CsGy2G006605 (gene) Cucumber (Gy14) v2.1

Overview
NameCsGy2G006605
Typegene
OrganismCucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
DescriptionUnknown protein
LocationGy14Chr2: 5023545 .. 5023736 (-)
RNA-Seq ExpressionCsGy2G006605
SyntenyCsGy2G006605
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTTGTTCTGCAAGGAGGAGAAGGAATTGGGTCGCCAGCAGGCGACGGGCACGTGCCCGTCATGTGGGGGCAAAGTTCAAGCGGTGGATGTGGAGAGAAAATGGAGGTTCTGTTTTGTTCCACTCTGTTTCAAAATCAAGAGGAAATATTACTGTCTAATATGTGGTCGTCGTTTGGAGTTGTATCATTAG

mRNA sequence

ATGTTGTTCTGCAAGGAGGAGAAGGAATTGGGTCGCCAGCAGGCGACGGGCACGTGCCCGTCATGTGGGGGCAAAGTTCAAGCGGTGGATGTGGAGAGAAAATGGAGGTTCTGTTTTGTTCCACTCTGTTTCAAAATCAAGAGGAAATATTACTGTCTAATATGTGGTCGTCGTTTGGAGTTGTATCATTAG

Coding sequence (CDS)

ATGTTGTTCTGCAAGGAGGAGAAGGAATTGGGTCGCCAGCAGGCGACGGGCACGTGCCCGTCATGTGGGGGCAAAGTTCAAGCGGTGGATGTGGAGAGAAAATGGAGGTTCTGTTTTGTTCCACTCTGTTTCAAAATCAAGAGGAAATATTACTGTCTAATATGTGGTCGTCGTTTGGAGTTGTATCATTAG

Protein sequence

MLFCKEEKELGRQQATGTCPSCGGKVQAVDVERKWRFCFVPLCFKIKRKYYCLICGRRLELYH*
Homology
BLAST of CsGy2G006605 vs. NCBI nr
Match: XP_011648964.1 (uncharacterized protein LOC105434563 [Cucumis sativus])

HSP 1 Score: 142 bits (357), Expect = 1.18e-42
Identity = 62/63 (98.41%), Postives = 63/63 (100.00%), Query Frame = 0

Query: 1  MLFCKEEKELGRQQATGTCPSCGGKVQAVDVERKWRFCFVPLCFKIKRKYYCLICGRRLE 60
          MLFCKEEKELGRQQATGTCPSCGGKVQAVDVER+WRFCFVPLCFKIKRKYYCLICGRRLE
Sbjct: 1  MLFCKEEKELGRQQATGTCPSCGGKVQAVDVERRWRFCFVPLCFKIKRKYYCLICGRRLE 60

Query: 61 LYH 63
          LYH
Sbjct: 61 LYH 63

BLAST of CsGy2G006605 vs. NCBI nr
Match: XP_008451097.1 (PREDICTED: uncharacterized protein LOC103492473 [Cucumis melo])

HSP 1 Score: 139 bits (350), Expect = 1.38e-41
Identity = 61/63 (96.83%), Postives = 62/63 (98.41%), Query Frame = 0

Query: 1  MLFCKEEKELGRQQATGTCPSCGGKVQAVDVERKWRFCFVPLCFKIKRKYYCLICGRRLE 60
          MLFCKEEKELGR+QATGTCPSCGGKVQAVDVERKWR CFVPLCFKIKRKYYCLICGRRLE
Sbjct: 1  MLFCKEEKELGRRQATGTCPSCGGKVQAVDVERKWRLCFVPLCFKIKRKYYCLICGRRLE 60

Query: 61 LYH 63
          LYH
Sbjct: 61 LYH 63

BLAST of CsGy2G006605 vs. NCBI nr
Match: XP_038891000.1 (uncharacterized protein LOC120080412 [Benincasa hispida])

HSP 1 Score: 135 bits (339), Expect = 6.61e-40
Identity = 58/63 (92.06%), Postives = 61/63 (96.83%), Query Frame = 0

Query: 1  MLFCKEEKELGRQQATGTCPSCGGKVQAVDVERKWRFCFVPLCFKIKRKYYCLICGRRLE 60
          MLFC EEKELGR+QATGTCPSCGGKVQAVDVERKWR CFVPLCFKIKRKYYC++CGRRLE
Sbjct: 1  MLFCNEEKELGRRQATGTCPSCGGKVQAVDVERKWRLCFVPLCFKIKRKYYCVMCGRRLE 60

Query: 61 LYH 63
          LYH
Sbjct: 61 LYH 63

BLAST of CsGy2G006605 vs. NCBI nr
Match: XP_023547069.1 (uncharacterized protein LOC111805987 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 122 bits (307), Expect = 5.08e-35
Identity = 52/63 (82.54%), Postives = 57/63 (90.48%), Query Frame = 0

Query: 1  MLFCKEEKELGRQQATGTCPSCGGKVQAVDVERKWRFCFVPLCFKIKRKYYCLICGRRLE 60
          MLFCKE+KELGR+QA G CP CGGKV+AVDVERKWR C  PLCFKIKRKYYCL+CGRRLE
Sbjct: 1  MLFCKEDKELGRRQAMGRCPLCGGKVEAVDVERKWRLCLAPLCFKIKRKYYCLMCGRRLE 60

Query: 61 LYH 63
          LY+
Sbjct: 61 LYY 63

BLAST of CsGy2G006605 vs. NCBI nr
Match: XP_022929732.1 (uncharacterized protein LOC111436231 [Cucurbita moschata] >XP_022996867.1 uncharacterized protein LOC111491984 [Cucurbita maxima])

HSP 1 Score: 121 bits (304), Expect = 1.46e-34
Identity = 51/63 (80.95%), Postives = 57/63 (90.48%), Query Frame = 0

Query: 1  MLFCKEEKELGRQQATGTCPSCGGKVQAVDVERKWRFCFVPLCFKIKRKYYCLICGRRLE 60
          MLFCKE+KELGR+QA G CP CGGKV+AVDVERKWR C  PLCFKIKRKYYC++CGRRLE
Sbjct: 1  MLFCKEDKELGRRQAMGRCPLCGGKVEAVDVERKWRLCLAPLCFKIKRKYYCVMCGRRLE 60

Query: 61 LYH 63
          LY+
Sbjct: 61 LYY 63

BLAST of CsGy2G006605 vs. ExPASy TrEMBL
Match: A0A1S3BRU0 (uncharacterized protein LOC103492473 OS=Cucumis melo OX=3656 GN=LOC103492473 PE=4 SV=1)

HSP 1 Score: 139 bits (350), Expect = 6.69e-42
Identity = 61/63 (96.83%), Postives = 62/63 (98.41%), Query Frame = 0

Query: 1  MLFCKEEKELGRQQATGTCPSCGGKVQAVDVERKWRFCFVPLCFKIKRKYYCLICGRRLE 60
          MLFCKEEKELGR+QATGTCPSCGGKVQAVDVERKWR CFVPLCFKIKRKYYCLICGRRLE
Sbjct: 1  MLFCKEEKELGRRQATGTCPSCGGKVQAVDVERKWRLCFVPLCFKIKRKYYCLICGRRLE 60

Query: 61 LYH 63
          LYH
Sbjct: 61 LYH 63

BLAST of CsGy2G006605 vs. ExPASy TrEMBL
Match: A0A6J1K383 (uncharacterized protein LOC111491984 OS=Cucurbita maxima OX=3661 GN=LOC111491984 PE=4 SV=1)

HSP 1 Score: 121 bits (304), Expect = 7.06e-35
Identity = 51/63 (80.95%), Postives = 57/63 (90.48%), Query Frame = 0

Query: 1  MLFCKEEKELGRQQATGTCPSCGGKVQAVDVERKWRFCFVPLCFKIKRKYYCLICGRRLE 60
          MLFCKE+KELGR+QA G CP CGGKV+AVDVERKWR C  PLCFKIKRKYYC++CGRRLE
Sbjct: 1  MLFCKEDKELGRRQAMGRCPLCGGKVEAVDVERKWRLCLAPLCFKIKRKYYCVMCGRRLE 60

Query: 61 LYH 63
          LY+
Sbjct: 61 LYY 63

BLAST of CsGy2G006605 vs. ExPASy TrEMBL
Match: A0A6J1ENJ0 (uncharacterized protein LOC111436231 OS=Cucurbita moschata OX=3662 GN=LOC111436231 PE=4 SV=1)

HSP 1 Score: 121 bits (304), Expect = 7.06e-35
Identity = 51/63 (80.95%), Postives = 57/63 (90.48%), Query Frame = 0

Query: 1  MLFCKEEKELGRQQATGTCPSCGGKVQAVDVERKWRFCFVPLCFKIKRKYYCLICGRRLE 60
          MLFCKE+KELGR+QA G CP CGGKV+AVDVERKWR C  PLCFKIKRKYYC++CGRRLE
Sbjct: 1  MLFCKEDKELGRRQAMGRCPLCGGKVEAVDVERKWRLCLAPLCFKIKRKYYCVMCGRRLE 60

Query: 61 LYH 63
          LY+
Sbjct: 61 LYY 63

BLAST of CsGy2G006605 vs. ExPASy TrEMBL
Match: A0A6J1D838 (uncharacterized protein LOC111018230 OS=Momordica charantia OX=3673 GN=LOC111018230 PE=4 SV=1)

HSP 1 Score: 109 bits (273), Expect = 3.71e-30
Identity = 50/63 (79.37%), Postives = 56/63 (88.89%), Query Frame = 0

Query: 1  MLFCKEEKELGRQQATGTCPSCGGKVQAVDVERKWRFCFVPLCFKIKRKYYCLICGRRLE 60
          M+FCKEE EL R+QA+GTCPSCGGKV+AVDVERKWR   VPLCFKIKRKY C++CGRRLE
Sbjct: 1  MIFCKEE-ELVRRQASGTCPSCGGKVEAVDVERKWRLFSVPLCFKIKRKYLCVMCGRRLE 60

Query: 61 LYH 63
          L H
Sbjct: 61 LNH 62

BLAST of CsGy2G006605 vs. ExPASy TrEMBL
Match: A0A2C9UN96 (Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_14G162900 PE=4 SV=1)

HSP 1 Score: 109 bits (273), Expect = 4.24e-30
Identity = 45/59 (76.27%), Postives = 53/59 (89.83%), Query Frame = 0

Query: 5  KEEKELGRQQATGTCPSCGGKVQAVDVERKWRFCFVPLCFKIKRKYYCLICGRRLELYH 63
          +EEKELGRQQA G+CP CGGKV A+DVERKW FCF+P+C+KIKRKY+C +C RRLELYH
Sbjct: 9  EEEKELGRQQAPGSCPYCGGKVLAMDVERKWSFCFLPICYKIKRKYFCSLCARRLELYH 67

BLAST of CsGy2G006605 vs. TAIR 10
Match: AT5G57123.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G29905.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 104.8 bits (260), Expect = 2.7e-23
Identity = 46/59 (77.97%), Postives = 49/59 (83.05%), Query Frame = 0

Query: 5  KEEKELGRQQATGTCPSCGGKVQAVDVERKWRFCFVPLCFKIKRKYYCLICGRRLELYH 64
          +EE ELGRQQA G+CP CGGKVQ +DVERKW FCFVPLCFKIKRKY C  C RRL LYH
Sbjct: 9  EEETELGRQQAPGSCPYCGGKVQMLDVERKWMFCFVPLCFKIKRKYSCSSCDRRLVLYH 67

BLAST of CsGy2G006605 vs. TAIR 10
Match: AT4G29905.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G57123.1); Has 73 Blast hits to 73 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 73; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 95.5 bits (236), Expect = 1.6e-20
Identity = 40/63 (63.49%), Postives = 49/63 (77.78%), Query Frame = 0

Query: 1  MLFCKEEKELGRQQATGTCPSCGGKVQAVDVERKWRFCFVPLCFKIKRKYYCLICGRRLE 60
          +++ +E+ ELGRQQA G CP CGGKV AVD+E KW FCF+PLCFK+KRKY C  C R L 
Sbjct: 5  VVYHEEKTELGRQQAPGMCPYCGGKVSAVDIETKWLFCFLPLCFKVKRKYSCSSCERHLV 64

Query: 61 LYH 64
          LY+
Sbjct: 65 LYY 67

BLAST of CsGy2G006605 vs. TAIR 10
Match: AT5G10695.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G57123.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 75.1 bits (183), Expect = 2.3e-14
Identity = 31/55 (56.36%), Postives = 39/55 (70.91%), Query Frame = 0

Query: 5  KEEKELGRQQATGTCPSCGGKVQAVDVERKWRFCFVPLCFKIKRKYYCLICGRRL 60
          ++E+ +GR  A G CP CGG VQ VDV  +WRFCFVPL  K KR++ C  CG+RL
Sbjct: 9  QDERVIGRYAAPGACPYCGGAVQVVDVNSQWRFCFVPLSNKSKRRHLCSTCGKRL 63

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
XP_011648964.11.18e-4298.41uncharacterized protein LOC105434563 [Cucumis sativus][more]
XP_008451097.11.38e-4196.83PREDICTED: uncharacterized protein LOC103492473 [Cucumis melo][more]
XP_038891000.16.61e-4092.06uncharacterized protein LOC120080412 [Benincasa hispida][more]
XP_023547069.15.08e-3582.54uncharacterized protein LOC111805987 [Cucurbita pepo subsp. pepo][more]
XP_022929732.11.46e-3480.95uncharacterized protein LOC111436231 [Cucurbita moschata] >XP_022996867.1 unchar... [more]
Match NameE-valueIdentityDescription
A0A1S3BRU06.69e-4296.83uncharacterized protein LOC103492473 OS=Cucumis melo OX=3656 GN=LOC103492473 PE=... [more]
A0A6J1K3837.06e-3580.95uncharacterized protein LOC111491984 OS=Cucurbita maxima OX=3661 GN=LOC111491984... [more]
A0A6J1ENJ07.06e-3580.95uncharacterized protein LOC111436231 OS=Cucurbita moschata OX=3662 GN=LOC1114362... [more]
A0A6J1D8383.71e-3079.37uncharacterized protein LOC111018230 OS=Momordica charantia OX=3673 GN=LOC111018... [more]
A0A2C9UN964.24e-3076.27Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_14G162900 PE=4 SV=... [more]
Match NameE-valueIdentityDescription
AT5G57123.12.7e-2377.97unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA... [more]
AT4G29905.11.6e-2063.49unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA... [more]
AT5G10695.12.3e-1456.36unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA... [more]
InterPro
Analysis Name: InterPro Annotations of Cucumber (Gy14) v2.1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR33320METHIONYL-TRNA SYNTHETASEcoord: 4..62
NoneNo IPR availablePANTHERPTHR33320:SF13SUBFAMILY NOT NAMEDcoord: 4..62

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsGy2G006605.1CsGy2G006605.1mRNA