CsGy2G005640 (gene) Cucumber (Gy14) v2.1

Overview


Name	CsGy2G005640
Type	gene
Organism	Cucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
Description	TF-B3 domain-containing protein
Location	Gy14Chr2: 3934009 .. 3934671 (+)
RNA-Seq Expression	CsGy2G005640
Synteny	CsGy2G005640

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGTTAAGGTACGATACACTTACAATAACAAAATAGTTGAAAAGCACGTATATGAAGCATCTTTGGCTCTTTGTCACATGAAAAATAGTAGATGTTTGAAACCATTTGAGAAACCGGTAACTCGTTTAAACAATCGATTTTCAAGTTCAACTTCCATTTCTATACTCAACAAACAACCTCCGATACTCATTGAACGTGCTCCGGTAGTCAATGAAGCTTTACCCAACAACAACAACAATGAAAATGTGGCTGGTAGAGATTGGGGTAGAGTTCCGCCAATGGCAGTGATTCAGAACATAATTGGAGAGTGCAGTCCACCTTTTGTGAAGCAATTGATGAAAACAGATGTGACAGAAAGTCAAGGGAGATTAGCACTTCATAAAGAGTTTGTGACTCGTAATTTGATTCCAATGTTCAATAGAGGTGAGAATTTGAAGAATGGAATTAGTGTTACGGTTTATGATAGTGAAGGAAGAGAATACGACATGATATTCAAGTTTTGGACTTCTAAACTTTATGTGCTAACGAAAAGTTGGAATAAGTTTTACAAGAGCAATAATTTGACGCGTCCCGGTGAGTTTATTAGTGTTTGGATGTTTCGACACGTCGTCAATCGTAAACTTTGCTTTGCTATTATGAGAGGAGATGCTGAACAACCGTGA

mRNA sequence

ATGGTTAAGGTACGATACACTTACAATAACAAAATAGTTGAAAAGCACGTATATGAAGCATCTTTGGCTCTTTGTCACATGAAAAATAGTAGATGTTTGAAACCATTTGAGAAACCGGTAACTCGTTTAAACAATCGATTTTCAAGTTCAACTTCCATTTCTATACTCAACAAACAACCTCCGATACTCATTGAACGTGCTCCGGTAGTCAATGAAGCTTTACCCAACAACAACAACAATGAAAATGTGGCTGGTAGAGATTGGGGTAGAGTTCCGCCAATGGCAGTGATTCAGAACATAATTGGAGAGTGCAGTCCACCTTTTGTGAAGCAATTGATGAAAACAGATGTGACAGAAAGTCAAGGGAGATTAGCACTTCATAAAGAGTTTGTGACTCGTAATTTGATTCCAATGTTCAATAGAGGTGAGAATTTGAAGAATGGAATTAGTGTTACGGTTTATGATAGTGAAGGAAGAGAATACGACATGATATTCAAGTTTTGGACTTCTAAACTTTATGTGCTAACGAAAAGTTGGAATAAGTTTTACAAGAGCAATAATTTGACGCGTCCCGGTGAGTTTATTAGTGTTTGGATGTTTCGACACGTCGTCAATCGTAAACTTTGCTTTGCTATTATGAGAGGAGATGCTGAACAACCGTGA

Coding sequence (CDS)

ATGGTTAAGGTACGATACACTTACAATAACAAAATAGTTGAAAAGCACGTATATGAAGCATCTTTGGCTCTTTGTCACATGAAAAATAGTAGATGTTTGAAACCATTTGAGAAACCGGTAACTCGTTTAAACAATCGATTTTCAAGTTCAACTTCCATTTCTATACTCAACAAACAACCTCCGATACTCATTGAACGTGCTCCGGTAGTCAATGAAGCTTTACCCAACAACAACAACAATGAAAATGTGGCTGGTAGAGATTGGGGTAGAGTTCCGCCAATGGCAGTGATTCAGAACATAATTGGAGAGTGCAGTCCACCTTTTGTGAAGCAATTGATGAAAACAGATGTGACAGAAAGTCAAGGGAGATTAGCACTTCATAAAGAGTTTGTGACTCGTAATTTGATTCCAATGTTCAATAGAGGTGAGAATTTGAAGAATGGAATTAGTGTTACGGTTTATGATAGTGAAGGAAGAGAATACGACATGATATTCAAGTTTTGGACTTCTAAACTTTATGTGCTAACGAAAAGTTGGAATAAGTTTTACAAGAGCAATAATTTGACGCGTCCCGGTGAGTTTATTAGTGTTTGGATGTTTCGACACGTCGTCAATCGTAAACTTTGCTTTGCTATTATGAGAGGAGATGCTGAACAACCGTGA

Protein sequence

MVKVRYTYNNKIVEKHVYEASLALCHMKNSRCLKPFEKPVTRLNNRFSSSTSISILNKQPPILIERAPVVNEALPNNNNNENVAGRDWGRVPPMAVIQNIIGECSPPFVKQLMKTDVTESQGRLALHKEFVTRNLIPMFNRGENLKNGISVTVYDSEGREYDMIFKFWTSKLYVLTKSWNKFYKSNNLTRPGEFISVWMFRHVVNRKLCFAIMRGDAEQP*

Homology

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BLAST of CsGy2G005640 vs. ExPASy Swiss-Prot
Match: Q9ZR14 (Putative B3 domain-containing protein At4g03170 OS=Arabidopsis thaliana OX=3702 GN=At4g03170 PE=3 SV=1)

HSP 1 Score: 95.5 bits (236), Expect = 8.0e-19
Identity = 48/109 (44.04%), Postives = 62/109 (56.88%), Query Frame = 0


Query: 105 SPPFVKQLMKTDVTESQGRLALHKEFVTRNLIPMFNRGENLKNGISVTVYDSEGREYDMI 164
           S P  KQLM +DV + Q  L L KE V   ++P     EN   GI V+VY  +G+   M 
Sbjct: 133 SRPIKKQLMSSDVDKDQCMLMLSKEQVKEKMLPFLEDSENPVKGIDVSVYGPDGKVQQME 192

Query: 165 FKFWT-SKLYVLTKSWNKFYKSNNLTRPGEFISVWMFRHVVNRKLCFAI 213
           FK W   K  VLT  W +F +   L+   +F++VWMFRH+  RKLCFAI
Sbjct: 193 FKMWNGDKTPVLTSGWKQFVEDYGLSMTCDFVTVWMFRHIKTRKLCFAI 241

[Close]

BLAST of CsGy2G005640 vs. ExPASy Swiss-Prot
Match: Q9ZR15 (Putative B3 domain-containing protein At4g03160 OS=Arabidopsis thaliana OX=3702 GN=At4g03160 PE=3 SV=1)

HSP 1 Score: 81.6 bits (200), Expect = 1.2e-14
Identity = 41/104 (39.42%), Postives = 61/104 (58.65%), Query Frame = 0


Query: 110 KQLMKTDVTESQGRLALHKEFVTRNLIPMFNRGENL-KNGISVTVYDSEGREYDMIFKFW 169
           +QLM +DV ++Q RL L KE V + ++    + E L   G++V+VY   G  + M+ K W
Sbjct: 67  EQLMDSDVKDNQYRLMLGKEPV-KKMMDALGKTEKLGTKGLNVSVYGPNGENHKMVLKIW 126

Query: 170 TSKLYVLTKSWNKFYKSNNLTRPGEFISVWMFRHVVNRKLCFAI 213
                VLT  W  F KS  L +  +F+++WMFRH   R++CFAI
Sbjct: 127 IKGTPVLTSGWKNFVKSYKLEKHVDFLTIWMFRHKKTREICFAI 169

[Close]

BLAST of CsGy2G005640 vs. ExPASy Swiss-Prot
Match: Q9LM90 (B3 domain-containing protein At1g20600 OS=Arabidopsis thaliana OX=3702 GN=At1g20600 PE=2 SV=1)

HSP 1 Score: 65.5 bits (158), Expect = 8.8e-10
Identity = 34/93 (36.56%), Postives = 46/93 (49.46%), Query Frame = 0


Query: 105 SPPFVKQLMKTDVTESQGRLALHKEFVTRNLIPMFNRGENLKNGISVTVYDSEGREYDMI 164
           S P  KQLM +DV   Q RL L KE V   ++P     E+   G+ V+VY  +G    M 
Sbjct: 122 SRPIKKQLMSSDVDTDQSRLMLSKEQVKEKMLPFLEESEDPVKGVDVSVYGPDGEVQQMK 181

Query: 165 FKFWT-SKLYVLTKSWNKFYKSNNLTRPGEFIS 197
           FK W   K  VLT  W +F     L +  +F++
Sbjct: 182 FKMWNGDKTPVLTSGWMQFVADYGLLKTSDFVT 214

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BLAST of CsGy2G005640 vs. NCBI nr
Match: XP_031736688.1 (uncharacterized protein LOC116402065 [Cucumis sativus])

HSP 1 Score: 437 bits (1124), Expect = 1.60e-154
Identity = 217/223 (97.31%), Postives = 218/223 (97.76%), Query Frame = 0


Query: 1   MVKVRYTYNNKIVEKHVYEASLALCHMKNSRCLKPFEKPVTRLNNRFSSSTSISILNKQP 60
           MVKVRYTYNNKIVEKHVYEASLALCHMKNSRCLKPFEKPVTRLNNRFSSSTSISILNKQP
Sbjct: 1   MVKVRYTYNNKIVEKHVYEASLALCHMKNSRCLKPFEKPVTRLNNRFSSSTSISILNKQP 60

Query: 61  PILIERAPVVNEALPNNNNNENVA----GRDWGRVPPMAVIQNIIGECSPPFVKQLMKTD 120
           PILIERAP+VNEALPNNNN ENVA    GRDWGRVPPMAVIQNIIGECSPPFVKQLMKTD
Sbjct: 61  PILIERAPIVNEALPNNNN-ENVAVAVAGRDWGRVPPMAVIQNIIGECSPPFVKQLMKTD 120

Query: 121 VTESQGRLALHKEFVTRNLIPMFNRGENLKNGISVTVYDSEGREYDMIFKFWTSKLYVLT 180
           VTESQGRLALHKEFVTRNLIPMFNRGENLKNGISVTVYDSEGREYDMIFKFWTSKLYVLT
Sbjct: 121 VTESQGRLALHKEFVTRNLIPMFNRGENLKNGISVTVYDSEGREYDMIFKFWTSKLYVLT 180

Query: 181 KSWNKFYKSNNLTRPGEFISVWMFRHVVNRKLCFAIMRGDAEQ 219
           KSWNKFYKSNNLTRPGEFISVWMFRHVVNRKLCFAIMRGDAEQ
Sbjct: 181 KSWNKFYKSNNLTRPGEFISVWMFRHVVNRKLCFAIMRGDAEQ 222

[Close]

BLAST of CsGy2G005640 vs. NCBI nr
Match: KAA0043114.1 (putative B3 domain-containing protein [Cucumis melo var. makuwa] >TYJ96217.1 putative B3 domain-containing protein [Cucumis melo var. makuwa])

HSP 1 Score: 319 bits (817), Expect = 1.06e-107
Identity = 167/231 (72.29%), Postives = 182/231 (78.79%), Query Frame = 0


Query: 1   MVKVRYTYNNKIVEKHVYEASLALCHMKNSRCLKPFEKPVTRLNNRFSSSTSIS------ 60
           MVKV Y YNNKIV+K VYEA LALC MK S   +PFE+P     N+F SSTSIS      
Sbjct: 1   MVKVGYIYNNKIVKKEVYEACLALCEMKKSS--EPFEEP-----NQFPSSTSISMVDDQP 60

Query: 61  -ILNKQPPILIERAPVVNEALPNNNNNEN------VAGRDWGRVPPMAVIQNIIGECSPP 120
            ++N+QPPI+ E APVVNEAL NNNNN N      VA RD GR+PPMAVIQNIIGECSPP
Sbjct: 61  PVVNEQPPIVNEHAPVVNEALLNNNNNNNENVAAVVADRDLGRLPPMAVIQNIIGECSPP 120

Query: 121 FVKQLMKTDVTESQGRLALHKEFVTRNLIPMFNRGENLKNGISVTVYDSEGREYDMIFKF 180
           FVKQL KTDVT+SQGRLALHKEFV RNL+PMFN  E L NGISVTVYDSEGREYDM F+ 
Sbjct: 121 FVKQLTKTDVTDSQGRLALHKEFVNRNLVPMFNGDEILTNGISVTVYDSEGREYDMTFRL 180

Query: 181 WTSKLYVLTKSWNKFYKSNNLTRPGEFISVWMFRHVVNRKLCFAIMRGDAE 218
           WTSKLYVLTKSW KFY  N LTRP EFI++WMFRHVVN KLCFAIMRG+ E
Sbjct: 181 WTSKLYVLTKSWKKFYHDNGLTRPDEFITLWMFRHVVNHKLCFAIMRGNVE 224

[Close]

BLAST of CsGy2G005640 vs. NCBI nr
Match: KGN56101.1 (hypothetical protein Csa_010492 [Cucumis sativus])

HSP 1 Score: 311 bits (796), Expect = 1.61e-104
Identity = 159/226 (70.35%), Postives = 183/226 (80.97%), Query Frame = 0


Query: 1   MVKVRYTYNNKIVEKHVYEASLALCHMKNSRCLKPFEKPVTRLNNRFSSSTSISILNKQP 60
           MV V YTYNNKIV + VY+ASL L  M  S+ ++PFE+P+ R NN+ SS TS S++N+Q 
Sbjct: 1   MVDVHYTYNNKIVAEDVYKASLILYDMALSKSVEPFEEPIDRFNNQLSS-TSTSLVNEQS 60

Query: 61  PILIERAPVVNEALPNNN----NNENVA-----GRDWGRVPPMAVIQNIIGECSPPFVKQ 120
           P++ E APVVNE LPNN+    NNENVA     GRD GR PPMAVIQNIIGECSPPFVKQ
Sbjct: 61  PVVNEHAPVVNEVLPNNDDDNGNNENVAAAVVVGRDQGRFPPMAVIQNIIGECSPPFVKQ 120

Query: 121 LMKTDVTESQGRLALHKEFVTRNLIPMFNRGENLKNGISVTVYDSEGREYDMIFKFWTSK 180
           L KTDVT++QGRLALHKEFV  NL PMFN  E+L++GISV VYD EGREYDMIFK W SK
Sbjct: 121 LTKTDVTDNQGRLALHKEFVNLNLDPMFNDDEDLEDGISVIVYDIEGREYDMIFKLWASK 180

Query: 181 LYVLTKSWNKFYKSNNLTRPGEFISVWMFRHVVNRKLCFAIMRGDA 217
           LYVLTKSW +FYK+N+LT+PGEFISVWMFRHVV +KLCFAIMRG A
Sbjct: 181 LYVLTKSWKEFYKTNDLTQPGEFISVWMFRHVVTQKLCFAIMRGQA 225

[Close]

BLAST of CsGy2G005640 vs. NCBI nr
Match: KAG6589940.1 (putative B3 domain-containing protein, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 187 bits (475), Expect = 5.73e-56
Identity = 107/231 (46.32%), Postives = 142/231 (61.47%), Query Frame = 0


Query: 1   MVKVRYTYNNKIVEKHVYEASLALCHMKNSRCL---KPFEKPVTRLNNRFSSSTSISILN 60
           MV+V Y +NN+I+EK VYE +          CL   + F +P    + + S STS  + +
Sbjct: 1   MVRVHYRHNNRIIEKDVYETARIF------HCLCTGEQFPEPSYSSDEQVSGSTSGDMDD 60

Query: 61  KQPPILIERAPVVNEALPNNNNNENVA--GRDWGRV------PPMAVIQNIIGECSPPFV 120
           +            NEA P+ N +E+VA    +   V      P +AVI NIIG  SPP+ 
Sbjct: 61  E------------NEA-PSINGDEDVALEVEEVAEVVAPVVIPALAVIMNIIGARSPPWE 120

Query: 121 KQLMKTDVTESQGRLALHKEFVTRNLIPMFNRGENLKNGISVTVYDSEGREYDMIFKFWT 180
           K+L K+DV+E QGRL + KEFVT +L+PMFN  E+   GI VTVY+ EGR+YDM FK W 
Sbjct: 121 KRLTKSDVSEGQGRLIVRKEFVTNHLLPMFNADEDPSEGIDVTVYNGEGRQYDMQFKLWA 180

Query: 181 SKLYVLTKSWNKFYKSNNLTRPGEFISVWMFRHVVNRKLCFAIMRGDAEQP 220
           SKLYVLTK WN FYK+NNLT PG ++++WMFRHV   K+CFA+  G   +P
Sbjct: 181 SKLYVLTKGWNDFYKTNNLTDPGLYVTLWMFRHVETHKICFAVTAGQFGEP 212

[Close]

BLAST of CsGy2G005640 vs. NCBI nr
Match: KAG7023605.1 (putative B3 domain-containing protein, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 173 bits (439), Expect = 3.24e-51
Identity = 78/130 (60.00%), Postives = 98/130 (75.38%), Query Frame = 0


Query: 91  VPPMAVIQNIIGECSPPFVKQLMKTDVTESQGRLALHKEFVTRNLIPMFNRGENLKNGIS 150
           +P +AVI NIIG  SPP+ K+L K+DV+E QGRL + KEFVT +L+PMFN  E+   GI 
Sbjct: 32  IPALAVIMNIIGARSPPWEKRLTKSDVSEGQGRLIVRKEFVTNHLLPMFNADEDPSEGID 91

Query: 151 VTVYDSEGREYDMIFKFWTSKLYVLTKSWNKFYKSNNLTRPGEFISVWMFRHVVNRKLCF 210
           VTVY+ EGR+YDM FK W SKLYVLTK WN FYK+NNLT PG ++++WMFRHV   K+CF
Sbjct: 92  VTVYNGEGRQYDMQFKLWASKLYVLTKGWNDFYKTNNLTEPGLYVTLWMFRHVETHKICF 151

Query: 211 AIMRGDAEQP 220
           A+  G   +P
Sbjct: 152 AVTAGQFGEP 161

[Close]

BLAST of CsGy2G005640 vs. ExPASy TrEMBL
Match: A0A5D3BAS8 (Putative B3 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold78209G00040 PE=4 SV=1)

HSP 1 Score: 319 bits (817), Expect = 5.14e-108
Identity = 167/231 (72.29%), Postives = 182/231 (78.79%), Query Frame = 0


Query: 1   MVKVRYTYNNKIVEKHVYEASLALCHMKNSRCLKPFEKPVTRLNNRFSSSTSIS------ 60
           MVKV Y YNNKIV+K VYEA LALC MK S   +PFE+P     N+F SSTSIS      
Sbjct: 1   MVKVGYIYNNKIVKKEVYEACLALCEMKKSS--EPFEEP-----NQFPSSTSISMVDDQP 60

Query: 61  -ILNKQPPILIERAPVVNEALPNNNNNEN------VAGRDWGRVPPMAVIQNIIGECSPP 120
            ++N+QPPI+ E APVVNEAL NNNNN N      VA RD GR+PPMAVIQNIIGECSPP
Sbjct: 61  PVVNEQPPIVNEHAPVVNEALLNNNNNNNENVAAVVADRDLGRLPPMAVIQNIIGECSPP 120

Query: 121 FVKQLMKTDVTESQGRLALHKEFVTRNLIPMFNRGENLKNGISVTVYDSEGREYDMIFKF 180
           FVKQL KTDVT+SQGRLALHKEFV RNL+PMFN  E L NGISVTVYDSEGREYDM F+ 
Sbjct: 121 FVKQLTKTDVTDSQGRLALHKEFVNRNLVPMFNGDEILTNGISVTVYDSEGREYDMTFRL 180

Query: 181 WTSKLYVLTKSWNKFYKSNNLTRPGEFISVWMFRHVVNRKLCFAIMRGDAE 218
           WTSKLYVLTKSW KFY  N LTRP EFI++WMFRHVVN KLCFAIMRG+ E
Sbjct: 181 WTSKLYVLTKSWKKFYHDNGLTRPDEFITLWMFRHVVNHKLCFAIMRGNVE 224

[Close]

BLAST of CsGy2G005640 vs. ExPASy TrEMBL
Match: A0A0A0L7L0 (TF-B3 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G073910 PE=4 SV=1)

HSP 1 Score: 311 bits (796), Expect = 7.81e-105
Identity = 159/226 (70.35%), Postives = 183/226 (80.97%), Query Frame = 0


Query: 1   MVKVRYTYNNKIVEKHVYEASLALCHMKNSRCLKPFEKPVTRLNNRFSSSTSISILNKQP 60
           MV V YTYNNKIV + VY+ASL L  M  S+ ++PFE+P+ R NN+ SS TS S++N+Q 
Sbjct: 1   MVDVHYTYNNKIVAEDVYKASLILYDMALSKSVEPFEEPIDRFNNQLSS-TSTSLVNEQS 60

Query: 61  PILIERAPVVNEALPNNN----NNENVA-----GRDWGRVPPMAVIQNIIGECSPPFVKQ 120
           P++ E APVVNE LPNN+    NNENVA     GRD GR PPMAVIQNIIGECSPPFVKQ
Sbjct: 61  PVVNEHAPVVNEVLPNNDDDNGNNENVAAAVVVGRDQGRFPPMAVIQNIIGECSPPFVKQ 120

Query: 121 LMKTDVTESQGRLALHKEFVTRNLIPMFNRGENLKNGISVTVYDSEGREYDMIFKFWTSK 180
           L KTDVT++QGRLALHKEFV  NL PMFN  E+L++GISV VYD EGREYDMIFK W SK
Sbjct: 121 LTKTDVTDNQGRLALHKEFVNLNLDPMFNDDEDLEDGISVIVYDIEGREYDMIFKLWASK 180

Query: 181 LYVLTKSWNKFYKSNNLTRPGEFISVWMFRHVVNRKLCFAIMRGDA 217
           LYVLTKSW +FYK+N+LT+PGEFISVWMFRHVV +KLCFAIMRG A
Sbjct: 181 LYVLTKSWKEFYKTNDLTQPGEFISVWMFRHVVTQKLCFAIMRGQA 225

[Close]

BLAST of CsGy2G005640 vs. ExPASy TrEMBL
Match: A0A0A0LC65 (TF-B3 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G609250 PE=4 SV=1)

HSP 1 Score: 262 bits (669), Expect = 5.85e-87
Identity = 126/126 (100.00%), Postives = 126/126 (100.00%), Query Frame = 0


Query: 94  MAVIQNIIGECSPPFVKQLMKTDVTESQGRLALHKEFVTRNLIPMFNRGENLKNGISVTV 153
           MAVIQNIIGECSPPFVKQLMKTDVTESQGRLALHKEFVTRNLIPMFNRGENLKNGISVTV
Sbjct: 1   MAVIQNIIGECSPPFVKQLMKTDVTESQGRLALHKEFVTRNLIPMFNRGENLKNGISVTV 60

Query: 154 YDSEGREYDMIFKFWTSKLYVLTKSWNKFYKSNNLTRPGEFISVWMFRHVVNRKLCFAIM 213
           YDSEGREYDMIFKFWTSKLYVLTKSWNKFYKSNNLTRPGEFISVWMFRHVVNRKLCFAIM
Sbjct: 61  YDSEGREYDMIFKFWTSKLYVLTKSWNKFYKSNNLTRPGEFISVWMFRHVVNRKLCFAIM 120

Query: 214 RGDAEQ 219
           RGDAEQ
Sbjct: 121 RGDAEQ 126

[Close]

BLAST of CsGy2G005640 vs. ExPASy TrEMBL
Match: A0A6J1CTE7 (putative B3 domain-containing protein At4g03170 OS=Momordica charantia OX=3673 GN=LOC111014582 PE=4 SV=1)

HSP 1 Score: 160 bits (404), Expect = 3.66e-45
Identity = 94/233 (40.34%), Postives = 133/233 (57.08%), Query Frame = 0


Query: 9   NNKIVEKHVYEASLALCHMKNS------------------RCLKPFEKPVTR---LNNRF 68
           N K  +  VYEA++ L  M  S                  + +  F+KP  +   +N+  
Sbjct: 6   NKKEEDSEVYEAAMTLYMMSKSNEGSVTRFLPTSRLTTFPQGVTLFKKPKKKRHYINDNV 65

Query: 69  SSSTSISILNKQPPILIERAPVVNEALPNNNNNENVAGRDWGRVPPMAVIQNIIGECSPP 128
            ++ ++++  ++ P       V  EA P+  NN N  G +   +PP+  I+++IG+CS  
Sbjct: 66  HNNNNVNVDEERQPSSSRNKQVNQEAPPDPPNNNN-DGEERRGMPPVPAIRDVIGQCSRA 125

Query: 129 FVKQLMKTDVTESQGRLALHKEFVTRNLIPMFNR---GENLKNGISVTVYDSEGREYDMI 188
           + K+L  +DV E+QGRLA+ KEFVT+ L PMFN     ENL+ GI VTVY+ EGRE+ M 
Sbjct: 126 YEKRLTVSDVAEAQGRLAIGKEFVTKYLAPMFNNKDENENLREGIEVTVYNREGREFGMT 185

Query: 189 FKFWTSKLYVLTKSWNKFYKSNNLTRP--GEFISVWMFRHVVNRKLCFAIMRG 215
           FK W SKLYVL K W  F K+NNLT    GEF+++WMFRH     LCFAI+ G
Sbjct: 186 FKIWASKLYVLMKGWKPFCKANNLTHAHAGEFLTLWMFRHRRTHGLCFAIILG 237

[Close]

BLAST of CsGy2G005640 vs. ExPASy TrEMBL
Match: A0A4Y1RVH6 (AP2/B3-like transcriptional factor family protein OS=Prunus dulcis OX=3755 GN=Prudu_020535 PE=4 SV=1)

HSP 1 Score: 129 bits (324), Expect = 6.51e-33
Identity = 58/122 (47.54%), Postives = 81/122 (66.39%), Query Frame = 0


Query: 91  VPPMAVIQNIIGECSPPFVKQLMKTDVTESQGRLALHKEFVTRNLIPMFNRGENLKNGIS 150
           +PP+  +QN+I +CS PF KQL ++DV E Q RL+++KE V  N++P+   G+NL  GI 
Sbjct: 127 LPPIPSLQNLIQDCSKPFEKQLTRSDVKEDQCRLSMNKEDVEYNIMPLLRNGDNLNEGID 186

Query: 151 VTVYDSEGREYDMIFKFWTSKLYVLTKSWNKFYKSNNLTRPGEFISVWMFRHVVNRKLCF 210
           VT YD  G EY M+FK W +K++VLT  W  F     L    +F+++W+FRHV N  LCF
Sbjct: 187 VTTYDMAGNEYPMVFKIWATKIHVLTGGWKTFCNDLGLVENQDFVTLWVFRHVDNGGLCF 246

Query: 211 AI 212
           AI
Sbjct: 247 AI 248

[Close]

BLAST of CsGy2G005640 vs. TAIR 10
Match: AT4G03170.1 (AP2/B3-like transcriptional factor family protein )

HSP 1 Score: 95.5 bits (236), Expect = 5.7e-20
Identity = 48/109 (44.04%), Postives = 62/109 (56.88%), Query Frame = 0


Query: 105 SPPFVKQLMKTDVTESQGRLALHKEFVTRNLIPMFNRGENLKNGISVTVYDSEGREYDMI 164
           S P  KQLM +DV + Q  L L KE V   ++P     EN   GI V+VY  +G+   M 
Sbjct: 133 SRPIKKQLMSSDVDKDQCMLMLSKEQVKEKMLPFLEDSENPVKGIDVSVYGPDGKVQQME 192

Query: 165 FKFWT-SKLYVLTKSWNKFYKSNNLTRPGEFISVWMFRHVVNRKLCFAI 213
           FK W   K  VLT  W +F +   L+   +F++VWMFRH+  RKLCFAI
Sbjct: 193 FKMWNGDKTPVLTSGWKQFVEDYGLSMTCDFVTVWMFRHIKTRKLCFAI 241

[Close]

BLAST of CsGy2G005640 vs. TAIR 10
Match: AT4G03160.1 (BEST Arabidopsis thaliana protein match is: AP2/B3-like transcriptional factor family protein (TAIR:AT4G03170.1); Has 46 Blast hits to 46 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 8; Fungi - 4; Plants - 29; Viruses - 0; Other Eukaryotes - 5 (source: NCBI BLink). )

HSP 1 Score: 81.6 bits (200), Expect = 8.4e-16
Identity = 41/104 (39.42%), Postives = 61/104 (58.65%), Query Frame = 0


Query: 110 KQLMKTDVTESQGRLALHKEFVTRNLIPMFNRGENL-KNGISVTVYDSEGREYDMIFKFW 169
           +QLM +DV ++Q RL L KE V + ++    + E L   G++V+VY   G  + M+ K W
Sbjct: 67  EQLMDSDVKDNQYRLMLGKEPV-KKMMDALGKTEKLGTKGLNVSVYGPNGENHKMVLKIW 126

Query: 170 TSKLYVLTKSWNKFYKSNNLTRPGEFISVWMFRHVVNRKLCFAI 213
                VLT  W  F KS  L +  +F+++WMFRH   R++CFAI
Sbjct: 127 IKGTPVLTSGWKNFVKSYKLEKHVDFLTIWMFRHKKTREICFAI 169

[Close]

BLAST of CsGy2G005640 vs. TAIR 10
Match: AT1G20600.1 (AP2/B3-like transcriptional factor family protein )

HSP 1 Score: 65.5 bits (158), Expect = 6.3e-11
Identity = 34/93 (36.56%), Postives = 46/93 (49.46%), Query Frame = 0


Query: 105 SPPFVKQLMKTDVTESQGRLALHKEFVTRNLIPMFNRGENLKNGISVTVYDSEGREYDMI 164
           S P  KQLM +DV   Q RL L KE V   ++P     E+   G+ V+VY  +G    M 
Sbjct: 122 SRPIKKQLMSSDVDTDQSRLMLSKEQVKEKMLPFLEESEDPVKGVDVSVYGPDGEVQQMK 181

Query: 165 FKFWT-SKLYVLTKSWNKFYKSNNLTRPGEFIS 197
           FK W   K  VLT  W +F     L +  +F++
Sbjct: 182 FKMWNGDKTPVLTSGWMQFVADYGLLKTSDFVT 214

The following BLAST results are available for this feature:

BLAST of CsGy2G005640 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9ZR14	8.0e-19	44.04	Putative B3 domain-containing protein At4g03170 OS=Arabidopsis thaliana OX=3702 ...	[more]
Q9ZR15	1.2e-14	39.42	Putative B3 domain-containing protein At4g03160 OS=Arabidopsis thaliana OX=3702 ...	[more]
Q9LM90	8.8e-10	36.56	B3 domain-containing protein At1g20600 OS=Arabidopsis thaliana OX=3702 GN=At1g20...	[more]

BLAST of CsGy2G005640 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_031736688.1	1.60e-154	97.31	uncharacterized protein LOC116402065 [Cucumis sativus]	[more]
KAA0043114.1	1.06e-107	72.29	putative B3 domain-containing protein [Cucumis melo var. makuwa] >TYJ96217.1 put...	[more]
KGN56101.1	1.61e-104	70.35	hypothetical protein Csa_010492 [Cucumis sativus]	[more]
KAG6589940.1	5.73e-56	46.32	putative B3 domain-containing protein, partial [Cucurbita argyrosperma subsp. so...	[more]
KAG7023605.1	3.24e-51	60.00	putative B3 domain-containing protein, partial [Cucurbita argyrosperma subsp. ar...	[more]

BLAST of CsGy2G005640 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3BAS8	5.14e-108	72.29	Putative B3 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=...	[more]
A0A0A0L7L0	7.81e-105	70.35	TF-B3 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G073910 PE=4 ...	[more]
A0A0A0LC65	5.85e-87	100.00	TF-B3 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G609250 PE=4 ...	[more]
A0A6J1CTE7	3.66e-45	40.34	putative B3 domain-containing protein At4g03170 OS=Momordica charantia OX=3673 G...	[more]
A0A4Y1RVH6	6.51e-33	47.54	AP2/B3-like transcriptional factor family protein OS=Prunus dulcis OX=3755 GN=Pr...	[more]

BLAST of CsGy2G005640 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G03170.1	5.7e-20	44.04	AP2/B3-like transcriptional factor family protein	[more]
AT4G03160.1	8.4e-16	39.42	BEST Arabidopsis thaliana protein match is: AP2/B3-like transcriptional factor f...	[more]
AT1G20600.1	6.3e-11	36.56	AP2/B3-like transcriptional factor family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (Gy14) v2.1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003340	B3 DNA binding domain	SMART	SM01019	B3_2	coord: 108..216 e-value: 3.1E-7 score: 40.0
IPR003340	B3 DNA binding domain	PFAM	PF02362	B3	coord: 108..214 e-value: 2.2E-9 score: 37.1
IPR003340	B3 DNA binding domain	PROSITE	PS50863	B3	coord: 109..216 score: 9.629154
IPR003340	B3 DNA binding domain	CDD	cd10017	B3_DNA	coord: 106..212 e-value: 7.70072E-16 score: 68.5085
IPR015300	DNA-binding pseudobarrel domain superfamily	GENE3D	2.40.330.10		coord: 100..219 e-value: 1.8E-20 score: 74.7
IPR015300	DNA-binding pseudobarrel domain superfamily	SUPERFAMILY	101936	DNA-binding pseudobarrel domain	coord: 106..203
IPR005508	B3 domain-containing protein At2g31720-like	PANTHER	PTHR31541	B3 DOMAIN PLANT PROTEIN-RELATED	coord: 7..213
None	No IPR available	PANTHER	PTHR31541:SF28	B3 DOMAIN PLANT PROTEIN	coord: 7..213

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsGy2G005640.1	CsGy2G005640.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003677	DNA binding