERESYHRGVYREGGREQ 130
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
|---|
| Match Name | E-value | Identity | Description | |
|---|
| KAE8651751.1 | 1.81e-28 | 98.21 | hypothetical protein Csa_006260 [Cucumis sativus] | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| Match Name | E-value | Identity | Description | |
|---|
InterPro
Analysis Name: InterPro Annotations of Cucumber (Gy14) v2.1
Date Performed: 2021-10-25
| IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
|---|
| None | No IPR available | COILS | Coil | Coil | coord: 57..59 |
Relationships
The following mRNA feature(s) are a part of this gene:
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