CsGy2G007155 (gene) Cucumber (Gy14) v2.1

Overview
NameCsGy2G007155
Typegene
OrganismCucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
DescriptionUnknown protein
LocationGy14Chr2: 5686298 .. 5686622 (+)
RNA-Seq ExpressionCsGy2G007155
SyntenyCsGy2G007155
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCAACTCAGAAGTTTGTTACAATATCAATTGTTGTCCTTGTGATATTCACTTGCATTATATCAACATGTATGCTCTTAACTCATAACTCCTCTAATTAATTTCTTATAATACTATTTTTGTTAGAATAATGTTTTAAACAATATTATCTTTGGTGACATGATAGCAAAAGGAGACGTGCTGAATATGCATTGTGTTCAACCATGCTCTGACACTTATGATGACGAATCGTGTTATAATGATTGCATCAAAGAGAATCTTGGTGCCGGATTTTGTTACCCAAAGCTACCTAGCACAGATAAAGATTGTTGTTGTAGTGTTTGA

mRNA sequence

ATGGCAACTCAGAAGTTTGTTACAATATCAATTGTTGTCCTTGTGATATTCACTTGCATTATATCAACATCAAAAGGAGACGTGCTGAATATGCATTGTGTTCAACCATGCTCTGACACTTATGATGACGAATCGTGTTATAATGATTGCATCAAAGAGAATCTTGGTGCCGGATTTTGTTACCCAAAGCTACCTAGCACAGATAAAGATTGTTGTTGTAGTGTTTGA

Coding sequence (CDS)

ATGGCAACTCAGAAGTTTGTTACAATATCAATTGTTGTCCTTGTGATATTCACTTGCATTATATCAACATCAAAAGGAGACGTGCTGAATATGCATTGTGTTCAACCATGCTCTGACACTTATGATGACGAATCGTGTTATAATGATTGCATCAAAGAGAATCTTGGTGCCGGATTTTGTTACCCAAAGCTACCTAGCACAGATAAAGATTGTTGTTGTAGTGTTTGA

Protein sequence

MATQKFVTISIVVLVIFTCIISTSKGDVLNMHCVQPCSDTYDDESCYNDCIKENLGAGFCYPKLPSTDKDCCCSV*
Homology
BLAST of CsGy2G007155 vs. NCBI nr
Match: KGN61228.1 (hypothetical protein Csa_006463 [Cucumis sativus])

HSP 1 Score: 144 bits (364), Expect = 2.34e-43
Identity = 65/75 (86.67%), Postives = 71/75 (94.67%), Query Frame = 0

Query: 1  MATQKFVTISIVVLVIFTCIISTSKGDVLNMHCVQPCSDTYDDESCYNDCIKENLGAGFC 60
          MATQK  TISIVVL+IF CI ST+KGDVLN+HCV+PCSDTYDDESCYNDCI+ENLGAGFC
Sbjct: 1  MATQKLATISIVVLMIFACIASTTKGDVLNVHCVRPCSDTYDDESCYNDCIQENLGAGFC 60

Query: 61 YPKLPSTDKDCCCSV 75
          YPKLPSTDKDCCC+V
Sbjct: 61 YPKLPSTDKDCCCNV 75

BLAST of CsGy2G007155 vs. NCBI nr
Match: KAE8651697.1 (hypothetical protein Csa_006343 [Cucumis sativus])

HSP 1 Score: 140 bits (352), Expect = 1.59e-41
Identity = 61/75 (81.33%), Postives = 71/75 (94.67%), Query Frame = 0

Query: 1  MATQKFVTISIVVLVIFTCIISTSKGDVLNMHCVQPCSDTYDDESCYNDCIKENLGAGFC 60
          MATQK  T+SIV+L+I  CI+ST+KGDVLN++CV+PCSDTYDDESCYNDCI+ENLGAGFC
Sbjct: 1  MATQKLATVSIVMLMILACIVSTTKGDVLNVNCVRPCSDTYDDESCYNDCIRENLGAGFC 60

Query: 61 YPKLPSTDKDCCCSV 75
          YPKLPSTDKDCCC+V
Sbjct: 61 YPKLPSTDKDCCCNV 75

BLAST of CsGy2G007155 vs. NCBI nr
Match: KAE8651701.1 (hypothetical protein Csa_006400, partial [Cucumis sativus])

HSP 1 Score: 120 bits (300), Expect = 1.01e-33
Identity = 50/51 (98.04%), Postives = 51/51 (100.00%), Query Frame = 0

Query: 24 SKGDVLNMHCVQPCSDTYDDESCYNDCIKENLGAGFCYPKLPSTDKDCCCS 74
          +KGDVLNMHCVQPCSDTYDDESCYNDCIKENLGAGFCYPKLPSTDKDCCCS
Sbjct: 14 AKGDVLNMHCVQPCSDTYDDESCYNDCIKENLGAGFCYPKLPSTDKDCCCS 64

BLAST of CsGy2G007155 vs. NCBI nr
Match: KAG6586428.1 (hypothetical protein SDJN03_19161, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 87.4 bits (215), Expect = 1.25e-20
Identity = 39/76 (51.32%), Postives = 58/76 (76.32%), Query Frame = 0

Query: 1  MATQKFVTISIVVLVIFTCIISTSKGDVLNMHCVQPCSDTYDDESCYNDCIKENLGAGFC 60
          MA++K  T+  +V+++F    S++KGD+  M C++PC D +DD+SCY+DC++ N GAGFC
Sbjct: 1  MASRKLFTVFAIVMMMFY-FASSAKGDMF-MECIRPCVDAFDDDSCYDDCVRANKGAGFC 60

Query: 61 YPKLPST--DKDCCCS 74
          YPKLPS   +KDCCC+
Sbjct: 61 YPKLPSVTNEKDCCCN 74

BLAST of CsGy2G007155 vs. NCBI nr
Match: KGN54497.1 (hypothetical protein Csa_012842 [Cucumis sativus])

HSP 1 Score: 66.2 bits (160), Expect = 3.18e-12
Identity = 36/76 (47.37%), Postives = 48/76 (63.16%), Query Frame = 0

Query: 1  MATQKFVTISIVVLVIFTCIISTSKGDVLNMHCVQPCSDTYDDESCYNDCIKENLGAGFC 60
          M TQK   +S++V V F+C  S+ +GD L  +CV PCS+   D  C   CI+++ GAGFC
Sbjct: 1  MVTQKLFIVSMLVAVTFSCFASSMEGDDL-WNCVIPCSNNNGDILCNTACIEQDEGAGFC 60

Query: 61 YPKLP--STDKDCCCS 74
           PKLP  S  K CCC+
Sbjct: 61 VPKLPGISDMKVCCCN 75

BLAST of CsGy2G007155 vs. ExPASy TrEMBL
Match: A0A0A0LHG9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G071930 PE=4 SV=1)

HSP 1 Score: 144 bits (364), Expect = 1.13e-43
Identity = 65/75 (86.67%), Postives = 71/75 (94.67%), Query Frame = 0

Query: 1  MATQKFVTISIVVLVIFTCIISTSKGDVLNMHCVQPCSDTYDDESCYNDCIKENLGAGFC 60
          MATQK  TISIVVL+IF CI ST+KGDVLN+HCV+PCSDTYDDESCYNDCI+ENLGAGFC
Sbjct: 1  MATQKLATISIVVLMIFACIASTTKGDVLNVHCVRPCSDTYDDESCYNDCIQENLGAGFC 60

Query: 61 YPKLPSTDKDCCCSV 75
          YPKLPSTDKDCCC+V
Sbjct: 61 YPKLPSTDKDCCCNV 75

BLAST of CsGy2G007155 vs. ExPASy TrEMBL
Match: A0A0A0LJG5 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G072430 PE=4 SV=1)

HSP 1 Score: 143 bits (360), Expect = 4.62e-43
Identity = 64/74 (86.49%), Postives = 70/74 (94.59%), Query Frame = 0

Query: 1  MATQKFVTISIVVLVIFTCIISTSKGDVLNMHCVQPCSDTYDDESCYNDCIKENLGAGFC 60
          MATQK  TISIVVLVIF CI+ST+KGDVLN+HCV+PC DTYDDESCYNDCI+ENLGAGFC
Sbjct: 1  MATQKLATISIVVLVIFPCIVSTTKGDVLNVHCVRPCYDTYDDESCYNDCIRENLGAGFC 60

Query: 61 YPKLPSTDKDCCCS 74
          YPKLPSTDKDCCC+
Sbjct: 61 YPKLPSTDKDCCCN 74

BLAST of CsGy2G007155 vs. ExPASy TrEMBL
Match: A0A0A0LKF5 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G070930 PE=4 SV=1)

HSP 1 Score: 118 bits (295), Expect = 2.19e-33
Identity = 47/53 (88.68%), Postives = 53/53 (100.00%), Query Frame = 0

Query: 23 TSKGDVLNMHCVQPCSDTYDDESCYNDCIKENLGAGFCYPKLPSTDKDCCCSV 75
          T+KGD+LN+HCV+PCSDTYDDESCYNDCI+ENLGAGFCYPKLPSTDKDCCC+V
Sbjct: 2  TAKGDILNVHCVRPCSDTYDDESCYNDCIRENLGAGFCYPKLPSTDKDCCCNV 54

BLAST of CsGy2G007155 vs. ExPASy TrEMBL
Match: A0A0A0L1R8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G339000 PE=4 SV=1)

HSP 1 Score: 66.2 bits (160), Expect = 1.54e-12
Identity = 36/76 (47.37%), Postives = 48/76 (63.16%), Query Frame = 0

Query: 1  MATQKFVTISIVVLVIFTCIISTSKGDVLNMHCVQPCSDTYDDESCYNDCIKENLGAGFC 60
          M TQK   +S++V V F+C  S+ +GD L  +CV PCS+   D  C   CI+++ GAGFC
Sbjct: 1  MVTQKLFIVSMLVAVTFSCFASSMEGDDL-WNCVIPCSNNNGDILCNTACIEQDEGAGFC 60

Query: 61 YPKLP--STDKDCCCS 74
           PKLP  S  K CCC+
Sbjct: 61 VPKLPGISDMKVCCCN 75

BLAST of CsGy2G007155 vs. ExPASy TrEMBL
Match: A0A5A7TJH1 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold1167G00010 PE=4 SV=1)

HSP 1 Score: 63.9 bits (154), Expect = 1.17e-11
Identity = 29/73 (39.73%), Postives = 44/73 (60.27%), Query Frame = 0

Query: 1  MATQKFVTISIVVLVIFTCIISTSKGDVLNMHCVQPCSDTYDDESCYNDCIKENLGAGFC 60
          M T+K + + + + V+  C ++ S+G  L  +C++PCS+TY   SCY DC   N G G C
Sbjct: 1  MPTRKLLVVFVAITVLLACFVTLSEGQGL-WNCIRPCSETYKSLSCYVDCGALNKGTGAC 60

Query: 61 YPKLPSTDKDCCC 73
           PK P +D+  CC
Sbjct: 61 IPKRPVSDEYVCC 72

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
KGN61228.12.34e-4386.67hypothetical protein Csa_006463 [Cucumis sativus][more]
KAE8651697.11.59e-4181.33hypothetical protein Csa_006343 [Cucumis sativus][more]
KAE8651701.11.01e-3398.04hypothetical protein Csa_006400, partial [Cucumis sativus][more]
KAG6586428.11.25e-2051.32hypothetical protein SDJN03_19161, partial [Cucurbita argyrosperma subsp. sorori... [more]
KGN54497.13.18e-1247.37hypothetical protein Csa_012842 [Cucumis sativus][more]
Match NameE-valueIdentityDescription
A0A0A0LHG91.13e-4386.67Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G071930 PE=4 SV=1[more]
A0A0A0LJG54.62e-4386.49Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G072430 PE=4 SV=1[more]
A0A0A0LKF52.19e-3388.68Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G070930 PE=4 SV=1[more]
A0A0A0L1R81.54e-1247.37Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G339000 PE=4 SV=1[more]
A0A5A7TJH11.17e-1139.73Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... [more]
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsGy2G007155.1CsGy2G007155.1mRNA