CsGy2G006090 (gene) Cucumber (Gy14) v2.1

Overview


Name	CsGy2G006090
Type	gene
Organism	Cucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
Description	Chlorophyll A-B binding protein
Location	Gy14Chr2: 4426367 .. 4432263 (-)
RNA-Seq Expression	CsGy2G006090
Synteny	CsGy2G006090

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CAAATTTAAATGAGTAAAGCGACTGAAAATTTAGGGGAAAGCACAATTTCGAGTCAACCAATTCAATTTCATTTCATTCTAATATGGTGGAGGCAAGCAATATTAGATATATCCGTTTGATTGGATTAGAACAAGCTCTGTACAGCCATCAGTGAGCGTCATTGCACAAATGTCATTCTCTATAAGATAATGTGTTGATGTGGGCATCTCAAATCTATAAATGGATAAGCATTCATGCAGGAAGGCGTTGCACTTTGGACATGGCTGCTGCTTCCACTGCGCTGATTCTCCCCATCAATGGAGGAAACCTTCCGCCTTCCCAATACCTCTCTTTTCGCCATACTCTCCCTTCTGCTACTTTCTCCAGGTAATTTCGCCTTCTTCCTCAGATACCCATTTCTCCAATCGATCTAATTCATGGGGTTTCCCCCTTTTTCGTACCATGTGGATTCTATCTTTGTAATTGGGATTCTTTTCTTGCTTTTCAAGGACGATGGGTTTCTATGTTAATTTGGGGATTTGTGTCTAAACTTTTATATGTTGTCAAACTCTTTGCTCCAATTGGTGTTTGATGGTTTCTGGAAAATGTTACAAGTTACAGAGTGATGAATAGAAGCTTCTCTTTTCTTCTCTCTCTCTCTCTCTTTTTGTCATTAGAGTTTGGATTGCTCTGAGACGTTTTGGAATTATTGAGTTCCTTGCTCTGGTTATTGGTTAACGCATTTAGTTTTGTAAACATGATCTTGGAATCTTTTGTAGCCGATCATTAGTATTTTGTTTTGTTTGAATACACATCCTCTGATAACTTTCACCTTTTTCGACACCTTGGCTTTCCAAATGATATCAACAAAGATCCGGTCAAAAGGAGCATGATGGTCATGGGAAATGTTACAACTCTTGTTTTTGAAGTATCATCTAACAAATAGGCAAAGACCAAGGAACTGAAACAATACTCAACAAATTTGTTTAATTTATTTTTTGCCTCGATCTTTGATTTTTTTAACAATTTAATTTTCATGAAATAGTATTTTGTTGCTGTTAATTGCTGTATCATTCTTGATAGTTCCTTTTCCTTCCAGGTTGGGTTGGAGTAGGGATGCTGGCAGAAGTACTCGTAGAACGAGGGGTCAAGCATTTCGAATCTCTAATGTACGCTTCAACTCAAGGCTTCTACATGTTTAATGGCAATATATTTGGTTTGAATATGGTCAAAGATTTTGTAGGTATGTCATACAGATTAATTTTGGGGGTGTGTGGGGGGATCCTTTATGGTAACATATATTTAGAGAAATTTTCCCCACACTCACTTGGATTTGAATATCGTTATAGTATATATGTAATTGTAGGAGCTTATTAGTCTTTTGTCCTTTGTTGTAATTTATTAGTCTTTATGTAGGGTTTTCATGTACGTCTCTTATGACCAATTATCATCTCCTACATGTTCGTTTGTTAAATTTCTTGACTTTGTCTTGATACCTAAGACCATTCATGAAGCTTAGTCTCATTATGGGTGGCGCAATGCGATGATTGAAGAAGTGAATGCCTTAGATGATAATGGTACTTAAGATTTAGTATCTCTTTCGGCAGGAAATAAGACTATTGGGTGCAAATAGGTGTTTGCAACTAAAGTTAATCCCAATGGATCAATAGCTCGTTTAAAAGCATGCATTGTTGCTTAAGGTTATGCTTAGATGTATGGGGTTGACTATTTTGATGGATTCTCTCCTGTTGCCAAGCTTATTTATGTTAGGTTATTCATTTCTATGGCAGCATCTCAAGATTGGCTTTTACATCAGCTTGTCATTAAAAATGTTTTTCTCCACGATGATCTTTAGGAGGAAGTCTATATGGAGCAATCACTTGGGTTTGTTGCTCAGGGGGAGAACAATAAAGTGTTTCGCCTTCGGAAATTCTTGTATGGGTTGAAGCAGAGTCCATATGCATGGTTTGAAAACTTTGGTAAAGCACTTGATCTGTTTGGAATGAAGAAAAGTAAATAGGATTACTTAGTTGTCTATCGAAGATCTATGAGTGGAATTGTTCTACTTGTTGTATATGTTGATGATATTGTTATAAGTGGCAATGACAACATGTATATTGTCTTTCAAATCTTTCATCTAAAGTCAATTTCACACTAAAGATTTGGGAGTGCTGAGGTACTTTTGGGGCATTGAAGTATTGAGAAGCAAGAAGGGTATTTTTATGTCAGAGAGAAAATATGTGCTTGATTTGCTATCTGAGACAGGAAAAGTGGGAGCCAAGCCATGTACTCCAATGATGCCTGGTCTACAAATGTTAAAACATGGAGAACTATTTGAGAAACCTAAGAGATATATGAGATTGGTTGGGAAGTGAAAATACCTTACAATAATATGTCCAAACATAGCTTATTCGGTAAGTATTTTGAGTCAATTTATGACTTCACCCACAGTGAAACATTGGGATGTAGTACAGCAAATTCTATGTTACCTTAATGCTGCATCTGGACGTAGGATCTTATATAAAGATCATTGTCATATGAACATTGAACATTTTTCAAATGCCGATTGGGTAGGATCAAAAGAAGACGGAAGAACGACTCTTGGGTATTGTGTTTTTGTTAGAGGCAATTTGGTTTCATGGAAGAGTAAGATGATCAAGTGCTGAGTCAGAATATAGAGTAATGGCACAATCAATGTGTGAAATAATGTGGTTACATCCAGTCTTGAATGAGTTGGGTTTTAATACTACAATTTTGACTAAGTTGTGGTGCGACAATCAAGCAGCTCTCCTAATTGCATCTAACCCAGTATTTCATGAGTGCACTAAACATATTGAAATTGATTGTCATTTTGTTTAGAGAAAAATACAACAAGGTTTGGTGTCTATTGGATATGTGAAGACTACAGAACAATTAGGGGATATCTATACAAAATTTTTGAATGGAGTTCGAATTGAATACCTTTGTAACAAGCTGGGCATGATTAATATATGTCCTCCAGCTTGAGGAGTGTTATACTATATATGTAACTATTGAACCCTATTAGTCTTTTGTAAGGTTTTGTAATTTACTAGCCTTTATTTAGGGATTCCATGTATGTCTTTTGTAAGCTATGTTTGGACATATATATTGAACTCTATTGTATCTATGGTATCAAATGAAGTAAGAAAGTTATTTCATATTTCGCTCTAACTACAACCAATGTAATCTATCTTTCAGCATCTCTTAGATTGCAACAAAATTGATGAGGTTGTCTGTCTGGTTCCTTAGATTTAAGTCTATTGCAGTTGAGATTATCGTTCTGTTTCTTCCTATGCTAGTTGTTCGATCTTATTAATTTTATTTACTTTGGAGAATCTGTGATTGAATGCTTAATCTACTTTTGTACCCTTTTTTATGAAGCTGCAATGCATTTCCTCGTTTACTTCATGTAATTTAATATACCTGAACAATACAGTATAGGAACCCCTTTATTATATTTAAAATGGTTTAATTCTTGTTCTCCAATTAAAGTCACTTTCTAAGTTGTTTGTGTGTTTTTATTCTACAACAAACATATCATGCCAATTGTTCAGGTCTCGCCTGGTAGGGATGGATTAATCAAGCAGGTGATTATGGTTGACCCTTTGGAAGCCAAACGTATGGCAGCGAAAGAAATGGAAAAGATCAAAGCAAAAGAGAAGTTCAAGGTAAAGGAAGTGATCATCATCAATGATGCAAAACTTGTTTACAAACAATATGGATATTTTCCCCAAGATCTTTTTGGAGAAGAGAATGACGGCAAATAATGTTGTGAAAATGTAAATGCAGAGAAGACGTCAAATAGAAGCAATTAATGGAGCATGGGCAATGATCGGTCTGACGGCTGGGCTTGTCATTGAAGGTCGAACCGGAAAAGGAATTCTAGCCCAGGTGAAAAGTTATAGCCTCTTGACATTTAATTTAACCCTGTGTCCCCCTTGTTGTTTCCCCTTCTTACCTTCAACAAGGTTATACTGGTTTAGAACATTTGTTGATTCCTTTATATGATTGGGAGTGTTAACTTAAAAAACTTGGAAAAATTATTAACTACCAAATTTTATAAGGTTAGGAGGTAGTCTCCATTTTTCATTTGAGTGAACATGGAGGTGGAAGCTTCATCACATGTTGAAGGGTTGGACAAAAGTAACCGGGTTTTAAAGCTTTTGACTCTAATAATTAGTAACCTCTTTTGTCTCTCAGTTTTAGGCTCCCTAAGCTATTTAGGATAAAATATTTTCGAGCTTCTCTTCTCTTTCTATCCTAGAGGTTGGTGTTCGATGTTTGAGGAGGTGCTCTTGAATCCTCCTTAAAGTTTCTTTGTTTGGTCTTCTTTATTTGATTTGTTGTTGAGCATGTGGCTTGAGAAGAACAGTAGCTTTTTTTCAATAGGTGGAGTGGTTTGGAAAGGATCTTTGGGATTTGATTAGGCTTAATTGCTATCGTGGGCGTTAATAACGCTTTTGTTTGTTTGTTTGTTTTGTTTTGTGTTGTAAATATAGCTTACCATTATTCTTATGGATTGAATTCCTTTCTATAATTGGGTGTGAGTGTTGTTTTGTTTTGGCTTATTTTTGTACATCTTTCTGTATCCTTTCATCTTTCTCACTGAGTGGTTTTTTTATTTAAAGAAAATGTAGATAATAGTCTTTTATTGGGTTTTGAACTTTTAGAAATTTAGGACTCATCGATTATGTTTCCTTCTTTCGAGTTTTCTTTTGGTAGCCTTCAGTTTTCTGTTTTTGGTTTCTGCCACCACCATTTTCTTTTCTTTCTAATCTACCCGAATTTTAAAAGGAGAGCAGTTATCAAAAGTATAGCTTTTGTTAATCTCTCTAAGCTTTCAAATAAGTTTCCATGAAATAGGAAACAATCTTAGTTTTGAAAGGAGCTATACAGAACATAGCTTTTGTTTTTAAGTATGTGTAAGTTTTCAAGTTTCCATAAAAACAGTAAACAAGCTTAGTTTTTATAAACAAAGAAACTAAAAATGAAAACATAACATTACAGTATATAGATATGTGATGCGATGTGATGACCAATGTGTGTTATTTTCCAGTTACTGTGTTCCATGAACCGTGAACAAGCTTTAGTGAAAATGTAACACTACGGTCTATATAGATCCGGAGATGTGATGACCAACATGTGTATAGCCCAATAATCCAATATTATGTTTTTTCTTCGCTTATTTTTCAGTTGGCTGACTACTTCAGCATCCTTATCAACTTCTTCATACGGTAAGAGGCATCTCCGAGGGGAAAAGGAGATCTTTGAATGAAAGAGGTATTCTCTTGTCGACCCTTGAAAATTTAGCATGTTAAGAACATTTTCAAGCAAGTCATTGCTTGTTTGCTGTAAAAAAAAATCTGGTGTTGAGGATATTCTCTTCTCCTTTGAAGTCTAATTTGATTTCTTCACATTTCATATACAAAGATTTTCATTTAATTGTGAAGGCGGTGAGATGAAGCAGCAGGTTCATGGTACTTTGTTTTGAAGATTCTATTTGCAATACAATTATATGTACTACCATTTGTTTTTTTAAAAATCAGTACAAGATTTCATTTCCAAGGAGAGGAAAAACCACCATAGTTCTGTACAATTATTTGGTGAAAAGAAGCTTGTCTCTTTTTTTTAAAAGAAAAAGAAATAGACTGTCGTTGTCTATAAGCTGATTCATCTTCCAATATTTGCAAACAACAGCGTTGTAATGTAAGCATAGATTAGAATTCAGATGAAAATTCAGATGAATTAGCTTTGATGATTCTTCTATTGAATTCCTGTTATTGTTGGTTACCTTCCAAAATGTCTTCCTTAGAGATCTCTTCTCATGGTAAGTACACTTGTGGAGTGTTTGTTGAAGAATGGAATTTGGGAGGGAAAAACTTTGAGTTTTTAATAG

mRNA sequence

CAAATTTAAATGAGTAAAGCGACTGAAAATTTAGGGGAAAGCACAATTTCGAGTCAACCAATTCAATTTCATTTCATTCTAATATGGTGGAGGCAAGCAATATTAGATATATCCGTTTGATTGGATTAGAACAAGCTCTGTACAGCCATCAGTGAGCGTCATTGCACAAATGTCATTCTCTATAAGATAATGTGTTGATGTGGGCATCTCAAATCTATAAATGGATAAGCATTCATGCAGGAAGGCGTTGCACTTTGGACATGGCTGCTGCTTCCACTGCGCTGATTCTCCCCATCAATGGAGGAAACCTTCCGCCTTCCCAATACCTCTCTTTTCGCCATACTCTCCCTTCTGCTACTTTCTCCAGGTTGGGTTGGAGTAGGGATGCTGGCAGAAGTACTCGTAGAACGAGGGGTCAAGCATTTCGAATCTCTAATGTCTCGCCTGGTAGGGATGGATTAATCAAGCAGGTGATTATGGTTGACCCTTTGGAAGCCAAACGTATGGCAGCGAAAGAAATGGAAAAGATCAAAGCAAAAGAGAAGTTCAAGAGAAGACGTCAAATAGAAGCAATTAATGGAGCATGGGCAATGATCGGTCTGACGGCTGGGCTTGTCATTGAAGGTCGAACCGGAAAAGGAATTCTAGCCCAGGTGAAAAGTTATAGCCTCTTGACATTTAATTTAACCCTGTGTCCCCCTTGTTGTTTCCCCTTCTTACCTTCAACAAGGTTATACTGGTTTAGAACATTTGTTGATTCCTTTATATGATTGGGAGTGTTAACTTAAAAAACTTGGAAAAATTATTAACTACCAAATTTTATAAGGTTAGGAGGTAGTCTCCATTTTTCATTTGAGTGAACATGGAGGTGGAAGCTTCATCACATGTTGAAGGGTTGGACAAAAGTAACCGGGTTTTAAAGCTTTTGACTCTAATAATTAGTAACCTCTTTTGTCTCTCAGTTTTAGGCTCCCTAAGCTATTTAGGATAAAATATTTTCGAGCTTCTCTTCTCTTTCTATCCTAGAGGTTGGTGTTCGATGTTTGAGGAGGTGCTCTTGAATCCTCCTTAAAGTTTCTTTGTTTGGTCTTCTTTATTTGATTTGTTGTTGAGCATGTGGCTTGAGAAGAACAGTAGCTTTTTTTCAATAGGTGGAGTGGTTTGGAAAGGATCTTTGGGATTTGATTAGGCTTAATTGCTATCGTGGGCGTTAATAACGCTTTTGTTTGTTTGTTTGTTTTGTTTTGTGTTGTAAATATAGCTTACCATTATTCTTATGGATTGAATTCCTTTCTATAATTGGGTGTGAGTGTTGTTTTGTTTTGGCTTATTTTTGTACATCTTTCTGTATCCTTTCATCTTTCTCACTGAGTGGTTTTTTTATTTAAAGAAAATGTAGATAATAGTCTTTTATTGGGTTTTGAACTTTTAGAAATTTAGGACTCATCGATTATGTTTCCTTCTTTCGAGTTTTCTTTTGGTAGCCTTCAGTTTTCTGTTTTTGGTTTCTGCCACCACCATTTTCTTTTCTTTCTAATCTACCCGAATTTTAAAAGGAGAGCAGTTATCAAAAGTATAGCTTTTGTTAATCTCTCTAAGCTTTCAAATAAGTTTCCATGAAATAGGAAACAATCTTAGTTTTGAAAGGAGCTATACAGAACATAGCTTTTGTTTTTAAGTATGTGTAAGTTTTCAAGTTTCCATAAAAACAGTAAACAAGCTTAGTTTTTATAAACAAAGAAACTAAAAATGAAAACATAACATTACAGTATATAGATATGTGATGCGATGTGATGACCAATGTGTGTTATTTTCCAGTTACTGTGTTCCATGAACCGTGAACAAGCTTTAGTGAAAATGTAACACTACGGTCTATATAGATCCGGAGATGTGATGACCAACATGTGTATAGCCCAATAATCCAATATTATGTTTTTTCTTCGCTTATTTTTCAGTTGGCTGACTACTTCAGCATCCTTATCAACTTCTTCATACGGTAAGAGGCATCTCCGAGGGGAAAAGGAGATCTTTGAATGAAAGAGGTATTCTCTTGTCGACCCTTGAAAATTTAGCATGTTAAGAACATTTTCAAGCAAGTCATTGCTTGTTTGCTGTAAAAAAAAATCTGGTGTTGAGGATATTCTCTTCTCCTTTGAAGTCTAATTTGATTTCTTCACATTTCATATACAAAGATTTTCATTTAATTGTGAAGGCGGTGAGATGAAGCAGCAGGTTCATGGTACTTTGTTTTGAAGATTCTATTTGCAATACAATTATATGTACTACCATTTGTTTTTTTAAAAATCAGTACAAGATTTCATTTCCAAGGAGAGGAAAAACCACCATAGTTCTGTACAATTATTTGGTGAAAAGAAGCTTGTCTCTTTTTTTTAAAAGAAAAAGAAATAGACTGTCGTTGTCTATAAGCTGATTCATCTTCCAATATTTGCAAACAACAGCGTTGTAATGTAAGCATAGATTAGAATTCAGATGAAAATTCAGATGAATTAGCTTTGATGATTCTTCTATTGAATTCCTGTTATTGTTGGTTACCTTCCAAAATGTCTTCCTTAGAGATCTCTTCTCATGGTAAGTACACTTGTGGAGTGTTTGTTGAAGAATGGAATTTGGGAGGGAAAAACTTTGAGTTTTTAATAG

Coding sequence (CDS)

ATGTGGGCATCTCAAATCTATAAATGGATAAGCATTCATGCAGGAAGGCGTTGCACTTTGGACATGGCTGCTGCTTCCACTGCGCTGATTCTCCCCATCAATGGAGGAAACCTTCCGCCTTCCCAATACCTCTCTTTTCGCCATACTCTCCCTTCTGCTACTTTCTCCAGGTTGGGTTGGAGTAGGGATGCTGGCAGAAGTACTCGTAGAACGAGGGGTCAAGCATTTCGAATCTCTAATGTCTCGCCTGGTAGGGATGGATTAATCAAGCAGGTGATTATGGTTGACCCTTTGGAAGCCAAACGTATGGCAGCGAAAGAAATGGAAAAGATCAAAGCAAAAGAGAAGTTCAAGAGAAGACGTCAAATAGAAGCAATTAATGGAGCATGGGCAATGATCGGTCTGACGGCTGGGCTTGTCATTGAAGGTCGAACCGGAAAAGGAATTCTAGCCCAGGTGAAAAGTTATAGCCTCTTGACATTTAATTTAACCCTGTGTCCCCCTTGTTGTTTCCCCTTCTTACCTTCAACAAGGTTATACTGGTTTAGAACATTTGTTGATTCCTTTATATGA

Protein sequence

MWASQIYKWISIHAGRRCTLDMAAASTALILPINGGNLPPSQYLSFRHTLPSATFSRLGWSRDAGRSTRRTRGQAFRISNVSPGRDGLIKQVIMVDPLEAKRMAAKEMEKIKAKEKFKRRRQIEAINGAWAMIGLTAGLVIEGRTGKGILAQVKSYSLLTFNLTLCPPCCFPFLPSTRLYWFRTFVDSFI*

Homology

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BLAST of CsGy2G006090 vs. NCBI nr
Match: XP_011648927.1 (uncharacterized protein LOC101212671 [Cucumis sativus] >KGN61133.1 hypothetical protein Csa_021338 [Cucumis sativus])

HSP 1 Score: 302 bits (773), Expect = 2.04e-102
Identity = 154/162 (95.06%), Postives = 156/162 (96.30%), Query Frame = 0


Query: 1   MWASQIYKWISIHAGRRCTLDMAAASTALILPINGGNLPPSQYLSFRHTLPSATFSRLGW 60
           MWASQIYKWISIHAGRRCTLDMAAASTALILPINGGNLPPSQYLSFRHTLPSATFSRLGW
Sbjct: 1   MWASQIYKWISIHAGRRCTLDMAAASTALILPINGGNLPPSQYLSFRHTLPSATFSRLGW 60

Query: 61  SRDAGRSTRRTRGQAFRISNVSPGRDGLIKQVIMVDPLEAKRMAAKEMEKIKAKEKFKRR 120
           SRDAGRSTRRTRGQAFRISNVSPGRDGLIKQVIMVDPLEAKRMAAKEMEKIKAKEKFKRR
Sbjct: 61  SRDAGRSTRRTRGQAFRISNVSPGRDGLIKQVIMVDPLEAKRMAAKEMEKIKAKEKFKRR 120

Query: 121 RQIEAINGAWAMIGLTAGLVIEGRTGKGILAQVKSYSLLTFN 162
           RQIEAINGAWAMIGLTAGLVIEGRTGKGILAQ+  Y  +  N
Sbjct: 121 RQIEAINGAWAMIGLTAGLVIEGRTGKGILAQLADYFSILIN 162

[Close]

BLAST of CsGy2G006090 vs. NCBI nr
Match: XP_008451793.1 (PREDICTED: uncharacterized protein LOC103492970 isoform X1 [Cucumis melo] >XP_008451800.1 PREDICTED: uncharacterized protein LOC103492970 isoform X1 [Cucumis melo] >XP_008451808.1 PREDICTED: uncharacterized protein LOC103492970 isoform X1 [Cucumis melo])

HSP 1 Score: 272 bits (695), Expect = 1.67e-90
Identity = 140/164 (85.37%), Postives = 149/164 (90.85%), Query Frame = 0


Query: 1   MWASQIYKWISIHAGRRCTLDMAAASTALILPINGGNLPPSQYLSFRHTLPSATFSRLGW 60
           MWAS+IYKWISIHA + CTL+MAAAS +LILPINGGNLPPSQYLSFRH+ PSATFSRLGW
Sbjct: 1   MWASEIYKWISIHARKSCTLEMAAASASLILPINGGNLPPSQYLSFRHSHPSATFSRLGW 60

Query: 61  SRD--AGRSTRRTRGQAFRISNVSPGRDGLIKQVIMVDPLEAKRMAAKEMEKIKAKEKFK 120
           SRD   GRST RTRGQAFRISNVSP +DGLIKQVIMVDPLEAKRMAAKEMEKIKAKEKFK
Sbjct: 61  SRDQDVGRSTHRTRGQAFRISNVSPAKDGLIKQVIMVDPLEAKRMAAKEMEKIKAKEKFK 120

Query: 121 RRRQIEAINGAWAMIGLTAGLVIEGRTGKGILAQVKSYSLLTFN 162
           RRRQIEAINGAWAMIGLTAGLVIEG+TGKGILAQ+  Y  +  N
Sbjct: 121 RRRQIEAINGAWAMIGLTAGLVIEGQTGKGILAQLADYFSILIN 164

[Close]

BLAST of CsGy2G006090 vs. NCBI nr
Match: KAA0055599.1 (uncharacterized protein E6C27_scaffold222G00820 [Cucumis melo var. makuwa] >TYK01325.1 uncharacterized protein E5676_scaffold29G00030 [Cucumis melo var. makuwa])

HSP 1 Score: 254 bits (648), Expect = 1.71e-83
Identity = 138/160 (86.25%), Postives = 144/160 (90.00%), Query Frame = 0


Query: 22  MAAASTALILPINGGNLPPSQYLSFRHTLPSATFSRLGWSRD--AGRSTRRTRGQAFRIS 81
           MAAAS +LILPINGGNLPPSQYLSFRH+ PSATFSRLGWSRD   GRST RTRGQAFRIS
Sbjct: 1   MAAASASLILPINGGNLPPSQYLSFRHSHPSATFSRLGWSRDQDVGRSTHRTRGQAFRIS 60

Query: 82  NVSPGRDGLIKQVIMVDPLEAKRMAAKEMEKIKAKEKFKRRRQIEAINGAWAMIGLTAGL 141
           NVSP +DGLIKQVIMVDPLEAKRMAAKEMEKIKAKEKFKRRRQIEAINGAWAMIGLTAGL
Sbjct: 61  NVSPAKDGLIKQVIMVDPLEAKRMAAKEMEKIKAKEKFKRRRQIEAINGAWAMIGLTAGL 120

Query: 142 VIEGRTGKGILAQVKSYSLLTFNLTLCPPCCFPFLPSTRL 179
           VIEG+TGKGILAQVKSYSLLTF LTL     FPFL   ++
Sbjct: 121 VIEGQTGKGILAQVKSYSLLTFLLTL-----FPFLTFNKV 155

[Close]

BLAST of CsGy2G006090 vs. NCBI nr
Match: XP_016902490.1 (PREDICTED: uncharacterized protein LOC103492970 isoform X2 [Cucumis melo])

HSP 1 Score: 246 bits (627), Expect = 2.60e-80
Identity = 131/164 (79.88%), Postives = 139/164 (84.76%), Query Frame = 0


Query: 1   MWASQIYKWISIHAGRRCTLDMAAASTALILPINGGNLPPSQYLSFRHTLPSATFSRLGW 60
           MWAS+IYKWISIHA + CTL+MAAAS +LILPINGGNLPPSQYLSFRH+ PSATFSRLGW
Sbjct: 1   MWASEIYKWISIHARKSCTLEMAAASASLILPINGGNLPPSQYLSFRHSHPSATFSRLGW 60

Query: 61  SRD--AGRSTRRTRGQAFRISNVSPGRDGLIKQVIMVDPLEAKRMAAKEMEKIKAKEKFK 120
           SRD   GRST RTRGQAFRISNV           IMVDPLEAKRMAAKEMEKIKAKEKFK
Sbjct: 61  SRDQDVGRSTHRTRGQAFRISNV-----------IMVDPLEAKRMAAKEMEKIKAKEKFK 120

Query: 121 RRRQIEAINGAWAMIGLTAGLVIEGRTGKGILAQVKSYSLLTFN 162
           RRRQIEAINGAWAMIGLTAGLVIEG+TGKGILAQ+  Y  +  N
Sbjct: 121 RRRQIEAINGAWAMIGLTAGLVIEGQTGKGILAQLADYFSILIN 153

[Close]

BLAST of CsGy2G006090 vs. NCBI nr
Match: XP_038889814.1 (uncharacterized protein LOC120079625 [Benincasa hispida])

HSP 1 Score: 223 bits (567), Expect = 2.37e-71
Identity = 118/140 (84.29%), Postives = 125/140 (89.29%), Query Frame = 0


Query: 25  ASTALILPINGGNLPPSQYLSFRHTLPSATFSRLGWSRD--AGRSTRRTRGQAFRISNVS 84
           AST+LILPI GGNLPPSQYLSFRHT PSATFSR GWSRD   GRST RTRGQAF+ISNVS
Sbjct: 2   ASTSLILPIKGGNLPPSQYLSFRHTHPSATFSRSGWSRDQDVGRSTHRTRGQAFQISNVS 61

Query: 85  PGRDGLIKQVIMVDPLEAKRMAAKEMEKIKAKEKFKRRRQIEAINGAWAMIGLTAGLVIE 144
           PG+D LIKQVIMVDPLEAKR+AAKEMEKIKAKEKFKR+RQIEAINGAWAMIGLTAGLVIE
Sbjct: 62  PGKDDLIKQVIMVDPLEAKRIAAKEMEKIKAKEKFKRKRQIEAINGAWAMIGLTAGLVIE 121

Query: 145 GRTGKGILAQVKSYSLLTFN 162
           G+TGKGILAQ+  Y     N
Sbjct: 122 GQTGKGILAQLGGYFSTVIN 141

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BLAST of CsGy2G006090 vs. ExPASy TrEMBL
Match: A0A0A0LH95 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G058660 PE=4 SV=1)

HSP 1 Score: 302 bits (773), Expect = 9.86e-103
Identity = 154/162 (95.06%), Postives = 156/162 (96.30%), Query Frame = 0


Query: 1   MWASQIYKWISIHAGRRCTLDMAAASTALILPINGGNLPPSQYLSFRHTLPSATFSRLGW 60
           MWASQIYKWISIHAGRRCTLDMAAASTALILPINGGNLPPSQYLSFRHTLPSATFSRLGW
Sbjct: 1   MWASQIYKWISIHAGRRCTLDMAAASTALILPINGGNLPPSQYLSFRHTLPSATFSRLGW 60

Query: 61  SRDAGRSTRRTRGQAFRISNVSPGRDGLIKQVIMVDPLEAKRMAAKEMEKIKAKEKFKRR 120
           SRDAGRSTRRTRGQAFRISNVSPGRDGLIKQVIMVDPLEAKRMAAKEMEKIKAKEKFKRR
Sbjct: 61  SRDAGRSTRRTRGQAFRISNVSPGRDGLIKQVIMVDPLEAKRMAAKEMEKIKAKEKFKRR 120

Query: 121 RQIEAINGAWAMIGLTAGLVIEGRTGKGILAQVKSYSLLTFN 162
           RQIEAINGAWAMIGLTAGLVIEGRTGKGILAQ+  Y  +  N
Sbjct: 121 RQIEAINGAWAMIGLTAGLVIEGRTGKGILAQLADYFSILIN 162

[Close]

BLAST of CsGy2G006090 vs. ExPASy TrEMBL
Match: A0A1S3BSE0 (uncharacterized protein LOC103492970 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103492970 PE=4 SV=1)

HSP 1 Score: 272 bits (695), Expect = 8.08e-91
Identity = 140/164 (85.37%), Postives = 149/164 (90.85%), Query Frame = 0


Query: 1   MWASQIYKWISIHAGRRCTLDMAAASTALILPINGGNLPPSQYLSFRHTLPSATFSRLGW 60
           MWAS+IYKWISIHA + CTL+MAAAS +LILPINGGNLPPSQYLSFRH+ PSATFSRLGW
Sbjct: 1   MWASEIYKWISIHARKSCTLEMAAASASLILPINGGNLPPSQYLSFRHSHPSATFSRLGW 60

Query: 61  SRD--AGRSTRRTRGQAFRISNVSPGRDGLIKQVIMVDPLEAKRMAAKEMEKIKAKEKFK 120
           SRD   GRST RTRGQAFRISNVSP +DGLIKQVIMVDPLEAKRMAAKEMEKIKAKEKFK
Sbjct: 61  SRDQDVGRSTHRTRGQAFRISNVSPAKDGLIKQVIMVDPLEAKRMAAKEMEKIKAKEKFK 120

Query: 121 RRRQIEAINGAWAMIGLTAGLVIEGRTGKGILAQVKSYSLLTFN 162
           RRRQIEAINGAWAMIGLTAGLVIEG+TGKGILAQ+  Y  +  N
Sbjct: 121 RRRQIEAINGAWAMIGLTAGLVIEGQTGKGILAQLADYFSILIN 164

[Close]

BLAST of CsGy2G006090 vs. ExPASy TrEMBL
Match: A0A5A7UQ54 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold29G00030 PE=4 SV=1)

HSP 1 Score: 254 bits (648), Expect = 8.27e-84
Identity = 138/160 (86.25%), Postives = 144/160 (90.00%), Query Frame = 0


Query: 22  MAAASTALILPINGGNLPPSQYLSFRHTLPSATFSRLGWSRD--AGRSTRRTRGQAFRIS 81
           MAAAS +LILPINGGNLPPSQYLSFRH+ PSATFSRLGWSRD   GRST RTRGQAFRIS
Sbjct: 1   MAAASASLILPINGGNLPPSQYLSFRHSHPSATFSRLGWSRDQDVGRSTHRTRGQAFRIS 60

Query: 82  NVSPGRDGLIKQVIMVDPLEAKRMAAKEMEKIKAKEKFKRRRQIEAINGAWAMIGLTAGL 141
           NVSP +DGLIKQVIMVDPLEAKRMAAKEMEKIKAKEKFKRRRQIEAINGAWAMIGLTAGL
Sbjct: 61  NVSPAKDGLIKQVIMVDPLEAKRMAAKEMEKIKAKEKFKRRRQIEAINGAWAMIGLTAGL 120

Query: 142 VIEGRTGKGILAQVKSYSLLTFNLTLCPPCCFPFLPSTRL 179
           VIEG+TGKGILAQVKSYSLLTF LTL     FPFL   ++
Sbjct: 121 VIEGQTGKGILAQVKSYSLLTFLLTL-----FPFLTFNKV 155

[Close]

BLAST of CsGy2G006090 vs. ExPASy TrEMBL
Match: A0A1S4E3D1 (uncharacterized protein LOC103492970 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103492970 PE=4 SV=1)

HSP 1 Score: 246 bits (627), Expect = 1.26e-80
Identity = 131/164 (79.88%), Postives = 139/164 (84.76%), Query Frame = 0


Query: 1   MWASQIYKWISIHAGRRCTLDMAAASTALILPINGGNLPPSQYLSFRHTLPSATFSRLGW 60
           MWAS+IYKWISIHA + CTL+MAAAS +LILPINGGNLPPSQYLSFRH+ PSATFSRLGW
Sbjct: 1   MWASEIYKWISIHARKSCTLEMAAASASLILPINGGNLPPSQYLSFRHSHPSATFSRLGW 60

Query: 61  SRD--AGRSTRRTRGQAFRISNVSPGRDGLIKQVIMVDPLEAKRMAAKEMEKIKAKEKFK 120
           SRD   GRST RTRGQAFRISNV           IMVDPLEAKRMAAKEMEKIKAKEKFK
Sbjct: 61  SRDQDVGRSTHRTRGQAFRISNV-----------IMVDPLEAKRMAAKEMEKIKAKEKFK 120

Query: 121 RRRQIEAINGAWAMIGLTAGLVIEGRTGKGILAQVKSYSLLTFN 162
           RRRQIEAINGAWAMIGLTAGLVIEG+TGKGILAQ+  Y  +  N
Sbjct: 121 RRRQIEAINGAWAMIGLTAGLVIEGQTGKGILAQLADYFSILIN 153

[Close]

BLAST of CsGy2G006090 vs. ExPASy TrEMBL
Match: A0A6J1I0N1 (uncharacterized protein LOC111468645 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111468645 PE=4 SV=1)

HSP 1 Score: 201 bits (511), Expect = 4.16e-63
Identity = 111/143 (77.62%), Postives = 119/143 (83.22%), Query Frame = 0


Query: 25  ASTALILPINGGNLPPSQYLSFRHTLPSATFSRLGWSRD--AGRSTRRTRGQAFRI---S 84
           ASTALILPI+GGN   SQ LSFRHT  SATFSR GWSRD   G ST RTRGQAFRI    
Sbjct: 2   ASTALILPIHGGNRTSSQCLSFRHTHSSATFSRWGWSRDRDVGNSTHRTRGQAFRILANP 61

Query: 85  NVSPGRDGLIKQVIMVDPLEAKRMAAKEMEKIKAKEKFKRRRQIEAINGAWAMIGLTAGL 144
           NVSPG+D LIK+VIMVDPLEAKR+AAKEMEKIKAKEKFKRRRQIEAINGAWAMIGLTAGL
Sbjct: 62  NVSPGKDDLIKKVIMVDPLEAKRLAAKEMEKIKAKEKFKRRRQIEAINGAWAMIGLTAGL 121

Query: 145 VIEGRTGKGILAQVKSYSLLTFN 162
           ++EG+TGKGILAQ+  Y     N
Sbjct: 122 IVEGQTGKGILAQLAGYLAAVVN 144

[Close]

BLAST of CsGy2G006090 vs. TAIR 10
Match: AT4G28025.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast thylakoid membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 102.1 bits (253), Expect = 5.2e-22
Identity = 63/118 (53.39%), Postives = 82/118 (69.49%), Query Frame = 0


Query: 47  RHTLPSATFSR-LGWSRDAGRSTRRTRGQAFRI---SNVS----PGRDGLIKQVIMVDPL 106
           R  +PS++  + L   +DA     R R    R+    NVS    PG+  + K+VIMVDPL
Sbjct: 28  RFAIPSSSLVKGLRRHQDAKLVGNRARVGVVRVLANPNVSPPPPPGKAKVKKEVIMVDPL 87

Query: 107 EAKRMAAKEMEKIKAKEKFKRRRQIEAINGAWAMIGLTAGLVIEGRTGKGILAQVKSY 157
           EAKR+A+K+ME+IK +EK +RRR+IEAINGAWA+IGL  GLVIE +TGKGILAQ+  Y
Sbjct: 88  EAKRLASKQMEEIKGREKQQRRREIEAINGAWAIIGLMIGLVIEAQTGKGILAQLAGY 145

[Close]

BLAST of CsGy2G006090 vs. TAIR 10
Match: AT4G28025.2 (unknown protein. )

HSP 1 Score: 101.7 bits (252), Expect = 6.8e-22
Identity = 66/127 (51.97%), Postives = 83/127 (65.35%), Query Frame = 0


Query: 39  PPSQYLSFRHTLPSATFSRLGWSR--DAGRSTRRTRGQAFRI---SNVS----PGRDGLI 98
           PP  +L       S++  R G  R  DA     R R    R+    NVS    PG+  + 
Sbjct: 10  PPIFFLPGADAQFSSSNGRKGLRRHQDAKLVGNRARVGVVRVLANPNVSPPPPPGKAKVK 69

Query: 99  KQVIMVDPLEAKRMAAKEMEKIKAKEKFKRRRQIEAINGAWAMIGLTAGLVIEGRTGKGI 157
           K+VIMVDPLEAKR+A+K+ME+IK +EK +RRR+IEAINGAWA+IGL  GLVIE +TGKGI
Sbjct: 70  KEVIMVDPLEAKRLASKQMEEIKGREKQQRRREIEAINGAWAIIGLMIGLVIEAQTGKGI 129

The following BLAST results are available for this feature:

BLAST of CsGy2G006090 vs.


Match Name	E-value	Identity	Description

BLAST of CsGy2G006090 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_011648927.1	2.04e-102	95.06	uncharacterized protein LOC101212671 [Cucumis sativus] >KGN61133.1 hypothetical ...	[more]
XP_008451793.1	1.67e-90	85.37	PREDICTED: uncharacterized protein LOC103492970 isoform X1 [Cucumis melo] >XP_00...	[more]
KAA0055599.1	1.71e-83	86.25	uncharacterized protein E6C27_scaffold222G00820 [Cucumis melo var. makuwa] >TYK0...	[more]
XP_016902490.1	2.60e-80	79.88	PREDICTED: uncharacterized protein LOC103492970 isoform X2 [Cucumis melo]	[more]
XP_038889814.1	2.37e-71	84.29	uncharacterized protein LOC120079625 [Benincasa hispida]	[more]

BLAST of CsGy2G006090 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LH95	9.86e-103	95.06	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G058660 PE=4 SV=1	[more]
A0A1S3BSE0	8.08e-91	85.37	uncharacterized protein LOC103492970 isoform X1 OS=Cucumis melo OX=3656 GN=LOC10...	[more]
A0A5A7UQ54	8.27e-84	86.25	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A1S4E3D1	1.26e-80	79.88	uncharacterized protein LOC103492970 isoform X2 OS=Cucumis melo OX=3656 GN=LOC10...	[more]
A0A6J1I0N1	4.16e-63	77.62	uncharacterized protein LOC111468645 isoform X1 OS=Cucurbita maxima OX=3661 GN=L...	[more]

BLAST of CsGy2G006090 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G28025.1	5.2e-22	53.39	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT4G28025.2	6.8e-22	51.97	unknown protein.	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (Gy14) v2.1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR37752	OS02G0610700 PROTEIN	coord: 32..158
None	No IPR available	PANTHER	PTHR37752:SF1	OS02G0610700 PROTEIN	coord: 32..158
None	No IPR available	SUPERFAMILY	103511	Chlorophyll a-b binding protein	coord: 112..154

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsGy2G006090.2	CsGy2G006090.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0009507	chloroplast
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0009579	thylakoid
molecular_function	GO:0046872	metal ion binding