CsGy2G006360 (gene) Cucumber (Gy14) v2.1

Overview


Name	CsGy2G006360
Type	gene
Organism	Cucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
Description	nifU-like protein 3, chloroplastic
Location	Gy14Chr2: 4716078 .. 4718177 (-)
RNA-Seq Expression	CsGy2G006360
Synteny	CsGy2G006360

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CGTTTCTCCTTCCCAATTTCCATCCACATAATCTTTGGCATACACCATTGATGATCTTCATTCTTCATCTTCATCACTCAATCGCTGCGTTTCCCTTCAGCAAACCATAACATAAATCCCCATGGCCTAACTCAACTCTTTTCCTTCCACTTCCATTTCAATGGTGGCCACTTTCTCAACTCGAGCTCAACCTTTCAAATCAACTCCAATAGCTGCAACTCTCTATCGTTCACCCTCTCACCCAGCTTCACCTTCCTATTTATCTTTCTTCAAGGTTGGTTTCATGGTTCTGTTTGTAATTTTCACCAATTTTTTAGTATTCAACTGATGGGTTGGCATTATTTGAATCAGAGTTCGTTCTTTAGAGGTCAGTTTTGTAGCCGGCACTTTCTTCGCTTCAATTCAAGTTGTACTCGGATACGTCATTTAGGTAGCATTTCTTGATTTTGCTCCTACGAAATCTGGCTTATTCTTGGAGTTTTTAGATGATTGATTCTAATGCAAAAGTTGAGTTAAAAAGATCATGTGGCAAACAAATGTTAGAAGCAACTTATGTTCCCTTGTAAATTCTTGTTTTATCTTAACCCATTGGGTTTGTTCCATTCTAATTGAGCTTATCCATGGGAAATTGTTGAAAATCTCTAAAATGTTTTCTTATTTCCATCTTTTTGGCAATTCCTTATAATAGTCTTTCTTTCTTGGGCTTATTGTATCCGCTATCAACTTCGCGATTTTTTAAGGCTTTCTTGATAGAGTCTCGACCAGGACAAAGACTGAGAATGTATGTAATCTTTTCCTGTATTGATTTTCTTTTAAGATATTGCCCCAATTCATCGATATTAATGGCAGAAAGTAAAACCTCTTGCCCATCAAAACTCATCTGGCTGAGATTATGTAAGATTTGAAAAAGATCACATACAATCTGATCTTTGTTTTGGCCGAGATTCCACCGAGAAACCCAATTTTTTTTTTTTTTAGTTTGAATCGACCAGGAAGGACCGAGAAAAAGTATTATAACAAATTGCTAAAAGGAGTACTGATCCGGAAGCACAAAAACACTTTGAGATTATTTCTGACAATTTTCCTATCAAAGTTGTGAGTACGAAACTATCAACAAACATGACTAGTTGATACTAAAACTATCTAACGAACTCTTTAATTCACTACATTGCAATGTGTGTAATGAGATTAGTTTTTACTTGACGGGTTTTCCTGTTGCTAAGGGAATGTGGTATCACCCAGTTGTGTTCTTCCATTGACTGAGGAAAATGTGGAGAAAGTTTTGGATGAAGTAAGGCCAGGGTTGATGGCTGATGGAGGGAATGTTGCTTTGCATGAGATAGATGGGCTTGTTGTGATATTGAAGCTTCAAGGAGCATGTGGTTCTTGTCCAAGCTCAACAATGACGCTCAAAATGGGAATTGAGACAAGACTTAGAGACAAAATTCCTGAAATTTTGGAAGTTGAGCAGATCATGGACACTGAAACAGGACTTGAACTCAACGAGGAAAATGTTGAAAAGGTTTGTTTCTCATTTTCAATGTTCTGCTATGTAGAAAGTAATTTTTTACATTTTAAAACACTTGCATAGATGATCATAGAATTGCTTTTGCAAGAAACAATTTTCAAACTTCAAGGAACAAAAGCGCCCATTTTGAAACTGTAGGGACCAAGGAGATACTTGGACCAAATTTGTATGTTGCGTTTACATTTTTAACCTCTCAACATATTTTTGATGTCATAAAGAATGAAACATATCAGGTACTTTCAGAAATTAGACCATACTTAGCAGGAACAGGAGGTGGAATCTTGGAAGTTATTGAGATAAAAGATTATGTGGTTAAGGTGCGGCTGAGCGGACCTGCAGCAGGGGTTATGACAGTTCGAGTTGCTCTCACACAGAAGTTGAGAGAGAAAATACCAGCCATTGCAGCAGTACAGCTTATAGAGTAGAATCAGCTTTGATTCGTAGATGCTGAGTTTAAACTTGTAACTTCTTCTCCACTTTCTTTTACTTCATAATCTTTTTTACAATTTTAATGAGATTGTTGTTATGGTAAGTAAATGTTAATATATATGAAGAGTTCTGTTTTGTTGGGA

mRNA sequence

CGTTTCTCCTTCCCAATTTCCATCCACATAATCTTTGGCATACACCATTGATGATCTTCATTCTTCATCTTCATCACTCAATCGCTGCGTTTCCCTTCAGCAAACCATAACATAAATCCCCATGGCCTAACTCAACTCTTTTCCTTCCACTTCCATTTCAATGGTGGCCACTTTCTCAACTCGAGCTCAACCTTTCAAATCAACTCCAATAGCTGCAACTCTCTATCGTTCACCCTCTCACCCAGCTTCACCTTCCTATTTATCTTTCTTCAAGAGTTCGTTCTTTAGAGGTCAGTTTTGTAGCCGGCACTTTCTTCGCTTCAATTCAAGTTGTACTCGGATACGTCATTTAGGGAATGTGGTATCACCCAGTTGTGTTCTTCCATTGACTGAGGAAAATGTGGAGAAAGTTTTGGATGAAGTAAGGCCAGGGTTGATGGCTGATGGAGGGAATGTTGCTTTGCATGAGATAGATGGGCTTGTTGTGATATTGAAGCTTCAAGGAGCATGTGGTTCTTGTCCAAGCTCAACAATGACGCTCAAAATGGGAATTGAGACAAGACTTAGAGACAAAATTCCTGAAATTTTGGAAGTTGAGCAGATCATGGACACTGAAACAGGACTTGAACTCAACGAGGAAAATGTTGAAAAGGTACTTTCAGAAATTAGACCATACTTAGCAGGAACAGGAGGTGGAATCTTGGAAGTTATTGAGATAAAAGATTATGTGGTTAAGGTGCGGCTGAGCGGACCTGCAGCAGGGGTTATGACAGTTCGAGTTGCTCTCACACAGAAGTTGAGAGAGAAAATACCAGCCATTGCAGCAGTACAGCTTATAGAGTAGAATCAGCTTTGATTCGTAGATGCTGAGTTTAAACTTGTAACTTCTTCTCCACTTTCTTTTACTTCATAATCTTTTTTACAATTTTAATGAGATTGTTGTTATGGTAAGTAAATGTTAATATATATGAAGAGTTCTGTTTTGTTGGGA

Coding sequence (CDS)

ATGGTGGCCACTTTCTCAACTCGAGCTCAACCTTTCAAATCAACTCCAATAGCTGCAACTCTCTATCGTTCACCCTCTCACCCAGCTTCACCTTCCTATTTATCTTTCTTCAAGAGTTCGTTCTTTAGAGGTCAGTTTTGTAGCCGGCACTTTCTTCGCTTCAATTCAAGTTGTACTCGGATACGTCATTTAGGGAATGTGGTATCACCCAGTTGTGTTCTTCCATTGACTGAGGAAAATGTGGAGAAAGTTTTGGATGAAGTAAGGCCAGGGTTGATGGCTGATGGAGGGAATGTTGCTTTGCATGAGATAGATGGGCTTGTTGTGATATTGAAGCTTCAAGGAGCATGTGGTTCTTGTCCAAGCTCAACAATGACGCTCAAAATGGGAATTGAGACAAGACTTAGAGACAAAATTCCTGAAATTTTGGAAGTTGAGCAGATCATGGACACTGAAACAGGACTTGAACTCAACGAGGAAAATGTTGAAAAGGTACTTTCAGAAATTAGACCATACTTAGCAGGAACAGGAGGTGGAATCTTGGAAGTTATTGAGATAAAAGATTATGTGGTTAAGGTGCGGCTGAGCGGACCTGCAGCAGGGGTTATGACAGTTCGAGTTGCTCTCACACAGAAGTTGAGAGAGAAAATACCAGCCATTGCAGCAGTACAGCTTATAGAGTAG

Protein sequence

MVATFSTRAQPFKSTPIAATLYRSPSHPASPSYLSFFKSSFFRGQFCSRHFLRFNSSCTRIRHLGNVVSPSCVLPLTEENVEKVLDEVRPGLMADGGNVALHEIDGLVVILKLQGACGSCPSSTMTLKMGIETRLRDKIPEILEVEQIMDTETGLELNEENVEKVLSEIRPYLAGTGGGILEVIEIKDYVVKVRLSGPAAGVMTVRVALTQKLREKIPAIAAVQLIE*

Homology

[Close]

BLAST of CsGy2G006360 vs. ExPASy Swiss-Prot
Match: Q84RQ7 (NifU-like protein 3, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=NIFU3 PE=2 SV=1)

HSP 1 Score: 266.2 bits (679), Expect = 3.5e-70
Identity = 142/192 (73.96%), Postives = 164/192 (85.42%), Query Frame = 0


Query: 39  SSFFRGQFCSRHF--LRFNSSCTRIRHLGNVVSPSCVLPLTEENVEKVLDEVRPGLMADG 98
           S+F RGQF   HF  L+      +    G+V   SCV+PLTEENVE+VLDEVRP LMADG
Sbjct: 48  STFLRGQFQRIHFSWLQHTRPLRKRTVFGHV---SCVMPLTEENVERVLDEVRPSLMADG 107

Query: 99  GNVALHEIDGLVVILKLQGACGSCPSSTMTLKMGIETRLRDKIPEILEVEQIMDTET-GL 158
           GNVALHEIDGLVV+LKLQGACGSCPSS+MTLKMGIE+RLRDKIPEI+ VEQ +++ET GL
Sbjct: 108 GNVALHEIDGLVVVLKLQGACGSCPSSSMTLKMGIESRLRDKIPEIMSVEQFLESETGGL 167

Query: 159 ELNEENVEKVLSEIRPYLAGTGGGILEVIEIKDYVVKVRLSGPAAGVMTVRVALTQKLRE 218
           ELN+EN+EKVLSE+RPYL+GTGGG LE++EI  YVVKVRL+GPAAGVMTVRVALTQKLRE
Sbjct: 168 ELNDENIEKVLSELRPYLSGTGGGGLELVEIDGYVVKVRLTGPAAGVMTVRVALTQKLRE 227

Query: 219 KIPAIAAVQLIE 228
            IP+I AVQL+E
Sbjct: 228 TIPSIGAVQLLE 236

[Close]

BLAST of CsGy2G006360 vs. ExPASy Swiss-Prot
Match: Q93W20 (NifU-like protein 2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=NIFU2 PE=1 SV=1)

HSP 1 Score: 235.7 bits (600), Expect = 5.1e-61
Identity = 123/178 (69.10%), Postives = 146/178 (82.02%), Query Frame = 0


Query: 51  FLRFNSSCTRIRHLGNVVSPSCVL--PLTEENVEKVLDEVRPGLMADGGNVALHEIDGLV 110
           FL       R + +  V +P  +L  PLTEENVE VLDE+RP LM+DGGNVALHEIDG +
Sbjct: 58  FLSSRQLFRRSKVVKAVATPDPILEVPLTEENVESVLDEIRPYLMSDGGNVALHEIDGNI 117

Query: 111 VILKLQGACGSCPSSTMTLKMGIETRLRDKIPEILEVEQIMDTETGLELNEENVEKVLSE 170
           V +KLQGACGSCPSSTMT+KMGIE RL +KIPEI+ VE + D ETGLELNEEN+EKVL E
Sbjct: 118 VRVKLQGACGSCPSSTMTMKMGIERRLMEKIPEIVAVEALPDEETGLELNEENIEKVLEE 177

Query: 171 IRPYLAGTGGGILEVIEIKDYVVKVRLSGPAAGVMTVRVALTQKLREKIPAIAAVQLI 227
           IRPYL GT  G L+++EI+D +VK+R++GPAAGVMTVRVA+TQKLREKIP+IAAVQLI
Sbjct: 178 IRPYLIGTADGSLDLVEIEDPIVKIRITGPAAGVMTVRVAVTQKLREKIPSIAAVQLI 235

[Close]

BLAST of CsGy2G006360 vs. ExPASy Swiss-Prot
Match: Q84LK7 (NifU-like protein 1, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=NIFU1 PE=1 SV=1)

HSP 1 Score: 204.1 bits (518), Expect = 1.6e-51
Identity = 124/227 (54.63%), Postives = 151/227 (66.52%), Query Frame = 0


Query: 14  STPIAATLYRSPSHPASPSYLSFFKSSFFRGQFCSRHFLRFNSSCTRIRHLGNVVSPSCV 73
           + P+AA    +PS   S S  + FK + +    C       +S  TR+    N   P  V
Sbjct: 5   TVPMAAAAAVAPSTTTSSS--ASFKVAAYAWSSCRSS----SSPATRLVAAPNHQRPPLV 64

Query: 74  --------------LPLTEENVEKVLDEVRPGLMADGGNVALHEIDGLVVILKLQGACGS 133
                         LPLT  NVE VLD+VRP L ADGG+VALHEI G VV LKLQGACGS
Sbjct: 65  VGAIAGLDPVTAVQLPLTAGNVESVLDQVRPYLTADGGDVALHEIAGNVVRLKLQGACGS 124

Query: 134 CPSSTMTLKMGIETRLRDKIPEILEVEQIMDTETGLELNEENVEKVLSEIRPYLAGTGGG 193
           CPSS +T+K GIE RL +KIP++  VE + D ETGLELNEENVEKVL+EIRPYLAGTGGG
Sbjct: 125 CPSSLITIKRGIERRLMEKIPDVAAVEPVTDKETGLELNEENVEKVLNEIRPYLAGTGGG 184

Query: 194 ILEVIEIKDYVVKVRLSGPAAGVMTVRVALTQKLREKIPAIAAVQLI 227
            L+ + IK  +VKVRL+GPAA V TVR+A+++KLREKIP+I  VQL+
Sbjct: 185 GLQFLMIKGPIVKVRLTGPAAVVRTVRIAVSKKLREKIPSIQIVQLL 225

[Close]

BLAST of CsGy2G006360 vs. ExPASy Swiss-Prot
Match: Q93W77 (NifU-like protein 1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=NIFU1 PE=1 SV=1)

HSP 1 Score: 94.4 bits (233), Expect = 1.8e-18
Identity = 55/141 (39.01%), Postives = 88/141 (62.41%), Query Frame = 0


Query: 76  LTEENVEKVLDEVRPGLMADGGNVALHEIDGLVVILKLQGACGSCPSSTMTLKMGIETRL 135
           LT +NV+ VL++VRP L++DGGNV +  ++  VV LKLQGAC SCPSS+ T+ MGIE  L
Sbjct: 85  LTPQNVDLVLEDVRPFLISDGGNVDVVSVEDGVVSLKLQGACTSCPSSSTTMTMGIERVL 144

Query: 136 RDKIPEIL-EVEQIMDTETGLELNEENVEKVLSEIRPYLAGTGGGILEVIEIKDYVVKVR 195
           ++K  + L ++ Q+ D E   ++  E V   L  +RP +   GG + EV+ ++     V+
Sbjct: 145 KEKFGDALKDIRQVFDEEV-KQITVEAVNAHLDILRPAIKNYGGSV-EVLSVEGEDCVVK 204

Query: 196 LSGPAAGVMTVRVALTQKLRE 216
             GP +  M ++ A+ +K ++
Sbjct: 205 YVGPESIGMGIQAAIKEKFKD 223

[Close]

BLAST of CsGy2G006360 vs. ExPASy Swiss-Prot
Match: P33179 (Nitrogen fixation protein NifU (Fragment) OS=Anabaena sp. (strain L31) OX=29412 GN=nifU PE=3 SV=1)

HSP 1 Score: 84.3 bits (207), Expect = 1.9e-15
Identity = 43/69 (62.32%), Postives = 56/69 (81.16%), Query Frame = 0


Query: 81  VEKVLD-EVRPGLMADGGNVALHEIDGLVVILKLQGACGSCPSSTMTLKMGIETRLRDKI 140
           ++KVLD EVRP L+ADGG+V L+++DG +V + LQGACGSCPSST TLK+ IE+RLRD+I
Sbjct: 44  IQKVLDEEVRPVLIADGGDVELYDVDGDIVKVVLQGACGSCPSSTATLKIAIESRLRDRI 103

Query: 141 PEILEVEQI 149
              L VE +
Sbjct: 104 NPSLVVEAV 112

[Close]

BLAST of CsGy2G006360 vs. NCBI nr
Match: XP_004148324.1 (nifU-like protein 3, chloroplastic isoform X2 [Cucumis sativus] >KGN61156.1 hypothetical protein Csa_021276 [Cucumis sativus])

HSP 1 Score: 438 bits (1126), Expect = 1.22e-154
Identity = 227/227 (100.00%), Postives = 227/227 (100.00%), Query Frame = 0


Query: 1   MVATFSTRAQPFKSTPIAATLYRSPSHPASPSYLSFFKSSFFRGQFCSRHFLRFNSSCTR 60
           MVATFSTRAQPFKSTPIAATLYRSPSHPASPSYLSFFKSSFFRGQFCSRHFLRFNSSCTR
Sbjct: 1   MVATFSTRAQPFKSTPIAATLYRSPSHPASPSYLSFFKSSFFRGQFCSRHFLRFNSSCTR 60

Query: 61  IRHLGNVVSPSCVLPLTEENVEKVLDEVRPGLMADGGNVALHEIDGLVVILKLQGACGSC 120
           IRHLGNVVSPSCVLPLTEENVEKVLDEVRPGLMADGGNVALHEIDGLVVILKLQGACGSC
Sbjct: 61  IRHLGNVVSPSCVLPLTEENVEKVLDEVRPGLMADGGNVALHEIDGLVVILKLQGACGSC 120

Query: 121 PSSTMTLKMGIETRLRDKIPEILEVEQIMDTETGLELNEENVEKVLSEIRPYLAGTGGGI 180
           PSSTMTLKMGIETRLRDKIPEILEVEQIMDTETGLELNEENVEKVLSEIRPYLAGTGGGI
Sbjct: 121 PSSTMTLKMGIETRLRDKIPEILEVEQIMDTETGLELNEENVEKVLSEIRPYLAGTGGGI 180

Query: 181 LEVIEIKDYVVKVRLSGPAAGVMTVRVALTQKLREKIPAIAAVQLIE 227
           LEVIEIKDYVVKVRLSGPAAGVMTVRVALTQKLREKIPAIAAVQLIE
Sbjct: 181 LEVIEIKDYVVKVRLSGPAAGVMTVRVALTQKLREKIPAIAAVQLIE 227

[Close]

BLAST of CsGy2G006360 vs. NCBI nr
Match: XP_031737073.1 (nifU-like protein 3, chloroplastic isoform X1 [Cucumis sativus])

HSP 1 Score: 432 bits (1110), Expect = 4.02e-152
Identity = 227/232 (97.84%), Postives = 227/232 (97.84%), Query Frame = 0


Query: 1   MVATFSTRAQPFKSTPIAATLYRSPSHPASPSYLSFFKSSFFRGQFCSRHFLRFNSSCTR 60
           MVATFSTRAQPFKSTPIAATLYRSPSHPASPSYLSFFKSSFFRGQFCSRHFLRFNSSCTR
Sbjct: 1   MVATFSTRAQPFKSTPIAATLYRSPSHPASPSYLSFFKSSFFRGQFCSRHFLRFNSSCTR 60

Query: 61  IRHLGNVVSPSCVLPLTEENVEKVLDEVRPGLMADGGNVALHEIDGLVVILKLQGACGSC 120
           IRHLGNVVSPSCVLPLTEENVEKVLDEVRPGLMADGGNVALHEIDGLVVILKLQGACGSC
Sbjct: 61  IRHLGNVVSPSCVLPLTEENVEKVLDEVRPGLMADGGNVALHEIDGLVVILKLQGACGSC 120

Query: 121 PSSTMTLKMGIETRLRDKIPEILEVEQIMDTETGLELNEENVEK-----VLSEIRPYLAG 180
           PSSTMTLKMGIETRLRDKIPEILEVEQIMDTETGLELNEENVEK     VLSEIRPYLAG
Sbjct: 121 PSSTMTLKMGIETRLRDKIPEILEVEQIMDTETGLELNEENVEKNETYQVLSEIRPYLAG 180

Query: 181 TGGGILEVIEIKDYVVKVRLSGPAAGVMTVRVALTQKLREKIPAIAAVQLIE 227
           TGGGILEVIEIKDYVVKVRLSGPAAGVMTVRVALTQKLREKIPAIAAVQLIE
Sbjct: 181 TGGGILEVIEIKDYVVKVRLSGPAAGVMTVRVALTQKLREKIPAIAAVQLIE 232

[Close]

BLAST of CsGy2G006360 vs. NCBI nr
Match: TYK01397.1 (nifU-like protein 3 [Cucumis melo var. makuwa])

HSP 1 Score: 416 bits (1069), Expect = 5.96e-146
Identity = 218/227 (96.04%), Postives = 219/227 (96.48%), Query Frame = 0


Query: 1   MVATFSTRAQPFKSTPIAATLYRSPSHPASPSYLSFFKSSFFRGQFCSRHFLRFNSSCTR 60
           MVATFSTRAQPFKSTPIAATLY S SHP SPS+LS FKSSFFRGQFCSR FLRFN SCTR
Sbjct: 1   MVATFSTRAQPFKSTPIAATLYPSSSHPTSPSHLSLFKSSFFRGQFCSRRFLRFNPSCTR 60

Query: 61  IRHLGNVVSPSCVLPLTEENVEKVLDEVRPGLMADGGNVALHEIDGLVVILKLQGACGSC 120
           IR LGNVVSPSCVLPLTEENVEKVLDEVRP LMADGGNVALHEIDGLVVILKLQGACGSC
Sbjct: 61  IRRLGNVVSPSCVLPLTEENVEKVLDEVRPSLMADGGNVALHEIDGLVVILKLQGACGSC 120

Query: 121 PSSTMTLKMGIETRLRDKIPEILEVEQIMDTETGLELNEENVEKVLSEIRPYLAGTGGGI 180
           PSSTMTLKMGIETRLRDKIPEILEVEQIMDTETGLELNEENVEKVLSEIRPYLAGTGGGI
Sbjct: 121 PSSTMTLKMGIETRLRDKIPEILEVEQIMDTETGLELNEENVEKVLSEIRPYLAGTGGGI 180

Query: 181 LEVIEIKDYVVKVRLSGPAAGVMTVRVALTQKLREKIPAIAAVQLIE 227
           LEVIEIKDYVVKVRLSGPAAGVMTVRVALTQKLREKIPAIAAVQLIE
Sbjct: 181 LEVIEIKDYVVKVRLSGPAAGVMTVRVALTQKLREKIPAIAAVQLIE 227

[Close]

BLAST of CsGy2G006360 vs. NCBI nr
Match: XP_008451517.1 (PREDICTED: nifU-like protein 3, chloroplastic [Cucumis melo] >KAA0048619.1 nifU-like protein 3 [Cucumis melo var. makuwa])

HSP 1 Score: 416 bits (1068), Expect = 8.47e-146
Identity = 217/227 (95.59%), Postives = 219/227 (96.48%), Query Frame = 0


Query: 1   MVATFSTRAQPFKSTPIAATLYRSPSHPASPSYLSFFKSSFFRGQFCSRHFLRFNSSCTR 60
           MVATFSTRAQPFKSTPIAATLY S SHP SPS+LS FKSSFFRGQFCSR FLRFN SCTR
Sbjct: 1   MVATFSTRAQPFKSTPIAATLYPSSSHPTSPSHLSLFKSSFFRGQFCSRRFLRFNPSCTR 60

Query: 61  IRHLGNVVSPSCVLPLTEENVEKVLDEVRPGLMADGGNVALHEIDGLVVILKLQGACGSC 120
           IR LGNV+SPSCVLPLTEENVEKVLDEVRP LMADGGNVALHEIDGLVVILKLQGACGSC
Sbjct: 61  IRRLGNVISPSCVLPLTEENVEKVLDEVRPSLMADGGNVALHEIDGLVVILKLQGACGSC 120

Query: 121 PSSTMTLKMGIETRLRDKIPEILEVEQIMDTETGLELNEENVEKVLSEIRPYLAGTGGGI 180
           PSSTMTLKMGIETRLRDKIPEILEVEQIMDTETGLELNEENVEKVLSEIRPYLAGTGGGI
Sbjct: 121 PSSTMTLKMGIETRLRDKIPEILEVEQIMDTETGLELNEENVEKVLSEIRPYLAGTGGGI 180

Query: 181 LEVIEIKDYVVKVRLSGPAAGVMTVRVALTQKLREKIPAIAAVQLIE 227
           LEVIEIKDYVVKVRLSGPAAGVMTVRVALTQKLREKIPAIAAVQLIE
Sbjct: 181 LEVIEIKDYVVKVRLSGPAAGVMTVRVALTQKLREKIPAIAAVQLIE 227

[Close]

BLAST of CsGy2G006360 vs. NCBI nr
Match: XP_038889481.1 (nifU-like protein 3, chloroplastic [Benincasa hispida])

HSP 1 Score: 408 bits (1048), Expect = 9.46e-143
Identity = 213/227 (93.83%), Postives = 217/227 (95.59%), Query Frame = 0


Query: 1   MVATFSTRAQPFKSTPIAATLYRSPSHPASPSYLSFFKSSFFRGQFCSRHFLRFNSSCTR 60
           MVA FSTRA P KSTPIAATLY SPS P SPS+LS FK+SFFRGQFCSR FLRFNSSCT+
Sbjct: 1   MVAAFSTRAHPLKSTPIAATLYCSPSEPTSPSHLSLFKTSFFRGQFCSRRFLRFNSSCTQ 60

Query: 61  IRHLGNVVSPSCVLPLTEENVEKVLDEVRPGLMADGGNVALHEIDGLVVILKLQGACGSC 120
            RHLGNVVSPSCVLPLTEENVEKVLDEVRP LMADGGNVALHEIDGLVVILKLQGACGSC
Sbjct: 61  RRHLGNVVSPSCVLPLTEENVEKVLDEVRPSLMADGGNVALHEIDGLVVILKLQGACGSC 120

Query: 121 PSSTMTLKMGIETRLRDKIPEILEVEQIMDTETGLELNEENVEKVLSEIRPYLAGTGGGI 180
           PSSTMTLKMGIETRLRDKIPEILEVEQIMDTETGLELNEENVEKVL+EIRPYLAGTGGGI
Sbjct: 121 PSSTMTLKMGIETRLRDKIPEILEVEQIMDTETGLELNEENVEKVLAEIRPYLAGTGGGI 180

Query: 181 LEVIEIKDYVVKVRLSGPAAGVMTVRVALTQKLREKIPAIAAVQLIE 227
           LEVIEIKDYVVKVRLSGPAAGVMTVRVALTQKLREKIPAIAAVQLIE
Sbjct: 181 LEVIEIKDYVVKVRLSGPAAGVMTVRVALTQKLREKIPAIAAVQLIE 227

[Close]

BLAST of CsGy2G006360 vs. ExPASy TrEMBL
Match: A0A0A0LMF5 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G060370 PE=3 SV=1)

HSP 1 Score: 438 bits (1126), Expect = 5.90e-155
Identity = 227/227 (100.00%), Postives = 227/227 (100.00%), Query Frame = 0


Query: 1   MVATFSTRAQPFKSTPIAATLYRSPSHPASPSYLSFFKSSFFRGQFCSRHFLRFNSSCTR 60
           MVATFSTRAQPFKSTPIAATLYRSPSHPASPSYLSFFKSSFFRGQFCSRHFLRFNSSCTR
Sbjct: 1   MVATFSTRAQPFKSTPIAATLYRSPSHPASPSYLSFFKSSFFRGQFCSRHFLRFNSSCTR 60

Query: 61  IRHLGNVVSPSCVLPLTEENVEKVLDEVRPGLMADGGNVALHEIDGLVVILKLQGACGSC 120
           IRHLGNVVSPSCVLPLTEENVEKVLDEVRPGLMADGGNVALHEIDGLVVILKLQGACGSC
Sbjct: 61  IRHLGNVVSPSCVLPLTEENVEKVLDEVRPGLMADGGNVALHEIDGLVVILKLQGACGSC 120

Query: 121 PSSTMTLKMGIETRLRDKIPEILEVEQIMDTETGLELNEENVEKVLSEIRPYLAGTGGGI 180
           PSSTMTLKMGIETRLRDKIPEILEVEQIMDTETGLELNEENVEKVLSEIRPYLAGTGGGI
Sbjct: 121 PSSTMTLKMGIETRLRDKIPEILEVEQIMDTETGLELNEENVEKVLSEIRPYLAGTGGGI 180

Query: 181 LEVIEIKDYVVKVRLSGPAAGVMTVRVALTQKLREKIPAIAAVQLIE 227
           LEVIEIKDYVVKVRLSGPAAGVMTVRVALTQKLREKIPAIAAVQLIE
Sbjct: 181 LEVIEIKDYVVKVRLSGPAAGVMTVRVALTQKLREKIPAIAAVQLIE 227

[Close]

BLAST of CsGy2G006360 vs. ExPASy TrEMBL
Match: A0A5D3BPX3 (NifU-like protein 3 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold29G00910 PE=3 SV=1)

HSP 1 Score: 416 bits (1069), Expect = 2.89e-146
Identity = 218/227 (96.04%), Postives = 219/227 (96.48%), Query Frame = 0


Query: 1   MVATFSTRAQPFKSTPIAATLYRSPSHPASPSYLSFFKSSFFRGQFCSRHFLRFNSSCTR 60
           MVATFSTRAQPFKSTPIAATLY S SHP SPS+LS FKSSFFRGQFCSR FLRFN SCTR
Sbjct: 1   MVATFSTRAQPFKSTPIAATLYPSSSHPTSPSHLSLFKSSFFRGQFCSRRFLRFNPSCTR 60

Query: 61  IRHLGNVVSPSCVLPLTEENVEKVLDEVRPGLMADGGNVALHEIDGLVVILKLQGACGSC 120
           IR LGNVVSPSCVLPLTEENVEKVLDEVRP LMADGGNVALHEIDGLVVILKLQGACGSC
Sbjct: 61  IRRLGNVVSPSCVLPLTEENVEKVLDEVRPSLMADGGNVALHEIDGLVVILKLQGACGSC 120

Query: 121 PSSTMTLKMGIETRLRDKIPEILEVEQIMDTETGLELNEENVEKVLSEIRPYLAGTGGGI 180
           PSSTMTLKMGIETRLRDKIPEILEVEQIMDTETGLELNEENVEKVLSEIRPYLAGTGGGI
Sbjct: 121 PSSTMTLKMGIETRLRDKIPEILEVEQIMDTETGLELNEENVEKVLSEIRPYLAGTGGGI 180

Query: 181 LEVIEIKDYVVKVRLSGPAAGVMTVRVALTQKLREKIPAIAAVQLIE 227
           LEVIEIKDYVVKVRLSGPAAGVMTVRVALTQKLREKIPAIAAVQLIE
Sbjct: 181 LEVIEIKDYVVKVRLSGPAAGVMTVRVALTQKLREKIPAIAAVQLIE 227

[Close]

BLAST of CsGy2G006360 vs. ExPASy TrEMBL
Match: A0A5A7U598 (NifU-like protein 3 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold1484G00030 PE=3 SV=1)

HSP 1 Score: 416 bits (1068), Expect = 4.10e-146
Identity = 217/227 (95.59%), Postives = 219/227 (96.48%), Query Frame = 0


Query: 1   MVATFSTRAQPFKSTPIAATLYRSPSHPASPSYLSFFKSSFFRGQFCSRHFLRFNSSCTR 60
           MVATFSTRAQPFKSTPIAATLY S SHP SPS+LS FKSSFFRGQFCSR FLRFN SCTR
Sbjct: 1   MVATFSTRAQPFKSTPIAATLYPSSSHPTSPSHLSLFKSSFFRGQFCSRRFLRFNPSCTR 60

Query: 61  IRHLGNVVSPSCVLPLTEENVEKVLDEVRPGLMADGGNVALHEIDGLVVILKLQGACGSC 120
           IR LGNV+SPSCVLPLTEENVEKVLDEVRP LMADGGNVALHEIDGLVVILKLQGACGSC
Sbjct: 61  IRRLGNVISPSCVLPLTEENVEKVLDEVRPSLMADGGNVALHEIDGLVVILKLQGACGSC 120

Query: 121 PSSTMTLKMGIETRLRDKIPEILEVEQIMDTETGLELNEENVEKVLSEIRPYLAGTGGGI 180
           PSSTMTLKMGIETRLRDKIPEILEVEQIMDTETGLELNEENVEKVLSEIRPYLAGTGGGI
Sbjct: 121 PSSTMTLKMGIETRLRDKIPEILEVEQIMDTETGLELNEENVEKVLSEIRPYLAGTGGGI 180

Query: 181 LEVIEIKDYVVKVRLSGPAAGVMTVRVALTQKLREKIPAIAAVQLIE 227
           LEVIEIKDYVVKVRLSGPAAGVMTVRVALTQKLREKIPAIAAVQLIE
Sbjct: 181 LEVIEIKDYVVKVRLSGPAAGVMTVRVALTQKLREKIPAIAAVQLIE 227

[Close]

BLAST of CsGy2G006360 vs. ExPASy TrEMBL
Match: A0A1S3BRP8 (nifU-like protein 3, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103492775 PE=3 SV=1)

HSP 1 Score: 416 bits (1068), Expect = 4.10e-146
Identity = 217/227 (95.59%), Postives = 219/227 (96.48%), Query Frame = 0


Query: 1   MVATFSTRAQPFKSTPIAATLYRSPSHPASPSYLSFFKSSFFRGQFCSRHFLRFNSSCTR 60
           MVATFSTRAQPFKSTPIAATLY S SHP SPS+LS FKSSFFRGQFCSR FLRFN SCTR
Sbjct: 1   MVATFSTRAQPFKSTPIAATLYPSSSHPTSPSHLSLFKSSFFRGQFCSRRFLRFNPSCTR 60

Query: 61  IRHLGNVVSPSCVLPLTEENVEKVLDEVRPGLMADGGNVALHEIDGLVVILKLQGACGSC 120
           IR LGNV+SPSCVLPLTEENVEKVLDEVRP LMADGGNVALHEIDGLVVILKLQGACGSC
Sbjct: 61  IRRLGNVISPSCVLPLTEENVEKVLDEVRPSLMADGGNVALHEIDGLVVILKLQGACGSC 120

Query: 121 PSSTMTLKMGIETRLRDKIPEILEVEQIMDTETGLELNEENVEKVLSEIRPYLAGTGGGI 180
           PSSTMTLKMGIETRLRDKIPEILEVEQIMDTETGLELNEENVEKVLSEIRPYLAGTGGGI
Sbjct: 121 PSSTMTLKMGIETRLRDKIPEILEVEQIMDTETGLELNEENVEKVLSEIRPYLAGTGGGI 180

Query: 181 LEVIEIKDYVVKVRLSGPAAGVMTVRVALTQKLREKIPAIAAVQLIE 227
           LEVIEIKDYVVKVRLSGPAAGVMTVRVALTQKLREKIPAIAAVQLIE
Sbjct: 181 LEVIEIKDYVVKVRLSGPAAGVMTVRVALTQKLREKIPAIAAVQLIE 227

[Close]

BLAST of CsGy2G006360 vs. ExPASy TrEMBL
Match: A0A6J1EP39 (nifU-like protein 3, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111436107 PE=3 SV=1)

HSP 1 Score: 393 bits (1010), Expect = 2.83e-137
Identity = 206/227 (90.75%), Postives = 212/227 (93.39%), Query Frame = 0


Query: 1   MVATFSTRAQPFKSTPIAATLYRSPSHPASPSYLSFFKSSFFRGQFCSRHFLRFNSSCTR 60
           MVA FSTRAQ  K TP  ATLYRSPS   S S+LSFFKSSFFRGQFCSR FL FNSSCTR
Sbjct: 1   MVAAFSTRAQALKPTPTTATLYRSPSERTSASHLSFFKSSFFRGQFCSRRFLGFNSSCTR 60

Query: 61  IRHLGNVVSPSCVLPLTEENVEKVLDEVRPGLMADGGNVALHEIDGLVVILKLQGACGSC 120
            RHLGNVVSPSCVLPLTEENVEKVLDEVRP LMADGGNVALHEIDGLVVILKLQGACGSC
Sbjct: 61  RRHLGNVVSPSCVLPLTEENVEKVLDEVRPSLMADGGNVALHEIDGLVVILKLQGACGSC 120

Query: 121 PSSTMTLKMGIETRLRDKIPEILEVEQIMDTETGLELNEENVEKVLSEIRPYLAGTGGGI 180
           PSSTMTLKMGIETRLRDKIPEILEVEQI+DTETGLELN +NVEK+L+EIRPYLAGTGGGI
Sbjct: 121 PSSTMTLKMGIETRLRDKIPEILEVEQIIDTETGLELNHDNVEKLLAEIRPYLAGTGGGI 180

Query: 181 LEVIEIKDYVVKVRLSGPAAGVMTVRVALTQKLREKIPAIAAVQLIE 227
           LE+IEIKDYVVKVRLSGPAAGVMTVRVALTQKLREKIPAIAAVQLIE
Sbjct: 181 LELIEIKDYVVKVRLSGPAAGVMTVRVALTQKLREKIPAIAAVQLIE 227

[Close]

BLAST of CsGy2G006360 vs. TAIR 10
Match: AT4G25910.1 (NFU domain protein 3 )

HSP 1 Score: 266.2 bits (679), Expect = 2.5e-71
Identity = 142/192 (73.96%), Postives = 164/192 (85.42%), Query Frame = 0


Query: 39  SSFFRGQFCSRHF--LRFNSSCTRIRHLGNVVSPSCVLPLTEENVEKVLDEVRPGLMADG 98
           S+F RGQF   HF  L+      +    G+V   SCV+PLTEENVE+VLDEVRP LMADG
Sbjct: 48  STFLRGQFQRIHFSWLQHTRPLRKRTVFGHV---SCVMPLTEENVERVLDEVRPSLMADG 107

Query: 99  GNVALHEIDGLVVILKLQGACGSCPSSTMTLKMGIETRLRDKIPEILEVEQIMDTET-GL 158
           GNVALHEIDGLVV+LKLQGACGSCPSS+MTLKMGIE+RLRDKIPEI+ VEQ +++ET GL
Sbjct: 108 GNVALHEIDGLVVVLKLQGACGSCPSSSMTLKMGIESRLRDKIPEIMSVEQFLESETGGL 167

Query: 159 ELNEENVEKVLSEIRPYLAGTGGGILEVIEIKDYVVKVRLSGPAAGVMTVRVALTQKLRE 218
           ELN+EN+EKVLSE+RPYL+GTGGG LE++EI  YVVKVRL+GPAAGVMTVRVALTQKLRE
Sbjct: 168 ELNDENIEKVLSELRPYLSGTGGGGLELVEIDGYVVKVRLTGPAAGVMTVRVALTQKLRE 227

Query: 219 KIPAIAAVQLIE 228
            IP+I AVQL+E
Sbjct: 228 TIPSIGAVQLLE 236

[Close]

BLAST of CsGy2G006360 vs. TAIR 10
Match: AT5G49940.1 (NIFU-like protein 2 )

HSP 1 Score: 235.7 bits (600), Expect = 3.6e-62
Identity = 123/178 (69.10%), Postives = 146/178 (82.02%), Query Frame = 0


Query: 51  FLRFNSSCTRIRHLGNVVSPSCVL--PLTEENVEKVLDEVRPGLMADGGNVALHEIDGLV 110
           FL       R + +  V +P  +L  PLTEENVE VLDE+RP LM+DGGNVALHEIDG +
Sbjct: 58  FLSSRQLFRRSKVVKAVATPDPILEVPLTEENVESVLDEIRPYLMSDGGNVALHEIDGNI 117

Query: 111 VILKLQGACGSCPSSTMTLKMGIETRLRDKIPEILEVEQIMDTETGLELNEENVEKVLSE 170
           V +KLQGACGSCPSSTMT+KMGIE RL +KIPEI+ VE + D ETGLELNEEN+EKVL E
Sbjct: 118 VRVKLQGACGSCPSSTMTMKMGIERRLMEKIPEIVAVEALPDEETGLELNEENIEKVLEE 177

Query: 171 IRPYLAGTGGGILEVIEIKDYVVKVRLSGPAAGVMTVRVALTQKLREKIPAIAAVQLI 227
           IRPYL GT  G L+++EI+D +VK+R++GPAAGVMTVRVA+TQKLREKIP+IAAVQLI
Sbjct: 178 IRPYLIGTADGSLDLVEIEDPIVKIRITGPAAGVMTVRVAVTQKLREKIPSIAAVQLI 235

[Close]

BLAST of CsGy2G006360 vs. TAIR 10
Match: AT5G49940.2 (NIFU-like protein 2 )

HSP 1 Score: 148.7 bits (374), Expect = 5.8e-36
Identity = 78/117 (66.67%), Postives = 91/117 (77.78%), Query Frame = 0


Query: 51  FLRFNSSCTRIRHLGNVVSPSCVL--PLTEENVEKVLDEVRPGLMADGGNVALHEIDGLV 110
           FL       R + +  V +P  +L  PLTEENVE VLDE+RP LM+DGGNVALHEIDG +
Sbjct: 58  FLSSRQLFRRSKVVKAVATPDPILEVPLTEENVESVLDEIRPYLMSDGGNVALHEIDGNI 117

Query: 111 VILKLQGACGSCPSSTMTLKMGIETRLRDKIPEILEVEQIMDTETGLELNEENVEKV 166
           V +KLQGACGSCPSSTMT+KMGIE RL +KIPEI+ VE + D ETGLELNEEN+EKV
Sbjct: 118 VRVKLQGACGSCPSSTMTMKMGIERRLMEKIPEIVAVEALPDEETGLELNEENIEKV 174

[Close]

BLAST of CsGy2G006360 vs. TAIR 10
Match: AT4G01940.1 (NFU domain protein 1 )

HSP 1 Score: 94.4 bits (233), Expect = 1.3e-19
Identity = 55/141 (39.01%), Postives = 88/141 (62.41%), Query Frame = 0


Query: 76  LTEENVEKVLDEVRPGLMADGGNVALHEIDGLVVILKLQGACGSCPSSTMTLKMGIETRL 135
           LT +NV+ VL++VRP L++DGGNV +  ++  VV LKLQGAC SCPSS+ T+ MGIE  L
Sbjct: 85  LTPQNVDLVLEDVRPFLISDGGNVDVVSVEDGVVSLKLQGACTSCPSSSTTMTMGIERVL 144

Query: 136 RDKIPEIL-EVEQIMDTETGLELNEENVEKVLSEIRPYLAGTGGGILEVIEIKDYVVKVR 195
           ++K  + L ++ Q+ D E   ++  E V   L  +RP +   GG + EV+ ++     V+
Sbjct: 145 KEKFGDALKDIRQVFDEEV-KQITVEAVNAHLDILRPAIKNYGGSV-EVLSVEGEDCVVK 204

Query: 196 LSGPAAGVMTVRVALTQKLRE 216
             GP +  M ++ A+ +K ++
Sbjct: 205 YVGPESIGMGIQAAIKEKFKD 223

[Close]

BLAST of CsGy2G006360 vs. TAIR 10
Match: AT3G20970.1 (NFU domain protein 4 )

HSP 1 Score: 55.1 bits (131), Expect = 8.7e-08
Identity = 29/67 (43.28%), Postives = 40/67 (59.70%), Query Frame = 0


Query: 88  VRPGLMADGGNVALHEID--GLVVILKLQGACGSCPSSTMTLKMGIETRLRDKIPEILEV 147
           +RP +  DGG++     D    +V L++QGAC  CPSS++TLK GIE  L   + E+  V
Sbjct: 204 IRPAVQDDGGDIEYCGFDPESGIVKLRMQGACSGCPSSSVTLKSGIENMLMHYVSEVKGV 263

Query: 148 EQIMDTE 153
           EQ  D E
Sbjct: 264 EQEFDGE 270

The following BLAST results are available for this feature:

BLAST of CsGy2G006360 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q84RQ7	3.5e-70	73.96	NifU-like protein 3, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=NIFU3 PE=2...	[more]
Q93W20	5.1e-61	69.10	NifU-like protein 2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=NIFU2 PE=1...	[more]
Q84LK7	1.6e-51	54.63	NifU-like protein 1, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=N...	[more]
Q93W77	1.8e-18	39.01	NifU-like protein 1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=NIFU1 PE=1...	[more]
P33179	1.9e-15	62.32	Nitrogen fixation protein NifU (Fragment) OS=Anabaena sp. (strain L31) OX=29412 ...	[more]

BLAST of CsGy2G006360 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004148324.1	1.22e-154	100.00	nifU-like protein 3, chloroplastic isoform X2 [Cucumis sativus] >KGN61156.1 hypo...	[more]
XP_031737073.1	4.02e-152	97.84	nifU-like protein 3, chloroplastic isoform X1 [Cucumis sativus]	[more]
TYK01397.1	5.96e-146	96.04	nifU-like protein 3 [Cucumis melo var. makuwa]	[more]
XP_008451517.1	8.47e-146	95.59	PREDICTED: nifU-like protein 3, chloroplastic [Cucumis melo] >KAA0048619.1 nifU-...	[more]
XP_038889481.1	9.46e-143	93.83	nifU-like protein 3, chloroplastic [Benincasa hispida]	[more]

BLAST of CsGy2G006360 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LMF5	5.90e-155	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G060370 PE=3 SV=1	[more]
A0A5D3BPX3	2.89e-146	96.04	NifU-like protein 3 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold29G0...	[more]
A0A5A7U598	4.10e-146	95.59	NifU-like protein 3 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold1484...	[more]
A0A1S3BRP8	4.10e-146	95.59	nifU-like protein 3, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103492775 PE=3 ...	[more]
A0A6J1EP39	2.83e-137	90.75	nifU-like protein 3, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111436107...	[more]

BLAST of CsGy2G006360 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G25910.1	2.5e-71	73.96	NFU domain protein 3	[more]
AT5G49940.1	3.6e-62	69.10	NIFU-like protein 2	[more]
AT5G49940.2	5.8e-36	66.67	NIFU-like protein 2	[more]
AT4G01940.1	1.3e-19	39.01	NFU domain protein 1	[more]
AT3G20970.1	8.7e-08	43.28	NFU domain protein 4	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (Gy14) v2.1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001075	NIF system FeS cluster assembly, NifU, C-terminal	PFAM	PF01106	NifU	coord: 162..224 e-value: 3.7E-12 score: 46.2 coord: 81..146 e-value: 3.3E-26 score: 91.3
IPR034904	Fe-S cluster assembly domain superfamily	GENE3D	3.30.300.130		coord: 73..155 e-value: 3.9E-32 score: 112.1
IPR034904	Fe-S cluster assembly domain superfamily	GENE3D	3.30.300.130		coord: 156..227 e-value: 4.8E-22 score: 79.9
IPR034904	Fe-S cluster assembly domain superfamily	SUPERFAMILY	117916	Fe-S cluster assembly (FSCA) domain-like	coord: 78..153
IPR034904	Fe-S cluster assembly domain superfamily	SUPERFAMILY	117916	Fe-S cluster assembly (FSCA) domain-like	coord: 156..226
None	No IPR available	PANTHER	PTHR11178	IRON-SULFUR CLUSTER SCAFFOLD PROTEIN NFU-RELATED	coord: 31..227
None	No IPR available	PANTHER	PTHR11178:SF25	NIFU-LIKE PROTEIN 3, CHLOROPLASTIC	coord: 31..227

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsGy2G006360.2	CsGy2G006360.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0016226	iron-sulfur cluster assembly
biological_process	GO:0097428	protein maturation by iron-sulfur cluster transfer
cellular_component	GO:0005739	mitochondrion
molecular_function	GO:0051539	4 iron, 4 sulfur cluster binding
molecular_function	GO:0005506	iron ion binding
molecular_function	GO:0051536	iron-sulfur cluster binding